UPF0392 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 45, 1101 |
| Acc36I | ACCTGC | 1 cut(s) | 2709 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1678, 1940 |
| AccI | GTMKAC | 1 cut(s) | 1101 |
| AccII | CGCG | 9 cut(s) | 629, 820, 872, 1055, 1319, 1460, 1754, 2174, 2686 |
| AclI | AACGTT | 1 cut(s) | 1332 |
| AclWI | GGATC | 5 cut(s) | 812, 1051, 1732, 1741, 2583 |
| AcoI | YGGCCR | 3 cut(s) | 572, 1013, 1301 |
| AcsI | RAATTY | 2 cut(s) | 383, 1182 |
| AcuI | CTGAAG | 1 cut(s) | 2541 |
| AcvI | CACGTG | 1 cut(s) | 422 |
| AcyI | GRCGYC | 5 cut(s) | 42, 416, 516, 1098, 2714 |
| AfaI | GTAC | 7 cut(s) | 402, 614, 684, 1466, 2206, 2317, 2560 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 724, 1238, 1523, 1678, 1940 |
| AflIII | ACRYGT | 1 cut(s) | 591 |
| AgeI | ACCGGT | 1 cut(s) | 492 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2418 |
| AjiI | CACGTC | 3 cut(s) | 592, 986, 1248 |
| AjnI | CCWGG | 1 cut(s) | 574 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 897, 929 |
| Alw21I | GWGCWC | 1 cut(s) | 1516 |
| Alw26I | GTCTC | 8 cut(s) | 33, 294, 372, 407, 751, 1276, 1897, 2405 |
| AlwI | GGATC | 5 cut(s) | 812, 1051, 1732, 1741, 2583 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2229 |
| Ama87I | CYCGRG | 1 cut(s) | 1795 |
| AoxI | GGCC | 8 cut(s) | 572, 715, 726, 734, 1013, 1208, 1229, 1301 |
| ApeKI | GCWGC | 4 cut(s) | 866, 1630, 2384, 2591 |
| ApoI | RAATTY | 2 cut(s) | 383, 1182 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1479, 1511 |
| AsiGI | ACCGGT | 1 cut(s) | 492 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1888 |
| AspLEI | GCGC | 3 cut(s) | 1055, 2174, 2642 |
| AspS9I | GGNCC | 5 cut(s) | 482, 716, 727, 734, 1208 |
| AsuC2I | CCSGG | 2 cut(s) | 476, 1518 |
| AsuHPI | GGTGA | 9 cut(s) | 256, 482, 901, 1139, 1190, 1331, 1340, 1693, 1781 |
| AsuII | TTCGAA | 1 cut(s) | 1186 |
| AsuNHI | GCTAGC | 1 cut(s) | 1853 |
| AvaI | CYCGRG | 1 cut(s) | 1795 |
| AvaII | GGWCC | 1 cut(s) | 482 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2299, 2331 |
| BbrPI | CACGTG | 1 cut(s) | 422 |
| BbsI | GAAGAC | 3 cut(s) | 82, 207, 1665 |
| Bbv12I | GWGCWC | 1 cut(s) | 1516 |
| BbvI | GCAGC | 4 cut(s) | 878, 1642, 2371, 2603 |
| BccI | CCATC | 7 cut(s) | 447, 1129, 1219, 1352, 1552, 1715, 2059 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1067, 1101, 1176, 1210 |
| BciT130I | CCWGG | 1 cut(s) | 576 |
| BciVI | GTATCC | 2 cut(s) | 369, 1247 |
| BclI | TGATCA | 1 cut(s) | 466 |
| BcnI | CCSGG | 2 cut(s) | 476, 1518 |
| BcoDI | GTCTC | 8 cut(s) | 33, 294, 372, 407, 751, 1276, 1897, 2405 |
| BfaI | CTAG | 4 cut(s) | 1002, 1854, 2202, 2424 |
| BfmI | CTRYAG | 1 cut(s) | 2037 |
| BfuAI | ACCTGC | 1 cut(s) | 2709 |
| BfuI | GTATCC | 2 cut(s) | 369, 1247 |
