Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001478

Physical Location & Seq

Genomic Coordinates Forward (+)

1678070 .. 1679789

Gene Structure 1720 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG024000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGGTTCCACTACCCGAAAAAGAGTATTCCGCAGAGCCGCGGATGATGAAGGAGAAGAGCGCAGGAGAAGAGGCCAGCAGCACCAAAGCGTCGTGGGAGAAGCGCTCCCTCGAATTTATTGACTCCTTGAGGAACTTCCCATGGTTCAAGGAGTATCAGAACCTCATGAAAGACTACAAGAACAAAGAAATCGACTTGGCAATTTTGGTGGAGAAGATGGTGGAATTGTTTAAAGGGAGCCGGGAGTTGATAGCAGGGTTCAATAAATTCTTGCCAGAAACATATCAAATTACCATACCAGCACCAGCGCTACTACCTAGGGTTAGAATAGTTTGTCAAAAGAGGAAGCGCAGCGATGATAGTGCTAGTGATAGTGATGGTGGTATTGATGGTGGAGCTAAGGACTCTAAGATTCGAAAAGTTATCAGGTGTGAGAACAAGACTAAGGGAAGGTTTCGCGACGAAGATAAGGAAAGTGATGAAGGTCACCATGTTTTCTTGGGACACGAATCCCCAACTCTGTCACCAAGTCCTAGGATTACAGTTCTTTCAAACAAGGCGAAGAACGATGATGATAGTACCACTGATTGTGATGACGCTGGATCTATAGATTCTAAACTTCGGAAAGTTATTGCTTTTATGAACAAGGTCGAGGAAAGGTTCCGCAACAACAATGATGATGGTGGTGACGATGATGATACTTGTCAATCCTATATAGAGTTTTTCTTGGATATGGTCTGCAAAAGAAACAAATCATCACCCAATAGGTCTATCGATGCTGATGAAGAAGAGCTTCAGATTTACAAGAAGGTTGCAACACTTTTGGAAGGCCACTCGGACTTAATTGATGAGTTCACCCAGTTTTTAACCGAAGTGCCTAGAGTCGACTCCATCATTGATTTCCGTAAGTGCAAGACTTGCACTCCAAGCTACCGTCTTTTGCCAAAAAATTTCCCCATTCCTGCTGCTACCAAAAGATCGAAGCTAGCTTCTGAAGTATTAAATGATCGTTGGGTATGCATTAACACTAGTCCTAGTACTACTAGTTCTACTTCAAGAGGAGGTGGACGACGCATAGACCGCAAATCGCAGCATGAGCAAGACCTATTAGACTGGGAAGAAGAAAAGTATGAACATGATATGTTGGAAGAGTATGTGAATTCGGCCGCAAATAATATCGCAACGCTAATAAAAGAGATCAAAAACGAGAGTCCGACGGAGATTTATCTTGAAGAACATCTCACGGAGATGAATTTGAGGTGCATTGAGAGATTGTATGGTCTGCGAGGGCGTGATATGGTTGATTTGTTGAAGAACAATATTCAAGCGGTTTTGCCTGTTATATTAAGACGGTTGAAGCAAAAGCAGAAAGAACTGAAACGAAAACGTTCTGATCTAAAACAAGAGTGGGCTCATTTATTTCCTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

476

Amino Acids

54.92

Weight (kDa)

5.95

Isoelectric Point (pI)

