Rh5DG307300

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
38893968 .. 38898971
5004 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG307300.1

Sequence Viewer

Length: 1191 bp
ATGGAATCGACTGTGAAGTACACCCTGGTGGTGAAGGTGATGTGTCGGACCGGATCTAGAGGTATTCCAATTCAGGGTGATTCAATATCTGTACCTGAGGGTGTGCGGTTAGACAAAACTTATTATGCATCTTTACTGTCATCTACACTAGGAGTTACTATAGATGAGGCAAAGAATGAAATGAGTCGATATGGTGGAAATGGGGTAACACTAGAGTGGTTGAGATTAAGATTTCAGAGTGTTTCAGATGATAGTTCTCTTGAATTTATAGAGTTTGCAGCAAGAGGATTCTTGCTATATATATTAGGTTGCACACTTTTTGTGGACAAGACTGGGAATAGGATAAATGTGATTTACCTACATTTTTTACGGGATCTTAATAGGGTTGGTCAGTATGCCTGGGGAGCTGCGGGGTTAGCATTTTTATATCGACAGTTAGGACTTGCATCCAGACTTGGTTGTAGGCAAATTGGGGGTTATTTGACATTGCTTGAGGCTTGGATATATGAGCACTTCCGGAATGTAGTTTCCCCTCATCTTCGTGTTGAATATTCAAAGAATGAGCCACGAGTGAATCGTTGGGAACCTCGAAAAGATGCAGGTTTGTCACTAGTGTACGTGCAAGCTCTTCGCCAACAGCTTGATCATATGCAGGCGCACAAGGATCCATATCGTGGTCATAGGGAGGCTCATCCATTATTGGAAATCACATTTTACACAGGAATGCTTAAGTGTTTAGATATTGTGGAACCATATTATCCTGATAGAGTTCTAAGACAATTTGGTCGAGTTCAAACAATTCCTCGCAACCCTTACACCCCTTCTCGTGTTCGACGAGTTTCTGATTCCAAATCATACAAGGTTGTGTATGAGTACTTTGATGGATTGTGGCAAAGATGGCGAGATCACGTGTTAGCAGATGCGAACCGAAGCACTCCAGTTAAGTTTTCATATGACTGCACTCCAGAATACTTATCGTGGTACCAAAAGATCACACATCCCTATGTTCAACACCCTGATCGGGTGTCTGCTGCAGTTGATTCAAACGAGGAAAATCATCCTTTACAGTGTATATCACGGGTATTGTGTATCAGTCAATCTATTGTTGATGTTGGCCGAGATAATGCTATAAGACAACCAATGACGCTATATGAGGCAATTGAAAGCATTCTTACATATACTATTAGGTGA

Protein Analysis

396

Amino Acids

45.8

Weight (kDa)

