Rh2CG295600

Cytosolic domain of 10TM putative phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001559
Physical Location & Seq
Reverse (-)
33924782 .. 33926308
1527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG295600.1

Sequence Viewer

Length: 459 bp
ATGGAGATTTCCTTTCTCCCTCTCTCACTCTTCCTCAGGCCCGAGCCTCACTCCATGTACTGCTTCCGTCGCTGCAACTCCAACGCTAGCCTCCGGCCATTGGCATATGGTAAAACCTATTATGAGGAGACCCTGACTGTTACTTTTGGTTTCCCAAGGTTATGGGTTCATTTTTGTGCAGCATATATTTTCAGTGCAGTCGTCTGCTATCTTCTTTACAATGAGTACAATTATATCTCATCAAGAAGAATTGCTCACTTCTATTCATCCAAACCTCAGCCTAATCAGTTCACAGTATTGGTTCATGGTATTCCTGTCCTATCTGGGAGCAGCTGCAGTGAAACCGTTGAAAAATTCTTTACAGAATATTACTCTTATACTTATCTTTCACACTCGTTGGTTCGTCGAACTAGCAAACTCCAACGTCTCACTGTAAGCCTCAGCATGATAATTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

152

Amino Acids

17.74

Weight (kDa)

9.13

Isoelectric Point (pI)

