MD11G1132700.v1.1

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
12137704 .. 12146433
8730 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1132700.v1.1.491

Sequence Viewer

Length: 1794 bp
ATGGCAGCGGCAACGTCTGGAAGATCGTTAGAGCAAACGCCGACGTGGGCTGTTGCCGTAGTCTGTTTTGTTTTGGTCTTGATTTCAATAATCATTGAACACATAATCGAACTTATAGCAAAGTGGTTAAAGAAGAAACACAAAAGCGCCCTTTACGAAGCACTAGAAAAGATCAAATCAGAGCTTATGTTATTGGGGTTCATATCCTTGCTCTTAACTGTGGGACAAGGACCAATATCAAACATATGCATATCACAGAAAATTGGCAACACTTGGCATCCGTGTGGCAAGAAGCAAGAAGACAAATTGAATAAGGAAGAGGATTTGGAGTATGTGGATGAAACCCCGAGCAGGAGACTGCTCTCTCTGTTTAACGAGACGGGCGGTGGCTCACGCCGTGTTCTGGCTGCTGCTGGCACCGACAAATGTTCAGCAACGGGTAAAGTACCTTTTATATCTGCGGATGGTATTCATCAACTGCACATTTTTATCTTCGTGTTGGCTGTTTTCCATGTCCTTTATTGCATCCTCACAATGGCTTTAGGAAGAGCCAAGATGGGAAGTTGGAAGCGGTGGGAAAAGGAAACAAGAACAGTTGAATATCAATTTTCTCATGACCCAGAGAGATTCAGGTTTGCAAGGGACACATCTTTTGGGAGGAGGCATATGAGTTTCTGGACCAAAACACCTTTCCTTATGTGGATAGTTTGTTTTTTTAGACAATTTGTAAGGTCCGTTCCCAAAGTGGATTACTTAACCTTGCGGCATGGGTTTATCATGGCACATTTGGCACCCCAAAGCCATCAGAATTTCAATTTCCAAAAATACATAAACAGATCACTTGAAGAGGATTTCAAGGTAGTTGTGGGAATCAGCCCTCCAATTTGGTTCTTTGCGGTGATATTCATACTTTTTAACACCCACGGCTGGTATACTTACTATTGGCTACCGTTCATCCCATTGATTATCATCCTCTTGGTGGGGACCAAGCTACAGGTGATCATCACGAAAATGGGTCTTCGAATTCAAGAAAGCGGAGAGGTTGTAAAGGGGCTTCCTGTGGTTCAACCTGGTGATCATCTCTTTTGGCTCAACCGCCCTCGTCTCATTCTCTACCTCATCAACTTTGTTCTCTTTCAGAATGCCTTCCAGCTTGCTTTCTTTGCATGGAGTTGGTATGAATTTAGCTTGAAATCTTGTTTTCACGAGCACACTGAGGACGTGGTCATCAGAGTTTCAATGGGGATCCTCATACAGATTCTCTGCAGTTATGTCACTCTACCCCTCTATGCCCTTGTCACACAGATGGGCTCAACCATGAAACCAACCATATTCAATGAAAGAGTAGCCGCAGCTTTACGCAACTGGCATCACACAGCCAGGAAGCACATAAAGCAGAACAAAGGCTCCGTAACCCCAATGTCTAGCAGACCAGTCACTCCATCCCACCACACGTCCCCCGTCCACCTCCTTCGGAACTATCGGAACGAAGTGGATAGTTTCCATGCATCACCAAGAAGATCAAATTTCGAGGGTGAACGTTGGGCCAACGAATCACCCTCCCCCTCACACCACCTCCATGTAGATGGCAGTTCATCCTCTTACCACCACCATATTGAAATGGGAGATGTAGACCGTGAGAGGGTTGATGTCAATGAACAAAATTCGGTTGATGGGAAAACTACAATAACTGATACTAGTATTACTGTCATGGAACCTGCTCAAACACAACACGAAATTAACATGGAGCGGTCGAAAGACTTCTCATTTGACAAGAGGCAACCTACACAATAG

Protein Analysis

598

Amino Acids

68.79

Weight (kDa)

9.18

Isoelectric Point (pI)

