Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001421

Physical Location & Seq

Genomic Coordinates Reverse (-)

1751112 .. 1756111

Gene Structure 5000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00078460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGAAAGGACCGAAACCACGTAACAACAATAGGAAGAGACCACCACGCAACGACACCAATTCCTGGAGCAGGATCTTCTGGTGCACCATCTTCATCTTCTTCAACTTCCTCCTCCTCTCCGGCTTCACCTTCTCCACTTTCCGGCTCCTCTTCGGAAAAACATTTCGACCAGGACTATTGCTAAGATGGCCAACTGTAACAAAAACCGCCGTAACCGCCAACTCTCCGGTCACCATTTCAGTCCGAGACGTAGTTACGCTGCCGGACCAGTCACTGGTTTTCCTAAACTACCCTCGAACCGGTCGCTTATTTACAAAGGAGGAAATCGACTGCATTTACTTCTCAGCTAATGACCTCTCCGCCCGGCCTCTCTTCAAGCAACCGCCGCTCGACATGGACGGCGAGGATCCCTACAACCAGATAGTACGGTGCCCGCTGCAGTCCGGAGACGGCTTTAGGGTTTCAGTTGGTTTGAAAAAGCAAAACGGCGACGTAACGTCGGTGCCGACGTACACGTGGGACTCACTGGCGTATGATGCGGTCATTGACCACGACAACACCACCGTCGTTTTCGTGAAAGGCCTCAACTTACGGCCAAATAGGGTTTCAAATGCCTCGAGATACGAGTGCTTGTACGGCTGGGATTTCAGCACGTCCAACCATTTGTTGCAGTCCGACGTCGTTTCTTTGGCGCAGGAGATCGTACGGTGTAAAACGCCGTTGAGTGTGTTGATCAGGAGCAAACGTGGGGTGAATGATGCGGTGAAGGTTTCAGTTAGGTTTAAAGGGAGAACAACAATAGTGGACACTATAGCCCGGCCGGGGCTCCGGCCAGGACTCGTCGAACCGCCCCGGAATAAAGAGCACGTAATGTGTATATGCTCCATGGTGAGGAACCAGGGTCGGTTCTTGAAGGAATGGGTCATGTACCATGCTGAAATGGGAGTGCAACGTTGGTTTATTTACGACAACAATAGTGATGATGAAACTGATGTCGTTATTGAGCTTCTACAGAGTGGGAACTACAATATTACCCGGCACCTGTGGCCTTGGATTAAGACCCAGGAGGCCGGGTTCGCTCATTGCGCGTTGAGGTCACGCGAGACGTGCCAGTGGGTCGGGTTTATTGATGTGGACGAGTTTTTTCACATGCCTTTGGGTCCAAGAATGGTTATGGTGAGGTTCAGGCTTGGTGCTATAGTTTTGGGCCGTCGGGCCTCAAGAGTGTCCCAATTCAGGGGCGTGACGGTGGGGTACACTTGTCGCGTGGCCGCCCCAGAGAGGCACAAGAGCATTGTGAAGCCGGAGGCGTTGGATTCCACATTGATGAATGTGGTGCACCATTTCAAACTTAGAAATGGTTACGAGGCAGTGAAAGCGGATAGGGGAGTGTTGGTTATCAATCACTACAAGTACCAAGTGTGGGAGGTTTTTAAGGAGAAGTTCTATAGGAGAGTGGCGACCTATGTGGCGGACTGGCAGGAGGAGCAGAATGTGGGTTCCAAGGATCGAGCCCCGGGATTGGGGAGGAAGGCGGTGGAGCCACCGGATTGGCCGGAGAGGTTTTGCGAGGTTAATGACACTGGACTTAGGAACCGGGTGTTGAAGAACTTGGCTGATCCGTATACAAGGCTTTTGCCGTGGCAGGAGGGTTATCAGAAACATGAGAAGAGAAGGGTGAGAAGGAGAAAGAGAAAGAGACGAAAGCATAGAGTTCGAGAGTTTGAATTTGAGATCTTATGGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_92 zf-C3HC4

