MD07G1176300.v1.1

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
25554731 .. 25569497
14767 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1176300.v1.1.491

Sequence Viewer

Length: 1722 bp
ATGGCTGAACTCGCTAAAGAGCGTACACTAGAGGAAACACCGACATGGGCTGTTGCTGTGGTCTGTTTTGTGTTGCTTGCAGTTTCAATCTTCATTGAACATACGATCCACCTCATAGGAAAGTGGTTAGCAAGGAAACACAAGAGAGCTCTAGTTGAAGCACTTGAGAAGATCAAATCTGAGCTTATGCTGTTGGGATTTTTATCCTTGCTCCTAACTGTGCTGCAAGGACCAATCTCTGAGATATGCATATCAAAAAGTATTGGAGCCACTTGGCATCCCTGCAAATATAATAAGTCATCAAAATCTGGAAAGAATGGTAGGAAACTTCTTGAGTTCTTCAATCCCAGGCGCAGATTAGCAGTAAAAGGATATGATTACTGCACAGAGAAGGGAAAAGTAGCCTTTGTGTCTTCATATGGGATTCACCAACTCCATATTTTTATCTTTGTGTTAGCAGTTTTTCATGTGCTCTACTGCATCCTTACCTTGGGTTTGGGAAGATACAAGATGAGAACATGGAAGGTTTGGGAGAAAGAGACAAAATCAATTGAATACCGCCAGTTCTATAATGATCCAGAAAGGTTTAGGTTTGCAAGGGATACATCATTTGGACAAAGACATTTGAACTTCTGGAGCAAGTCACCAGTCTCCCTCTGTATTGTCTCTTTCTTTAGACAATTTTTCCACTCAGTTACAAAGGTTGATTACTTAACTCTGAGGCATGGATTTATCATGGCACATTTGGCACCAGGAAGTGAGTCAACATTTGATTTTCAGAAGTACATAAACAGATCAGTTGAAGAGGATTTCAAAGTTATTGTGGGGATCAGTCCAATTATATGGTTCTCTGCAGTGCTGTTCTTGCTGTCCAACACTTATGGATGGTATTCTTATATTTGGCTACCAACCATCCCTTTAATTATAGTCCTAACGGTTGGAACCAAACTACAAGTGATTATAACAAAGATGGGGCTGAGGATTCAGGAGAGAGGGGATGTGGTAAAGGGTGCACCTCTTGTTCAACCCAGCGATCACCTCTTTTGGTTCGGAAGCCCCCGCTTCATGCTCTATCTCCTCCACTTTGTTCTCTTTCAGAATGCATTTCAAATGGCCTTCTTTGCATGGAGTACATATGAGTTTGGGATAACTTCTTGCTTCCACCGGAGCACTGAAGACATTGTCGTCAGGCTCTCATTCGGGGTCATTGTACAAGTTTTATGCAGTTATGTGACTCTGCCTCTCTATGCTCTAGTAACTCAGATGGGTTCGACCATGAAACCTACCGTTTTCAATGAGGGAGTGGCAGCAGCACTGAAAGATTGGCACCACAAAGCCAAAAAGAACACAAATCACAGCCACCATTCACCTTCAACCACCCCATTCTCAAGCATGCCGCCAAGTCCCACGCGCGGCACGTCCCCAGTTCATCTGCTGCACAACCACAACTACCGCAGCAATGACGATGAATTTTACGTATCTCCGAGGCGATCAAACCTTGAAATGGGTCATTGGGGCACTGAAGGGTCCTCACATTCACCAAACAACAATGTTGGAGCTAGTGACGGGGATGAGATTAGGCAAAAGACCAACGTTAGGGATCTGGATCAAGAGCCTGGCTCAACGGAATTGCCTCGATCTCCTCTTCCAGTTCGTCGTACCCAGTCTCAGCATGAAGTTGCCATTAGTTCATCTGATATTTCATTTGGAAAAGGCAACTGA

Protein Analysis

574

Amino Acids

65.48

Weight (kDa)

9.43

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 7 - 482 4e-235 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 962