59.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAH	PF02671	51 - 91	1.4e-08	Paired amphipathic helix repeat
Sin3_corepress	PF08295	305 - 406	5.1e-20	Sin3 family co-repressor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23810 AT1G24210 AT1G24220 AT1G24220 AT1G24230 AT1G24250 AT1G27240 AT1G27260 AT1G27270 AT1G27280
fragaria_vesca	FvH4_3g01921 FvH4_3g01930 FvH4_5g11770 FvH4_5g22630
malus_domestica	MD08G1247800.v1.1
pyrus_communis	pycom08g21470 pycom15g39040
rosa_chinensis	RchiOBHm_Chr5g0002831 RchiOBHm_Chr5g0002841
rosa_laevigata	RLG00000003026 RLG00000003029 RLG00000031063 RLG00000031064
rosa_multiflora	Rmu_co8115592.1_g000001 Rmu_co8158784.1_g000001 Rmu_sc0012670.1_g000008 Rmu_sc0012670.1_g000009 Rmu_sc0013603.1_g000011 Rmu_sc0013603.1_g000012
rosa_roxburghii	Rroxscaffold_1G00073010 Rroxscaffold_1G00073020 Rroxscaffold_3G00248150
rosa_rugosa	Rorug04G0400000 Rorug04G0400100
rosa_samantha	Rh5AG022900 Rh5BG025500 Rh5BG025600 Rh5CG025400 Rh5CG025500 Rh5DG024000 Rh5DG024100 Rh7AG255700 Rh7AG256500 Rh7BG250100 Rh7CG272100 Rh7CG272900 Rh7CG273000 Rh7DG262900
rosa_wichuraiana	Rw5G002120 Rw5G002140 Rw7G021870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	885
AccII	CGCG	2 cut(s)	40, 459
AciI	CCGC	7 cut(s)	30, 38, 40, 664, 1081, 1167, 1328
AclI	AACGTT	1 cut(s)	1387
AclWI	GGATC	1 cut(s)	610
AcoI	YGGCCR	1 cut(s)	1164
AcsI	RAATTY	5 cut(s)	113, 266, 949, 1159, 1252
AcuI	CTGAAG	2 cut(s)	779, 1014
AfaI	GTAC	2 cut(s)	580, 1039
AfeI	AGCGCT	2 cut(s)	104, 309
AgsI	TTSAA	8 cut(s)	148, 262, 552, 1056, 1232, 1312, 1325, 1357
AhlI	ACTAGT	2 cut(s)	1028, 1043
AluBI	AGCT	5 cut(s)	398, 793, 930, 985, 989
AluI	AGCT	5 cut(s)	398, 793, 930, 985, 989
AlwI	GGATC	1 cut(s)	610
Aor51HI	AGCGCT	2 cut(s)	104, 309
AoxI	GGCC	3 cut(s)	72, 829, 1164
ApeKI	GCWGC	4 cut(s)	78, 351, 965, 1090
ApoI	RAATTY	5 cut(s)	113, 266, 949, 1159, 1252
Asp700I	GAANNNNTTC	2 cut(s)	792, 1387
AspA2I	CCTAGG	2 cut(s)	317, 533
AspLEI	GCGC	4 cut(s)	62, 105, 310, 351
AsuC2I	CCSGG	1 cut(s)	242
AsuHPI	GGTGA	5 cut(s)	479, 516, 698, 750, 847
AsuII	TTCGAA	1 cut(s)	415
AsuNHI	GCTAGC	1 cut(s)	985
AvrII	CCTAGG	2 cut(s)	317, 533
BanII	GRGCYC	1 cut(s)	1414
BbvI	GCAGC	4 cut(s)	90, 363, 952, 1102
BccI	CCATC	5 cut(s)	211, 371, 383, 674, 899
BcgI	CGANNNNNNTGC	2 cut(s)	344, 378
BcnI	CCSGG	1 cut(s)	242