| BglII | AGATCT | 2 cut(s) | 1223, 1840 |
| BlpI | GCTNAGC | 1 cut(s) | 792 |
| BmcAI | AGTACT | 1 cut(s) | 2206 |
| Bme1390I | CCNGG | 3 cut(s) | 476, 576, 1518 |
| Bme18I | GGWCC | 1 cut(s) | 482 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2418 |
| BmeT110I | CYCGRG | 1 cut(s) | 1795 |
| BmgBI | CACGTC | 3 cut(s) | 592, 986, 1248 |
| BmgT120I | GGNCC | 5 cut(s) | 482, 716, 727, 734, 1208 |
| BmiI | GGNNCC | 2 cut(s) | 769, 1528 |
| BmrFI | CCNGG | 3 cut(s) | 476, 576, 1518 |
| BmsI | GCATC | 3 cut(s) | 2578, 2592, 2636 |
| BmtI | GCTAGC | 1 cut(s) | 1857 |
| BpiI | GAAGAC | 3 cut(s) | 82, 207, 1665 |
| BpmI | CTGGAG | 1 cut(s) | 1737 |
| Bpu10I | CCTNAGC | 1 cut(s) | 672 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 792 |
| Bpu14I | TTCGAA | 1 cut(s) | 1186 |
| BpuEI | CTTGAG | 1 cut(s) | 2204 |
| BpuMI | CCSGG | 2 cut(s) | 476, 1518 |
| Bsa29I | ATCGAT | 2 cut(s) | 1711, 1748 |
| BsaAI | YACGTR | 2 cut(s) | 422, 1468 |
| BsaBI | GATNNNNATC | 3 cut(s) | 468, 1787, 1804 |
| BsaHI | GRCGYC | 5 cut(s) | 42, 416, 516, 1098, 2714 |
| BsaJI | CCNNGG | 4 cut(s) | 730, 870, 1016, 1232 |
| BsaWI | WCCGGW | 6 cut(s) | 142, 332, 492, 770, 1124, 1276 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 30, 60, 2542, 2572 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 724, 1238, 1523, 1678, 1940 |
| Bse118I | RCCGGY | 2 cut(s) | 492, 796 |
| Bse8I | GATNNNNATC | 3 cut(s) | 468, 1787, 1804 |
| BseBI | CCWGG | 1 cut(s) | 576 |
| BseCI | ATCGAT | 2 cut(s) | 1711, 1748 |
| BseDI | CCNNGG | 4 cut(s) | 730, 870, 1016, 1232 |
| BseGI | GGATG | 3 cut(s) | 1116, 1121, 2593 |
| BseJI | GATNNNNATC | 3 cut(s) | 468, 1787, 1804 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 724, 1238, 1523, 1678, 1940 |
| BseMII | CTCAG | 7 cut(s) | 299, 402, 686, 806, 1043, 1366, 1548 |
| BseRI | GAGGAG | 2 cut(s) | 2551, 2566 |
| BseX3I | CGGCCG | 1 cut(s) | 1301 |
| BseXI | GCAGC | 4 cut(s) | 878, 1642, 2371, 2603 |
| Bsh1236I | CGCG | 9 cut(s) | 629, 820, 872, 1055, 1319, 1460, 1754, 2174, 2686 |
| Bsh1285I | CGRYCG | 3 cut(s) | 462, 1304, 1752 |
| BshFI | GGCC | 8 cut(s) | 574, 717, 728, 736, 1015, 1210, 1231, 1303 |
| BshTI | ACCGGT | 1 cut(s) | 492 |
| BshVI | ATCGAT | 2 cut(s) | 1711, 1748 |
| BsiEI | CGRYCG | 3 cut(s) | 462, 1304, 1752 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1516 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1795 |
| BsiWI | CGTACG | 3 cut(s) | 400, 682, 1464 |
| BslFI | GGGAC | 1 cut(s) | 1844 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 724, 1238, 1523, 1678, 1940 |
| BsmAI | GTCTC | 8 cut(s) | 33, 294, 372, 407, 751, 1276, 1897, 2405 |
| BsmBI | CGTCTC | 3 cut(s) | 33, 407, 1897 |
| BsmFI | GGGAC | 1 cut(s) | 1844 |
| BsmI | GAATGC | 1 cut(s) | 780 |