Protein Analysis

582

Amino Acids

67.73

Weight (kDa)

9.86

Isoelectric Point (pI)

41.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_92	PF01697	287 - 384	1.7e-23	Glycosyltransferase family 92
Glyco_tranf_2_4	PF13704	298 - 386	5.2e-12	Glycosyl transferase family 2
Glyco_transf_92	PF01697	416 - 492	2e-08	Glycosyltransferase family 92

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27330 AT5G40720 AT5G40720 AT5G40720
fragaria_vesca	FvH4_6g52450 FvH4_6g52460 FvH4_6g52470 FvH4_6g52470
malus_domestica	MD09G1017800.v1.1 MD09G1017900.v1.1 MD17G1018600.v1.1
prunus_persica	Prupe.3G299100_v2.0.a1
pyrus_communis	pycom111g01480 pycom111g01490 pycom17g01530
rosa_chinensis	RchiOBHm_Chr2g0174091 RchiOBHm_Chr2g0174101 RchiOBHm_Chr2g0174111
rosa_laevigata	RLG00000021621 RLG00000022246 RLG00000022247
rosa_multiflora	Rmu_co8270263.1_g000001 Rmu_co8399791.1_g000001 Rmu_sc0003016.1_g000002 Rmu_sc0003016.1_g000003 Rmu_sc0003188.1_g000035 Rmu_sc0003188.1_g000036 Rmu_sc0012378.1_g000002 Rmu_sc0023199.1_g000001 Rmu_sc0023199.1_g000002
rosa_roxburghii	Rroxscaffold_2G00078450 Rroxscaffold_2G00078460 Rroxscaffold_2G00084880
rosa_rugosa	Rorug02G0523200 Rorug02G0574700 Rorug02G0574700
rosa_samantha	Rh2AG589300 Rh2AG654100 Rh2AG654200 Rh2AG654300 Rh2BG601500 Rh2BG665300 Rh2BG665400 Rh2BG665500 Rh2CG572000 Rh2CG629600 Rh2CG629700 Rh2DG611900 Rh2DG612000 Rh2DG680000 Rh2DG680100
rosa_wichuraiana	Rw2G053700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	681
AccB1I	GGYRCC	3 cut(s)	429, 502, 1038
AccB7I	CCANNNNNTGG	2 cut(s)	63, 274
AccBSI	CCGCTC	1 cut(s)	388
AccI	GTMKAC	1 cut(s)	1625
AccII	CGCG	3 cut(s)	1088, 1101, 1266
AccIII	TCCGGA	1 cut(s)	443
AclI	AACGTT	1 cut(s)	952
AclWI	GGATC	5 cut(s)	80, 401, 414, 1515, 1613
AcoI	YGGCCR	6 cut(s)	188, 593, 818, 830, 1269, 1553
AcsI	RAATTY	1 cut(s)	1727
AcvI	CACGTG	1 cut(s)	516
AcyI	GRCGYC	1 cut(s)	678
AfaI	GTAC	7 cut(s)	426, 512, 635, 705, 929, 1256, 1415
AflIII	ACRYGT	1 cut(s)	513
AgeI	ACCGGT	1 cut(s)	299
AgsI	TTSAA	8 cut(s)	103, 376, 475, 609, 913, 1348, 1606, 1727
AhdI	GACNNNNNGTC	1 cut(s)	496
