May be involved in modulation of pathogen defense and leaf cell death
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 767 |
| AarI | CACCTGC | 1 cut(s) | 1498 |
| Acc36I | ACCTGC | 1 cut(s) | 1498 |
| AccB1I | GGYRCC | 3 cut(s) | 446, 556, 1134 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1208 |
| AccI | GTMKAC | 1 cut(s) | 510 |
| AccII | CGCG | 1 cut(s) | 546 |
| AciI | CCGC | 5 cut(s) | 357, 361, 380, 423, 1234 |
| AclWI | GGATC | 2 cut(s) | 644, 1371 |
| AcoI | YGGCCR | 3 cut(s) | 358, 420, 1484 |
| AcsI | RAATTY | 4 cut(s) | 789, 947, 1437, 1455 |
| AfaI | GTAC | 3 cut(s) | 593, 1292, 1347 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1208, 1366, 1421, 1427 |
| AflII | CTTAAG | 1 cut(s) | 994 |
| AflIII | ACRYGT | 1 cut(s) | 412 |
| AgsI | TTSAA | 8 cut(s) | 611, 622, 794, 859, 917, 958, 1080, 1442 |
| AhlI | ACTAGT | 2 cut(s) | 332, 727 |
| AjiI | CACGTC | 4 cut(s) | 45, 413, 869, 1258 |
| AjnI | CCWGG | 4 cut(s) | 450, 500, 1359, 1420 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 566, 598 |
| AluBI | AGCT | 6 cut(s) | 11, 149, 184, 757, 979, 1035 |
| AluI | AGCT | 6 cut(s) | 11, 149, 184, 757, 979, 1035 |
| Alw21I | GWGCWC | 4 cut(s) | 151, 186, 1192, 1387 |
| Alw26I | GTCTC | 2 cut(s) | 88, 293 |
| Alw44I | GTGCAC | 1 cut(s) | 1188 |
| AlwI | GGATC | 2 cut(s) | 644, 1371 |
| Ama87I | CYCGRG | 1 cut(s) | 388 |
| AoxI | GGCC | 6 cut(s) | 48, 230, 267, 358, 420, 1484 |
| ApaI | GGGCCC | 1 cut(s) | 234 |
| ApaLI | GTGCAC | 1 cut(s) | 1188 |
| ApeKI | GCWGC | 5 cut(s) | 208, 211, 425, 1032, 1142 |
| ApoI | RAATTY | 4 cut(s) | 789, 947, 1437, 1455 |
| AspLEI | GCGC | 1 cut(s) | 548 |
| AspS9I | GGNCC | 6 cut(s) | 48, 230, 231, 267, 819, 1307 |
| AsuC2I | CCSGG | 2 cut(s) | 837, 1194 |
| AsuHPI | GGTGA | 3 cut(s) | 410, 851, 1417 |
| AvaI | CYCGRG | 1 cut(s) | 388 |
| AvaII | GGWCC | 2 cut(s) | 819, 1307 |
| BaeGI | GKGCMC | 4 cut(s) | 234, 409, 451, 1192 |
| BanI | GGYRCC | 3 cut(s) | 446, 556, 1134 |
| BanII | GRGCYC | 4 cut(s) | 151, 186, 234, 837 |
| Bbv12I | GWGCWC | 4 cut(s) | 151, 186, 1192, 1387 |
| BbvI | GCAGC | 5 cut(s) | 195, 198, 437, 1044, 1154 |
| BccI | CCATC | 6 cut(s) | 95, 471, 772, 852, 1066, 1330 |
| BceAI | ACGGC | 2 cut(s) | 35, 706 |
| BciT130I | CCWGG | 4 cut(s) | 452, 502, 1361, 1422 |
| BcnI | CCSGG | 2 cut(s) | 837, 1194 |
| BcoDI | GTCTC | 2 cut(s) | 88, 293 |