8.9

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 21 - 329 2.7e-45 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 783
Acc36I ACCTGC 1 cut(s) 590
Acc65I GGTACC 1 cut(s) 981
AccB1I GGYRCC 1 cut(s) 981
AccB7I CCANNNNNTGG 1 cut(s) 674
AccIII TCCGGA 1 cut(s) 516
AciI CCGC 2 cut(s) 106, 410
AclWI GGATC 4 cut(s) 61, 381, 659, 672
AcoI YGGCCR 1 cut(s) 1114
AcsI RAATTY 1 cut(s) 263
AcvI CACGTG 1 cut(s) 910
AfaI GTAC 5 cut(s) 20, 93, 617, 875, 983
AfiI CCNNNNNNNGG 3 cut(s) 74, 674, 1021
AflII CTTAAG 1 cut(s) 728
AflIII ACRYGT 1 cut(s) 909
AgsI TTSAA 8 cut(s) 84, 263, 548, 555, 794, 1010, 1044, 1163
AhlI ACTAGT 1 cut(s) 610
AjnI CCWGG 2 cut(s) 24, 398
AleI CACNNNNGTG 2 cut(s) 26, 214
AluBI AGCT 3 cut(s) 407, 626, 640
AluI AGCT 3 cut(s) 407, 626, 640
Alw21I GWGCWC 1 cut(s) 513
AlwI GGATC 4 cut(s) 61, 381, 659, 672
Aor13HI TCCGGA 1 cut(s) 516
AoxI GGCC 1 cut(s) 1114
ApeKI GCWGC 3 cut(s) 278, 407, 1031
ApoI RAATTY 1 cut(s) 263
Asp700I GAANNNNTTC 1 cut(s) 1167
Asp718I GGTACC 1 cut(s) 981
AspLEI GCGC 1 cut(s) 658
AspS9I GGNCC 1 cut(s) 48
AsuHPI GGTGA 3 cut(s) 43, 49, 89
AvaII GGWCC 1 cut(s) 48
AxyI CCTNAGG 1 cut(s) 96
BamHI GGATCC 1 cut(s) 664
BanI GGYRCC 1 cut(s) 981
BauI CACGAG 2 cut(s) 567, 825
BbrPI CACGTG 1 cut(s) 910
Bbv12I GWGCWC 1 cut(s) 513
BbvI GCAGC 3 cut(s) 290, 394, 1018
BccI CCATC 2 cut(s) 875, 891
BcgI CGANNNNNNTGC 2 cut(s) 611, 645
BciT130I CCWGG 2 cut(s) 26, 400
BclI TGATCA 1 cut(s) 643
BcuI ACTAGT 1 cut(s) 610
BfaI CTAG 4 cut(s) 57, 149, 212, 611
BfmI CTRYAG 2 cut(s) 159, 1032
BfrI CTTAAG 1 cut(s) 728
BfuAI ACCTGC 1 cut(s) 590
BisI GCNGC 3 cut(s) 279, 408, 1032
BlsI GCNGC 3 cut(s) 280, 409, 1033
BmcAI AGTACT 1 cut(s) 875
Bme1390I CCNGG 2 cut(s) 26, 400
Bme18I GGWCC 1 cut(s) 48
BmgT120I GGNCC 1 cut(s) 48
BmiI GGNNCC 4 cut(s) 585, 666, 750, 983
BmrFI CCNGG 2 cut(s) 26, 400
BmrI ACTGGG 1 cut(s) 342
BmsI GCATC 4 cut(s) 137, 455, 586, 910
BmuI ACTGGG 1 cut(s) 342
BpmI CTGGAG 2 cut(s) 921, 948
BpuEI CTTGAG 1 cut(s) 512
BsaAI YACGTR 2 cut(s) 619, 910
BsaBI GATNNNNATC 1 cut(s) 669
BsaJI CCNNGG 2 cut(s) 24, 399
BsaWI WCCGGW 2 cut(s) 50, 516
Bsc4I CCNNNNNNNGG 3 cut(s) 74, 674, 1021
Bse1I ACTGG 2 cut(s) 337, 938
Bse21I CCTNAGG 1 cut(s) 96
Bse3DI GCAATG 1 cut(s) 485
Bse8I GATNNNNATC 1 cut(s) 669
BseAI TCCGGA 1 cut(s) 516
BseBI CCWGG 2 cut(s) 26, 400
BseDI CCNNGG 2 cut(s) 24, 399
BseGI GGATG 4 cut(s) 446, 691, 997, 1057
BseJI GATNNNNATC 1 cut(s) 669