47.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 7 - 494 2.5e-247 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1726
AccB1I GGYRCC 2 cut(s) 416, 790
AccBSI CCGCTC 1 cut(s) 1750
AccI GTMKAC 2 cut(s) 932, 1632
AclI AACGTT 1 cut(s) 1540
AclWI GGATC 2 cut(s) 1240, 1253
AcsI RAATTY 5 cut(s) 808, 1023, 1181, 1525, 1663
AdeI CACNNNGTG 1 cut(s) 398
AfaI GTAC 1 cut(s) 447
AfiI CCNNNNNNNGG 6 cut(s) 351, 403, 535, 927, 979, 1642
AflIII ACRYGT 1 cut(s) 1452
AhlI ACTAGT 1 cut(s) 1697
AjiI CACGTC 3 cut(s) 45, 1222, 1455
AjnI CCWGG 2 cut(s) 1069, 1379
AjuI GAANNNNNNNTTGG 2 cut(s) 674, 706
AloI GAACNNNNNNTCC 2 cut(s) 1391, 1423
AluBI AGCT 5 cut(s) 184, 991, 1153, 1188, 1355
AluI AGCT 5 cut(s) 184, 991, 1153, 1188, 1355
Alw21I GWGCWC 1 cut(s) 1212
Alw26I GTCTC 3 cut(s) 349, 371, 1109
AlwI GGATC 2 cut(s) 1240, 1253
Ama87I CYCGRG 1 cut(s) 346
AoxI GGCC 1 cut(s) 1545
ApeKI GCWGC 4 cut(s) 5, 407, 410, 1352
ApoI RAATTY 5 cut(s) 808, 1023, 1181, 1525, 1663
ArsI GACNNNNNNTTYG 4 cut(s) 635, 667, 1751, 1783
Asp700I GAANNNNTTC 2 cut(s) 1145, 1760
AspLEI GCGC 1 cut(s) 149
AspS9I GGNCC 5 cut(s) 230, 678, 732, 984, 1545
AsuHPI GGTGA 6 cut(s) 910, 1009, 1085, 1503, 1547, 1548
AsuII TTCGAA 1 cut(s) 1021
AvaI CYCGRG 1 cut(s) 346
AvaII GGWCC 4 cut(s) 230, 678, 732, 984
BamHI GGATCC 1 cut(s) 1245
BanI GGYRCC 2 cut(s) 416, 790
BanII GRGCYC 1 cut(s) 1313
BarI GAAGNNNNNNTAC 2 cut(s) 1038, 1070
BauI CACGAG 1 cut(s) 1205
BbsI GAAGAC 2 cut(s) 306, 1010
Bbv12I GWGCWC 1 cut(s) 1212
BbvI GCAGC 4 cut(s) 17, 394, 397, 1364
BccI CCATC 7 cut(s) 458, 550, 810, 1300, 1450, 1580, 1667
BceAI ACGGC 3 cut(s) 41, 381, 940
BciT130I CCWGG 2 cut(s) 1071, 1381
BclI TGATCA 2 cut(s) 999, 1075
BcoDI GTCTC 3 cut(s) 349, 371, 1109
BcuI ACTAGT 1 cut(s) 1697
BfaI CTAG 3 cut(s) 164, 1425, 1698
BfmI CTRYAG 2 cut(s) 992, 1264
BfoI RGCGCY 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 1726
BisI GCNGC 7 cut(s) 6, 9, 408, 411, 764, 1350, 1353
BlsI GCNGC 7 cut(s) 7, 10, 409, 412, 765, 1351, 1354
Bme1390I CCNGG 2 cut(s) 1071, 1381
Bme18I GGWCC 4 cut(s) 230, 678, 732, 984
BmeT110I CYCGRG 1 cut(s) 346
BmgBI CACGTC 3 cut(s) 45, 1222, 1455
BmgT120I GGNCC 5 cut(s) 230, 678, 732, 984, 1545
BmiI GGNNCC 6 cut(s) 418, 792, 985, 1247, 1408, 1716
BmrFI CCNGG 2 cut(s) 1071, 1381
BmsI GCATC 4 cut(s) 286, 534, 1378, 1517
BpiI GAAGAC 2 cut(s) 306, 1010
Bpu14I TTCGAA 1 cut(s) 1021
BsaBI GATNNNNATC 1 cut(s) 968
BsaJI CCNNGG 1 cut(s) 922
BsaXI ACNNNNNCTCC 6 cut(s) 1029, 1059, 1391, 1421, 1560, 1590
Bsc4I CCNNNNNNNGG 6 cut(s) 351, 403, 535, 927, 979, 1642
Bse1I ACTGG 2 cut(s) 1370, 1433
Bse8I GATNNNNATC 1 cut(s) 968
BseBI CCWGG 2 cut(s) 1071, 1381