| BcuI | ACTAGT | 2 cut(s) | 332, 727 |
| BfaI | CTAG | 3 cut(s) | 333, 728, 1479 |
| BfmI | CTRYAG | 2 cut(s) | 663, 758 |
| BfrI | CTTAAG | 1 cut(s) | 994 |
| BfuAI | ACCTGC | 1 cut(s) | 1498 |
| BisI | GCNGC | 9 cut(s) | 209, 212, 358, 361, 423, 426, 1033, 1143, 1235 |
| BlsI | GCNGC | 9 cut(s) | 210, 213, 359, 362, 424, 427, 1034, 1144, 1236 |
| Bme1390I | CCNGG | 6 cut(s) | 452, 502, 837, 1194, 1361, 1422 |
| Bme18I | GGWCC | 2 cut(s) | 819, 1307 |
| BmeT110I | CYCGRG | 1 cut(s) | 388 |
| BmgBI | CACGTC | 4 cut(s) | 45, 413, 869, 1258 |
| BmgT120I | GGNCC | 6 cut(s) | 48, 230, 231, 267, 819, 1307 |
| BmiI | GGNNCC | 8 cut(s) | 200, 232, 268, 448, 558, 820, 821, 1136 |
| BmrFI | CCNGG | 6 cut(s) | 452, 502, 837, 1194, 1361, 1422 |
| BmsI | GCATC | 2 cut(s) | 286, 298 |
| BpuMI | CCSGG | 2 cut(s) | 837, 1194 |
| BsaI | GGTCTC | 1 cut(s) | 88 |
| BsaJI | CCNNGG | 6 cut(s) | 450, 451, 688, 1059, 1280, 1349 |
| BsaWI | WCCGGW | 1 cut(s) | 395 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 795, 825 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1208, 1366, 1421, 1427 |
| Bse118I | RCCGGY | 1 cut(s) | 1482 |
| Bse1I | ACTGG | 3 cut(s) | 168, 517, 1185 |
| Bse3DI | GCAATG | 1 cut(s) | 1274 |
| BseBI | CCWGG | 4 cut(s) | 452, 502, 1361, 1422 |
| BseDI | CCNNGG | 6 cut(s) | 450, 451, 688, 1059, 1280, 1349 |
| BseGI | GGATG | 4 cut(s) | 277, 325, 885, 1290 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1208, 1366, 1421, 1427 |
| BseMI | GCAATG | 1 cut(s) | 1274 |
| BseMII | CTCAG | 2 cut(s) | 575, 1476 |
| BseNI | ACTGG | 3 cut(s) | 168, 517, 1185 |
| BseRI | GAGGAG | 1 cut(s) | 487 |
| BseSI | GKGCMC | 4 cut(s) | 234, 409, 451, 1192 |
| BseX3I | CGGCCG | 1 cut(s) | 358 |
| BseXI | GCAGC | 5 cut(s) | 195, 198, 437, 1044, 1154 |
| Bsh1236I | CGCG | 1 cut(s) | 546 |
| Bsh1285I | CGRYCG | 1 cut(s) | 361 |
| BshFI | GGCC | 6 cut(s) | 50, 232, 269, 360, 422, 1486 |
| BshNI | GGYRCC | 3 cut(s) | 446, 556, 1134 |
| BsiEI | CGRYCG | 1 cut(s) | 361 |
| BsiHKAI | GWGCWC | 4 cut(s) | 151, 186, 1192, 1387 |
| BsiHKCI | CYCGRG | 1 cut(s) | 388 |
| BsiSI | CCGG | 5 cut(s) | 396, 429, 837, 1194, 1483 |
| BslFI | GGGAC | 5 cut(s) | 763, 795, 832, 1201, 1303 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1208, 1366, 1421, 1427 |
| BsmAI | GTCTC | 2 cut(s) | 88, 293 |
| BsmFI | GGGAC | 5 cut(s) | 763, 795, 832, 1201, 1303 |
