AT1G61560

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
22708468 .. 22712289
3822 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61560.10

Sequence Viewer

Length: 1752 bp
ATGGCGGATCAAGTTAAAGAAAAGACATTGGAGGAAACTTCTACATGGGCCGTCGCGGTGGTTTGCTTCGTCTTGCTTCTGATTTCGATCGTTATTGAAAAACTTATTCATAAAATTGGATCCTGGTTTAAAAAGAAGAACAAAAAAGCTCTATATGAAGCACTTGAAAAAGTGAAAGCAGAGCTTATGCTGATGGGATTCATATCACTACTTCTAACAATTGGACAAGGATATATCTCAAATATTTGCATCCCTAAGAACATCGCAGCATCGATGCACCCTTGTAGTGCATCCGAAGAAGCAAGAAAGTATGGTAAGAAAGATGTCCCAAAGGAAGATGAAGAAGAAAACTTGCGTCGAAAGCTTCTACAGTTAGTTGATTCTCTTATTCCTCGAAGGAGTTTGGCTACTAAAGGTTATGATAAGTGTGCAGAGAAGGGAAAAGTCGCTTTTGTATCGGCTTATGGCATGCATCAGCTGCATATATTCATCTTTGTTCTTGCGGTTTGTCATGTGATCTACTGCATTGTTACTTATGCTTTGGGAAAGACCAAAATGAGAAGGTGGAAGAAGTGGGAAGAGGAGACTAAGACTATCGAATATCAGTATTCACACGATCCCGAGAGGTTTAGGTTTGCGCGGGATACATCTTTCGGGCGTAGACATCTGAGTTTCTGGAGCAAATCAACTATTACGCTGTGGATTGTATGTTTCTTCAGGCAGTTCTTTAGATCTGTAACCAAAGTTGATTACTTAACACTGAGACATGGTTTCATCATGGCCCATTTGGCTCCTGGGAGCGACGCAAGGTTCGATTTCCGAAAGTATATTCAGAGATCACTAGAGGAAGACTTCAAAACCATTGTCGAGATCAACCCTGTGATCTGGTTCATAGCTGTGCTATTCCTCCTGACAAACACAAACGGATTGAATTCTTACCTCTGGCTACCGTTCATTCCCTTCATCGTGATTCTTATTGTTGGAACAAAACTTCAAGTGATAATAACAAAACTAGGACTTAGAATCCAAGAGAAAGGCGACGTAGTGAAAGGCACACCGCTAGTTCAACCCGGTGATCATTTCTTCTGGTTCGGTCGTCCACGTTTCATTCTCTTCCTCATTCACTTAGTCCTCTTCACGAACGCGTTTCAACTAGCTTTCTTTGTCTGGAGTACGTATGAATTCGGTCTAAAGAACTGTTTCCATGAAAGCAGAGTTGACGTGATCATCAGAATCTCAATCGGACTTTTAGTTCAGATTCTTTGCAGCTACGTTACTCTTCCTCTATATGCTCTTGTTACTCAAATGGGTTCAAAGATGAAACCAACAGTGTTCAACGAGAGAGTAGCAACAGCGTTAAAGAGTTGGCATCACACAGCTAAGAAAAATATCAAACATGGAAGAACTTCAGAATCAACAACACCTTTCTCTAGTAGACCAACAACACCAACTCATGGTTCTTCTCCGATTCATCTCCTTCGTAATGCTCCTCACAAACGAAGCAGAAGCGTTGACGAAAGCTTTGCGAATTCGTTTTCTCCGAGAAACTCTGATTTCGATTCGTGGGATCCTGAGTCTCAACATGAAACTGCTGAGACTTCGAATTCGAATCATCGTTCTAGGTTTGGAGAAGAAGAATCGGAGAAAAAGTTTGTTTCTTCATCAGTGGAACTTCCTCCTGGACCTGGACAAATACGAACACAGCATGAGATTAGTACTATAAGCTTAAGGGATTTTTCGTTTAAGCGATGA

Protein Analysis

583

Amino Acids

67.23

Weight (kDa)