BseDI CCNNGG 1 cut(s) 922
BseGI GGATG 8 cut(s) 277, 343, 469, 525, 954, 969, 1442, 1595
BseJI GATNNNNATC 1 cut(s) 968
BseLI CCNNNNNNNGG 6 cut(s) 351, 403, 535, 927, 979, 1642
BseMII CTCAG 1 cut(s) 1206
BseNI ACTGG 2 cut(s) 1370, 1433
BseRI GAGGAG 1 cut(s) 673
BseXI GCAGC 4 cut(s) 17, 394, 397, 1364
BsgI GTGCAG 1 cut(s) 464
Bsh1285I CGRYCG 1 cut(s) 1754
BshFI GGCC 1 cut(s) 1547
BshNI GGYRCC 2 cut(s) 416, 790
BsiEI CGRYCG 1 cut(s) 1754
BsiHKAI GWGCWC 1 cut(s) 1212
BsiHKCI CYCGRG 1 cut(s) 346
BslFI GGGAC 4 cut(s) 237, 656, 997, 1441
BslI CCNNNNNNNGG 6 cut(s) 351, 403, 535, 927, 979, 1642
BsmAI GTCTC 3 cut(s) 349, 371, 1109
BsmBI CGTCTC 2 cut(s) 371, 1109
BsmFI GGGAC 4 cut(s) 237, 656, 997, 1441
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 1 cut(s) 1547
BsoBI CYCGRG 1 cut(s) 346
Bsp119I TTCGAA 1 cut(s) 1021
Bsp1286I GDGCHC 2 cut(s) 1212, 1313
Bsp143I GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
BspANI GGCC 1 cut(s) 1547
BspCNI CTCAG 1 cut(s) 1207
BspHI TCATGA 1 cut(s) 613
BspLI GGNNCC 6 cut(s) 418, 792, 985, 1247, 1408, 1716
BspMAI CTGCAG 1 cut(s) 1268
BspMI ACCTGC 1 cut(s) 1726
BspPI GGATC 2 cut(s) 1240, 1253
BspQI GCTCTTC 1 cut(s) 541
BspT104I TTCGAA 1 cut(s) 1021
BspT107I GGYRCC 2 cut(s) 416, 790
BsrBI CCGCTC 1 cut(s) 1750
BsrI ACTGG 2 cut(s) 1370, 1433
BssECI CCNNGG 1 cut(s) 922
BssMI GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
BssNAI GTATAC 1 cut(s) 933
BssSI CACGAG 1 cut(s) 1205
Bst1107I GTATAC 1 cut(s) 933
Bst2BI CACGAG 1 cut(s) 1205
Bst2UI CCWGG 2 cut(s) 1071, 1381
Bst4CI ACNGT 5 cut(s) 220, 595, 951, 1637, 1708
Bst6I CTCTTC 3 cut(s) 312, 541, 840
BstBI TTCGAA 1 cut(s) 1021
BstC8I GCNNGC 2 cut(s) 415, 1155
BstDEI CTNAG 1 cut(s) 1215
BstDSI CCRYGG 1 cut(s) 922
BstF5I GGATG 8 cut(s) 277, 343, 469, 525, 954, 969, 1442, 1595
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 1 cut(s) 149
BstKTI GATC 7 cut(s) 26, 174, 839, 1002, 1078, 1248, 1523
BstMAI GTCTC 3 cut(s) 349, 371, 1109
BstMBI GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
BstMCI CGRYCG 1 cut(s) 1754
BstMWI GCNNNNNNNGC 3 cut(s) 788, 1163, 1393
BstNI CCWGG 2 cut(s) 1071, 1381
BstSCI CCNGG 2 cut(s) 1069, 1379
BstSFI CTRYAG 2 cut(s) 992, 1264
BstV1I GCAGC 4 cut(s) 17, 394, 397, 1364
BstV2I GAAGAC 2 cut(s) 306, 1010
BstX2I RGATCY 1 cut(s) 1245
BstXI CCANNNNNNTGG 1 cut(s) 1586
BstYI RGATCY 1 cut(s) 1245
BstZ17I GTATAC 1 cut(s) 933
BsuRI GGCC 1 cut(s) 1547
BtgI CCRYGG 1 cut(s) 922
BtrI CACGTC 3 cut(s) 45, 1222, 1455
BtsCI GGATG 8 cut(s) 277, 343, 469, 525, 954, 969, 1442, 1595
BtsIMutI CAGTG 1 cut(s) 1212
BveI ACCTGC 1 cut(s) 1726
Cac8I GCNNGC 2 cut(s) 415, 1155