AjiI	CACGTC	2 cut(s)	654, 1107
AjnI	CCWGG	5 cut(s)	62, 169, 832, 897, 1062
AjuI	GAANNNNNNNTTGG	2 cut(s)	589, 621
AloI	GAACNNNNNNTCC	2 cut(s)	1058, 1090
AluBI	AGCT	2 cut(s)	347, 1006
AluI	AGCT	2 cut(s)	347, 1006
Alw21I	GWGCWC	3 cut(s)	86, 867, 1341
Alw26I	GTCTC	5 cut(s)	31, 240, 441, 1097, 1693
Alw44I	GTGCAC	2 cut(s)	82, 1337
AlwI	GGATC	5 cut(s)	80, 401, 414, 1515, 1613
AlwNI	CAGNNNCTG	1 cut(s)	274
Ama87I	CYCGRG	2 cut(s)	616, 1516
Aor13HI	TCCGGA	1 cut(s)	443
ApaLI	GTGCAC	2 cut(s)	82, 1337
ApeKI	GCWGC	2 cut(s)	259, 436
ApoI	RAATTY	1 cut(s)	1727
AsiGI	ACCGGT	1 cut(s)	299
AspLEI	GCGC	2 cut(s)	694, 1088
AspS9I	GGNCC	5 cut(s)	8, 265, 1160, 1207, 1215
AsuC2I	CCSGG	9 cut(s)	364, 817, 822, 853, 1036, 1072, 1517, 1518, 1598
AsuHPI	GGTGA	7 cut(s)	118, 223, 763, 775, 901, 1189, 1690
AvaI	CYCGRG	2 cut(s)	616, 1516
AvaII	GGWCC	3 cut(s)	8, 265, 1160
BaeGI	GKGCMC	3 cut(s)	86, 434, 1341
BaeI	ACNNNNGTAYC	2 cut(s)	1246, 1279
BalI	TGGCCA	1 cut(s)	190
BamHI	GGATCC	1 cut(s)	406
BanI	GGYRCC	3 cut(s)	429, 502, 1038
BanII	GRGCYC	2 cut(s)	828, 1516
BbrPI	CACGTG	1 cut(s)	516
Bbv12I	GWGCWC	3 cut(s)	86, 867, 1341
BbvI	GCAGC	2 cut(s)	246, 423
BccI	CCATC	2 cut(s)	95, 180
BceAI	ACGGC	9 cut(s)	194, 415, 466, 502, 608, 652, 703, 1194, 1624
BcgI	CGANNNNNNTGC	2 cut(s)	1697, 1731
BciT130I	CCWGG	5 cut(s)	64, 171, 834, 899, 1064
BclI	TGATCA	1 cut(s)	732
BcnI	CCSGG	9 cut(s)	364, 817, 822, 853, 1036, 1072, 1517, 1518, 1598
BcoDI	GTCTC	5 cut(s)	31, 240, 441, 1097, 1693
BfmI	CTRYAG	5 cut(s)	437, 810, 1010, 1197, 1447
BglII	AGATCT	1 cut(s)	1734
BisI	GCNGC	4 cut(s)	260, 386, 437, 1272
BlsI	GCNGC	4 cut(s)	261, 387, 438, 1273
Bme18I	GGWCC	3 cut(s)	8, 265, 1160
BmeRI	GACNNNNNGTC	1 cut(s)	496
BmeT110I	CYCGRG	2 cut(s)	616, 1516
BmgBI	CACGTC	2 cut(s)	654, 1107
BmgT120I	GGNCC	5 cut(s)	8, 265, 1160, 1207, 1215
BmsI	GCATC	2 cut(s)	526, 748
BpmI	CTGGAG	1 cut(s)	85
BpuEI	CTTGAG	1 cut(s)	1204
BpuMI	CCSGG	9 cut(s)	364, 817, 822, 853, 1036, 1072, 1517, 1518, 1598
BsaAI	YACGTR	3 cut(s)	20, 516, 868
BsaHI	GRCGYC	1 cut(s)	678
BsaI	GGTCTC	1 cut(s)	31
BsaWI	WCCGGW	4 cut(s)	226, 299, 443, 1546