AasI GACNNNNNNGTC 1 cut(s) 1184
AccB1I GGYRCC 2 cut(s) 748, 1326
AccII CGCG 2 cut(s) 1411, 1413
AciI CCGC 5 cut(s) 559, 1060, 1397, 1413, 1453
AclI AACGTT 1 cut(s) 1593
AclWI GGATC 5 cut(s) 100, 569, 836, 1608, 1614
AcsI RAATTY 1 cut(s) 1469
AcuI CTGAAG 2 cut(s) 1194, 1542
AfaI GTAC 5 cut(s) 25, 785, 1132, 1212, 1660
AfiI CCNNNNNNNGG 4 cut(s) 490, 1412, 1504, 1596
AjiI CACGTC 1 cut(s) 1419
AjnI CCWGG 3 cut(s) 347, 751, 1615
AloI GAACNNNNNNTCC 2 cut(s) 90, 122
AluBI AGCT 3 cut(s) 149, 184, 1559
AluI AGCT 3 cut(s) 149, 184, 1559
Alw21I GWGCWC 4 cut(s) 151, 474, 1015, 1172
Alw26I GTCTC 4 cut(s) 533, 655, 670, 1671
Alw44I GTGCAC 1 cut(s) 1011
AlwI GGATC 5 cut(s) 100, 569, 836, 1608, 1614
AoxI GGCC 1 cut(s) 1113
ApaLI GTGCAC 1 cut(s) 1011
ApeKI GCWGC 5 cut(s) 223, 1307, 1310, 1435, 1455
ApoI RAATTY 1 cut(s) 1469
AspLEI GCGC 2 cut(s) 354, 1413
AspS9I GGNCC 2 cut(s) 230, 1527
AsuHPI GGTGA 5 cut(s) 419, 636, 1028, 1359, 1530
AvaII GGWCC 2 cut(s) 230, 1527
BaeGI GKGCMC 2 cut(s) 1015, 1520
BanI GGYRCC 2 cut(s) 748, 1326
BanII GRGCYC 1 cut(s) 151
BbsI GAAGAC 2 cut(s) 405, 1182
Bbv12I GWGCWC 4 cut(s) 151, 474, 1015, 1172
BbvCI CCTCAGC 1 cut(s) 977
BbvI GCAGC 5 cut(s) 210, 1319, 1322, 1422, 1467
BccI CCATC 4 cut(s) 879, 920, 964, 1258
BciT130I CCWGG 3 cut(s) 349, 753, 1617
BciVI GTATCC 1 cut(s) 595
BcoDI GTCTC 4 cut(s) 533, 655, 670, 1671
BfaI CTAG 4 cut(s) 29, 152, 1253, 1560
BfmI CTRYAG 1 cut(s) 852
BfuI GTATCC 1 cut(s) 595
BisI GCNGC 7 cut(s) 224, 1308, 1311, 1397, 1414, 1436, 1456
BlsI GCNGC 7 cut(s) 225, 1309, 1312, 1398, 1415, 1437, 1457
Bme1390I CCNGG 3 cut(s) 349, 753, 1617
Bme18I GGWCC 2 cut(s) 230, 1527
BmgBI CACGTC 1 cut(s) 1419
BmgT120I GGNCC 2 cut(s) 230, 1527
BmiI GGNNCC 5 cut(s) 268, 750, 943, 1328, 1528
BmrFI CCNGG 3 cut(s) 349, 753, 1617
BmrI ACTGGG 2 cut(s) 1418, 1657
BmsI GCATC 2 cut(s) 286, 489
BmuI ACTGGG 2 cut(s) 1418, 1657
BpiI GAAGAC 2 cut(s) 405, 1182
BplI GAGNNNNNCTC 2 cut(s) 1604, 1636
BpmI CTGGAG 1 cut(s) 655
Bpu10I CCTNAGC 1 cut(s) 977
BpuEI CTTGAG 3 cut(s) 185, 353, 1372
BsaAI YACGTR 1 cut(s) 1477
