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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007646 RLG00000008043 RLG00000008044 RLG00000019654 RLG00000023898 RLG00000033256 RLG00000033669 |
| rosa_multiflora | Rmu_sc0001544.1_g000023 Rmu_sc0006181.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00093260 |
| rosa_samantha | Rh1BG212600 Rh2AG404300 Rh2BG397500 Rh3AG108400 Rh5AG213700 Rh5BG212800 Rh5CG236000 Rh5CG236100 Rh5DG217200 Rh5DG217300 Rh6AG116800 Rh6AG116900 Rh6AG509900 Rh6BG110900 Rh6CG108500 Rh6DG098900 Rh6DG207600 Rh6DG510800 Rh7AG206200 Rh7BG210100 Rh7CG183200 Rh7DG213400 |
| rosa_wichuraiana | Rw5G019530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 70 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 9, 41 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 105, 137 |
| AluBI | AGCT | 1 cut(s) | 290 |
| AluI | AGCT | 1 cut(s) | 290 |
| AoxI | GGCC | 1 cut(s) | 138 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 105, 137 |
| AspS9I | GGNCC | 3 cut(s) | 96, 113, 139 |
| AsuC2I | CCSGG | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 1 cut(s) | 145 |
| AvaII | GGWCC | 2 cut(s) | 96, 113 |
| BbsI | GAAGAC | 1 cut(s) | 77 |
| BccI | CCATC | 2 cut(s) | 196, 268 |
| BclI | TGATCA | 1 cut(s) | 150 |
| BcnI | CCSGG | 1 cut(s) | 142 |
| BfaI | CTAG | 1 cut(s) | 287 |
| BlpI | GCTNAGC | 1 cut(s) | 162 |
| Bme1390I | CCNGG | 1 cut(s) | 142 |
| Bme18I | GGWCC | 2 cut(s) | 96, 113 |
| BmgT120I | GGNCC | 3 cut(s) | 96, 113, 139 |
| BmiI | GGNNCC | 3 cut(s) | 97, 114, 279 |
| BmrFI | CCNGG | 1 cut(s) | 142 |
| BpiI | GAAGAC | 1 cut(s) | 77 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 162 |
| BpuEI | CTTGAG | 1 cut(s) | 276 |
| BpuMI | CCSGG | 1 cut(s) | 142 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| BsaWI | WCCGGW | 1 cut(s) | 280 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 216, 246 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseGI | GGATG | 1 cut(s) | 16 |
| BseMII | CTCAG | 2 cut(s) | 153, 231 |
| BseRI | GAGGAG | 1 cut(s) | 257 |
| BshFI | GGCC | 1 cut(s) | 140 |
| BsiSI | CCGG | 2 cut(s) | 142, 281 |
| BslFI | GGGAC | 1 cut(s) | 126 |
| BsmFI | GGGAC | 1 cut(s) | 126 |
| BsnI | GGCC | 1 cut(s) | 140 |
| Bsp143I | GATC | 1 cut(s) | 150 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 162 |
| BspANI | GGCC | 1 cut(s) | 140 |
| BspCNI | CTCAG | 2 cut(s) | 154, 232 |
| BspLI | GGNNCC | 3 cut(s) | 97, 114, 279 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssMI | GATC | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst6I | CTCTTC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 3 cut(s) | 75, 162, 240 |
| BstEII | GGTNACC | 1 cut(s) | 30 |
| BstF5I | GGATG | 1 cut(s) | 16 |
| BstKTI | GATC | 1 cut(s) | 153 |
| BstMBI | GATC | 1 cut(s) | 150 |
