60S ribosomal Protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0404281 RchiOBHm_Chr4g0405601 RchiOBHm_Chr4g0416011 RchiOBHm_Chr6g0272841 |
| rosa_multiflora | Rmu_sc0000272.1_g000010 Rmu_sc0000533.1_g000058 Rmu_sc0000683.1_g000005 Rmu_sc0002798.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00005510 Rroxscaffold_1G00054810 Rroxscaffold_1G00055880 Rroxscaffold_2G00087770 |
| rosa_rugosa | Rorug02G0232900 Rorug04G0335200 |
| rosa_samantha | Rh1AG115100 Rh1AG115200 Rh1BG108300 Rh1CG111100 Rh1CG146400 Rh1DG119800 Rh1DG119900 Rh2AG175000 Rh2CG179500 Rh2DG181400 Rh4AG148900 Rh4AG161700 Rh4CG155600 Rh5CG070700 Rh5DG564800 Rh6DG180600 Rh7AG378500 Rh7BG442400 |
| rosa_wichuraiana | Rw7G037910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 113 |
| AgsI | TTSAA | 1 cut(s) | 28 |
| AluBI | AGCT | 2 cut(s) | 79, 138 |
| AluI | AGCT | 2 cut(s) | 79, 138 |
| AlwI | GGATC | 1 cut(s) | 113 |
| AspS9I | GGNCC | 1 cut(s) | 19 |
| AvaII | GGWCC | 1 cut(s) | 19 |
| BciVI | GTATCC | 1 cut(s) | 107 |
| BfuI | GTATCC | 1 cut(s) | 107 |
| Bme18I | GGWCC | 1 cut(s) | 19 |
| BmgT120I | GGNCC | 1 cut(s) | 19 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| BsaWI | WCCGGW | 1 cut(s) | 21 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BsiSI | CCGG | 1 cut(s) | 22 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| Bsp19I | CCATGG | 1 cut(s) | 100 |
| BspPI | GGATC | 1 cut(s) | 113 |
| BspQI | GCTCTTC | 1 cut(s) | 128 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| BssMI | GATC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 100 |
| Bst6I | CTCTTC | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 1 cut(s) | 140 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstDSI | CCRYGG | 1 cut(s) | 100 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BsuI | GTATCC | 1 cut(s) | 107 |
| BtgI | CCRYGG | 1 cut(s) | 100 |
| Cac8I | GCNNGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 19 |
| CviAII | CATG | 1 cut(s) | 101 |
| CviJI | RGCY | 4 cut(s) | 43, 67, 79, 138 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 67, 79, 138 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 1 cut(s) | 128 |
| EarI | CTCTTC | 1 cut(s) | 128 |
| Eco130I | CCWWGG | 1 cut(s) | 100 |
| Eco47I | GGWCC | 1 cut(s) | 19 |
| EcoT14I | CCWWGG | 1 cut(s) | 100 |
| ErhI | CCWWGG | 1 cut(s) | 100 |
| FaeI | CATG | 1 cut(s) | 104 |
| FaiI | YATR | 2 cut(s) | 60, 102 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 122 |
| FatI | CATG | 1 cut(s) | 100 |
| HapII | CCGG | 1 cut(s) | 22 |
| Hin1II | CATG | 1 cut(s) | 104 |
| HindIII | AAGCTT | 1 cut(s) | 77 |
| HinfI | GANTC | 2 cut(s) | 54, 71 |
| HpaII | CCGG | 1 cut(s) | 22 |
| HpyCH4V | TGCA | 1 cut(s) | 142 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 1 cut(s) | 104 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LguI | GCTCTTC | 1 cut(s) | 128 |
| LpnPI | CCDG | 2 cut(s) | 35, 81 |
| MalI | GATC | 1 cut(s) | 120 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 1 cut(s) | 145 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MnlI | CCTC | 1 cut(s) | 44 |
| MspI | CCGG | 1 cut(s) | 22 |
| NcoI | CCATGG | 1 cut(s) | 100 |
| NdeII | GATC | 1 cut(s) | 118 |
| NlaIII | CATG | 1 cut(s) | 104 |
| PciSI | GCTCTTC | 1 cut(s) | 128 |
| PfeI | GAWTC | 1 cut(s) | 54 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| PspPI | GGNCC | 1 cut(s) | 19 |
| SapI | GCTCTTC | 1 cut(s) | 128 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| Sau96I | GGNCC | 1 cut(s) | 19 |
| SchI | GAGTC | 1 cut(s) | 80 |
| SetI | ASST | 2 cut(s) | 81, 140 |
| SgeI | CNNG | 6 cut(s) | 34, 44, 51, 76, 80, 113 |
| SinI | GGWCC | 1 cut(s) | 19 |
| StyI | CCWWGG | 1 cut(s) | 100 |
| TfiI | GAWTC | 1 cut(s) | 54 |
| VpaK11BI | GGWCC | 1 cut(s) | 19 |