| BsmI | GAATGC | 2 cut(s) | 913, 1171 |
| BsnI | GGCC | 6 cut(s) | 50, 232, 269, 360, 422, 1486 |
| Bso31I | GGTCTC | 1 cut(s) | 88 |
| BsoBI | CYCGRG | 1 cut(s) | 388 |
| Bsp120I | GGGCCC | 1 cut(s) | 230 |
| Bsp1286I | GDGCHC | 8 cut(s) | 151, 186, 234, 409, 451, 837, 1192, 1387 |
| Bsp143I | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| BspACI | CCGC | 5 cut(s) | 357, 361, 380, 423, 1234 |
| BspANI | GGCC | 6 cut(s) | 50, 232, 269, 360, 422, 1486 |
| BspCNI | CTCAG | 2 cut(s) | 574, 1475 |
| BspFNI | CGCG | 1 cut(s) | 546 |
| BspHI | TCATGA | 1 cut(s) | 732 |
| BspLI | GGNNCC | 8 cut(s) | 200, 232, 268, 448, 558, 820, 821, 1136 |
| BspMI | ACCTGC | 1 cut(s) | 1498 |
| BspPI | GGATC | 2 cut(s) | 644, 1371 |
| BspT107I | GGYRCC | 3 cut(s) | 446, 556, 1134 |
| BspTI | CTTAAG | 1 cut(s) | 994 |
| BspTNI | GGTCTC | 1 cut(s) | 88 |
| BsrDI | GCAATG | 1 cut(s) | 1274 |
| BsrFI | RCCGGY | 1 cut(s) | 1482 |
| BsrI | ACTGG | 3 cut(s) | 168, 517, 1185 |
| BssAI | RCCGGY | 1 cut(s) | 1482 |
| BssECI | CCNNGG | 6 cut(s) | 450, 451, 688, 1059, 1280, 1349 |
| BssMI | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| BssT1I | CCWWGG | 2 cut(s) | 1059, 1280 |
| Bst2UI | CCWGG | 4 cut(s) | 452, 502, 1361, 1422 |
| Bst4CI | ACNGT | 5 cut(s) | 220, 304, 508, 530, 1350 |
| Bst6I | CTCTTC | 4 cut(s) | 606, 854, 1050, 1368 |
| BstAFI | CTTAAG | 1 cut(s) | 994 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1276 |
| BstC8I | GCNNGC | 2 cut(s) | 1169, 1484 |
| BstDEI | CTNAG | 2 cut(s) | 561, 1462 |
| BstDSI | CCRYGG | 2 cut(s) | 688, 1349 |
| BstEII | GGTNACC | 1 cut(s) | 839 |
| BstF5I | GGATG | 4 cut(s) | 277, 325, 885, 1290 |
| BstFNI | CGCG | 1 cut(s) | 546 |
| BstHHI | GCGC | 1 cut(s) | 548 |
| BstKTI | GATC | 7 cut(s) | 26, 117, 174, 605, 639, 738, 1366 |
| BstMAI | GTCTC | 2 cut(s) | 88, 293 |
| BstMBI | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| BstMCI | CGRYCG | 1 cut(s) | 361 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 554, 929, 1276 |
| BstNI | CCWGG | 4 cut(s) | 452, 502, 1361, 1422 |
| BstNSI | RCATGY | 2 cut(s) | 1157, 1216 |
| BstPI | GGTNACC | 1 cut(s) | 839 |
| BstSCI | CCNGG | 6 cut(s) | 450, 500, 835, 1192, 1359, 1420 |
| BstSFI | CTRYAG | 2 cut(s) | 663, 758 |
| BstSLI | GKGCMC | 4 cut(s) | 234, 409, 451, 1192 |
| BstUI | CGCG | 1 cut(s) | 546 |
| BstV1I | GCAGC | 5 cut(s) | 195, 198, 437, 1044, 1154 |