BcuI	ACTAGT	2 cut(s)	1028, 1043
BfaI	CTAG	8 cut(s)	318, 366, 534, 879, 986, 1029, 1035, 1044
BfmI	CTRYAG	1 cut(s)	606
BfoI	RGCGCY	2 cut(s)	106, 311
BisI	GCNGC	6 cut(s)	38, 79, 352, 966, 1091, 1167
BlnI	CCTAGG	2 cut(s)	317, 533
BlsI	GCNGC	6 cut(s)	39, 80, 353, 967, 1092, 1168
BmcAI	AGTACT	1 cut(s)	1039
Bme1390I	CCNGG	1 cut(s)	242
BmiI	GGNNCC	3 cut(s)	6, 239, 662
BmrFI	CCNGG	1 cut(s)	242
BmrI	ACTGGG	2 cut(s)	853, 1123
BmsI	GCATC	1 cut(s)	766
BmtI	GCTAGC	1 cut(s)	989
BmuI	ACTGGG	2 cut(s)	853, 1123
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
Bpu10I	CCTNAGC	1 cut(s)	399
Bpu14I	TTCGAA	1 cut(s)	415
BpuEI	CTTGAG	1 cut(s)	148
BpuMI	CCSGG	1 cut(s)	242
Bsa29I	ATCGAT	1 cut(s)	774
BsaJI	CCNNGG	4 cut(s)	38, 140, 317, 533
BsaXI	ACNNNNNCTCC	2 cut(s)	907, 937
Bse1I	ACTGG	2 cut(s)	859, 1118
BseCI	ATCGAT	1 cut(s)	774
BseDI	CCNNGG	4 cut(s)	38, 140, 317, 533
BseGI	GGATG	1 cut(s)	48
BseMII	CTCAG	1 cut(s)	1416
BseNI	ACTGG	2 cut(s)	859, 1118
BseRI	GAGGAG	1 cut(s)	1074
BseX3I	CGGCCG	1 cut(s)	1164
BseXI	GCAGC	4 cut(s)	90, 363, 952, 1102
Bsh1236I	CGCG	2 cut(s)	40, 459
Bsh1285I	CGRYCG	1 cut(s)	1167
BshFI	GGCC	3 cut(s)	74, 831, 1166
BshVI	ATCGAT	1 cut(s)	774
BsiEI	CGRYCG	1 cut(s)	1167
BsiSI	CCGG	1 cut(s)	241
BslFI	GGGAC	1 cut(s)	516
BsmFI	GGGAC	1 cut(s)	516
BsnI	GGCC	3 cut(s)	74, 831, 1166
Bsp119I	TTCGAA	1 cut(s)	415
Bsp1286I	GDGCHC	1 cut(s)	1414
Bsp143I	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
Bsp19I	CCATGG	1 cut(s)	140
Bsp68I	TCGCGA	1 cut(s)	459
BspACI	CCGC	7 cut(s)	30, 38, 40, 664, 1081, 1167, 1328
BspANI	GGCC	3 cut(s)	74, 831, 1166
BspCNI	CTCAG	1 cut(s)	1417
BspDI	ATCGAT	1 cut(s)	774
BspFNI	CGCG	2 cut(s)	40, 459
BspHI	TCATGA	1 cut(s)	165
BspLI	GGNNCC	3 cut(s)	6, 239, 662
BspOI	GCTAGC	1 cut(s)	989
BspPI	GGATC	1 cut(s)	610
BspQI	GCTCTTC	2 cut(s)	50, 783
BspT104I	TTCGAA	1 cut(s)	415
BsrI	ACTGG	2 cut(s)	859, 1118
BssECI	CCNNGG	4 cut(s)	38, 140, 317, 533
BssMI	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
BssT1I	CCWWGG	3 cut(s)	140, 317, 533
Bst4CI	ACNGT	3 cut(s)	544, 935, 1353
Bst6I	CTCTTC	4 cut(s)	50, 63, 783, 1143
BstAPI	GCANNNNNTGC	1 cut(s)	918
BstBI	TTCGAA	1 cut(s)	415
BstC8I	GCNNGC	2 cut(s)	76, 987
BstDEI	CTNAG	4 cut(s)	399, 408, 444, 1425
BstDSI	CCRYGG	2 cut(s)	38, 140
BstEII	GGTNACC	1 cut(s)	485
BstF5I	GGATG	1 cut(s)	48
BstFNI	CGCG	2 cut(s)	40, 459