BseLI CCNNNNNNNGG 3 cut(s) 74, 674, 1021
BseMI GCAATG 1 cut(s) 485
BseMII CTCAG 1 cut(s) 87
BseNI ACTGG 2 cut(s) 337, 938
BseXI GCAGC 3 cut(s) 290, 394, 1018
BsgI GTGCAG 1 cut(s) 943
BshFI GGCC 1 cut(s) 1116
BshNI GGYRCC 1 cut(s) 981
BsiHKAI GWGCWC 1 cut(s) 513
BsiSI CCGG 2 cut(s) 51, 517
BslI CCNNNNNNNGG 3 cut(s) 74, 674, 1021
BsmI GAATGC 2 cut(s) 729, 1167
BsnI GGCC 1 cut(s) 1116
Bsp1286I GDGCHC 1 cut(s) 513
Bsp13I TCCGGA 1 cut(s) 516
Bsp143I GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
BspACI CCGC 2 cut(s) 106, 410
BspANI GGCC 1 cut(s) 1116
BspCNI CTCAG 1 cut(s) 88
BspEI TCCGGA 1 cut(s) 516
BspLI GGNNCC 4 cut(s) 585, 666, 750, 983
BspMAI CTGCAG 1 cut(s) 1036
BspMI ACCTGC 1 cut(s) 590
BspPI GGATC 4 cut(s) 61, 381, 659, 672
BspQI GCTCTTC 1 cut(s) 633
BspT107I GGYRCC 1 cut(s) 981
BspTI CTTAAG 1 cut(s) 728
BsrDI GCAATG 1 cut(s) 485
BsrI ACTGG 2 cut(s) 337, 938
BssECI CCNNGG 2 cut(s) 24, 399
BssMI GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
BssSI CACGAG 2 cut(s) 567, 825
Bst2BI CACGAG 2 cut(s) 567, 825
Bst2UI CCWGG 2 cut(s) 26, 400
Bst4CI ACNGT 4 cut(s) 13, 138, 435, 1068
Bst6I CTCTTC 1 cut(s) 633
BstAFI CTTAAG 1 cut(s) 728
BstBAI YACGTR 2 cut(s) 619, 910
BstC8I GCNNGC 2 cut(s) 624, 654
BstDEI CTNAG 2 cut(s) 96, 773
BstF5I GGATG 4 cut(s) 446, 691, 997, 1057
BstHHI GCGC 1 cut(s) 658
BstKTI GATC 7 cut(s) 56, 376, 646, 667, 907, 993, 1021
BstMBI GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
BstMWI GCNNNNNNNGC 3 cut(s) 404, 416, 898
BstNI CCWGG 2 cut(s) 26, 400
BstSCI CCNGG 2 cut(s) 24, 398
BstSFI CTRYAG 2 cut(s) 159, 1032
BstV1I GCAGC 3 cut(s) 290, 394, 1018
BstX2I RGATCY 3 cut(s) 53, 373, 664
BstYI RGATCY 3 cut(s) 53, 373, 664
Bsu36I CCTNAGG 1 cut(s) 96
BsuRI GGCC 1 cut(s) 1116
BtsCI GGATG 4 cut(s) 446, 691, 997, 1057
BtsIMutI CAGTG 1 cut(s) 1073
BveI ACCTGC 1 cut(s) 590
Cac8I GCNNGC 2 cut(s) 624, 654
CfoI GCGC 1 cut(s) 658
Cfr13I GGNCC 1 cut(s) 48
CpoI CGGWCCG 1 cut(s) 48
CseI GACGC 1 cut(s) 1153
Csp6I GTAC 5 cut(s) 19, 92, 616, 874, 982
CspI CGGWCCG 1 cut(s) 48
CviJI RGCY 7 cut(s) 407, 497, 565, 626, 640, 689, 1116
CviKI_1 RGCY 7 cut(s) 407, 497, 565, 626, 640, 689, 1116
CviQI GTAC 5 cut(s) 19, 92, 616, 874, 982
DdeI CTNAG 2 cut(s) 96, 773
DpnI GATC 7 cut(s) 55, 375, 645, 666, 906, 992, 1020
DpnII GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
DrdI GACNNNNNNGTC 1 cut(s) 783
DseDI GACNNNNNNGTC 1 cut(s) 783
EaeI YGGCCR 1 cut(s) 1114