BsaXI	ACNNNNNCTCC	6 cut(s)	730, 760, 1058, 1088, 1380, 1410
Bse118I	RCCGGY	1 cut(s)	299
Bse1I	ACTGG	6 cut(s)	268, 279, 531, 1111, 1481, 1588
Bse3DI	GCAATG	1 cut(s)	1081
BseAI	TCCGGA	1 cut(s)	443
BseBI	CCWGG	5 cut(s)	64, 171, 834, 899, 1064
BseMI	GCAATG	1 cut(s)	1081
BseMII	CTCAG	1 cut(s)	357
BseNI	ACTGG	6 cut(s)	268, 279, 531, 1111, 1481, 1588
BseRI	GAGGAG	4 cut(s)	101, 104, 137, 1499
BseSI	GKGCMC	3 cut(s)	86, 434, 1341
BseX3I	CGGCCG	1 cut(s)	818
BseXI	GCAGC	2 cut(s)	246, 423
BseYI	CCCAGC	1 cut(s)	639
Bsh1236I	CGCG	3 cut(s)	1088, 1101, 1266
Bsh1285I	CGRYCG	2 cut(s)	304, 821
BshNI	GGYRCC	3 cut(s)	429, 502, 1038
BshTI	ACCGGT	1 cut(s)	299
BsiEI	CGRYCG	2 cut(s)	304, 821
BsiHKAI	GWGCWC	3 cut(s)	86, 867, 1341
BsiHKCI	CYCGRG	2 cut(s)	616, 1516
BsiWI	CGTACG	1 cut(s)	703
BslFI	GGGAC	2 cut(s)	533, 1213
BsmAI	GTCTC	5 cut(s)	31, 240, 441, 1097, 1693
BsmBI	CGTCTC	4 cut(s)	240, 441, 1097, 1693
BsmFI	GGGAC	2 cut(s)	533, 1213
Bso31I	GGTCTC	1 cut(s)	31
BsoBI	CYCGRG	2 cut(s)	616, 1516
Bsp1286I	GDGCHC	6 cut(s)	86, 434, 828, 867, 1341, 1516
Bsp13I	TCCGGA	1 cut(s)	443
Bsp143I	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
Bsp19I	CCATGG	1 cut(s)	885
BspCNI	CTCAG	1 cut(s)	356
BspEI	TCCGGA	1 cut(s)	443
BspFNI	CGCG	3 cut(s)	1088, 1101, 1266
BspMAI	CTGCAG	1 cut(s)	441
BspPI	GGATC	5 cut(s)	80, 401, 414, 1515, 1613
BspT107I	GGYRCC	3 cut(s)	429, 502, 1038
BspTNI	GGTCTC	1 cut(s)	31
BsrBI	CCGCTC	1 cut(s)	388
BsrDI	GCAATG	1 cut(s)	1081
BsrFI	RCCGGY	1 cut(s)	299
BsrI	ACTGG	6 cut(s)	268, 279, 531, 1111, 1481, 1588
BssAI	RCCGGY	1 cut(s)	299
BssMI	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
BssNAI	GTATAC	1 cut(s)	1626
BssNI	GRCGYC	1 cut(s)	678
BssT1I	CCWWGG	3 cut(s)	885, 1049, 1503
Bst1107I	GTATAC	1 cut(s)	1626
Bst2UI	CCWGG	5 cut(s)	64, 171, 834, 899, 1064
Bst4CI	ACNGT	5 cut(s)	196, 429, 565, 708, 1249
Bst6I	CTCTTC	4 cut(s)	29, 155, 377, 1664
BstACI	GRCGYC	1 cut(s)	678
BstBAI	YACGTR	3 cut(s)	20, 516, 868
BstC8I	GCNNGC	1 cut(s)	434
BstDEI	CTNAG	4 cut(s)	182, 343, 1352, 1589
BstDSI	CCRYGG	2 cut(s)	885, 1640
BstEII	GGTNACC	1 cut(s)	229