BstH2I	RGCGCY	2 cut(s)	106, 311
BstHHI	GCGC	4 cut(s)	62, 105, 310, 351
BstKTI	GATC	5 cut(s)	605, 980, 1009, 1200, 1396
BstMBI	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
BstMCI	CGRYCG	1 cut(s)	1167
BstMWI	GCNNNNNNNGC	4 cut(s)	918, 927, 1080, 1096
BstPI	GGTNACC	1 cut(s)	485
BstSCI	CCNGG	1 cut(s)	240
BstSFI	CTRYAG	1 cut(s)	606
BstUI	CGCG	2 cut(s)	40, 459
BstV1I	GCAGC	4 cut(s)	90, 363, 952, 1102
BstX2I	RGATCY	1 cut(s)	602
BstYI	RGATCY	1 cut(s)	602
BstZI	CGGCCG	1 cut(s)	1164
Bsu15I	ATCGAT	1 cut(s)	774
BsuRI	GGCC	3 cut(s)	74, 831, 1166
BsuTUI	ATCGAT	1 cut(s)	774
BtgI	CCRYGG	2 cut(s)	38, 140
BtgZI	GCGATG	1 cut(s)	369
BtsCI	GGATG	1 cut(s)	48
BtsIMutI	CAGTG	1 cut(s)	582
BtuMI	TCGCGA	1 cut(s)	459
Cac8I	GCNNGC	2 cut(s)	76, 987
CciI	TCATGA	1 cut(s)	165
CfoI	GCGC	4 cut(s)	62, 105, 310, 351
Cfr42I	CCGCGG	1 cut(s)	41
ClaI	ATCGAT	1 cut(s)	774
CseI	GACGC	3 cut(s)	78, 605, 1080
Csp6I	GTAC	2 cut(s)	579, 1038
CspCI	CAANNNNNGTGG	2 cut(s)	189, 224
CviAII	CATG	5 cut(s)	141, 166, 491, 1094, 1136
CviQI	GTAC	2 cut(s)	579, 1038
DdeI	CTNAG	4 cut(s)	399, 408, 444, 1425
DpnI	GATC	5 cut(s)	604, 979, 1008, 1199, 1395
DpnII	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
DraI	TTTAAA	1 cut(s)	232
EaeI	YGGCCR	1 cut(s)	1164
EagI	CGGCCG	1 cut(s)	1164
Eam1104I	CTCTTC	4 cut(s)	50, 63, 783, 1143
EarI	CTCTTC	4 cut(s)	50, 63, 783, 1143
EclXI	CGGCCG	1 cut(s)	1164
Eco130I	CCWWGG	3 cut(s)	140, 317, 533
Eco24I	GRGCYC	1 cut(s)	1414
Eco47III	AGCGCT	2 cut(s)	104, 309
Eco52I	CGGCCG	1 cut(s)	1164
Eco57I	CTGAAG	2 cut(s)	779, 1014
Eco91I	GGTNACC	1 cut(s)	485
EcoO65I	GGTNACC	1 cut(s)	485
EcoRI	GAATTC	1 cut(s)	1159
EcoT14I	CCWWGG	3 cut(s)	140, 317, 533
EcoT22I	ATGCAT	1 cut(s)	1022
EcoT38I	GRGCYC	1 cut(s)	1414
ErhI	CCWWGG	3 cut(s)	140, 317, 533
FaeI	CATG	5 cut(s)	144, 169, 494, 1097, 1139
FalI	AAGNNNNNCTT	2 cut(s)	777, 809
FaqI	GGGAC	1 cut(s)	516
FatI	CATG	5 cut(s)	140, 165, 490, 1093, 1135
FblI	GTMKAC	1 cut(s)	885
Fnu4HI	GCNGC	6 cut(s)	38, 79, 352, 966, 1091, 1167
FokI	GGATG	1 cut(s)	55
FriOI	GRGCYC	1 cut(s)	1414
Fsp4HI	GCNGC	6 cut(s)	38, 79, 352, 966, 1091, 1167
FspBI	CTAG	8 cut(s)	318, 366, 534, 879, 986, 1029, 1035, 1044
GlaI	GCGC	4 cut(s)	61, 104, 309, 350
GluI	GCNGC	6 cut(s)	38, 79, 352, 966, 1091, 1167
HaeII	RGCGCY	2 cut(s)	106, 311
HaeIII	GGCC	3 cut(s)	74, 831, 1166
HapII	CCGG	1 cut(s)	241
