No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0404281 RchiOBHm_Chr4g0405601 RchiOBHm_Chr4g0416011 RchiOBHm_Chr6g0272841 |
| rosa_multiflora | Rmu_sc0000272.1_g000010 Rmu_sc0000533.1_g000058 Rmu_sc0000683.1_g000005 Rmu_sc0002798.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00005510 Rroxscaffold_1G00054810 Rroxscaffold_1G00055880 Rroxscaffold_2G00087770 |
| rosa_rugosa | Rorug02G0232900 Rorug04G0335200 |
| rosa_samantha | Rh1AG115100 Rh1AG115200 Rh1BG108300 Rh1CG111100 Rh1CG146400 Rh1DG119800 Rh1DG119900 Rh2AG175000 Rh2CG179500 Rh2DG181400 Rh4AG148900 Rh4AG161700 Rh4CG155600 Rh5CG070700 Rh5DG564800 Rh6DG180600 Rh7AG378500 Rh7BG442400 |
| rosa_wichuraiana | Rw7G037910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 11 |
| AciI | CCGC | 1 cut(s) | 219 |
| AcsI | RAATTY | 1 cut(s) | 93 |
| AfaI | GTAC | 1 cut(s) | 269 |
| AflIII | ACRYGT | 1 cut(s) | 136 |
| AluBI | AGCT | 1 cut(s) | 239 |
| AluI | AGCT | 1 cut(s) | 239 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 1 cut(s) | 49 |
| ApoI | RAATTY | 1 cut(s) | 93 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 238 |
| AsuHPI | GGTGA | 1 cut(s) | 47 |
| AsuII | TTCGAA | 1 cut(s) | 242 |
| BbvI | GCAGC | 1 cut(s) | 61 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfmI | CTRYAG | 1 cut(s) | 82 |
| BisI | GCNGC | 1 cut(s) | 50 |
| BlsI | GCNGC | 1 cut(s) | 51 |
| BoxI | GACNNNNGTC | 1 cut(s) | 154 |
| Bpu14I | TTCGAA | 1 cut(s) | 242 |
| BsaJI | CCNNGG | 1 cut(s) | 60 |
| Bse3DI | GCAATG | 1 cut(s) | 270 |
| BseDI | CCNNGG | 1 cut(s) | 60 |
| BseMI | GCAATG | 1 cut(s) | 270 |
| BseXI | GCAGC | 1 cut(s) | 61 |
| Bsh1285I | CGRYCG | 1 cut(s) | 158 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BsiEI | CGRYCG | 1 cut(s) | 158 |
| BslFI | GGGAC | 1 cut(s) | 162 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 162 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp119I | TTCGAA | 1 cut(s) | 242 |
| Bsp1407I | TGTACA | 1 cut(s) | 267 |
| BspACI | CCGC | 1 cut(s) | 219 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspMAI | CTGCAG | 1 cut(s) | 86 |
| BspT104I | TTCGAA | 1 cut(s) | 242 |
| BsrDI | GCAATG | 1 cut(s) | 270 |
| BsrGI | TGTACA | 1 cut(s) | 267 |
| BssECI | CCNNGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 2 cut(s) | 61, 272 |
| BstAUI | TGTACA | 1 cut(s) | 267 |
| BstBI | TTCGAA | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 1 cut(s) | 173 |
| BstDSI | CCRYGG | 1 cut(s) | 60 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMCI | CGRYCG | 1 cut(s) | 158 |
| BstNSI | RCATGY | 1 cut(s) | 140 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 154 |
| BstSFI | CTRYAG | 1 cut(s) | 82 |
| BstV1I | GCAGC | 1 cut(s) | 61 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtgI | CCRYGG | 1 cut(s) | 60 |
| BtsI | GCAGTG | 1 cut(s) | 91 |