BstENI	CCTNNNNNAGG	1 cut(s)	67
BstFNI	CGCG	3 cut(s)	1088, 1101, 1266
BstHHI	GCGC	2 cut(s)	694, 1088
BstKTI	GATC	7 cut(s)	75, 409, 702, 735, 1510, 1621, 1737
BstMAI	GTCTC	5 cut(s)	31, 240, 441, 1097, 1693
BstMBI	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
BstMCI	CGRYCG	2 cut(s)	304, 821
BstNI	CCWGG	5 cut(s)	64, 171, 834, 899, 1064
BstNSI	RCATGY	1 cut(s)	1153
BstPI	GGTNACC	1 cut(s)	229
BstSFI	CTRYAG	5 cut(s)	437, 810, 1010, 1197, 1447
BstSLI	GKGCMC	3 cut(s)	86, 434, 1341
BstUI	CGCG	3 cut(s)	1088, 1101, 1266
BstV1I	GCAGC	2 cut(s)	246, 423
BstX2I	RGATCY	3 cut(s)	72, 406, 1734
BstXI	CCANNNNNNTGG	1 cut(s)	1551
BstYI	RGATCY	3 cut(s)	72, 406, 1734
BstZ17I	GTATAC	1 cut(s)	1626
BstZI	CGGCCG	1 cut(s)	818
BtgI	CCRYGG	2 cut(s)	885, 1640
BtrI	CACGTC	2 cut(s)	654, 1107
BtsI	GCAGTG	1 cut(s)	1377
BtsIMutI	CAGTG	5 cut(s)	272, 524, 1118, 1377, 1581
Cac8I	GCNNGC	1 cut(s)	434
CaiI	CAGNNNCTG	1 cut(s)	274
CfoI	GCGC	2 cut(s)	694, 1088
Cfr10I	RCCGGY	1 cut(s)	299
Cfr13I	GGNCC	5 cut(s)	8, 265, 1160, 1207, 1215
Cfr9I	CCCGGG	1 cut(s)	1516
Csp6I	GTAC	7 cut(s)	425, 511, 634, 704, 928, 1255, 1414
CspAI	ACCGGT	1 cut(s)	299
CspCI	CAANNNNNGTGG	2 cut(s)	783, 818
CviAII	CATG	6 cut(s)	394, 886, 925, 932, 1150, 1664
CviQI	GTAC	7 cut(s)	425, 511, 634, 704, 928, 1255, 1414
DdeI	CTNAG	4 cut(s)	182, 343, 1352, 1589
DpnI	GATC	7 cut(s)	74, 408, 701, 734, 1509, 1620, 1736
DpnII	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
DraI	TTTAAA	1 cut(s)	784
DriI	GACNNNNNGTC	1 cut(s)	496
EaeI	YGGCCR	6 cut(s)	188, 593, 818, 830, 1269, 1553
EagI	CGGCCG	1 cut(s)	818
Eam1104I	CTCTTC	4 cut(s)	29, 155, 377, 1664
Eam1105I	GACNNNNNGTC	1 cut(s)	496
EarI	CTCTTC	4 cut(s)	29, 155, 377, 1664
EciI	GGCGGA	2 cut(s)	349, 1487
EclXI	CGGCCG	1 cut(s)	818
Eco130I	CCWWGG	3 cut(s)	885, 1049, 1503
Eco147I	AGGCCT	1 cut(s)	582
Eco24I	GRGCYC	2 cut(s)	828, 1516
Eco31I	GGTCTC	1 cut(s)	31
Eco47I	GGWCC	3 cut(s)	8, 265, 1160
Eco52I	CGGCCG	1 cut(s)	818
Eco72I	CACGTG	1 cut(s)	516
Eco88I	CYCGRG	2 cut(s)	616, 1516
Eco91I	GGTNACC	1 cut(s)	229
EcoNI	CCTNNNNNAGG	1 cut(s)	67
EcoO65I	GGTNACC	1 cut(s)	229