| BsnI | GGCC | 8 cut(s) | 574, 717, 728, 736, 1015, 1210, 1231, 1303 |
| BsoBI | CYCGRG | 1 cut(s) | 1795 |
| Bsp119I | TTCGAA | 1 cut(s) | 1186 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1516 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 792 |
| Bsp68I | TCGCGA | 4 cut(s) | 629, 1460, 1754, 2686 |
| BspANI | GGCC | 8 cut(s) | 574, 717, 728, 736, 1015, 1210, 1231, 1303 |
| BspCNI | CTCAG | 7 cut(s) | 298, 403, 685, 805, 1042, 1365, 1549 |
| BspDI | ATCGAT | 2 cut(s) | 1711, 1748 |
| BspFNI | CGCG | 9 cut(s) | 629, 820, 872, 1055, 1319, 1460, 1754, 2174, 2686 |
| BspLI | GGNNCC | 2 cut(s) | 769, 1528 |
| BspMAI | CTGCAG | 1 cut(s) | 2041 |
| BspMI | ACCTGC | 1 cut(s) | 2709 |
| BspOI | GCTAGC | 1 cut(s) | 1857 |
| BspPI | GGATC | 5 cut(s) | 812, 1051, 1732, 1741, 2583 |
| BspT104I | TTCGAA | 1 cut(s) | 1186 |
| BsrFI | RCCGGY | 2 cut(s) | 492, 796 |
| BssAI | RCCGGY | 2 cut(s) | 492, 796 |
| BssECI | CCNNGG | 4 cut(s) | 730, 870, 1016, 1232 |
| BssNI | GRCGYC | 5 cut(s) | 42, 416, 516, 1098, 2714 |
| Bst2UI | CCWGG | 1 cut(s) | 576 |
| Bst4CI | ACNGT | 9 cut(s) | 405, 544, 617, 687, 699, 921, 1202, 2320, 2329 |
| Bst6I | CTCTTC | 7 cut(s) | 110, 574, 1482, 2051, 2079, 2105, 2517 |
| BstACI | GRCGYC | 5 cut(s) | 42, 416, 516, 1098, 2714 |
| BstBAI | YACGTR | 2 cut(s) | 422, 1468 |
| BstBI | TTCGAA | 1 cut(s) | 1186 |
| BstC8I | GCNNGC | 6 cut(s) | 441, 1855, 2288, 2688, 2706, 2732 |
| BstDEI | CTNAG | 9 cut(s) | 285, 411, 672, 792, 1029, 1352, 1557, 1589, 2444 |
| BstDSI | CCRYGG | 3 cut(s) | 730, 870, 1016 |
| BstF5I | GGATG | 3 cut(s) | 1116, 1121, 2593 |
| BstFNI | CGCG | 9 cut(s) | 629, 820, 872, 1055, 1319, 1460, 1754, 2174, 2686 |
| BstHHI | GCGC | 3 cut(s) | 1055, 2174, 2642 |
| BstMAI | GTCTC | 8 cut(s) | 33, 294, 372, 407, 751, 1276, 1897, 2405 |
| BstMCI | CGRYCG | 3 cut(s) | 462, 1304, 1752 |
| BstNI | CCWGG | 1 cut(s) | 576 |
| BstSCI | CCNGG | 3 cut(s) | 474, 574, 1516 |
| BstSFI | CTRYAG | 1 cut(s) | 2037 |
| BstSNI | TACGTA | 1 cut(s) | 1468 |
| BstUI | CGCG | 9 cut(s) | 629, 820, 872, 1055, 1319, 1460, 1754, 2174, 2686 |
| BstV1I | GCAGC | 4 cut(s) | 878, 1642, 2371, 2603 |
| BstV2I | GAAGAC | 3 cut(s) | 82, 207, 1665 |
| BstX2I | RGATCY | 2 cut(s) | 1223, 1840 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1551 |
| BstYI | RGATCY | 2 cut(s) | 1223, 1840 |
| BstZI | CGGCCG | 1 cut(s) | 1301 |
| Bsu15I | ATCGAT | 2 cut(s) | 1711, 1748 |
| BsuI | GTATCC | 2 cut(s) | 369, 1247 |
| BsuRI | GGCC | 8 cut(s) | 574, 717, 728, 736, 1015, 1210, 1231, 1303 |
| BsuTUI | ATCGAT | 2 cut(s) | 1711, 1748 |
| BtgI | CCRYGG | 3 cut(s) | 730, 870, 1016 |
| BtgZI | GCGATG | 3 cut(s) | 943, 1325, 2615 |
| BtrI | CACGTC | 3 cut(s) | 592, 986, 1248 |
| BtsCI | GGATG | 3 cut(s) | 1116, 1121, 2593 |