HgaI	GACGC	3 cut(s)	78, 605, 1080
HhaI	GCGC	4 cut(s)	62, 105, 310, 351
Hin1II	CATG	5 cut(s)	144, 169, 494, 1097, 1139
Hin6I	GCGC	4 cut(s)	60, 103, 308, 349
HinP1I	GCGC	4 cut(s)	60, 103, 308, 349
HincII	GTYRAC	1 cut(s)	886
HindII	GTYRAC	1 cut(s)	886
HinfI	GANTC	8 cut(s)	122, 404, 412, 509, 611, 882, 887, 1210
HpaII	CCGG	1 cut(s)	241
HphI	GGTGA	5 cut(s)	479, 516, 698, 750, 847
Hpy166II	GTNNAC	3 cut(s)	855, 886, 1067
Hpy188I	TCNGA	7 cut(s)	159, 624, 798, 838, 994, 1215, 1393
Hpy188III	TCNNGA	5 cut(s)	166, 458, 1056, 1229, 1424
Hpy8I	GTNNAC	3 cut(s)	855, 886, 1067
Hpy99I	CGWCG	4 cut(s)	94, 464, 1074, 1219
HpyAV	CCTTC	5 cut(s)	43, 444, 476, 802, 821
HpyCH4III	ACNGT	3 cut(s)	544, 935, 1353
HpyCH4IV	ACGT	1 cut(s)	1387
HpyCH4V	TGCA	6 cut(s)	741, 815, 912, 921, 1020, 1263
HpyF10VI	GCNNNNNNNGC	4 cut(s)	918, 927, 1080, 1096
HpyF3I	CTNAG	4 cut(s)	399, 408, 444, 1425
HpySE526I	ACGT	1 cut(s)	1387
Hsp92II	CATG	5 cut(s)	144, 169, 494, 1097, 1139
HspAI	GCGC	4 cut(s)	60, 103, 308, 349
KspI	CCGCGG	1 cut(s)	41
Kzo9I	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
LguI	GCTCTTC	2 cut(s)	50, 783
LmnI	GCTCC	3 cut(s)	110, 237, 395
Lsp1109I	GCAGC	4 cut(s)	90, 363, 952, 1102
LweI	GCATC	1 cut(s)	766
MaeI	CTAG	8 cut(s)	318, 366, 534, 879, 986, 1029, 1035, 1044
MaeII	ACGT	1 cut(s)	1387
MaeIII	GTNAC	3 cut(s)	485, 522, 686
MalI	GATC	5 cut(s)	604, 979, 1008, 1199, 1395
MboI	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
MflI	RGATCY	1 cut(s)	602
MhlI	GDGCHC	1 cut(s)	1414
MluCI	AATT	9 cut(s)	113, 201, 224, 266, 288, 843, 949, 1159, 1252
MlyI	GAGTC	5 cut(s)	116, 398, 881, 891, 1219
MmeI	TCCRAC	2 cut(s)	1125, 1238
Mph1103I	ATGCAT	1 cut(s)	1022
MroXI	GAANNNNTTC	2 cut(s)	792, 1387
MseI	TTAA	6 cut(s)	231, 842, 866, 1001, 1023, 1346
MslI	CAYNNNNRTG	1 cut(s)	1247
MspA1I	CMGCKG	1 cut(s)	40
MspI	CCGG	1 cut(s)	241
MspR9I	CCNGG	1 cut(s)	242
MvnI	CGCG	2 cut(s)	40, 459
MwoI	GCNNNNNNNGC	4 cut(s)	918, 927, 1080, 1096
NciI	CCSGG	1 cut(s)	242
NcoI	CCATGG	1 cut(s)	140
NdeII	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
NheI	GCTAGC	1 cut(s)	985
NlaIII	CATG	5 cut(s)	144, 169, 494, 1097, 1139
NlaIV	GGNNCC	3 cut(s)	6, 239, 662
NmuCI	GTSAC	3 cut(s)	485, 522, 686
NruI	TCGCGA	1 cut(s)	459
NsiI	ATGCAT	1 cut(s)	1022
NspV	TTCGAA	1 cut(s)	415
PagI	TCATGA	1 cut(s)	165
PciSI	GCTCTTC	2 cut(s)	50, 783