EcoRII	CCWGG	5 cut(s)	62, 169, 832, 897, 1062
EcoT14I	CCWWGG	3 cut(s)	885, 1049, 1503
EcoT38I	GRGCYC	2 cut(s)	828, 1516
ErhI	CCWWGG	3 cut(s)	885, 1049, 1503
Esp3I	CGTCTC	4 cut(s)	240, 441, 1097, 1693
FaeI	CATG	6 cut(s)	397, 889, 928, 935, 1153, 1667
FaqI	GGGAC	2 cut(s)	533, 1213
FatI	CATG	6 cut(s)	393, 885, 924, 931, 1149, 1663
FauI	CCCGC	1 cut(s)	441
FbaI	TGATCA	1 cut(s)	732
FblI	GTMKAC	1 cut(s)	1625
Fnu4HI	GCNGC	4 cut(s)	260, 386, 437, 1272
FriOI	GRGCYC	2 cut(s)	828, 1516
Fsp4HI	GCNGC	4 cut(s)	260, 386, 437, 1272
GlaI	GCGC	2 cut(s)	693, 1087
GluI	GCNGC	4 cut(s)	260, 386, 437, 1272
GsaI	CCCAGC	1 cut(s)	643
GsuI	CTGGAG	1 cut(s)	85
HhaI	GCGC	2 cut(s)	694, 1088
Hin1I	GRCGYC	1 cut(s)	678
Hin1II	CATG	6 cut(s)	397, 889, 928, 935, 1153, 1667
Hin6I	GCGC	2 cut(s)	692, 1086
HinP1I	GCGC	2 cut(s)	692, 1086
HinfI	GANTC	3 cut(s)	521, 837, 1316
HphI	GGTGA	7 cut(s)	118, 223, 763, 775, 901, 1189, 1690
Hpy166II	GTNNAC	7 cut(s)	84, 513, 805, 1135, 1257, 1339, 1626
Hpy188I	TCNGA	4 cut(s)	155, 245, 676, 1659
Hpy188III	TCNNGA	7 cut(s)	444, 574, 618, 736, 910, 1221, 1718
Hpy8I	GTNNAC	7 cut(s)	84, 513, 805, 1135, 1257, 1339, 1626
Hpy99I	CGWCG	8 cut(s)	494, 502, 511, 569, 680, 683, 845, 1215
HpyAV	CCTTC	6 cut(s)	139, 760, 907, 1525, 1668, 1677
HpyCH4III	ACNGT	5 cut(s)	196, 429, 565, 708, 1249
HpyCH4V	TGCA	6 cut(s)	84, 333, 439, 670, 949, 1339
HpyF3I	CTNAG	4 cut(s)	182, 343, 1352, 1589
Hsp92I	GRCGYC	1 cut(s)	678
Hsp92II	CATG	6 cut(s)	397, 889, 928, 935, 1153, 1667
HspAI	GCGC	2 cut(s)	692, 1086
Kpn2I	TCCGGA	1 cut(s)	443
Ksp22I	TGATCA	1 cut(s)	732
Kzo9I	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
LmnI	GCTCC	7 cut(s)	66, 150, 738, 831, 887, 1486, 1540
Lsp1109I	GCAGC	2 cut(s)	246, 423
LweI	GCATC	2 cut(s)	526, 748
MalI	GATC	7 cut(s)	74, 408, 701, 734, 1509, 1620, 1736
MbiI	CCGCTC	1 cut(s)	388
MboI	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
MboII	GAAGA	9 cut(s)	46, 67, 82, 88, 91, 142, 364, 1618, 1681
MflI	RGATCY	3 cut(s)	72, 406, 1734
MhlI	GDGCHC	6 cut(s)	86, 434, 828, 867, 1341, 1516
MlsI	TGGCCA	1 cut(s)	190
MluCI	AATT	3 cut(s)	58, 1232, 1727