BsaBI GATNNNNATC 2 cut(s) 202, 1605
BsaJI CCNNGG 3 cut(s) 347, 489, 1484
BsaWI WCCGGW 1 cut(s) 1164
Bsc4I CCNNNNNNNGG 4 cut(s) 490, 1412, 1504, 1596
Bse1I ACTGG 5 cut(s) 562, 647, 1424, 1649, 1663
Bse3DI GCAATG 1 cut(s) 1465
Bse8I GATNNNNATC 2 cut(s) 202, 1605
BseBI CCWGG 3 cut(s) 349, 753, 1617
BseDI CCNNGG 3 cut(s) 347, 489, 1484
BseGI GGATG 6 cut(s) 277, 480, 890, 912, 1003, 1576
BseJI GATNNNNATC 2 cut(s) 202, 1605
BseLI CCNNNNNNNGG 4 cut(s) 490, 1412, 1504, 1596
BseMI GCAATG 1 cut(s) 1465
BseMII CTCAG 7 cut(s) 171, 231, 705, 710, 968, 1274, 1682
BseNI ACTGG 5 cut(s) 562, 647, 1424, 1649, 1663
BseRI GAGGAG 2 cut(s) 1067, 1632
BseSI GKGCMC 2 cut(s) 1015, 1520
BseXI GCAGC 5 cut(s) 210, 1319, 1322, 1422, 1467
BseYI CCCAGC 1 cut(s) 1028
BsgI GTGCAG 2 cut(s) 367, 1421
Bsh1236I CGCG 2 cut(s) 1411, 1413
BshFI GGCC 1 cut(s) 1115
BshNI GGYRCC 2 cut(s) 748, 1326
BsiHKAI GWGCWC 4 cut(s) 151, 474, 1015, 1172
BsiSI CCGG 1 cut(s) 1165
BslFI GGGAC 2 cut(s) 1389, 1405
BslI CCNNNNNNNGG 4 cut(s) 490, 1412, 1504, 1596
BsmAI GTCTC 4 cut(s) 533, 655, 670, 1671
BsmFI GGGAC 2 cut(s) 1389, 1405
BsmI GAATGC 1 cut(s) 1105
BsnI GGCC 1 cut(s) 1115
Bsp1286I GDGCHC 5 cut(s) 151, 474, 1015, 1172, 1520
Bsp1407I TGTACA 1 cut(s) 1210
BspACI CCGC 5 cut(s) 559, 1060, 1397, 1413, 1453
BspANI GGCC 1 cut(s) 1115
BspCNI CTCAG 7 cut(s) 172, 232, 704, 711, 969, 1273, 1681
BspFNI CGCG 2 cut(s) 1411, 1413
BspLI GGNNCC 5 cut(s) 268, 750, 943, 1328, 1528
BspMAI CTGCAG 1 cut(s) 856
BspPI GGATC 5 cut(s) 100, 569, 836, 1608, 1614
BspT107I GGYRCC 2 cut(s) 748, 1326
BsrDI GCAATG 1 cut(s) 1465
BsrGI TGTACA 1 cut(s) 1210
BsrI ACTGG 5 cut(s) 562, 647, 1424, 1649, 1663
BssECI CCNNGG 3 cut(s) 347, 489, 1484
BssT1I CCWWGG 1 cut(s) 489
Bst2UI CCWGG 3 cut(s) 349, 753, 1617
Bst4CI ACNGT 3 cut(s) 220, 937, 1288
Bst6I CTCTTC 2 cut(s) 798, 1650
BstAUI TGTACA 1 cut(s) 1210
BstBAI YACGTR 1 cut(s) 1477
BstC8I GCNNGC 2 cut(s) 78, 1394
BstDEI CTNAG 7 cut(s) 180, 240, 691, 719, 977, 1260, 1668
BstF5I GGATG 6 cut(s) 277, 480, 890, 912, 1003, 1576
BstFNI CGCG 2 cut(s) 1411, 1413
BstHHI GCGC 2 cut(s) 354, 1413
