Rh2DG576900

U4 U6 small nuclear ribonucleoprotein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
80709835 .. 80712064
2230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG576900.1

Sequence Viewer

Length: 258 bp
ATGGCACTTCTGTTTTTGGAAAGCATCACTAATGCAACAGCAGCAACTTCAACTTTAACTGAATTTCAAAACAAGCACTCACATGCCAATGTTCCTGTTGAAGGGGATGCTGGTGTTGCAAACATGGAGCAAGATGTCAATGGGGACTTGGCAAACTTAAAGACACTTAACTATGATGATCTGGATATTGTTTCAAAATTGCAAAAATCACAAAGCTTTGCTGATATAATGCAGGTGATTCATATTTTCTACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

9.36

Weight (kDa)

4.45

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 223
Acc36I ACCTGC 1 cut(s) 223
AcsI RAATTY 1 cut(s) 62
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 4 cut(s) 51, 68, 101, 195
AluBI AGCT 1 cut(s) 216
AluI AGCT 1 cut(s) 216
ApeKI GCWGC 1 cut(s) 41
ApoI RAATTY 1 cut(s) 62
AsuHPI GGTGA 1 cut(s) 247
BbvI GCAGC 1 cut(s) 53
BfuAI ACCTGC 1 cut(s) 223
BisI GCNGC 1 cut(s) 42
BlsI GCNGC 1 cut(s) 43
BmsI GCATC 2 cut(s) 33, 97
Bsc4I CCNNNNNNNGG 1 cut(s) 101
BseGI GGATG 1 cut(s) 112
BseLI CCNNNNNNNGG 1 cut(s) 101
BseXI GCAGC 1 cut(s) 53
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 101
BsmFI GGGAC 1 cut(s) 158
Bsp143I GATC 1 cut(s) 178
BspMI ACCTGC 1 cut(s) 223
BssMI GATC 1 cut(s) 178
BstENI CCTNNNNNAGG 1 cut(s) 99
BstF5I GGATG 1 cut(s) 112
BstKTI GATC 1 cut(s) 181
BstMBI GATC 1 cut(s) 178
BstMWI GCNNNNNNNGC 2 cut(s) 41, 116
BstNSI RCATGY 1 cut(s) 86
BstV1I GCAGC 1 cut(s) 53
BtsCI GGATG 1 cut(s) 112
BveI ACCTGC 1 cut(s) 223
CviAII CATG 2 cut(s) 83, 124
CviJI RGCY 1 cut(s) 216
CviKI_1 RGCY 1 cut(s) 216
DpnI GATC 1 cut(s) 180
DpnII GATC 1 cut(s) 178
EcoNI CCTNNNNNAGG 1 cut(s) 99
FaeI CATG 2 cut(s) 86, 127
FaiI YATR 5 cut(s) 84, 125, 174, 227, 243
FaqI GGGAC 1 cut(s) 158
FatI CATG 2 cut(s) 82, 123
Fnu4HI GCNGC 1 cut(s) 42
FokI GGATG 1 cut(s) 119
Fsp4HI GCNGC 1 cut(s) 42
GluI GCNGC 1 cut(s) 42
Hin1II CATG 2 cut(s) 86, 127
HindIII AAGCTT 1 cut(s) 214
HinfI GANTC 1 cut(s) 238
HphI GGTGA 1 cut(s) 247
Hpy188III TCNNGA 1 cut(s) 182
HpyAV CCTTC 1 cut(s) 95
HpyCH4V TGCA 4 cut(s) 35, 119, 202, 232
HpyF10VI GCNNNNNNNGC 2 cut(s) 41, 116
Hsp92II CATG 2 cut(s) 86, 127
Kzo9I GATC 1 cut(s) 178
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 4 cut(s) 96, 108, 167, 218
Lsp1109I GCAGC 1 cut(s) 53
LweI GCATC 2 cut(s) 33, 97
MalI GATC 1 cut(s) 180
MboI GATC 1 cut(s) 178
MluCI AATT 2 cut(s) 62, 197
MseI TTAA 3 cut(s) 56, 158, 168
MslI CAYNNNNRTG 2 cut(s) 81, 87
MwoI GCNNNNNNNGC 2 cut(s) 41, 116
NdeII GATC 1 cut(s) 178
NlaIII CATG 2 cut(s) 86, 127
NspI RCATGY 1 cut(s) 86
PaqCI CACCTGC 1 cut(s) 223
PfeI GAWTC 1 cut(s) 238
PkrI GCNGC 1 cut(s) 43
RseI CAYNNNNRTG 2 cut(s) 81, 87
SaqAI TTAA 3 cut(s) 56, 158, 168
SatI GCNGC 1 cut(s) 42
Sau3AI GATC 1 cut(s) 178
SetI ASST 2 cut(s) 218, 237
SfaNI GCATC 2 cut(s) 33, 97
SgeI CNNG 9 cut(s) 85, 95, 107, 123, 136, 143, 160, 194, 245
SmiMI CAYNNNNRTG 2 cut(s) 81, 87
Sse9I AATT 2 cut(s) 62, 197
TasI AATT 2 cut(s) 62, 197
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 3 cut(s) 56, 158, 168
Tru9I TTAA 3 cut(s) 56, 158, 168
TseI GCWGC 1 cut(s) 41
TspDTI ATGAA 1 cut(s) 230
XagI CCTNNNNNAGG 1 cut(s) 99
XapI RAATTY 1 cut(s) 62
XceI RCATGY 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.