Prupe.6G097900_v2.0.a1

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
6831338 .. 6837926
6589 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G097900.2

Sequence Viewer

Length: 1782 bp
ATGGCAGCCGCAACCTCAGGAAGATCATTAGAGCAAACGCCGACATGGGCTGTTGCCGTAGTCTGTTTTGTTTTGGTCTTAATTTCAATCATCATTGAGCACTTAATCGAACTCGTAGCAAAGTGGTTGAAGAAGAAACACAAAAGAGCTCTCCATGAAGCTCTAGAAAAGGTCAAATCAGAGCTCATGCTTTTGGGGTTCATATCCTTGCTCCTAACAGTAGGACAAGGCCCCATATCAAACATTTGCATATCAGAGAAACTTGGCAACACTTGGCATCCTTGTGGCAAGAAGCAAGAAACCAAAATGAACAAGGACAAGGATACAGAGCATGACGATGAAACCCCAAGTAGGAGATTACTCTCACTGTTCAATCAGTCTGATGTTGGCGTACGCCGCGTTTTGGCGGCTGCTGGCACCGACAAATGTGCAGCAAAGGGGAAAGTTCCATTTATATCCGCGGATGGTATTCATCAACTGCATATTTTTATCTTCGTGTTGGCCGTTTTCCATATCCTTTATTGCATCCTCACCATGGCTTTAGGAAGAGCCAAGATGAGAAGCTGGAAGCGGTGGGAAAAGGAAACAAGAACAGCTGAATATCAATTCTCGCATGACCCAGAGAGGTTCAGGTTTGCAAGGGACACATCTTTTGGGAGGAGGCATTTAAGCTACTGGACCCAAACACCTTTACTCATGTGGATAGTTTGTTTTTTCAGACAATTTGTTAGGTCGGTTCCTAAAGTTGATTACTTAACCCTGCGGCATGGGTTTATCATGGCACATTTAGCACCCCAAAGCCATCAGAAATTCAATTTCCAAAAATACATAAACAGATCCCTTGAAGAGGATTTCAAGGTGGTTGTGGGAATCAGCCCTCCAATTTGGTTCTTTGCTGTGATATTTCTACTCTTCAATACTCACGGATGGTATTCTTATCTTTGGCTACCCTTTATCCCATTGATTATCATTCTCTTGGTGGGGACCAAGCTACAGGTGATCATAACCAAAATGGGTATTAGAATCCAAGAAAGAGGAGAGGTGGTGAAGGGGGTTCCGGTGGTTCAACCTGGTGATGACCTCTTCTGGTTCAACCGGCCTCGCCTCATTCTCTATCTCATCAACTTTGTTCTCTTTCAGAACGCCTTCCAGCTTGCTTTCTTTGCATGGAGTTGGTATGAATTTAGTTTGAAATCTTGCTTCCATGAGCACATTGAGGACATAATCATCAGAGTTTCAATGGGGATCCTTATACAGATTCTGTGCAGTTATGTCACTCTCCCGCTCTATGCCCTTGTCACACAGATGGGTTCAACCATGAAGCCGACCATATTCAATGAAAGAGTAGCCGCTGCCCTACGCAACTGGCATCACACGGCAAGGAAGCACATAAAGCATAACAAAGGGTCCGTGACCCCAATGTCTAGTAGGCCAGCCACCCCATCCCACCACATGTCCCCTATCCACCTCCTCCGGAATTATCGAAGTGAGGTGGACAGCTTCTACAACTCACCACGAAGATCAAACTTCGAGGGTGAACGTTGGGACACGGAGTCACCCTCCCCGTCACACCGCCTCCATGTGGATGGTACTTCATCCTCCCACCATCACCAAATCGAATTGGGAAATGTAGAGCATGAGAGGGATGTTGATGTCAACGAACCAAACTCGGTTCATGCAGCTCCTACCACAACAATAACCAGTCAACTGGCTCGAACCCAACATGAAATTAGTATGGGACGGACCAAAGACTTCTCGTTTGACAATAGGCAAAGTATATAA

Protein Analysis

594

Amino Acids

68.48

Weight (kDa)

9.5

Isoelectric Point (pI)