CciI TCATGA 1 cut(s) 613
CfoI GCGC 1 cut(s) 149
Cfr13I GGNCC 5 cut(s) 230, 678, 732, 984, 1545
CsiI ACCWGGT 1 cut(s) 1069
Csp6I GTAC 1 cut(s) 446
CviQI GTAC 1 cut(s) 446
DdeI CTNAG 1 cut(s) 1215
DpnI GATC 7 cut(s) 25, 173, 838, 1001, 1077, 1247, 1522
DpnII GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
DraIII CACNNNGTG 1 cut(s) 398
Eam1104I CTCTTC 3 cut(s) 312, 541, 840
EarI CTCTTC 3 cut(s) 312, 541, 840
Eco24I GRGCYC 1 cut(s) 1313
Eco47I GGWCC 4 cut(s) 230, 678, 732, 984
Eco88I CYCGRG 1 cut(s) 346
EcoRI GAATTC 1 cut(s) 1023
EcoRII CCWGG 2 cut(s) 1069, 1379
EcoT22I ATGCAT 2 cut(s) 251, 1510
EcoT38I GRGCYC 1 cut(s) 1313
Esp3I CGTCTC 2 cut(s) 371, 1109
FaqI GGGAC 4 cut(s) 237, 656, 997, 1441
FauNDI CATATG 2 cut(s) 245, 666
FbaI TGATCA 2 cut(s) 999, 1075
FblI GTMKAC 2 cut(s) 932, 1632
Fnu4HI GCNGC 7 cut(s) 6, 9, 408, 411, 764, 1350, 1353
FokI GGATG 8 cut(s) 264, 350, 476, 512, 941, 956, 1429, 1582
FriOI GRGCYC 1 cut(s) 1313
Fsp4HI GCNGC 7 cut(s) 6, 9, 408, 411, 764, 1350, 1353
FspBI CTAG 3 cut(s) 164, 1425, 1698
GlaI GCGC 1 cut(s) 148
GluI GCNGC 7 cut(s) 6, 9, 408, 411, 764, 1350, 1353
HaeII RGCGCY 1 cut(s) 150
HaeIII GGCC 1 cut(s) 1547
HhaI GCGC 1 cut(s) 149
Hin6I GCGC 1 cut(s) 147
HinP1I GCGC 1 cut(s) 147
HinfI GANTC 4 cut(s) 627, 870, 1258, 1553
HphI GGTGA 6 cut(s) 910, 1009, 1085, 1503, 1547, 1548
Hpy166II GTNNAC 4 cut(s) 933, 1465, 1538, 1633
Hpy188I TCNGA 6 cut(s) 181, 807, 1140, 1232, 1476, 1485
Hpy188III TCNNGA 7 cut(s) 18, 79, 614, 676, 1006, 1028, 1205
Hpy8I GTNNAC 4 cut(s) 933, 1465, 1538, 1633
Hpy99I CGWCG 1 cut(s) 46
HpyAV CCTTC 2 cut(s) 1156, 1481
HpyCH4III ACNGT 5 cut(s) 220, 595, 951, 1637, 1708
HpyCH4IV ACGT 5 cut(s) 14, 44, 1221, 1454, 1540
HpyCH4V TGCA 7 cut(s) 249, 481, 525, 638, 1166, 1266, 1508
HpyF10VI GCNNNNNNNGC 3 cut(s) 788, 1163, 1393
HpyF3I CTNAG 1 cut(s) 1215
HpySE526I ACGT 5 cut(s) 14, 44, 1221, 1454, 1540
HspAI GCGC 1 cut(s) 147
Ksp22I TGATCA 2 cut(s) 999, 1075
Kzo9I GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
LguI GCTCTTC 1 cut(s) 541
LmnI GCTCC 2 cut(s) 1412, 1747
Lsp1109I GCAGC 4 cut(s) 17, 394, 397, 1364
LweI GCATC 4 cut(s) 286, 534, 1378, 1517
MabI ACCWGGT 1 cut(s) 1069
MaeI CTAG 3 cut(s) 164, 1425, 1698
MaeII ACGT 5 cut(s) 14, 44, 1221, 1454, 1540
MaeIII GTNAC 4 cut(s) 1273, 1297, 1411, 1435
MalI GATC 7 cut(s) 25, 173, 838, 1001, 1077, 1247, 1522
MbiI CCGCTC 1 cut(s) 1750
MboI GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
MboII GAAGA 9 cut(s) 33, 145, 311, 329, 484, 558, 857, 1010, 1530
MflI RGATCY 1 cut(s) 1245
MhlI GDGCHC 2 cut(s) 1212, 1313
MmeI TCCRAC 1 cut(s) 545
Mph1103I ATGCAT 2 cut(s) 251, 1510