48.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHM7_cyt PF14703 96 - 143 1.6e-06 Cytosolic domain of 10TM putative phosphate transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 95
AcsI RAATTY 1 cut(s) 353
AfaI GTAC 2 cut(s) 59, 227
AfiI CCNNNNNNNGG 1 cut(s) 100
AgsI TTSAA 1 cut(s) 350
AluBI AGCT 1 cut(s) 333
AluI AGCT 1 cut(s) 333
Alw26I GTCTC 2 cut(s) 122, 431
Ama87I CYCGRG 1 cut(s) 41
AoxI GGCC 2 cut(s) 38, 95
ApeKI GCWGC 4 cut(s) 72, 179, 330, 333
ApoI RAATTY 1 cut(s) 353
AspS9I GGNCC 1 cut(s) 39
AsuNHI GCTAGC 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 41
AxyI CCTNAGG 1 cut(s) 35
BbvCI CCTCAGC 2 cut(s) 276, 440
BbvI GCAGC 4 cut(s) 59, 191, 320, 342
BcoDI GTCTC 2 cut(s) 122, 431
BfaI CTAG 2 cut(s) 87, 411
BfmI CTRYAG 1 cut(s) 334
BisI GCNGC 4 cut(s) 73, 180, 331, 334
BlsI GCNGC 4 cut(s) 74, 181, 332, 335
BmeT110I CYCGRG 1 cut(s) 41
BmgT120I GGNCC 1 cut(s) 39
BmtI GCTAGC 1 cut(s) 90
BplI GAGNNNNNCTC 2 cut(s) 35, 67
Bpu10I CCTNAGC 2 cut(s) 276, 440
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 1 cut(s) 155
Bsc4I CCNNNNNNNGG 1 cut(s) 100
Bse21I CCTNAGG 1 cut(s) 35
BseDI CCNNGG 1 cut(s) 155
BseGI GGATG 1 cut(s) 266
BseLI CCNNNNNNNGG 1 cut(s) 100
BseMII CTCAG 3 cut(s) 49, 290, 454
BseRI GAGGAG 1 cut(s) 140
BseXI GCAGC 4 cut(s) 59, 191, 320, 342
BsgI GTGCAG 2 cut(s) 198, 216
BshFI GGCC 2 cut(s) 40, 97
BsiHKCI CYCGRG 1 cut(s) 41
BsiSI CCGG 1 cut(s) 94
BslI CCNNNNNNNGG 1 cut(s) 100
BsmAI GTCTC 2 cut(s) 122, 431
BsmBI CGTCTC 1 cut(s) 431
BsnI GGCC 2 cut(s) 40, 97
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 1 cut(s) 41
BspANI GGCC 2 cut(s) 40, 97
BspCNI CTCAG 3 cut(s) 48, 289, 453
BspMAI CTGCAG 1 cut(s) 338
BspOI GCTAGC 1 cut(s) 90
BspTNI GGTCTC 1 cut(s) 122
BssECI CCNNGG 1 cut(s) 155
BssT1I CCWWGG 1 cut(s) 155
Bst4CI ACNGT 4 cut(s) 139, 295, 346, 433
Bst6I CTCTTC 1 cut(s) 35
BstC8I GCNNGC 1 cut(s) 88
BstDEI CTNAG 3 cut(s) 35, 276, 440
BstF5I GGATG 1 cut(s) 266
BstMAI GTCTC 2 cut(s) 122, 431
BstMWI GCNNNNNNNGC 1 cut(s) 69
BstSFI CTRYAG 1 cut(s) 334
BstV1I GCAGC 4 cut(s) 59, 191, 320, 342
BstXI CCANNNNNNTGG 1 cut(s) 162
Bsu36I CCTNAGG 1 cut(s) 35
BsuRI GGCC 2 cut(s) 40, 97
BtsCI GGATG 1 cut(s) 266
BtsI GCAGTG 1 cut(s) 343
BtsIMutI CAGTG 3 cut(s) 199, 343, 429
Cac8I GCNNGC 1 cut(s) 88
Cfr13I GGNCC 1 cut(s) 39
Csp6I GTAC 2 cut(s) 58, 226
CviAII CATG 3 cut(s) 55, 305, 445
CviJI RGCY 7 cut(s) 40, 46, 90, 97, 280, 333, 438
CviKI_1 RGCY 7 cut(s) 40, 46, 90, 97, 280, 333, 438
CviQI GTAC 2 cut(s) 58, 226
DdeI CTNAG 3 cut(s) 35, 276, 440
EaeI YGGCCR 1 cut(s) 95
Eam1104I CTCTTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 35
Eco130I CCWWGG 1 cut(s) 155
Eco31I GGTCTC 1 cut(s) 122
Eco81I CCTNAGG 1 cut(s) 35
Eco88I CYCGRG 1 cut(s) 41
EcoT14I CCWWGG 1 cut(s) 155
ErhI CCWWGG 1 cut(s) 155
Esp3I CGTCTC 1 cut(s) 431
FaeI CATG 3 cut(s) 58, 308, 448
FatI CATG 3 cut(s) 54, 304, 444
FauNDI CATATG 1 cut(s) 106
Fnu4HI GCNGC 4 cut(s) 73, 180, 331, 334
FokI GGATG 1 cut(s) 253
Fsp4HI GCNGC 4 cut(s) 73, 180, 331, 334
FspBI CTAG 2 cut(s) 87, 411
GluI GCNGC 4 cut(s) 73, 180, 331, 334
HaeIII GGCC 2 cut(s) 40, 97
HapII CCGG 1 cut(s) 94
Hin1II CATG 3 cut(s) 58, 308, 448
HpaII CCGG 1 cut(s) 94
Hpy166II GTNNAC 1 cut(s) 291
Hpy188III TCNNGA 1 cut(s) 243
Hpy8I GTNNAC 1 cut(s) 291
Hpy99I CGWCG 2 cut(s) 72, 408
HpyCH4III ACNGT 4 cut(s) 139, 295, 346, 433
HpyCH4IV ACGT 1 cut(s) 424
HpyCH4V TGCA 4 cut(s) 75, 179, 197, 336
HpyF10VI GCNNNNNNNGC 1 cut(s) 69
HpyF3I CTNAG 3 cut(s) 35, 276, 440
HpySE526I ACGT 1 cut(s) 424
Hsp92II CATG 3 cut(s) 58, 308, 448
LmnI GCTCC 1 cut(s) 327
LpnPI CCDG 5 cut(s) 22, 107, 146, 309, 327
Lsp1109I GCAGC 4 cut(s) 59, 191, 320, 342
MaeI CTAG 2 cut(s) 87, 411
MaeII ACGT 1 cut(s) 424
MaeIII GTNAC 1 cut(s) 139
MboII GAAGA 3 cut(s) 22, 203, 258
MluCI AATT 4 cut(s) 229, 249, 353, 450
MmeI TCCRAC 2 cut(s) 105, 445
MnlI CCTC 7 cut(s) 30, 44, 57, 101, 118, 285, 449
MslI CAYNNNNRTG 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 333
MspI CCGG 1 cut(s) 94
MwoI GCNNNNNNNGC 1 cut(s) 69
NdeI CATATG 1 cut(s) 106
NheI GCTAGC 1 cut(s) 86
NlaIII CATG 3 cut(s) 58, 308, 448
PkrI GCNGC 4 cut(s) 74, 181, 332, 335
PspPI GGNCC 1 cut(s) 39
PstI CTGCAG 1 cut(s) 338
PvuII CAGCTG 1 cut(s) 333
RsaI GTAC 2 cut(s) 59, 227
RsaNI GTAC 2 cut(s) 58, 226
RseI CAYNNNNRTG 1 cut(s) 174
SatI GCNGC 4 cut(s) 73, 180, 331, 334
Sau96I GGNCC 1 cut(s) 39
SetI ASST 5 cut(s) 119, 161, 277, 335, 427
SfcI CTRYAG 1 cut(s) 334
SmiMI CAYNNNNRTG 1 cut(s) 174
Sse9I AATT 4 cut(s) 229, 249, 353, 450
SspI AATATT 1 cut(s) 368
SspMI CTAG 2 cut(s) 87, 411
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 4 cut(s) 139, 295, 346, 433
TaiI ACGT 1 cut(s) 427
TaqI TCGA 1 cut(s) 406
TasI AATT 4 cut(s) 229, 249, 353, 450
TatI WGTACW 2 cut(s) 57, 225
TscAI CASTG 3 cut(s) 199, 343, 436
TseI GCWGC 4 cut(s) 72, 179, 330, 333
TspDTI ATGAA 4 cut(s) 158, 255, 293, 444
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 3 cut(s) 199, 343, 436
XapI RAATTY 1 cut(s) 353
XspI CTAG 2 cut(s) 87, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.