Eam1104I CTCTTC 1 cut(s) 633
EarI CTCTTC 1 cut(s) 633
Eco47I GGWCC 1 cut(s) 48
Eco72I CACGTG 1 cut(s) 910
Eco81I CCTNAGG 1 cut(s) 96
EcoRII CCWGG 2 cut(s) 24, 398
EcoT22I ATGCAT 1 cut(s) 130
FauI CCCGC 1 cut(s) 403
FauNDI CATATG 2 cut(s) 648, 952
FbaI TGATCA 1 cut(s) 643
Fnu4HI GCNGC 3 cut(s) 279, 408, 1032
FokI GGATG 4 cut(s) 433, 678, 984, 1044
Fsp4HI GCNGC 3 cut(s) 279, 408, 1032
FspBI CTAG 4 cut(s) 57, 149, 212, 611
GlaI GCGC 1 cut(s) 657
GluI GCNGC 3 cut(s) 279, 408, 1032
GsuI CTGGAG 2 cut(s) 921, 948
HaeIII GGCC 1 cut(s) 1116
HapII CCGG 2 cut(s) 51, 517
HgaI GACGC 1 cut(s) 1153
HhaI GCGC 1 cut(s) 658
Hin6I GCGC 1 cut(s) 656
HinP1I GCGC 1 cut(s) 656
HinfI GANTC 7 cut(s) 5, 80, 184, 288, 574, 845, 1040
HpaII CCGG 2 cut(s) 51, 517
HphI GGTGA 3 cut(s) 43, 49, 89
Hpy166II GTNNAC 3 cut(s) 21, 325, 616
Hpy188I TCNGA 4 cut(s) 48, 237, 247, 844
Hpy188III TCNNGA 6 cut(s) 57, 260, 450, 517, 761, 965
Hpy8I GTNNAC 3 cut(s) 21, 325, 616
Hpy99I CGWCG 1 cut(s) 837
HpyAV CCTTC 2 cut(s) 28, 831
HpyCH4III ACNGT 4 cut(s) 13, 138, 435, 1068
HpyCH4IV ACGT 2 cut(s) 618, 909
HpyCH4V TGCA 9 cut(s) 128, 278, 312, 446, 599, 622, 652, 960, 1034
HpyF10VI GCNNNNNNNGC 3 cut(s) 404, 416, 898
HpyF3I CTNAG 2 cut(s) 96, 773
HpySE526I ACGT 2 cut(s) 618, 909
HspAI GCGC 1 cut(s) 656
Kpn2I TCCGGA 1 cut(s) 516
KpnI GGTACC 1 cut(s) 985
Ksp22I TGATCA 1 cut(s) 643
Kzo9I GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
LguI GCTCTTC 1 cut(s) 633
LmnI GCTCC 1 cut(s) 404
Lsp1109I GCAGC 3 cut(s) 290, 394, 1018
LweI GCATC 4 cut(s) 137, 455, 586, 910
MaeI CTAG 4 cut(s) 57, 149, 212, 611
MaeII ACGT 2 cut(s) 618, 909
MaeIII GTNAC 3 cut(s) 154, 205, 606
MalI GATC 7 cut(s) 55, 375, 645, 666, 906, 992, 1020
MboI GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
MboII GAAGA 2 cut(s) 530, 620
MfeI CAATTG 1 cut(s) 1158
MflI RGATCY 3 cut(s) 53, 373, 664
MhlI GDGCHC 1 cut(s) 513
MluCI AATT 6 cut(s) 69, 263, 468, 779, 798, 1158
MlyI GAGTC 1 cut(s) 193
MmeI TCCRAC 1 cut(s) 26
Mph1103I ATGCAT 1 cut(s) 130
MroI TCCGGA 1 cut(s) 516
MroXI GAANNNNTTC 1 cut(s) 1167
MseI TTAA 4 cut(s) 227, 378, 729, 942
MslI CAYNNNNRTG 5 cut(s) 26, 214, 540, 722, 1002
MspCI CTTAAG 1 cut(s) 728
MspI CCGG 2 cut(s) 51, 517
MspR9I CCNGG 2 cut(s) 26, 400
MunI CAATTG 1 cut(s) 1158
Mva1269I GAATGC 2 cut(s) 729, 1167
MvaI CCWGG 2 cut(s) 26, 400
MwoI GCNNNNNNNGC 3 cut(s) 404, 416, 898
NdeI CATATG 2 cut(s) 648, 952
NdeII GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