MroXI GAANNNNTTC 2 cut(s) 1145, 1760
MseI TTAA 6 cut(s) 128, 215, 372, 755, 915, 1740
MslI CAYNNNNRTG 5 cut(s) 282, 1010, 1304, 1578, 1584
MspA1I CMGCKG 1 cut(s) 8
MspR9I CCNGG 2 cut(s) 1071, 1381
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 2 cut(s) 1071, 1381
MwoI GCNNNNNNNGC 3 cut(s) 788, 1163, 1393
NdeI CATATG 2 cut(s) 245, 666
NdeII GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
NlaIV GGNNCC 6 cut(s) 418, 792, 985, 1247, 1408, 1716
NmuCI GTSAC 3 cut(s) 1273, 1297, 1435
NsiI ATGCAT 2 cut(s) 251, 1510
NspV TTCGAA 1 cut(s) 1021
PagI TCATGA 1 cut(s) 613
PciSI GCTCTTC 1 cut(s) 541
PctI GAATGC 1 cut(s) 1147
PdmI GAANNNNTTC 2 cut(s) 1145, 1760
PfeI GAWTC 4 cut(s) 627, 870, 1258, 1553
PflFI GACNNNGTC 1 cut(s) 1223
PkrI GCNGC 7 cut(s) 7, 10, 409, 412, 765, 1351, 1354
Psp1406I AACGTT 1 cut(s) 1540
Psp6I CCWGG 2 cut(s) 1069, 1379
PspGI CCWGG 2 cut(s) 1069, 1379
PspN4I GGNNCC 6 cut(s) 418, 792, 985, 1247, 1408, 1716
PspPI GGNCC 5 cut(s) 230, 678, 732, 984, 1545
PsrI GAACNNNNNNTAC 2 cut(s) 720, 752
PstI CTGCAG 1 cut(s) 1268
PsuI RGATCY 1 cut(s) 1245
PsyI GACNNNGTC 1 cut(s) 1223
RsaI GTAC 1 cut(s) 447
RsaNI GTAC 1 cut(s) 446
RseI CAYNNNNRTG 5 cut(s) 282, 1010, 1304, 1578, 1584
SapI GCTCTTC 1 cut(s) 541
SaqAI TTAA 6 cut(s) 128, 215, 372, 755, 915, 1740
SatI GCNGC 7 cut(s) 6, 9, 408, 411, 764, 1350, 1353
Sau3AI GATC 7 cut(s) 23, 171, 836, 999, 1075, 1245, 1520
Sau96I GGNCC 5 cut(s) 230, 678, 732, 984, 1545
ScrFI CCNGG 2 cut(s) 1071, 1381
SduI GDGCHC 2 cut(s) 1212, 1313
SexAI ACCWGGT 1 cut(s) 1069
SfaNI GCATC 4 cut(s) 286, 534, 1378, 1517
SfcI CTRYAG 2 cut(s) 992, 1264
SfuI TTCGAA 1 cut(s) 1021
SinI GGWCC 4 cut(s) 230, 678, 732, 984
SmiMI CAYNNNNRTG 5 cut(s) 282, 1010, 1304, 1578, 1584
SpeI ACTAGT 1 cut(s) 1697
SspMI CTAG 3 cut(s) 164, 1425, 1698
StyD4I CCNGG 2 cut(s) 1069, 1379
TaaI ACNGT 5 cut(s) 220, 595, 951, 1637, 1708
TaiI ACGT 5 cut(s) 17, 47, 1224, 1457, 1543
TaqI TCGA 4 cut(s) 108, 1021, 1530, 1754
TauI GCSGC 3 cut(s) 11, 766, 1352
TfiI GAWTC 4 cut(s) 627, 870, 1258, 1553
Tru1I TTAA 6 cut(s) 128, 215, 372, 755, 915, 1740
Tru9I TTAA 6 cut(s) 128, 215, 372, 755, 915, 1740
TscAI CASTG 1 cut(s) 1219
TseFI GTSAC 3 cut(s) 1273, 1297, 1435
TseI GCWGC 4 cut(s) 5, 407, 410, 1352
Tsp45I GTSAC 3 cut(s) 1273, 1297, 1435
TspGWI ACGGA 3 cut(s) 270, 724, 1399
TspRI CASTG 1 cut(s) 1219
Tth111I GACNNNGTC 1 cut(s) 1223
VpaK11BI GGWCC 4 cut(s) 230, 678, 732, 984
XapI RAATTY 5 cut(s) 808, 1023, 1181, 1525, 1663
XmiI GTMKAC 2 cut(s) 932, 1632
XmnI GAANNNNTTC 2 cut(s) 1145, 1760
XspI CTAG 3 cut(s) 164, 1425, 1698
Zsp2I ATGCAT 2 cut(s) 251, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.