9.55

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 7 - 442 2e-219 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1454
AccI GTMKAC 2 cut(s) 661, 1435
AccII CGCG 3 cut(s) 56, 640, 1145
AciI CCGC 5 cut(s) 5, 56, 503, 640, 1058
AclWI GGATC 6 cut(s) 15, 114, 127, 611, 1562, 1575
AcsI RAATTY 4 cut(s) 931, 1181, 1528, 1603
AcuI CTGAAG 2 cut(s) 700, 1392
AfaI GTAC 2 cut(s) 1174, 1717
AfiI CCNNNNNNNGG 2 cut(s) 1454, 1685
AflII CTTAAG 1 cut(s) 1726
AflIII ACRYGT 1 cut(s) 1143
AgsI TTSAA 9 cut(s) 98, 167, 856, 931, 995, 1067, 1151, 1314, 1336
AjiI CACGTC 1 cut(s) 1222
AjnI CCWGG 4 cut(s) 122, 793, 1678, 1684
AjuI GAANNNNNNNTTGG 2 cut(s) 1441, 1473
AloI GAACNNNNNNTCC 2 cut(s) 1236, 1268
Alw26I GTCTC 4 cut(s) 578, 757, 1581, 1589
AlwI GGATC 6 cut(s) 15, 114, 127, 611, 1562, 1575
Ama87I CYCGRG 1 cut(s) 620
AoxI GGCC 2 cut(s) 48, 780
ApeKI GCWGC 3 cut(s) 266, 478, 1266
ApoI RAATTY 4 cut(s) 931, 1181, 1528, 1603
ArsI GACNNNNNNTTYG 8 cut(s) 794, 826, 849, 881, 1505, 1537, 1588, 1620
Asp700I GAANNNNTTC 2 cut(s) 1199, 1405
AspLEI GCGC 1 cut(s) 640
AspS9I GGNCC 3 cut(s) 48, 781, 1682
AsuC2I CCSGG 1 cut(s) 1071
AsuHPI GGTGA 1 cut(s) 1085
AsuII TTCGAA 2 cut(s) 1601, 1607
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 1 cut(s) 1682
BamHI GGATCC 2 cut(s) 119, 1567
BbsI GAAGAC 1 cut(s) 855
BbvI GCAGC 3 cut(s) 278, 465, 1278
BccI CCATC 1 cut(s) 187
BceAI ACGGC 1 cut(s) 35
BcgI CGANNNNNNTGC 2 cut(s) 1505, 1539
BciT130I CCWGG 4 cut(s) 124, 795, 1680, 1686
BciVI GTATCC 1 cut(s) 637
BclI TGATCA 2 cut(s) 1075, 1224
BcnI CCSGG 1 cut(s) 1071
BcoDI GTCTC 4 cut(s) 578, 757, 1581, 1589
BfaI CTAG 6 cut(s) 842, 1013, 1061, 1154, 1431, 1620
BfmI CTRYAG 1 cut(s) 368
BfrI CTTAAG 1 cut(s) 1726
BfuI GTATCC 1 cut(s) 637
BglI GCCNNNNNGGC 1 cut(s) 788
BglII AGATCT 1 cut(s) 731
BisI GCNGC 3 cut(s) 267, 479, 1267
BlsI GCNGC 3 cut(s) 268, 480, 1268
BmcAI AGTACT 1 cut(s) 1717
Bme1390I CCNGG 5 cut(s) 124, 795, 1071, 1680, 1686
Bme18I GGWCC 1 cut(s) 1682
BmeT110I CYCGRG 1 cut(s) 620
BmgBI CACGTC 1 cut(s) 1222
BmgT120I GGNCC 3 cut(s) 48, 781, 1682
BmiI GGNNCC 3 cut(s) 121, 792, 1569
BmrFI CCNGG 5 cut(s) 124, 795, 1071, 1680, 1686
BmsI GCATC 6 cut(s) 258, 264, 278, 299, 481, 1378
BpiI GAAGAC 1 cut(s) 855
BpmI CTGGAG 2 cut(s) 697, 1189
Bpu14I TTCGAA 2 cut(s) 1601, 1607
BpuMI CCSGG 1 cut(s) 1071
Bsa29I ATCGAT 1 cut(s) 272
BsaAI YACGTR 1 cut(s) 1176
BsaBI GATNNNNATC 2 cut(s) 86, 202
BsaJI CCNNGG 1 cut(s) 794
BsaXI ACNNNNNCTCC 2 cut(s) 1634, 1664
Bsc4I CCNNNNNNNGG 2 cut(s) 1454, 1685