| BtsI | GCAGTG | 1 cut(s) | 663 |
| BtsIMutI | CAGTG | 1 cut(s) | 663 |
| BtuMI | TCGCGA | 4 cut(s) | 629, 1460, 1754, 2686 |
| BveI | ACCTGC | 1 cut(s) | 2709 |
| Cac8I | GCNNGC | 6 cut(s) | 441, 1855, 2288, 2688, 2706, 2732 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2229 |
| CfoI | GCGC | 3 cut(s) | 1055, 2174, 2642 |
| Cfr10I | RCCGGY | 2 cut(s) | 492, 796 |
| Cfr13I | GGNCC | 5 cut(s) | 482, 716, 727, 734, 1208 |
| Cfr42I | CCGCGG | 1 cut(s) | 873 |
| ClaI | ATCGAT | 2 cut(s) | 1711, 1748 |
| CseI | GACGC | 4 cut(s) | 424, 524, 1330, 2703 |
| Csp6I | GTAC | 7 cut(s) | 401, 613, 683, 1465, 2205, 2316, 2559 |
| CspAI | ACCGGT | 1 cut(s) | 492 |
| CviAII | CATG | 6 cut(s) | 54, 115, 853, 1378, 2021, 2126 |
| CviQI | GTAC | 7 cut(s) | 401, 613, 683, 1465, 2205, 2316, 2559 |
| DdeI | CTNAG | 9 cut(s) | 285, 411, 672, 792, 1029, 1352, 1557, 1589, 2444 |
| DraI | TTTAAA | 1 cut(s) | 1924 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2418 |
| EaeI | YGGCCR | 3 cut(s) | 572, 1013, 1301 |
| EagI | CGGCCG | 1 cut(s) | 1301 |
| Eam1104I | CTCTTC | 7 cut(s) | 110, 574, 1482, 2051, 2079, 2105, 2517 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2418 |
| EarI | CTCTTC | 7 cut(s) | 110, 574, 1482, 2051, 2079, 2105, 2517 |
| EciI | GGCGGA | 3 cut(s) | 51, 73, 2270 |
| EclXI | CGGCCG | 1 cut(s) | 1301 |
| Eco105I | TACGTA | 1 cut(s) | 1468 |
| Eco32I | GATATC | 1 cut(s) | 955 |
| Eco47I | GGWCC | 1 cut(s) | 482 |
| Eco52I | CGGCCG | 1 cut(s) | 1301 |
| Eco57I | CTGAAG | 1 cut(s) | 2541 |
| Eco72I | CACGTG | 1 cut(s) | 422 |
| Eco88I | CYCGRG | 1 cut(s) | 1795 |
| EcoRII | CCWGG | 1 cut(s) | 574 |
| EcoRV | GATATC | 1 cut(s) | 955 |
| Esp3I | CGTCTC | 3 cut(s) | 33, 407, 1897 |
| FaeI | CATG | 6 cut(s) | 57, 118, 856, 1381, 2024, 2129 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 815, 847, 1873, 1905 |
| FaqI | GGGAC | 1 cut(s) | 1844 |
| FatI | CATG | 6 cut(s) | 53, 114, 852, 1377, 2020, 2125 |
| FauI | CCCGC | 2 cut(s) | 822, 1816 |
| FbaI | TGATCA | 1 cut(s) | 466 |
| FblI | GTMKAC | 1 cut(s) | 1101 |
| FokI | GGATG | 3 cut(s) | 1103, 1108, 2600 |
| FspBI | CTAG | 4 cut(s) | 1002, 1854, 2202, 2424 |
| GlaI | GCGC | 3 cut(s) | 1054, 2173, 2641 |
| GsuI | CTGGAG | 1 cut(s) | 1737 |
| HaeIII | GGCC | 8 cut(s) | 574, 717, 728, 736, 1015, 1210, 1231, 1303 |
| HgaI | GACGC | 4 cut(s) | 424, 524, 1330, 2703 |
| HhaI | GCGC | 3 cut(s) | 1055, 2174, 2642 |
| Hin1I | GRCGYC | 5 cut(s) | 42, 416, 516, 1098, 2714 |
| Hin1II | CATG | 6 cut(s) | 57, 118, 856, 1381, 2024, 2129 |
| Hin6I | GCGC | 3 cut(s) | 1053, 2172, 2640 |
| HinP1I | GCGC | 3 cut(s) | 1053, 2172, 2640 |
| HincII | GTYRAC | 1 cut(s) | 1102 |
| HindII | GTYRAC | 1 cut(s) | 1102 |
| HindIII | AAGCTT | 2 cut(s) | 163, 2150 |