| BstZI | CGGCCG | 1 cut(s) | 358 |
| BsuRI | GGCC | 6 cut(s) | 50, 232, 269, 360, 422, 1486 |
| BtgI | CCRYGG | 2 cut(s) | 688, 1349 |
| BtrI | CACGTC | 4 cut(s) | 45, 413, 869, 1258 |
| BtsCI | GGATG | 4 cut(s) | 277, 325, 885, 1290 |
| BtsIMutI | CAGTG | 2 cut(s) | 161, 1192 |
| BveI | ACCTGC | 1 cut(s) | 1498 |
| Cac8I | GCNNGC | 2 cut(s) | 1169, 1484 |
| CciI | TCATGA | 1 cut(s) | 732 |
| CciNI | GCGGCCGC | 1 cut(s) | 358 |
| CfoI | GCGC | 1 cut(s) | 548 |
| Cfr10I | RCCGGY | 1 cut(s) | 1482 |
| Cfr13I | GGNCC | 6 cut(s) | 48, 230, 231, 267, 819, 1307 |
| CsiI | ACCWGGT | 1 cut(s) | 1420 |
| Csp6I | GTAC | 3 cut(s) | 592, 1291, 1346 |
| CviAII | CATG | 9 cut(s) | 187, 282, 733, 971, 1154, 1208, 1213, 1331, 1427 |
| CviQI | GTAC | 3 cut(s) | 592, 1291, 1346 |
| DdeI | CTNAG | 2 cut(s) | 561, 1462 |
| DpnI | GATC | 7 cut(s) | 25, 116, 173, 604, 638, 737, 1365 |
| DpnII | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| EaeI | YGGCCR | 3 cut(s) | 358, 420, 1484 |
| EagI | CGGCCG | 1 cut(s) | 358 |
| Eam1104I | CTCTTC | 4 cut(s) | 606, 854, 1050, 1368 |
| EarI | CTCTTC | 4 cut(s) | 606, 854, 1050, 1368 |
| Ecl136II | GAGCTC | 2 cut(s) | 149, 184 |
| EclXI | CGGCCG | 1 cut(s) | 358 |
| Eco130I | CCWWGG | 2 cut(s) | 1059, 1280 |
| Eco24I | GRGCYC | 4 cut(s) | 151, 186, 234, 837 |
| Eco31I | GGTCTC | 1 cut(s) | 88 |
| Eco47I | GGWCC | 2 cut(s) | 819, 1307 |
| Eco52I | CGGCCG | 1 cut(s) | 358 |
| Eco53kI | GAGCTC | 2 cut(s) | 149, 184 |
| Eco88I | CYCGRG | 1 cut(s) | 388 |
| Eco91I | GGTNACC | 1 cut(s) | 839 |
| EcoICRI | GAGCTC | 2 cut(s) | 149, 184 |
| EcoO109I | RGGNCCY | 2 cut(s) | 230, 819 |
| EcoO65I | GGTNACC | 1 cut(s) | 839 |
| EcoRI | GAATTC | 1 cut(s) | 1437 |
| EcoRII | CCWGG | 4 cut(s) | 450, 500, 1359, 1420 |
| EcoT14I | CCWWGG | 2 cut(s) | 1059, 1280 |
| EcoT22I | ATGCAT | 1 cut(s) | 1272 |
| EcoT38I | GRGCYC | 4 cut(s) | 151, 186, 234, 837 |
| ErhI | CCWWGG | 2 cut(s) | 1059, 1280 |
| FaeI | CATG | 9 cut(s) | 190, 285, 736, 974, 1157, 1211, 1216, 1334, 1430 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 950, 982 |
| FaqI | GGGAC | 5 cut(s) | 763, 795, 832, 1201, 1303 |
| FatI | CATG | 9 cut(s) | 186, 281, 732, 970, 1153, 1207, 1212, 1330, 1426 |
| FblI | GTMKAC | 1 cut(s) | 510 |
| Fnu4HI | GCNGC | 9 cut(s) | 209, 212, 358, 361, 423, 426, 1033, 1143, 1235 |
| FokI | GGATG | 4 cut(s) | 264, 332, 872, 1297 |