Bse8I GATNNNNATC 2 cut(s) 86, 202
BseBI CCWGG 4 cut(s) 124, 795, 1680, 1686
BseCI ATCGAT 1 cut(s) 272
BseDI CCNNGG 1 cut(s) 794
BseGI GGATG 2 cut(s) 249, 290
BseJI GATNNNNATC 2 cut(s) 86, 202
BseLI CCNNNNNNNGG 2 cut(s) 1454, 1685
BseMII CTCAG 4 cut(s) 659, 752, 1563, 1584
BseRI GAGGAG 2 cut(s) 596, 1479
BseXI GCAGC 3 cut(s) 278, 465, 1278
BsgI GTGCAG 1 cut(s) 450
Bsh1236I CGCG 3 cut(s) 56, 640, 1145
Bsh1285I CGRYCG 2 cut(s) 90, 1096
BshFI GGCC 2 cut(s) 50, 782
BshVI ATCGAT 1 cut(s) 272
BsiEI CGRYCG 2 cut(s) 90, 1096
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 1 cut(s) 1071
BslFI GGGAC 1 cut(s) 311
BslI CCNNNNNNNGG 2 cut(s) 1454, 1685
BsmAI GTCTC 4 cut(s) 578, 757, 1581, 1589
BsmFI GGGAC 1 cut(s) 311
BsnI GGCC 2 cut(s) 50, 782
BsoBI CYCGRG 1 cut(s) 620
Bsp119I TTCGAA 2 cut(s) 1601, 1607
BspACI CCGC 5 cut(s) 5, 56, 503, 640, 1058
BspANI GGCC 2 cut(s) 50, 782
BspCNI CTCAG 4 cut(s) 660, 753, 1564, 1585
BspDI ATCGAT 1 cut(s) 272
BspFNI CGCG 3 cut(s) 56, 640, 1145
BspLI GGNNCC 3 cut(s) 121, 792, 1569
BspPI GGATC 6 cut(s) 15, 114, 127, 611, 1562, 1575
BspT104I TTCGAA 2 cut(s) 1601, 1607
BspTI CTTAAG 1 cut(s) 1726
BssECI CCNNGG 1 cut(s) 794
Bst2UI CCWGG 4 cut(s) 124, 795, 1680, 1686
Bst4CI ACNGT 4 cut(s) 372, 951, 1199, 1330
Bst6I CTCTTC 4 cut(s) 573, 1118, 1139, 1284
BstAFI CTTAAG 1 cut(s) 1726
BstAPI GCANNNNNTGC 1 cut(s) 478
BstBAI YACGTR 1 cut(s) 1176
BstBI TTCGAA 2 cut(s) 1601, 1607
BstC8I GCNNGC 1 cut(s) 470
BstDEI CTNAG 9 cut(s) 255, 588, 668, 761, 1019, 1126, 1380, 1572, 1593
BstF5I GGATG 2 cut(s) 249, 290
BstFNI CGCG 3 cut(s) 56, 640, 1145
BstHHI GCGC 1 cut(s) 640
BstMAI GTCTC 4 cut(s) 578, 757, 1581, 1589
BstMCI CGRYCG 2 cut(s) 90, 1096
BstMWI GCNNNNNNNGC 3 cut(s) 361, 478, 788
BstNI CCWGG 4 cut(s) 124, 795, 1680, 1686
BstNSI RCATGY 1 cut(s) 472
BstSCI CCNGG 5 cut(s) 122, 793, 1069, 1678, 1684
BstSFI CTRYAG 1 cut(s) 368
BstSNI TACGTA 1 cut(s) 1176
BstUI CGCG 3 cut(s) 56, 640, 1145
BstV1I GCAGC 3 cut(s) 278, 465, 1278
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 3 cut(s) 119, 731, 1567
BstYI RGATCY 3 cut(s) 119, 731, 1567
Bsu15I ATCGAT 1 cut(s) 272
BsuI GTATCC 1 cut(s) 637
BsuRI GGCC 2 cut(s) 50, 782
BsuTUI ATCGAT 1 cut(s) 272
BtgZI GCGATG 1 cut(s) 247
BtrI CACGTC 1 cut(s) 1222
BtsCI GGATG 2 cut(s) 249, 290
BtsIMutI CAGTG 3 cut(s) 758, 1335, 1671
Cac8I GCNNGC 1 cut(s) 470
CfoI GCGC 1 cut(s) 640
Cfr13I GGNCC 3 cut(s) 48, 781, 1682
ClaI ATCGAT 1 cut(s) 272
CseI GACGC 2 cut(s) 344, 812
Csp6I GTAC 2 cut(s) 1173, 1716
CviQI GTAC 2 cut(s) 1173, 1716