49.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1420
AccB1I GGYRCC 1 cut(s) 416
AccBSI CCGCTC 1 cut(s) 1285
AccII CGCG 2 cut(s) 399, 461
AccIII TCCGGA 1 cut(s) 1473
AclI AACGTT 1 cut(s) 1540
AclWI GGATC 3 cut(s) 831, 1240, 1253
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 2 cut(s) 809, 1181
AfaI GTAC 2 cut(s) 393, 1591
AfiI CCNNNNNNNGG 5 cut(s) 351, 403, 535, 847, 1582
AflIII ACRYGT 1 cut(s) 1452
AhdI GACNNNNNGTC 1 cut(s) 1552
AjnI CCWGG 1 cut(s) 1069
Alw21I GWGCWC 4 cut(s) 102, 151, 186, 1212
AlwI GGATC 3 cut(s) 831, 1240, 1253
AlwNI CAGNNNCTG 1 cut(s) 1261
Aor13HI TCCGGA 1 cut(s) 1473
AoxI GGCC 4 cut(s) 229, 501, 1097, 1430
ApeKI GCWGC 5 cut(s) 5, 410, 431, 1352, 1679
ApoI RAATTY 2 cut(s) 809, 1181
ArsI GACNNNNNNTTYG 4 cut(s) 635, 667, 1742, 1774
Asp700I GAANNNNTTC 1 cut(s) 1145
AspS9I GGNCC 5 cut(s) 230, 678, 984, 1407, 1743
AsuHPI GGTGA 8 cut(s) 523, 1009, 1057, 1085, 1503, 1547, 1548, 1601
AvaII GGWCC 4 cut(s) 678, 984, 1407, 1743
AxyI CCTNAGG 1 cut(s) 16
BamHI GGATCC 1 cut(s) 1245
BanI GGYRCC 1 cut(s) 416
BanII GRGCYC 2 cut(s) 151, 186
Bbv12I GWGCWC 4 cut(s) 102, 151, 186, 1212
BbvI GCAGC 5 cut(s) 17, 397, 443, 1339, 1691
BccI CCATC 7 cut(s) 458, 810, 921, 1300, 1450, 1580, 1614
BceAI ACGGC 3 cut(s) 41, 488, 1392
BcgI CGANNNNNNTGC 2 cut(s) 410, 444
BciT130I CCWGG 1 cut(s) 1071
BciVI GTATCC 1 cut(s) 316
BclI TGATCA 1 cut(s) 999
BfaI CTAG 2 cut(s) 164, 1425
BfmI CTRYAG 1 cut(s) 992
BfuI GTATCC 1 cut(s) 316
Bme1390I CCNGG 1 cut(s) 1071
Bme18I GGWCC 4 cut(s) 678, 984, 1407, 1743
BmeRI GACNNNNNGTC 1 cut(s) 1552
BmgT120I GGNCC 5 cut(s) 230, 678, 984, 1407, 1743
BmiI GGNNCC 8 cut(s) 232, 418, 680, 738, 985, 1056, 1247, 1408
BmrFI CCNGG 1 cut(s) 1071
BmsI GCATC 3 cut(s) 286, 534, 1378
BplI GAGNNNNNCTC 2 cut(s) 1544, 1576
BsaJI CCNNGG 2 cut(s) 459, 534
BsaWI WCCGGW 2 cut(s) 1057, 1473
BsaXI ACNNNNNCTCC 4 cut(s) 1029, 1059, 1560, 1590
Bsc4I CCNNNNNNNGG 5 cut(s) 351, 403, 535, 847, 1582
Bse118I RCCGGY 1 cut(s) 1095
Bse1I ACTGG 4 cut(s) 680, 1370, 1701, 1713
Bse21I CCTNAGG 1 cut(s) 16
BseAI TCCGGA 1 cut(s) 1473
BseBI CCWGG 1 cut(s) 1071
BseDI CCNNGG 2 cut(s) 459, 534
BseGI GGATG 8 cut(s) 277, 469, 525, 932, 1442, 1591, 1595, 1651
BseLI CCNNNNNNNGG 5 cut(s) 351, 403, 535, 847, 1582
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 4 cut(s) 680, 1370, 1701, 1713
BseRI GAGGAG 3 cut(s) 673, 1050, 1460
BseXI GCAGC 5 cut(s) 17, 397, 443, 1339, 1691
BsgI GTGCAG 2 cut(s) 450, 1285