| FriOI | GRGCYC | 4 cut(s) | 151, 186, 234, 837 |
| Fsp4HI | GCNGC | 9 cut(s) | 209, 212, 358, 361, 423, 426, 1033, 1143, 1235 |
| FspBI | CTAG | 3 cut(s) | 333, 728, 1479 |
| GlaI | GCGC | 1 cut(s) | 547 |
| GluI | GCNGC | 9 cut(s) | 209, 212, 358, 361, 423, 426, 1033, 1143, 1235 |
| HaeIII | GGCC | 6 cut(s) | 50, 232, 269, 360, 422, 1486 |
| HapII | CCGG | 5 cut(s) | 396, 429, 837, 1194, 1483 |
| HhaI | GCGC | 1 cut(s) | 548 |
| Hin1II | CATG | 9 cut(s) | 190, 285, 736, 974, 1157, 1211, 1216, 1334, 1430 |
| Hin6I | GCGC | 1 cut(s) | 546 |
| HinP1I | GCGC | 1 cut(s) | 546 |
| HinfI | GANTC | 3 cut(s) | 341, 565, 1316 |
| HpaII | CCGG | 5 cut(s) | 396, 429, 837, 1194, 1483 |
| HphI | GGTGA | 3 cut(s) | 410, 851, 1417 |
| Hpy166II | GTNNAC | 4 cut(s) | 511, 936, 1190, 1408 |
| Hpy188I | TCNGA | 7 cut(s) | 119, 241, 340, 346, 564, 906, 1249 |
| Hpy188III | TCNNGA | 5 cut(s) | 388, 586, 733, 794, 1367 |
| Hpy8I | GTNNAC | 4 cut(s) | 511, 936, 1190, 1408 |
| Hpy99I | CGWCG | 2 cut(s) | 46, 414 |
| HpyAV | CCTTC | 4 cut(s) | 116, 310, 360, 1298 |
| HpyCH4III | ACNGT | 5 cut(s) | 220, 304, 508, 530, 1350 |
| HpyCH4IV | ACGT | 5 cut(s) | 44, 412, 697, 868, 1257 |
| HpyCH4V | TGCA | 6 cut(s) | 249, 311, 1032, 1190, 1270, 1493 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 554, 929, 1276 |
| HpyF3I | CTNAG | 2 cut(s) | 561, 1462 |
| HpySE526I | ACGT | 5 cut(s) | 44, 412, 697, 868, 1257 |
| Hsp92II | CATG | 9 cut(s) | 190, 285, 736, 974, 1157, 1211, 1216, 1334, 1430 |
| HspAI | GCGC | 1 cut(s) | 546 |
| KflI | GGGWCCC | 1 cut(s) | 819 |
| KroI | GCCGGC | 1 cut(s) | 1482 |
| KroNI | GCCGGC | 1 cut(s) | 1484 |
| Kzo9I | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| LmnI | GCTCC | 1 cut(s) | 31 |
| Lsp1109I | GCAGC | 5 cut(s) | 195, 198, 437, 1044, 1154 |
| LweI | GCATC | 2 cut(s) | 286, 298 |
| MabI | ACCWGGT | 1 cut(s) | 1420 |
| MaeI | CTAG | 3 cut(s) | 333, 728, 1479 |
| MaeII | ACGT | 5 cut(s) | 44, 412, 697, 868, 1257 |
| MaeIII | GTNAC | 3 cut(s) | 839, 1039, 1063 |
| MalI | GATC | 7 cut(s) | 25, 116, 173, 604, 638, 737, 1365 |
| MboI | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| MboII | GAAGA | 9 cut(s) | 148, 335, 623, 841, 869, 995, 1037, 1220, 1385 |
| MhlI | GDGCHC | 8 cut(s) | 151, 186, 234, 409, 451, 837, 1192, 1387 |
| MluCI | AATT | 5 cut(s) | 491, 789, 947, 1437, 1455 |