DdeI CTNAG 9 cut(s) 255, 588, 668, 761, 1019, 1126, 1380, 1572, 1593
DraI TTTAAA 1 cut(s) 130
Eam1104I CTCTTC 4 cut(s) 573, 1118, 1139, 1284
EarI CTCTTC 4 cut(s) 573, 1118, 1139, 1284
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 1176
Eco47I GGWCC 1 cut(s) 1682
Eco57I CTGAAG 2 cut(s) 700, 1392
Eco88I CYCGRG 1 cut(s) 620
EcoRI GAATTC 4 cut(s) 931, 1181, 1528, 1603
EcoRII CCWGG 4 cut(s) 122, 793, 1678, 1684
EcoT22I ATGCAT 1 cut(s) 474
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 1 cut(s) 311
FauI CCCGC 1 cut(s) 633
FbaI TGATCA 2 cut(s) 1075, 1224
FblI GTMKAC 2 cut(s) 661, 1435
Fnu4HI GCNGC 3 cut(s) 267, 479, 1267
FokI GGATG 2 cut(s) 236, 277
Fsp4HI GCNGC 3 cut(s) 267, 479, 1267
FspBI CTAG 6 cut(s) 842, 1013, 1061, 1154, 1431, 1620
GlaI GCGC 1 cut(s) 639
GluI GCNGC 3 cut(s) 267, 479, 1267
GsuI CTGGAG 2 cut(s) 697, 1189
HaeIII GGCC 2 cut(s) 50, 782
HapII CCGG 1 cut(s) 1071
HgaI GACGC 2 cut(s) 344, 812
HhaI GCGC 1 cut(s) 640
Hin6I GCGC 1 cut(s) 638
HinP1I GCGC 1 cut(s) 638
HincII GTYRAC 2 cut(s) 1219, 1513
HindII GTYRAC 2 cut(s) 1219, 1513
HindIII AAGCTT 3 cut(s) 362, 1519, 1723
HpaII CCGG 1 cut(s) 1071
HphI GGTGA 1 cut(s) 1085
Hpy166II GTNNAC 5 cut(s) 662, 1100, 1219, 1436, 1513
Hpy188III TCNNGA 8 cut(s) 620, 676, 868, 910, 967, 1138, 1168, 1571
Hpy8I GTNNAC 5 cut(s) 662, 1100, 1219, 1436, 1513
Hpy99I CGWCG 4 cut(s) 56, 360, 806, 1043
HpyAV CCTTC 5 cut(s) 390, 430, 555, 970, 1487
HpyCH4III ACNGT 4 cut(s) 372, 951, 1199, 1330
HpyCH4IV ACGT 5 cut(s) 1041, 1102, 1175, 1221, 1272
HpyCH4V TGCA 8 cut(s) 249, 277, 290, 431, 472, 481, 525, 1266
HpyF10VI GCNNNNNNNGC 3 cut(s) 361, 478, 788
HpyF3I CTNAG 9 cut(s) 255, 588, 668, 761, 1019, 1126, 1380, 1572, 1593
HpySE526I ACGT 5 cut(s) 1041, 1102, 1175, 1221, 1272
HspAI GCGC 1 cut(s) 638
Ksp22I TGATCA 2 cut(s) 1075, 1224
LmnI GCTCC 4 cut(s) 678, 796, 798, 1492
Lsp1109I GCAGC 3 cut(s) 278, 465, 1278
LweI GCATC 6 cut(s) 258, 264, 278, 299, 481, 1378
MaeI CTAG 6 cut(s) 842, 1013, 1061, 1154, 1431, 1620
MaeII ACGT 5 cut(s) 1041, 1102, 1175, 1221, 1272
MaeIII GTNAC 4 cut(s) 529, 736, 1273, 1297
MfeI CAATTG 1 cut(s) 219
MflI RGATCY 3 cut(s) 119, 731, 1567
MluCI AATT 6 cut(s) 114, 219, 931, 1181, 1528, 1603
MluI ACGCGT 1 cut(s) 1143
MlyI GAGTC 1 cut(s) 1583
MmeI TCCRAC 1 cut(s) 961
Mph1103I ATGCAT 1 cut(s) 474
MroXI GAANNNNTTC 2 cut(s) 1199, 1405
MseI TTAA 6 cut(s) 15, 129, 755, 1358, 1727, 1743
MslI CAYNNNNRTG 1 cut(s) 896
MspA1I CMGCKG 1 cut(s) 478
MspCI CTTAAG 1 cut(s) 1726
MspI CCGG 1 cut(s) 1071
