U4 U6 small nuclear ribonucleoprotein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 360 |
| AciI | CCGC | 2 cut(s) | 6, 286 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 158 |
| AgsI | TTSAA | 2 cut(s) | 19, 158 |
| AluBI | AGCT | 3 cut(s) | 40, 127, 316 |
| AluI | AGCT | 3 cut(s) | 40, 127, 316 |
| AoxI | GGCC | 2 cut(s) | 3, 53 |
| AspS9I | GGNCC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 2 cut(s) | 173, 266 |
| BfmI | CTRYAG | 1 cut(s) | 241 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 1 cut(s) | 53 |
| BmrI | ACTGGG | 1 cut(s) | 81 |
| BmsI | GCATC | 2 cut(s) | 99, 154 |
| BmuI | ACTGGG | 1 cut(s) | 81 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 158 |
| Bse1I | ACTGG | 1 cut(s) | 76 |
| Bse3DI | GCAATG | 1 cut(s) | 415 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseMI | GCAATG | 1 cut(s) | 415 |
| BseNI | ACTGG | 1 cut(s) | 76 |
| Bsh1285I | CGRYCG | 1 cut(s) | 286 |
| BshFI | GGCC | 2 cut(s) | 5, 55 |
| BsiEI | CGRYCG | 1 cut(s) | 286 |
| BslFI | GGGAC | 1 cut(s) | 39 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BsmFI | GGGAC | 1 cut(s) | 39 |
| BsnI | GGCC | 2 cut(s) | 5, 55 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspACI | CCGC | 2 cut(s) | 6, 286 |
| BspANI | GGCC | 2 cut(s) | 5, 55 |
| BsrDI | GCAATG | 1 cut(s) | 415 |
| BsrI | ACTGG | 1 cut(s) | 76 |
| BssMI | GATC | 1 cut(s) | 63 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 269 |
| BstC8I | GCNNGC | 1 cut(s) | 178 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 156 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMCI | CGRYCG | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 173, 269, 417 |
| BstNSI | RCATGY | 1 cut(s) | 263 |
| BstSFI | CTRYAG | 1 cut(s) | 241 |
| BsuRI | GGCC | 2 cut(s) | 5, 55 |
| Cac8I | GCNNGC | 1 cut(s) | 178 |
| Cfr13I | GGNCC | 1 cut(s) | 53 |
| CviAII | CATG | 4 cut(s) | 181, 260, 269, 342 |
| CviJI | RGCY | 9 cut(s) | 5, 40, 55, 127, 143, 311, 316, 385, 411 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 40, 55, 127, 143, 311, 316, 385, 411 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 156 |
| FaeI | CATG | 4 cut(s) | 184, 263, 272, 345 |
| FaiI | YATR | 9 cut(s) | 23, 182, 208, 261, 270, 327, 343, 360, 365 |
| FaqI | GGGAC | 1 cut(s) | 39 |
| FatI | CATG | 4 cut(s) | 180, 259, 268, 341 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| GluI | GCNGC | 1 cut(s) | 6 |
| HaeIII | GGCC | 2 cut(s) | 5, 55 |
| Hin1II | CATG | 4 cut(s) | 184, 263, 272, 345 |
| HinfI | GANTC | 2 cut(s) | 80, 102 |
| HphI | GGTGA | 2 cut(s) | 173, 266 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 97, 283 |
| Hpy188III | TCNNGA | 2 cut(s) | 67, 232 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyAV | CCTTC | 2 cut(s) | 152, 374 |
| HpyCH4V | TGCA | 2 cut(s) | 176, 263 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 173, 269, 417 |
| Hsp92II | CATG | 4 cut(s) | 184, 263, 272, 345 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LmnI | GCTCC | 2 cut(s) | 184, 321 |
| LpnPI | CCDG | 6 cut(s) | 57, 153, 165, 290, 361, 382 |
| LweI | GCATC | 2 cut(s) | 99, 154 |
| MaeIII | GTNAC | 1 cut(s) | 392 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MmeI | TCCRAC | 1 cut(s) | 306 |
| MnlI | CCTC | 1 cut(s) | 247 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 173, 269, 417 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 4 cut(s) | 184, 263, 272, 345 |
| NmuCI | GTSAC | 1 cut(s) | 392 |
| NspI | RCATGY | 1 cut(s) | 263 |
| PfeI | GAWTC | 2 cut(s) | 80, 102 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| PsiI | TTATAA | 1 cut(s) | 360 |
| PspPI | GGNCC | 1 cut(s) | 53 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| Sau96I | GGNCC | 1 cut(s) | 53 |
| SetI | ASST | 6 cut(s) | 42, 120, 129, 163, 318, 370 |
| SfaNI | GCATC | 2 cut(s) | 99, 154 |
| SfcI | CTRYAG | 1 cut(s) | 241 |
| SsiI | CCGC | 2 cut(s) | 6, 286 |
| TaqI | TCGA | 3 cut(s) | 12, 68, 78 |
| TaqII | GACCGA | 1 cut(s) | 114 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 2 cut(s) | 80, 102 |
| TseFI | GTSAC | 1 cut(s) | 392 |
| Tsp45I | GTSAC | 1 cut(s) | 392 |
| TspDTI | ATGAA | 3 cut(s) | 94, 153, 195 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 156 |
| XceI | RCATGY | 1 cut(s) | 263 |