BstMAI GTCTC 4 cut(s) 533, 655, 670, 1671
BstMWI GCNNNNNNNGC 4 cut(s) 11, 746, 865, 1121
BstNI CCWGG 3 cut(s) 349, 753, 1617
BstNSI RCATGY 1 cut(s) 1396
BstSCI CCNGG 3 cut(s) 347, 751, 1615
BstSFI CTRYAG 1 cut(s) 852
BstSLI GKGCMC 2 cut(s) 1015, 1520
BstSNI TACGTA 1 cut(s) 1477
BstUI CGCG 2 cut(s) 1411, 1413
BstV1I GCAGC 5 cut(s) 210, 1319, 1322, 1422, 1467
BstV2I GAAGAC 2 cut(s) 405, 1182
BstX2I RGATCY 1 cut(s) 1600
BstXI CCANNNNNNTGG 1 cut(s) 843
BstYI RGATCY 1 cut(s) 1600
BsuI GTATCC 1 cut(s) 595
BsuRI GGCC 1 cut(s) 1115
BtrI CACGTC 1 cut(s) 1419
BtsCI GGATG 6 cut(s) 277, 480, 890, 912, 1003, 1576
BtsI GCAGTG 1 cut(s) 861
BtsIMutI CAGTG 4 cut(s) 861, 1170, 1313, 1518
Cac8I GCNNGC 2 cut(s) 78, 1394
CfoI GCGC 2 cut(s) 354, 1413
Cfr13I GGNCC 2 cut(s) 230, 1527
Csp6I GTAC 5 cut(s) 24, 784, 1131, 1211, 1659
CviQI GTAC 5 cut(s) 24, 784, 1131, 1211, 1659
DdeI CTNAG 7 cut(s) 180, 240, 691, 719, 977, 1260, 1668
DrdI GACNNNNNNGTC 1 cut(s) 1184
DseDI GACNNNNNNGTC 1 cut(s) 1184
Eam1104I CTCTTC 2 cut(s) 798, 1650
EarI CTCTTC 2 cut(s) 798, 1650
Ecl136II GAGCTC 1 cut(s) 149
Eco105I TACGTA 1 cut(s) 1477
Eco130I CCWWGG 1 cut(s) 489
Eco24I GRGCYC 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 230, 1527
Eco53kI GAGCTC 1 cut(s) 149
Eco57I CTGAAG 2 cut(s) 1194, 1542
EcoICRI GAGCTC 1 cut(s) 149
EcoO109I RGGNCCY 1 cut(s) 1527
EcoRII CCWGG 3 cut(s) 347, 751, 1615
EcoT14I CCWWGG 1 cut(s) 489
EcoT22I ATGCAT 2 cut(s) 251, 1105
EcoT38I GRGCYC 1 cut(s) 151
ErhI CCWWGG 1 cut(s) 489
FaqI GGGAC 2 cut(s) 1389, 1405
FauI CCCGC 1 cut(s) 1067
FauNDI CATATG 2 cut(s) 418, 1135
Fnu4HI GCNGC 7 cut(s) 224, 1308, 1311, 1397, 1414, 1436, 1456
FokI GGATG 6 cut(s) 264, 467, 897, 899, 1010, 1583
FriOI GRGCYC 1 cut(s) 151
Fsp4HI GCNGC 7 cut(s) 224, 1308, 1311, 1397, 1414, 1436, 1456
FspBI CTAG 4 cut(s) 29, 152, 1253, 1560
GlaI GCGC 2 cut(s) 353, 1412
GluI GCNGC 7 cut(s) 224, 1308, 1311, 1397, 1414, 1436, 1456
GsaI CCCAGC 1 cut(s) 1032
GsuI CTGGAG 1 cut(s) 655
HaeIII GGCC 1 cut(s) 1115
HapII CCGG 1 cut(s) 1165
HhaI GCGC 2 cut(s) 354, 1413
Hin6I GCGC 2 cut(s) 352, 1411