Bsh1236I CGCG 2 cut(s) 399, 461
BshFI GGCC 4 cut(s) 231, 503, 1099, 1432
BshNI GGYRCC 1 cut(s) 416
BsiHKAI GWGCWC 4 cut(s) 102, 151, 186, 1212
BsiSI CCGG 3 cut(s) 1058, 1096, 1474
BsiWI CGTACG 1 cut(s) 391
BslFI GGGAC 5 cut(s) 656, 997, 1441, 1559, 1752
BslI CCNNNNNNNGG 5 cut(s) 351, 403, 535, 847, 1582
BsmFI GGGAC 5 cut(s) 656, 997, 1441, 1559, 1752
BsnI GGCC 4 cut(s) 231, 503, 1099, 1432
Bsp1286I GDGCHC 4 cut(s) 102, 151, 186, 1212
Bsp13I TCCGGA 1 cut(s) 1473
Bsp143I GATC 5 cut(s) 23, 836, 999, 1245, 1520
Bsp19I CCATGG 1 cut(s) 534
BspANI GGCC 4 cut(s) 231, 503, 1099, 1432
BspCNI CTCAG 1 cut(s) 29
BspEI TCCGGA 1 cut(s) 1473
BspFNI CGCG 2 cut(s) 399, 461
BspLI GGNNCC 8 cut(s) 232, 418, 680, 738, 985, 1056, 1247, 1408
BspPI GGATC 3 cut(s) 831, 1240, 1253
BspQI GCTCTTC 1 cut(s) 541
BspT107I GGYRCC 1 cut(s) 416
BsrBI CCGCTC 1 cut(s) 1285
BsrFI RCCGGY 1 cut(s) 1095
BsrI ACTGG 4 cut(s) 680, 1370, 1701, 1713
BssAI RCCGGY 1 cut(s) 1095
BssECI CCNNGG 2 cut(s) 459, 534
BssMI GATC 5 cut(s) 23, 836, 999, 1245, 1520
BssT1I CCWWGG 1 cut(s) 534
Bst2UI CCWGG 1 cut(s) 1071
Bst4CI ACNGT 2 cut(s) 220, 369
Bst6I CTCTTC 4 cut(s) 541, 840, 917, 1088
BstC8I GCNNGC 3 cut(s) 415, 1155, 1434
BstDEI CTNAG 1 cut(s) 16
BstDSI CCRYGG 2 cut(s) 459, 534
BstENI CCTNNNNNAGG 1 cut(s) 845
BstF5I GGATG 8 cut(s) 277, 469, 525, 932, 1442, 1591, 1595, 1651
BstFNI CGCG 2 cut(s) 399, 461
BstKTI GATC 5 cut(s) 26, 839, 1002, 1248, 1523
BstMBI GATC 5 cut(s) 23, 836, 999, 1245, 1520
BstMWI GCNNNNNNNGC 4 cut(s) 396, 788, 1163, 1393
BstNI CCWGG 1 cut(s) 1071
BstNSI RCATGY 1 cut(s) 1456
BstSCI CCNGG 1 cut(s) 1069
BstSFI CTRYAG 1 cut(s) 992
BstUI CGCG 2 cut(s) 399, 461
BstV1I GCAGC 5 cut(s) 17, 397, 443, 1339, 1691
BstX2I RGATCY 2 cut(s) 836, 1245
BstXI CCANNNNNNTGG 2 cut(s) 1586, 1708
BstYI RGATCY 2 cut(s) 836, 1245
Bsu36I CCTNAGG 1 cut(s) 16
BsuI GTATCC 1 cut(s) 316
BsuRI GGCC 4 cut(s) 231, 503, 1099, 1432
BtgI CCRYGG 2 cut(s) 459, 534
BtsCI GGATG 8 cut(s) 277, 469, 525, 932, 1442, 1591, 1595, 1651
BtsIMutI CAGTG 1 cut(s) 365
Cac8I GCNNGC 3 cut(s) 415, 1155, 1434
CaiI CAGNNNCTG 1 cut(s) 1261
Cfr10I RCCGGY 1 cut(s) 1095
Cfr13I GGNCC 5 cut(s) 230, 678, 984, 1407, 1743
Cfr42I CCGCGG 1 cut(s) 462
CsiI ACCWGGT 1 cut(s) 1069
Csp6I GTAC 2 cut(s) 392, 1590
CviQI GTAC 2 cut(s) 392, 1590
DdeI CTNAG 1 cut(s) 16
DpnI GATC 5 cut(s) 25, 838, 1001, 1247, 1522
DpnII GATC 5 cut(s) 23, 836, 999, 1245, 1520
DrdI GACNNNNNNGTC 1 cut(s) 1420
DriI GACNNNNNGTC 1 cut(s) 1552