| BtsIMutI | CAGTG | 2 cut(s) | 91, 277 |
| Cac8I | GCNNGC | 1 cut(s) | 173 |
| Csp6I | GTAC | 1 cut(s) | 268 |
| CviAII | CATG | 6 cut(s) | 22, 137, 168, 193, 254, 281 |
| CviJI | RGCY | 3 cut(s) | 52, 175, 239 |
| CviKI_1 | RGCY | 3 cut(s) | 52, 175, 239 |
| CviQI | GTAC | 1 cut(s) | 268 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 11 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 11 |
| FaeI | CATG | 6 cut(s) | 25, 140, 171, 196, 257, 284 |
| FaiI | YATR | 7 cut(s) | 23, 138, 169, 194, 227, 255, 282 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 37, 69 |
| FaqI | GGGAC | 1 cut(s) | 162 |
| FatI | CATG | 6 cut(s) | 21, 136, 167, 192, 253, 280 |
| Fnu4HI | GCNGC | 1 cut(s) | 50 |
| Fsp4HI | GCNGC | 1 cut(s) | 50 |
| GluI | GCNGC | 1 cut(s) | 50 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 6 cut(s) | 25, 140, 171, 196, 257, 284 |
| HindIII | AAGCTT | 1 cut(s) | 237 |
| HphI | GGTGA | 1 cut(s) | 47 |
| Hpy188I | TCNGA | 2 cut(s) | 160, 233 |
| HpyAV | CCTTC | 1 cut(s) | 63 |
| HpyCH4III | ACNGT | 2 cut(s) | 61, 272 |
| HpyCH4V | TGCA | 5 cut(s) | 72, 84, 171, 263, 275 |
| Hsp92II | CATG | 6 cut(s) | 25, 140, 171, 196, 257, 284 |
| LpnPI | CCDG | 3 cut(s) | 157, 165, 188 |
| Lsp1109I | GCAGC | 1 cut(s) | 61 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MluCI | AATT | 1 cut(s) | 93 |
| MmeI | TCCRAC | 1 cut(s) | 138 |
| MnlI | CCTC | 2 cut(s) | 20, 123 |
| MroXI | GAANNNNTTC | 1 cut(s) | 238 |
| MslI | CAYNNNNRTG | 1 cut(s) | 258 |
| NlaIII | CATG | 6 cut(s) | 25, 140, 171, 196, 257, 284 |
| NmuCI | GTSAC | 1 cut(s) | 116 |
| NspI | RCATGY | 1 cut(s) | 140 |
| NspV | TTCGAA | 1 cut(s) | 242 |
| PciI | ACATGT | 1 cut(s) | 136 |
| PdmI | GAANNNNTTC | 1 cut(s) | 238 |
| PkrI | GCNGC | 1 cut(s) | 51 |
| PscI | ACATGT | 1 cut(s) | 136 |
| PshAI | GACNNNNGTC | 1 cut(s) | 154 |
| PstI | CTGCAG | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 269 |
| RsaNI | GTAC | 1 cut(s) | 268 |
| RseI | CAYNNNNRTG | 1 cut(s) | 258 |
| SatI | GCNGC | 1 cut(s) | 50 |
| SetI | ASST | 1 cut(s) | 241 |
| SfcI | CTRYAG | 1 cut(s) | 82 |
| SfuI | TTCGAA | 1 cut(s) | 242 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 258 |
| Sse9I | AATT | 1 cut(s) | 93 |
| SsiI | CCGC | 1 cut(s) | 219 |
| SspI | AATATT | 1 cut(s) | 287 |
| TaaI | ACNGT | 2 cut(s) | 61, 272 |
| TaqI | TCGA | 1 cut(s) | 242 |
| TaqII | GACCGA | 1 cut(s) | 144 |
| TasI | AATT | 1 cut(s) | 93 |
| TatI | WGTACW | 1 cut(s) | 267 |
| TscAI | CASTG | 2 cut(s) | 91, 277 |
| TseFI | GTSAC | 1 cut(s) | 116 |
| TseI | GCWGC | 1 cut(s) | 49 |
| Tsp45I | GTSAC | 1 cut(s) | 116 |
| TspDTI | ATGAA | 1 cut(s) | 86 |
| TspRI | CASTG | 2 cut(s) | 91, 277 |
| XapI | RAATTY | 1 cut(s) | 93 |
| XceI | RCATGY | 1 cut(s) | 140 |
| XmnI | GAANNNNTTC | 1 cut(s) | 238 |