HinP1I GCGC 2 cut(s) 352, 1411
HincII GTYRAC 1 cut(s) 765
HindII GTYRAC 1 cut(s) 765
HinfI GANTC 4 cut(s) 424, 761, 982, 1234
HpaII CCGG 1 cut(s) 1165
HphI GGTGA 5 cut(s) 419, 636, 1028, 1359, 1530
Hpy166II GTNNAC 3 cut(s) 26, 765, 1013
Hpy188I TCNGA 9 cut(s) 181, 241, 720, 780, 1052, 1098, 1263, 1485, 1696
Hpy188III TCNNGA 7 cut(s) 309, 332, 578, 634, 986, 1604, 1610
Hpy8I GTNNAC 3 cut(s) 26, 765, 1013
Hpy99I CGWCG 1 cut(s) 1659
HpyAV CCTTC 5 cut(s) 385, 517, 1126, 1380, 1517
HpyCH4III ACNGT 3 cut(s) 220, 937, 1288
HpyCH4IV ACGT 3 cut(s) 1418, 1476, 1593
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 746, 865, 1121
HpyF3I CTNAG 7 cut(s) 180, 240, 691, 719, 977, 1260, 1668
HpySE526I ACGT 3 cut(s) 1418, 1476, 1593
HspAI GCGC 2 cut(s) 352, 1411
LmnI GCTCC 5 cut(s) 216, 266, 636, 1167, 1556
Lsp1109I GCAGC 5 cut(s) 210, 1319, 1322, 1422, 1467
LweI GCATC 2 cut(s) 286, 489
MaeI CTAG 4 cut(s) 29, 152, 1253, 1560
MaeII ACGT 3 cut(s) 1418, 1476, 1593
MaeIII GTNAC 5 cut(s) 642, 694, 1231, 1255, 1562
MboII GAAGA 8 cut(s) 82, 181, 331, 405, 513, 815, 1187, 1637
MfeI CAATTG 1 cut(s) 549
MflI RGATCY 1 cut(s) 1600
MhlI GDGCHC 5 cut(s) 151, 474, 1015, 1172, 1520
MluCI AATT 6 cut(s) 549, 680, 837, 921, 1469, 1628
MlyI GAGTC 2 cut(s) 770, 1228
MmeI TCCRAC 3 cut(s) 897, 919, 1534
Mph1103I ATGCAT 2 cut(s) 251, 1105
MseI TTAA 2 cut(s) 713, 920
MslI CAYNNNNRTG 1 cut(s) 43
MspI CCGG 1 cut(s) 1165
MspR9I CCNGG 3 cut(s) 349, 753, 1617
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 1 cut(s) 1105
MvaI CCWGG 3 cut(s) 349, 753, 1617
MvnI CGCG 2 cut(s) 1411, 1413
MwoI GCNNNNNNNGC 4 cut(s) 11, 746, 865, 1121
NdeI CATATG 2 cut(s) 418, 1135
NlaIV GGNNCC 5 cut(s) 268, 750, 943, 1328, 1528
NmuCI GTSAC 3 cut(s) 642, 1231, 1562
NsiI ATGCAT 2 cut(s) 251, 1105
NspI RCATGY 1 cut(s) 1396
PaeI GCATGC 1 cut(s) 1396
PcsI WCGNNNNNNNCGW 1 cut(s) 1415
PctI GAATGC 1 cut(s) 1105
PfeI GAWTC 2 cut(s) 424, 982
PflFI GACNNNGTC 1 cut(s) 1181
PkrI GCNGC 7 cut(s) 225, 1309, 1312, 1398, 1415, 1437, 1457
PleI GAGTC 2 cut(s) 769, 1228
PpsI GAGTC 2 cut(s) 769, 1228
Ppu21I YACGTR 1 cut(s) 1477