NlaIV GGNNCC 4 cut(s) 585, 666, 750, 983
NmeAIII GCCGAG 1 cut(s) 1142
NmuCI GTSAC 1 cut(s) 606
NsiI ATGCAT 1 cut(s) 130
OliI CACNNNNGTG 2 cut(s) 26, 214
PciSI GCTCTTC 1 cut(s) 633
PcsI WCGNNNNNNNCGW 2 cut(s) 574, 832
PctI GAATGC 2 cut(s) 729, 1167
PdmI GAANNNNTTC 1 cut(s) 1167
PfeI GAWTC 6 cut(s) 5, 80, 288, 574, 845, 1040
PflMI CCANNNNNTGG 1 cut(s) 674
PkrI GCNGC 3 cut(s) 280, 409, 1033
PleI GAGTC 1 cut(s) 192
PmaCI CACGTG 1 cut(s) 910
PmlI CACGTG 1 cut(s) 910
PpsI GAGTC 1 cut(s) 192
Ppu21I YACGTR 2 cut(s) 619, 910
Psp6I CCWGG 2 cut(s) 24, 398
PspCI CACGTG 1 cut(s) 910
PspGI CCWGG 2 cut(s) 24, 398
PspN4I GGNNCC 4 cut(s) 585, 666, 750, 983
PspPI GGNCC 1 cut(s) 48
PstI CTGCAG 1 cut(s) 1036
PsuI RGATCY 3 cut(s) 53, 373, 664
RsaI GTAC 5 cut(s) 20, 93, 617, 875, 983
RsaNI GTAC 5 cut(s) 19, 92, 616, 874, 982
RseI CAYNNNNRTG 5 cut(s) 26, 214, 540, 722, 1002
Rsr2I CGGWCCG 1 cut(s) 48
RsrII CGGWCCG 1 cut(s) 48
SapI GCTCTTC 1 cut(s) 633
SaqAI TTAA 4 cut(s) 227, 378, 729, 942
SatI GCNGC 3 cut(s) 279, 408, 1032
Sau3AI GATC 7 cut(s) 53, 373, 643, 664, 904, 990, 1018
Sau96I GGNCC 1 cut(s) 48
ScaI AGTACT 1 cut(s) 875
SchI GAGTC 1 cut(s) 193
ScrFI CCNGG 2 cut(s) 26, 400
SduI GDGCHC 1 cut(s) 513
SfaNI GCATC 4 cut(s) 137, 455, 586, 910
SfcI CTRYAG 2 cut(s) 159, 1032
SinI GGWCC 1 cut(s) 48
SmiMI CAYNNNNRTG 5 cut(s) 26, 214, 540, 722, 1002
SmlI CTYRAG 2 cut(s) 491, 728
SmoI CTYRAG 2 cut(s) 491, 728
SpeI ACTAGT 1 cut(s) 610
Sse9I AATT 6 cut(s) 69, 263, 468, 779, 798, 1158
SsiI CCGC 2 cut(s) 106, 410
SspI AATATT 1 cut(s) 551
SspMI CTAG 4 cut(s) 57, 149, 212, 611
StyD4I CCNGG 2 cut(s) 24, 398
TaaI ACNGT 4 cut(s) 13, 138, 435, 1068
TaiI ACGT 2 cut(s) 621, 912
TaqI TCGA 6 cut(s) 8, 187, 430, 589, 787, 832
TasI AATT 6 cut(s) 69, 263, 468, 779, 798, 1158
TatI WGTACW 2 cut(s) 18, 873
TfiI GAWTC 6 cut(s) 5, 80, 288, 574, 845, 1040
Tru1I TTAA 4 cut(s) 227, 378, 729, 942
Tru9I TTAA 4 cut(s) 227, 378, 729, 942
TscAI CASTG 1 cut(s) 1073
TseFI GTSAC 1 cut(s) 606
TseI GCWGC 3 cut(s) 278, 407, 1031
Tsp45I GTSAC 1 cut(s) 606
TspDTI ATGAA 2 cut(s) 192, 939
TspRI CASTG 1 cut(s) 1073
Van91I CCANNNNNTGG 1 cut(s) 674
Vha464I CTTAAG 1 cut(s) 728
VpaK11BI GGWCC 1 cut(s) 48
XapI RAATTY 1 cut(s) 263
XbaI TCTAGA 1 cut(s) 56
XmnI GAANNNNTTC 1 cut(s) 1167
XspI CTAG 4 cut(s) 57, 149, 212, 611
ZrmI AGTACT 1 cut(s) 875
Zsp2I ATGCAT 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.