| MlyI | GAGTC | 2 cut(s) | 574, 1325 |
| MmeI | TCCRAC | 2 cut(s) | 108, 1205 |
| MnlI | CCTC | 9 cut(s) | 212, 465, 570, 607, 654, 792, 1059, 1363, 1425 |
| Mph1103I | ATGCAT | 1 cut(s) | 1272 |
| MroNI | GCCGGC | 1 cut(s) | 1482 |
| MseI | TTAA | 6 cut(s) | 537, 597, 786, 813, 995, 1101 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1335, 1501 |
| MspA1I | CMGCKG | 1 cut(s) | 357 |
| MspCI | CTTAAG | 1 cut(s) | 994 |
| MspI | CCGG | 5 cut(s) | 396, 429, 837, 1194, 1483 |
| MspR9I | CCNGG | 6 cut(s) | 452, 502, 837, 1194, 1361, 1422 |
| Mva1269I | GAATGC | 2 cut(s) | 913, 1171 |
| MvaI | CCWGG | 4 cut(s) | 452, 502, 1361, 1422 |
| MvnI | CGCG | 1 cut(s) | 546 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 554, 929, 1276 |
| NaeI | GCCGGC | 1 cut(s) | 1484 |
| NciI | CCSGG | 2 cut(s) | 837, 1194 |
| NdeII | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| NgoMIV | GCCGGC | 1 cut(s) | 1482 |
| NlaIII | CATG | 9 cut(s) | 190, 285, 736, 974, 1157, 1211, 1216, 1334, 1430 |
| NlaIV | GGNNCC | 8 cut(s) | 200, 232, 268, 448, 558, 820, 821, 1136 |
| NmuCI | GTSAC | 1 cut(s) | 839 |
| NotI | GCGGCCGC | 1 cut(s) | 358 |
| NsiI | ATGCAT | 1 cut(s) | 1272 |
| NspI | RCATGY | 2 cut(s) | 1157, 1216 |
| PaeR7I | CTCGAG | 1 cut(s) | 388 |
| PagI | TCATGA | 1 cut(s) | 732 |
| PaqCI | CACCTGC | 1 cut(s) | 1498 |
| PasI | CCCWGGG | 1 cut(s) | 451 |
| PctI | GAATGC | 2 cut(s) | 913, 1171 |
| PdiI | GCCGGC | 1 cut(s) | 1484 |
| PfeI | GAWTC | 1 cut(s) | 341 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1208 |
| PkrI | GCNGC | 9 cut(s) | 210, 213, 359, 362, 424, 427, 1034, 1144, 1236 |
| PleI | GAGTC | 2 cut(s) | 573, 1324 |
| PpsI | GAGTC | 2 cut(s) | 573, 1324 |
| PpuMI | RGGWCCY | 1 cut(s) | 819 |
| PsiI | TTATAA | 1 cut(s) | 767 |
| Psp124BI | GAGCTC | 2 cut(s) | 151, 186 |
| Psp5II | RGGWCCY | 1 cut(s) | 819 |
| Psp6I | CCWGG | 4 cut(s) | 450, 500, 1359, 1420 |
| PspEI | GGTNACC | 1 cut(s) | 839 |
| PspGI | CCWGG | 4 cut(s) | 450, 500, 1359, 1420 |
| PspN4I | GGNNCC | 8 cut(s) | 200, 232, 268, 448, 558, 820, 821, 1136 |
| PspOMI | GGGCCC | 1 cut(s) | 230 |
| PspPI | GGNCC | 6 cut(s) | 48, 230, 231, 267, 819, 1307 |
| PspPPI | RGGWCCY | 1 cut(s) | 819 |
| RsaI | GTAC | 3 cut(s) | 593, 1292, 1347 |
| RsaNI | GTAC | 3 cut(s) | 592, 1291, 1346 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1335, 1501 |