DseDI GACNNNNNNGTC 1 cut(s) 1420
EaeI YGGCCR 1 cut(s) 501
Eam1104I CTCTTC 4 cut(s) 541, 840, 917, 1088
Eam1105I GACNNNNNGTC 1 cut(s) 1552
EarI CTCTTC 4 cut(s) 541, 840, 917, 1088
Ecl136II GAGCTC 2 cut(s) 149, 184
Eco130I CCWWGG 1 cut(s) 534
Eco24I GRGCYC 2 cut(s) 151, 186
Eco47I GGWCC 4 cut(s) 678, 984, 1407, 1743
Eco53kI GAGCTC 2 cut(s) 149, 184
Eco81I CCTNAGG 1 cut(s) 16
EcoICRI GAGCTC 2 cut(s) 149, 184
EcoNI CCTNNNNNAGG 1 cut(s) 845
EcoO109I RGGNCCY 1 cut(s) 230
EcoRII CCWGG 1 cut(s) 1069
EcoT14I CCWWGG 1 cut(s) 534
EcoT38I GRGCYC 2 cut(s) 151, 186
ErhI CCWWGG 1 cut(s) 534
FaqI GGGAC 5 cut(s) 656, 997, 1441, 1559, 1752
FauI CCCGC 1 cut(s) 1290
FbaI TGATCA 1 cut(s) 999
FokI GGATG 8 cut(s) 264, 476, 512, 939, 1429, 1582, 1598, 1658
FriOI GRGCYC 2 cut(s) 151, 186
FspBI CTAG 2 cut(s) 164, 1425
HaeIII GGCC 4 cut(s) 231, 503, 1099, 1432
HapII CCGG 3 cut(s) 1058, 1096, 1474
HincII GTYRAC 2 cut(s) 1657, 1706
HindII GTYRAC 2 cut(s) 1657, 1706
HinfI GANTC 4 cut(s) 870, 1023, 1258, 1553
HpaII CCGG 3 cut(s) 1058, 1096, 1474
HphI GGTGA 8 cut(s) 523, 1009, 1057, 1085, 1503, 1547, 1548, 1601
Hpy166II GTNNAC 4 cut(s) 1495, 1538, 1657, 1706
Hpy188I TCNGA 7 cut(s) 181, 256, 382, 719, 807, 1140, 1232
Hpy188III TCNNGA 3 cut(s) 18, 164, 1474
Hpy8I GTNNAC 4 cut(s) 1495, 1538, 1657, 1706
HpyAV CCTTC 2 cut(s) 1042, 1156
HpyCH4III ACNGT 2 cut(s) 220, 369
HpyCH4IV ACGT 1 cut(s) 1540
HpyCH4V TGCA 8 cut(s) 249, 431, 481, 525, 638, 1166, 1266, 1679
HpyF10VI GCNNNNNNNGC 4 cut(s) 396, 788, 1163, 1393
HpyF3I CTNAG 1 cut(s) 16
HpySE526I ACGT 1 cut(s) 1540
Kpn2I TCCGGA 1 cut(s) 1473
Ksp22I TGATCA 1 cut(s) 999
KspI CCGCGG 1 cut(s) 462
Kzo9I GATC 5 cut(s) 23, 836, 999, 1245, 1520
LguI GCTCTTC 1 cut(s) 541
LmnI GCTCC 2 cut(s) 216, 1687
Lsp1109I GCAGC 5 cut(s) 17, 397, 443, 1339, 1691
LweI GCATC 3 cut(s) 286, 534, 1378
MabI ACCWGGT 1 cut(s) 1069
MaeI CTAG 2 cut(s) 164, 1425
MaeII ACGT 1 cut(s) 1540
MaeIII GTNAC 5 cut(s) 1273, 1297, 1411, 1554, 1566
MalI GATC 5 cut(s) 25, 838, 1001, 1247, 1522
MbiI CCGCTC 1 cut(s) 1285
MboI GATC 5 cut(s) 23, 836, 999, 1245, 1520
MboII GAAGA 9 cut(s) 33, 142, 145, 484, 558, 857, 904, 1075, 1530
MflI RGATCY 2 cut(s) 836, 1245
MhlI GDGCHC 4 cut(s) 102, 151, 186, 1212
MlyI GAGTC 1 cut(s) 1562
MroI TCCGGA 1 cut(s) 1473
MroXI GAANNNNTTC 1 cut(s) 1145
MseI TTAA 4 cut(s) 80, 104, 668, 755
MslI CAYNNNNRTG 4 cut(s) 282, 336, 1304, 1584
MspA1I CMGCKG 3 cut(s) 461, 596, 1352
MspI CCGG 3 cut(s) 1058, 1096, 1474