| HphI | GGTGA | 9 cut(s) | 256, 482, 901, 1139, 1190, 1331, 1340, 1693, 1781 |
| Hpy166II | GTNNAC | 6 cut(s) | 373, 511, 613, 1102, 1339, 2219 |
| Hpy8I | GTNNAC | 6 cut(s) | 373, 511, 613, 1102, 1339, 2219 |
| HpyAV | CCTTC | 7 cut(s) | 106, 792, 1893, 1947, 1947, 2262, 2541 |
| HpyCH4III | ACNGT | 9 cut(s) | 405, 544, 617, 687, 699, 921, 1202, 2320, 2329 |
| HpyCH4V | TGCA | 9 cut(s) | 849, 1064, 2039, 2142, 2232, 2286, 2468, 2591, 2704 |
| HpyF3I | CTNAG | 9 cut(s) | 285, 411, 672, 792, 1029, 1352, 1557, 1589, 2444 |
| Hsp92I | GRCGYC | 5 cut(s) | 42, 416, 516, 1098, 2714 |
| Hsp92II | CATG | 6 cut(s) | 57, 118, 856, 1381, 2024, 2129 |
| HspAI | GCGC | 3 cut(s) | 1053, 2172, 2640 |
| Ksp22I | TGATCA | 1 cut(s) | 466 |
| KspI | CCGCGG | 1 cut(s) | 873 |
| LmnI | GCTCC | 1 cut(s) | 2538 |
| Lsp1109I | GCAGC | 4 cut(s) | 878, 1642, 2371, 2603 |
| LweI | GCATC | 3 cut(s) | 2578, 2592, 2636 |
| MaeI | CTAG | 4 cut(s) | 1002, 1854, 2202, 2424 |
| MaeIII | GTNAC | 9 cut(s) | 178, 226, 989, 1243, 1272, 1702, 1986, 2484, 2607 |
| MflI | RGATCY | 2 cut(s) | 1223, 1840 |
| MhlI | GDGCHC | 1 cut(s) | 1516 |
| MluCI | AATT | 8 cut(s) | 248, 383, 906, 1048, 1153, 1182, 1912, 2162 |
| MlyI | GAGTC | 5 cut(s) | 212, 1163, 1251, 1464, 2428 |
| MmeI | TCCRAC | 2 cut(s) | 386, 2553 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1888 |
| MseI | TTAA | 9 cut(s) | 126, 564, 644, 741, 810, 1023, 1575, 1923, 1968 |
| MslI | CAYNNNNRTG | 1 cut(s) | 495 |
| MspA1I | CMGCKG | 2 cut(s) | 872, 1811 |
| MspR9I | CCNGG | 3 cut(s) | 476, 576, 1518 |
| Mva1269I | GAATGC | 1 cut(s) | 780 |
| MvaI | CCWGG | 1 cut(s) | 576 |
| MvnI | CGCG | 9 cut(s) | 629, 820, 872, 1055, 1319, 1460, 1754, 2174, 2686 |
| NciI | CCSGG | 2 cut(s) | 476, 1518 |
| NheI | GCTAGC | 1 cut(s) | 1853 |
| NlaIII | CATG | 6 cut(s) | 57, 118, 856, 1381, 2024, 2129 |
| NlaIV | GGNNCC | 2 cut(s) | 769, 1528 |
| NmeAIII | GCCGAG | 2 cut(s) | 988, 1207 |
| NmuCI | GTSAC | 1 cut(s) | 1243 |
| NruI | TCGCGA | 4 cut(s) | 629, 1460, 1754, 2686 |
| NspV | TTCGAA | 1 cut(s) | 1186 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 455, 522, 966, 975, 1101, 1464 |
| PctI | GAATGC | 1 cut(s) | 780 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1888 |
| Pfl23II | CGTACG | 3 cut(s) | 400, 682, 1464 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1678, 1940 |
| PinAI | ACCGGT | 1 cut(s) | 492 |
| Ple19I | CGATCG | 1 cut(s) | 1752 |
| PleI | GAGTC | 5 cut(s) | 211, 1163, 1250, 1463, 2427 |
| PmaCI | CACGTG | 1 cut(s) | 422 |
| PmlI | CACGTG | 1 cut(s) | 422 |
| PpsI | GAGTC | 5 cut(s) | 211, 1163, 1250, 1463, 2427 |
| Ppu21I | YACGTR | 2 cut(s) | 422, 1468 |
| Psp1406I | AACGTT | 1 cut(s) | 1332 |
| Psp6I | CCWGG | 1 cut(s) | 574 |
| PspCI | CACGTG | 1 cut(s) | 422 |