PdmI	GAANNNNTTC	2 cut(s)	792, 1387
PfeI	GAWTC	3 cut(s)	412, 509, 611
PkrI	GCNGC	6 cut(s)	39, 80, 353, 967, 1092, 1168
PleI	GAGTC	5 cut(s)	116, 398, 881, 890, 1218
PpsI	GAGTC	5 cut(s)	116, 398, 881, 890, 1218
Psp1406I	AACGTT	1 cut(s)	1387
PspEI	GGTNACC	1 cut(s)	485
PspN4I	GGNNCC	3 cut(s)	6, 239, 662
PsrI	GAACNNNNNNTAC	2 cut(s)	1030, 1062
PsuI	RGATCY	1 cut(s)	602
RruI	TCGCGA	1 cut(s)	459
RsaI	GTAC	2 cut(s)	580, 1039
RsaNI	GTAC	2 cut(s)	579, 1038
RseI	CAYNNNNRTG	1 cut(s)	1247
SacII	CCGCGG	1 cut(s)	41
SalI	GTCGAC	1 cut(s)	884
SapI	GCTCTTC	2 cut(s)	50, 783
SaqAI	TTAA	6 cut(s)	231, 842, 866, 1001, 1023, 1346
SatI	GCNGC	6 cut(s)	38, 79, 352, 966, 1091, 1167
Sau3AI	GATC	5 cut(s)	602, 977, 1006, 1197, 1393
ScaI	AGTACT	1 cut(s)	1039
SchI	GAGTC	5 cut(s)	116, 398, 881, 891, 1219
ScrFI	CCNGG	1 cut(s)	242
SduI	GDGCHC	1 cut(s)	1414
SfaNI	GCATC	1 cut(s)	766
SfcI	CTRYAG	1 cut(s)	606
Sfr303I	CCGCGG	1 cut(s)	41
SfuI	TTCGAA	1 cut(s)	415
SgrBI	CCGCGG	1 cut(s)	41
SmiMI	CAYNNNNRTG	1 cut(s)	1247
SmlI	CTYRAG	1 cut(s)	127
SmoI	CTYRAG	1 cut(s)	127
SpeI	ACTAGT	2 cut(s)	1028, 1043
Sse9I	AATT	9 cut(s)	113, 201, 224, 266, 288, 843, 949, 1159, 1252
SsiI	CCGC	7 cut(s)	30, 38, 40, 664, 1081, 1167, 1328
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	8 cut(s)	318, 366, 534, 879, 986, 1029, 1035, 1044
StyD4I	CCNGG	1 cut(s)	240
StyI	CCWWGG	3 cut(s)	140, 317, 533
TaaI	ACNGT	3 cut(s)	544, 935, 1353
TaiI	ACGT	1 cut(s)	1390
TaqI	TCGA	7 cut(s)	111, 192, 415, 651, 774, 885, 980
TasI	AATT	9 cut(s)	113, 201, 224, 266, 288, 843, 949, 1159, 1252
TatI	WGTACW	1 cut(s)	1037
TauI	GCSGC	2 cut(s)	40, 1169
TfiI	GAWTC	3 cut(s)	412, 509, 611
Tru1I	TTAA	6 cut(s)	231, 842, 866, 1001, 1023, 1346
Tru9I	TTAA	6 cut(s)	231, 842, 866, 1001, 1023, 1346
TscAI	CASTG	1 cut(s)	589
TseFI	GTSAC	3 cut(s)	485, 522, 686
TseI	GCWGC	4 cut(s)	78, 351, 965, 1090
Tsp45I	GTSAC	3 cut(s)	485, 522, 686
TspDTI	ATGAA	7 cut(s)	62, 182, 495, 656, 798, 1146, 1265
TspGWI	ACGGA	3 cut(s)	893, 1232, 1259
TspRI	CASTG	1 cut(s)	589
XapI	RAATTY	5 cut(s)	113, 266, 949, 1159, 1252
XmaJI	CCTAGG	2 cut(s)	317, 533
XmiI	GTMKAC	1 cut(s)	885
XmnI	GAANNNNTTC	2 cut(s)	792, 1387
XspI	CTAG	8 cut(s)	318, 366, 534, 879, 986, 1029, 1035, 1044
ZrmI	AGTACT	1 cut(s)	1039
Zsp2I	ATGCAT	1 cut(s)	1022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.