PpuMI RGGWCCY 1 cut(s) 1527
PsiI TTATAA 1 cut(s) 962
Psp124BI GAGCTC 1 cut(s) 151
Psp1406I AACGTT 1 cut(s) 1593
Psp5II RGGWCCY 1 cut(s) 1527
Psp6I CCWGG 3 cut(s) 347, 751, 1615
PspFI CCCAGC 1 cut(s) 1028
PspGI CCWGG 3 cut(s) 347, 751, 1615
PspN4I GGNNCC 5 cut(s) 268, 750, 943, 1328, 1528
PspPI GGNCC 2 cut(s) 230, 1527
PspPPI RGGWCCY 1 cut(s) 1527
PstI CTGCAG 1 cut(s) 856
PsuI RGATCY 1 cut(s) 1600
PsyI GACNNNGTC 1 cut(s) 1181
RsaI GTAC 5 cut(s) 25, 785, 1132, 1212, 1660
RsaNI GTAC 5 cut(s) 24, 784, 1131, 1211, 1659
RseI CAYNNNNRTG 1 cut(s) 43
SacI GAGCTC 1 cut(s) 151
SaqAI TTAA 2 cut(s) 713, 920
SatI GCNGC 7 cut(s) 224, 1308, 1311, 1397, 1414, 1436, 1456
Sau96I GGNCC 2 cut(s) 230, 1527
SchI GAGTC 2 cut(s) 770, 1228
ScrFI CCNGG 3 cut(s) 349, 753, 1617
SduI GDGCHC 5 cut(s) 151, 474, 1015, 1172, 1520
SfaNI GCATC 2 cut(s) 286, 489
SfcI CTRYAG 1 cut(s) 852
SinI GGWCC 2 cut(s) 230, 1527
SmiMI CAYNNNNRTG 1 cut(s) 43
SmlI CTYRAG 3 cut(s) 164, 332, 1387
SmoI CTYRAG 3 cut(s) 164, 332, 1387
SnaBI TACGTA 1 cut(s) 1477
SphI GCATGC 1 cut(s) 1396
Sse9I AATT 6 cut(s) 549, 680, 837, 921, 1469, 1628
SsiI CCGC 5 cut(s) 559, 1060, 1397, 1413, 1453
SspMI CTAG 4 cut(s) 29, 152, 1253, 1560
SstI GAGCTC 1 cut(s) 151
StyD4I CCNGG 3 cut(s) 347, 751, 1615
StyI CCWWGG 1 cut(s) 489
TaaI ACNGT 3 cut(s) 220, 937, 1288
TaiI ACGT 3 cut(s) 1421, 1479, 1596
TaqI TCGA 2 cut(s) 1271, 1636
TasI AATT 6 cut(s) 549, 680, 837, 921, 1469, 1628
TatI WGTACW 3 cut(s) 783, 1130, 1210
TauI GCSGC 2 cut(s) 1399, 1416
TfiI GAWTC 2 cut(s) 424, 982
Tru1I TTAA 2 cut(s) 713, 920
Tru9I TTAA 2 cut(s) 713, 920
TscAI CASTG 4 cut(s) 861, 1177, 1320, 1525
TseFI GTSAC 3 cut(s) 642, 1231, 1562
TseI GCWGC 5 cut(s) 223, 1307, 1310, 1435, 1455
Tsp45I GTSAC 3 cut(s) 642, 1231, 1562
TspGWI ACGGA 1 cut(s) 1640
TspRI CASTG 4 cut(s) 861, 1177, 1320, 1525
Tth111I GACNNNGTC 1 cut(s) 1181
VneI GTGCAC 1 cut(s) 1011
VpaK11BI GGWCC 2 cut(s) 230, 1527
XapI RAATTY 1 cut(s) 1469
XceI RCATGY 1 cut(s) 1396
XspI CTAG 4 cut(s) 29, 152, 1253, 1560
Zsp2I ATGCAT 2 cut(s) 251, 1105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.