| SacI | GAGCTC | 2 cut(s) | 151, 186 |
| SaqAI | TTAA | 6 cut(s) | 537, 597, 786, 813, 995, 1101 |
| SatI | GCNGC | 9 cut(s) | 209, 212, 358, 361, 423, 426, 1033, 1143, 1235 |
| Sau3AI | GATC | 7 cut(s) | 23, 114, 171, 602, 636, 735, 1363 |
| Sau96I | GGNCC | 6 cut(s) | 48, 230, 231, 267, 819, 1307 |
| SchI | GAGTC | 2 cut(s) | 574, 1325 |
| ScrFI | CCNGG | 6 cut(s) | 452, 502, 837, 1194, 1361, 1422 |
| SduI | GDGCHC | 8 cut(s) | 151, 186, 234, 409, 451, 837, 1192, 1387 |
| SexAI | ACCWGGT | 1 cut(s) | 1420 |
| SfaNI | GCATC | 2 cut(s) | 286, 298 |
| SfcI | CTRYAG | 2 cut(s) | 663, 758 |
| Sfr274I | CTCGAG | 1 cut(s) | 388 |
| SinI | GGWCC | 2 cut(s) | 819, 1307 |
| SlaI | CTCGAG | 1 cut(s) | 388 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1335, 1501 |
| SmlI | CTYRAG | 2 cut(s) | 388, 994 |
| SmoI | CTYRAG | 2 cut(s) | 388, 994 |
| SpeI | ACTAGT | 2 cut(s) | 332, 727 |
| Sse9I | AATT | 5 cut(s) | 491, 789, 947, 1437, 1455 |
| SsiI | CCGC | 5 cut(s) | 357, 361, 380, 423, 1234 |
| SspMI | CTAG | 3 cut(s) | 333, 728, 1479 |
| SstI | GAGCTC | 2 cut(s) | 151, 186 |
| StyD4I | CCNGG | 6 cut(s) | 450, 500, 835, 1192, 1359, 1420 |
| StyI | CCWWGG | 2 cut(s) | 1059, 1280 |
| TaaI | ACNGT | 5 cut(s) | 220, 304, 508, 530, 1350 |
| TaiI | ACGT | 5 cut(s) | 47, 415, 700, 871, 1260 |
| TaqI | TCGA | 4 cut(s) | 96, 306, 389, 1435 |
| TasI | AATT | 5 cut(s) | 491, 789, 947, 1437, 1455 |
| TatI | WGTACW | 1 cut(s) | 591 |
| TauI | GCSGC | 4 cut(s) | 360, 363, 425, 1237 |
| TfiI | GAWTC | 1 cut(s) | 341 |
| Tru1I | TTAA | 6 cut(s) | 537, 597, 786, 813, 995, 1101 |
| Tru9I | TTAA | 6 cut(s) | 537, 597, 786, 813, 995, 1101 |
| TscAI | CASTG | 2 cut(s) | 168, 1192 |
| TseFI | GTSAC | 1 cut(s) | 839 |
| TseI | GCWGC | 5 cut(s) | 208, 211, 425, 1032, 1142 |
| Tsp45I | GTSAC | 1 cut(s) | 839 |
| TspDTI | ATGAA | 8 cut(s) | 98, 171, 336, 690, 960, 1100, 1214, 1317 |
| TspGWI | ACGGA | 1 cut(s) | 453 |
| TspRI | CASTG | 2 cut(s) | 168, 1192 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1208 |
| Vha464I | CTTAAG | 1 cut(s) | 994 |
| VneI | GTGCAC | 1 cut(s) | 1188 |
| VpaK11BI | GGWCC | 2 cut(s) | 819, 1307 |
| XapI | RAATTY | 4 cut(s) | 789, 947, 1437, 1455 |
| XceI | RCATGY | 2 cut(s) | 1157, 1216 |
| XhoI | CTCGAG | 1 cut(s) | 388 |
| XmiI | GTMKAC | 1 cut(s) | 510 |
| XspI | CTAG | 3 cut(s) | 333, 728, 1479 |
| Zsp2I | ATGCAT | 1 cut(s) | 1272 |