MspR9I CCNGG 5 cut(s) 124, 795, 1071, 1680, 1686
MunI CAATTG 1 cut(s) 219
MvaI CCWGG 4 cut(s) 124, 795, 1680, 1686
MvnI CGCG 3 cut(s) 56, 640, 1145
MwoI GCNNNNNNNGC 3 cut(s) 361, 478, 788
NciI CCSGG 1 cut(s) 1071
NlaIV GGNNCC 3 cut(s) 121, 792, 1569
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 1 cut(s) 472
NspV TTCGAA 2 cut(s) 1601, 1607
PaeI GCATGC 1 cut(s) 472
PcsI WCGNNNNNNNCGW 2 cut(s) 810, 1538
PdmI GAANNNNTTC 2 cut(s) 1199, 1405
PflMI CCANNNNNTGG 1 cut(s) 1454
PfoI TCCNGGA 1 cut(s) 1678
PkrI GCNGC 3 cut(s) 268, 480, 1268
Ple19I CGATCG 1 cut(s) 90
PleI GAGTC 1 cut(s) 1582
PpsI GAGTC 1 cut(s) 1582
Ppu21I YACGTR 1 cut(s) 1176
Psp6I CCWGG 4 cut(s) 122, 793, 1678, 1684
PspGI CCWGG 4 cut(s) 122, 793, 1678, 1684
PspN4I GGNNCC 3 cut(s) 121, 792, 1569
PspPI GGNCC 3 cut(s) 48, 781, 1682
PsuI RGATCY 3 cut(s) 119, 731, 1567
PvuI CGATCG 1 cut(s) 90
PvuII CAGCTG 1 cut(s) 478
RsaI GTAC 2 cut(s) 1174, 1717
RsaNI GTAC 2 cut(s) 1173, 1716
RseI CAYNNNNRTG 1 cut(s) 896
SaqAI TTAA 6 cut(s) 15, 129, 755, 1358, 1727, 1743
SatI GCNGC 3 cut(s) 267, 479, 1267
Sau96I GGNCC 3 cut(s) 48, 781, 1682
ScaI AGTACT 1 cut(s) 1717
SchI GAGTC 1 cut(s) 1583
ScrFI CCNGG 5 cut(s) 124, 795, 1071, 1680, 1686
SfaNI GCATC 6 cut(s) 258, 264, 278, 299, 481, 1378
SfcI CTRYAG 1 cut(s) 368
SfuI TTCGAA 2 cut(s) 1601, 1607
SinI GGWCC 1 cut(s) 1682
SmiMI CAYNNNNRTG 1 cut(s) 896
SmlI CTYRAG 1 cut(s) 1726
SmoI CTYRAG 1 cut(s) 1726
SnaBI TACGTA 1 cut(s) 1176
SphI GCATGC 1 cut(s) 472
Sse9I AATT 6 cut(s) 114, 219, 931, 1181, 1528, 1603
SsiI CCGC 5 cut(s) 5, 56, 503, 640, 1058
SspI AATATT 1 cut(s) 244
SspMI CTAG 6 cut(s) 842, 1013, 1061, 1154, 1431, 1620
StyD4I CCNGG 5 cut(s) 122, 793, 1069, 1678, 1684
TaaI ACNGT 4 cut(s) 372, 951, 1199, 1330
TaiI ACGT 5 cut(s) 1044, 1105, 1178, 1224, 1275
TaqII GACCGA 2 cut(s) 1082, 1175
TasI AATT 6 cut(s) 114, 219, 931, 1181, 1528, 1603
TatI WGTACW 1 cut(s) 1715
Tru1I TTAA 6 cut(s) 15, 129, 755, 1358, 1727, 1743
Tru9I TTAA 6 cut(s) 15, 129, 755, 1358, 1727, 1743
TscAI CASTG 3 cut(s) 765, 1335, 1671
TseI GCWGC 3 cut(s) 266, 478, 1266
TspGWI ACGGA 1 cut(s) 939
TspRI CASTG 3 cut(s) 765, 1335, 1671
Van91I CCANNNNNTGG 1 cut(s) 1454
Vha464I CTTAAG 1 cut(s) 1726
VpaK11BI GGWCC 1 cut(s) 1682
XapI RAATTY 4 cut(s) 931, 1181, 1528, 1603
XceI RCATGY 1 cut(s) 472
XcmI CCANNNNNNNNNTGG 1 cut(s) 791
XmiI GTMKAC 2 cut(s) 661, 1435
XmnI GAANNNNTTC 2 cut(s) 1199, 1405
XspI CTAG 6 cut(s) 842, 1013, 1061, 1154, 1431, 1620
ZrmI AGTACT 1 cut(s) 1717
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.