| PspGI | CCWGG | 1 cut(s) | 574 |
| PspLI | CGTACG | 3 cut(s) | 400, 682, 1464 |
| PspN4I | GGNNCC | 2 cut(s) | 769, 1528 |
| PspPI | GGNCC | 5 cut(s) | 482, 716, 727, 734, 1208 |
| PstI | CTGCAG | 1 cut(s) | 2041 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2229 |
| PsuI | RGATCY | 2 cut(s) | 1223, 1840 |
| PvuI | CGATCG | 1 cut(s) | 1752 |
| RruI | TCGCGA | 4 cut(s) | 629, 1460, 1754, 2686 |
| RsaI | GTAC | 7 cut(s) | 402, 614, 684, 1466, 2206, 2317, 2560 |
| RsaNI | GTAC | 7 cut(s) | 401, 613, 683, 1465, 2205, 2316, 2559 |
| RseI | CAYNNNNRTG | 1 cut(s) | 495 |
| SacII | CCGCGG | 1 cut(s) | 873 |
| SalI | GTCGAC | 1 cut(s) | 1100 |
| SaqAI | TTAA | 9 cut(s) | 126, 564, 644, 741, 810, 1023, 1575, 1923, 1968 |
| Sau96I | GGNCC | 5 cut(s) | 482, 716, 727, 734, 1208 |
| ScaI | AGTACT | 1 cut(s) | 2206 |
| SchI | GAGTC | 5 cut(s) | 212, 1163, 1251, 1464, 2428 |
| ScrFI | CCNGG | 3 cut(s) | 476, 576, 1518 |
| SduI | GDGCHC | 1 cut(s) | 1516 |
| SfaNI | GCATC | 3 cut(s) | 2578, 2592, 2636 |
| SfcI | CTRYAG | 1 cut(s) | 2037 |
| Sfr303I | CCGCGG | 1 cut(s) | 873 |
| SfuI | TTCGAA | 1 cut(s) | 1186 |
| SgrBI | CCGCGG | 1 cut(s) | 873 |
| SgrDI | CGTCGACG | 1 cut(s) | 1100 |
| SinI | GGWCC | 1 cut(s) | 482 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 495 |
| SmlI | CTYRAG | 1 cut(s) | 2183 |
| SmoI | CTYRAG | 1 cut(s) | 2183 |
| SnaBI | TACGTA | 1 cut(s) | 1468 |
| Sse9I | AATT | 8 cut(s) | 248, 383, 906, 1048, 1153, 1182, 1912, 2162 |
| SspMI | CTAG | 4 cut(s) | 1002, 1854, 2202, 2424 |
| StyD4I | CCNGG | 3 cut(s) | 474, 574, 1516 |
| TaaI | ACNGT | 9 cut(s) | 405, 544, 617, 687, 699, 921, 1202, 2320, 2329 |
| TaqII | GACCGA | 1 cut(s) | 476 |
| TasI | AATT | 8 cut(s) | 248, 383, 906, 1048, 1153, 1182, 1912, 2162 |
| TatI | WGTACW | 3 cut(s) | 2204, 2315, 2558 |
| TauI | GCSGC | 8 cut(s) | 36, 671, 728, 820, 872, 1814, 1817, 2255 |
| Tru1I | TTAA | 9 cut(s) | 126, 564, 644, 741, 810, 1023, 1575, 1923, 1968 |
| Tru9I | TTAA | 9 cut(s) | 126, 564, 644, 741, 810, 1023, 1575, 1923, 1968 |
| TscAI | CASTG | 1 cut(s) | 670 |
| TseFI | GTSAC | 1 cut(s) | 1243 |
| TseI | GCWGC | 4 cut(s) | 866, 1630, 2384, 2591 |
| Tsp45I | GTSAC | 1 cut(s) | 1243 |
| TspDTI | ATGAA | 8 cut(s) | 17, 42, 916, 1328, 1777, 2037, 2175, 2655 |
| TspGWI | ACGGA | 5 cut(s) | 188, 364, 1049, 1132, 1974 |
| TspRI | CASTG | 1 cut(s) | 670 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1678, 1940 |
| VpaK11BI | GGWCC | 1 cut(s) | 482 |
| XapI | RAATTY | 2 cut(s) | 383, 1182 |
| XbaI | TCTAGA | 1 cut(s) | 1001 |
| XmiI | GTMKAC | 1 cut(s) | 1101 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1888 |
| XspI | CTAG | 4 cut(s) | 1002, 1854, 2202, 2424 |
| ZraI | GACGTC | 2 cut(s) | 43, 1099 |
| ZrmI | AGTACT | 1 cut(s) | 2206 |