| BstPI | GGTNACC | 1 cut(s) | 30 |
| BstSCI | CCNGG | 1 cut(s) | 140 |
| BstV2I | GAAGAC | 1 cut(s) | 77 |
| BsuRI | GGCC | 1 cut(s) | 140 |
| BtsCI | GGATG | 1 cut(s) | 16 |
| Cfr13I | GGNCC | 3 cut(s) | 96, 113, 139 |
| CviJI | RGCY | 4 cut(s) | 140, 166, 278, 290 |
| CviKI_1 | RGCY | 4 cut(s) | 140, 166, 278, 290 |
| DdeI | CTNAG | 3 cut(s) | 75, 162, 240 |
| DpnI | GATC | 1 cut(s) | 152 |
| DpnII | GATC | 1 cut(s) | 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 1 cut(s) | 12 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco47I | GGWCC | 2 cut(s) | 96, 113 |
| Eco91I | GGTNACC | 1 cut(s) | 30 |
| EcoO65I | GGTNACC | 1 cut(s) | 30 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaiI | YATR | 1 cut(s) | 86 |
| FaqI | GGGAC | 1 cut(s) | 126 |
| FbaI | TGATCA | 1 cut(s) | 150 |
| FokI | GGATG | 1 cut(s) | 23 |
| FspBI | CTAG | 1 cut(s) | 287 |
| HaeIII | GGCC | 1 cut(s) | 140 |
| HapII | CCGG | 2 cut(s) | 142, 281 |
| HinfI | GANTC | 2 cut(s) | 236, 256 |
| HpaII | CCGG | 2 cut(s) | 142, 281 |
| HphI | GGTGA | 1 cut(s) | 145 |
| Hpy188I | TCNGA | 1 cut(s) | 241 |
| Hpy188III | TCNNGA | 1 cut(s) | 293 |
| HpyF3I | CTNAG | 3 cut(s) | 75, 162, 240 |
| Ksp22I | TGATCA | 1 cut(s) | 150 |
| Kzo9I | GATC | 1 cut(s) | 150 |
| LmnI | GCTCC | 1 cut(s) | 283 |
| LpnPI | CCDG | 4 cut(s) | 155, 164, 210, 294 |
| MaeI | CTAG | 1 cut(s) | 287 |
| MaeIII | GTNAC | 1 cut(s) | 30 |
| MalI | GATC | 1 cut(s) | 152 |
| MboI | GATC | 1 cut(s) | 150 |
| MboII | GAAGA | 3 cut(s) | 29, 82, 157 |
| MluCI | AATT | 1 cut(s) | 191 |
| MlyI | GAGTC | 2 cut(s) | 245, 265 |
| MnlI | CCTC | 5 cut(s) | 13, 223, 235, 238, 270 |
| MspI | CCGG | 2 cut(s) | 142, 281 |
| MspR9I | CCNGG | 1 cut(s) | 142 |
| NciI | CCSGG | 1 cut(s) | 142 |
| NdeII | GATC | 1 cut(s) | 150 |
| NlaIV | GGNNCC | 3 cut(s) | 97, 114, 279 |
| PleI | GAGTC | 2 cut(s) | 244, 264 |
| PpsI | GAGTC | 2 cut(s) | 244, 264 |
| PspEI | GGTNACC | 1 cut(s) | 30 |
| PspN4I | GGNNCC | 3 cut(s) | 97, 114, 279 |
| PspPI | GGNCC | 3 cut(s) | 96, 113, 139 |
| Sau3AI | GATC | 1 cut(s) | 150 |
| Sau96I | GGNCC | 3 cut(s) | 96, 113, 139 |
| SchI | GAGTC | 2 cut(s) | 245, 265 |
| ScrFI | CCNGG | 1 cut(s) | 142 |
| SetI | ASST | 5 cut(s) | 37, 183, 234, 249, 292 |
| SgeI | CNNG | 7 cut(s) | 19, 112, 153, 154, 191, 209, 293 |
| SinI | GGWCC | 2 cut(s) | 96, 113 |
| SmlI | CTYRAG | 1 cut(s) | 291 |
| SmoI | CTYRAG | 1 cut(s) | 291 |
| Sse9I | AATT | 1 cut(s) | 191 |
| SspMI | CTAG | 1 cut(s) | 287 |
| StyD4I | CCNGG | 1 cut(s) | 140 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TasI | AATT | 1 cut(s) | 191 |
| TspDTI | ATGAA | 2 cut(s) | 189, 204 |
| VpaK11BI | GGWCC | 2 cut(s) | 96, 113 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 106 |
| XspI | CTAG | 1 cut(s) | 287 |