MspR9I CCNGG 1 cut(s) 1071
MvaI CCWGG 1 cut(s) 1071
MvnI CGCG 2 cut(s) 399, 461
MwoI GCNNNNNNNGC 4 cut(s) 396, 788, 1163, 1393
NcoI CCATGG 1 cut(s) 534
NdeII GATC 5 cut(s) 23, 836, 999, 1245, 1520
NlaIV GGNNCC 8 cut(s) 232, 418, 680, 738, 985, 1056, 1247, 1408
NmuCI GTSAC 5 cut(s) 1273, 1297, 1411, 1554, 1566
NspI RCATGY 1 cut(s) 1456
PciI ACATGT 1 cut(s) 1452
PciSI GCTCTTC 1 cut(s) 541
PcsI WCGNNNNNNNCGW 1 cut(s) 501
PdmI GAANNNNTTC 1 cut(s) 1145
PfeI GAWTC 3 cut(s) 870, 1023, 1258
Pfl23II CGTACG 1 cut(s) 391
PleI GAGTC 1 cut(s) 1561
PpsI GAGTC 1 cut(s) 1561
PscI ACATGT 1 cut(s) 1452
Psp124BI GAGCTC 2 cut(s) 151, 186
Psp1406I AACGTT 1 cut(s) 1540
Psp6I CCWGG 1 cut(s) 1069
PspGI CCWGG 1 cut(s) 1069
PspLI CGTACG 1 cut(s) 391
PspN4I GGNNCC 8 cut(s) 232, 418, 680, 738, 985, 1056, 1247, 1408
PspPI GGNCC 5 cut(s) 230, 678, 984, 1407, 1743
PstNI CAGNNNCTG 1 cut(s) 1261
PsuI RGATCY 2 cut(s) 836, 1245
PvuII CAGCTG 1 cut(s) 596
RsaI GTAC 2 cut(s) 393, 1591
RsaNI GTAC 2 cut(s) 392, 1590
RseI CAYNNNNRTG 4 cut(s) 282, 336, 1304, 1584
SacI GAGCTC 2 cut(s) 151, 186
SacII CCGCGG 1 cut(s) 462
SapI GCTCTTC 1 cut(s) 541
SaqAI TTAA 4 cut(s) 80, 104, 668, 755
Sau3AI GATC 5 cut(s) 23, 836, 999, 1245, 1520
Sau96I GGNCC 5 cut(s) 230, 678, 984, 1407, 1743
SchI GAGTC 1 cut(s) 1562
ScrFI CCNGG 1 cut(s) 1071
SduI GDGCHC 4 cut(s) 102, 151, 186, 1212
SexAI ACCWGGT 1 cut(s) 1069
SfaNI GCATC 3 cut(s) 286, 534, 1378
SfcI CTRYAG 1 cut(s) 992
Sfr303I CCGCGG 1 cut(s) 462
SgrBI CCGCGG 1 cut(s) 462
SinI GGWCC 4 cut(s) 678, 984, 1407, 1743
SmiMI CAYNNNNRTG 4 cut(s) 282, 336, 1304, 1584
SspMI CTAG 2 cut(s) 164, 1425
SstI GAGCTC 2 cut(s) 151, 186
StyD4I CCNGG 1 cut(s) 1069
StyI CCWWGG 1 cut(s) 534
TaaI ACNGT 2 cut(s) 220, 369
TaiI ACGT 1 cut(s) 1543
TaqI TCGA 5 cut(s) 108, 1483, 1530, 1617, 1714
TauI GCSGC 5 cut(s) 11, 399, 410, 766, 1352
TfiI GAWTC 3 cut(s) 870, 1023, 1258
Tru1I TTAA 4 cut(s) 80, 104, 668, 755
Tru9I TTAA 4 cut(s) 80, 104, 668, 755
TscAI CASTG 1 cut(s) 372
TseFI GTSAC 5 cut(s) 1273, 1297, 1411, 1554, 1566
TseI GCWGC 5 cut(s) 5, 410, 431, 1352, 1679
Tsp45I GTSAC 5 cut(s) 1273, 1297, 1411, 1554, 1566
TspGWI ACGGA 4 cut(s) 939, 1399, 1565, 1756
TspRI CASTG 1 cut(s) 372
VpaK11BI GGWCC 4 cut(s) 678, 984, 1407, 1743
XagI CCTNNNNNAGG 1 cut(s) 845
XapI RAATTY 2 cut(s) 809, 1181
XbaI TCTAGA 1 cut(s) 163
XceI RCATGY 1 cut(s) 1456
XmnI GAANNNNTTC 1 cut(s) 1145
XspI CTAG 2 cut(s) 164, 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.