MluNI	TGGCCA	1 cut(s)	190
MlyI	GAGTC	2 cut(s)	515, 831
MmeI	TCCRAC	3 cut(s)	681, 699, 1293
Mox20I	TGGCCA	1 cut(s)	190
MroI	TCCGGA	1 cut(s)	443
MscI	TGGCCA	1 cut(s)	190
MseI	TTAA	4 cut(s)	783, 1056, 1434, 1575
MslI	CAYNNNNRTG	1 cut(s)	1325
Msp20I	TGGCCA	1 cut(s)	190
MspA1I	CMGCKG	1 cut(s)	436
MvaI	CCWGG	5 cut(s)	64, 171, 834, 899, 1064
MvnI	CGCG	3 cut(s)	1088, 1101, 1266
NciI	CCSGG	9 cut(s)	364, 817, 822, 853, 1036, 1072, 1517, 1518, 1598
NcoI	CCATGG	1 cut(s)	885
NdeII	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
NlaIII	CATG	6 cut(s)	397, 889, 928, 935, 1153, 1667
NmuCI	GTSAC	4 cut(s)	229, 270, 1095, 1243
NspI	RCATGY	1 cut(s)	1153
PaeR7I	CTCGAG	1 cut(s)	616
PceI	AGGCCT	1 cut(s)	582
PcsI	WCGNNNNNNNCGW	2 cut(s)	503, 506
PfeI	GAWTC	1 cut(s)	1316
Pfl23II	CGTACG	1 cut(s)	703
PflMI	CCANNNNNTGG	2 cut(s)	63, 274
PfoI	TCCNGGA	1 cut(s)	62
PinAI	ACCGGT	1 cut(s)	299
PkrI	GCNGC	4 cut(s)	261, 387, 438, 1273
PleI	GAGTC	2 cut(s)	515, 831
PmaCI	CACGTG	1 cut(s)	516
PmlI	CACGTG	1 cut(s)	516
PpsI	GAGTC	2 cut(s)	515, 831
Ppu21I	YACGTR	3 cut(s)	20, 516, 868
Psp1406I	AACGTT	1 cut(s)	952
Psp6I	CCWGG	5 cut(s)	62, 169, 832, 897, 1062
PspCI	CACGTG	1 cut(s)	516
PspEI	GGTNACC	1 cut(s)	229
PspFI	CCCAGC	1 cut(s)	639
PspGI	CCWGG	5 cut(s)	62, 169, 832, 897, 1062
PspLI	CGTACG	1 cut(s)	703
PspPI	GGNCC	5 cut(s)	8, 265, 1160, 1207, 1215
PstI	CTGCAG	1 cut(s)	441
PstNI	CAGNNNCTG	1 cut(s)	274
PsuI	RGATCY	3 cut(s)	72, 406, 1734
RsaI	GTAC	7 cut(s)	426, 512, 635, 705, 929, 1256, 1415
RsaNI	GTAC	7 cut(s)	425, 511, 634, 704, 928, 1255, 1414
RseI	CAYNNNNRTG	1 cut(s)	1325
SaqAI	TTAA	4 cut(s)	783, 1056, 1434, 1575
SatI	GCNGC	4 cut(s)	260, 386, 437, 1272
Sau3AI	GATC	7 cut(s)	72, 406, 699, 732, 1507, 1618, 1734
Sau96I	GGNCC	5 cut(s)	8, 265, 1160, 1207, 1215
SchI	GAGTC	2 cut(s)	515, 831
SduI	GDGCHC	6 cut(s)	86, 434, 828, 867, 1341, 1516
SfaNI	GCATC	2 cut(s)	526, 748
SfcI	CTRYAG	5 cut(s)	437, 810, 1010, 1197, 1447
Sfr274I	CTCGAG	1 cut(s)	616
SinI	GGWCC	3 cut(s)	8, 265, 1160
SlaI	CTCGAG	1 cut(s)	616
SmaI	CCCGGG	1 cut(s)	1518
SmiMI	CAYNNNNRTG	1 cut(s)	1325
SmlI	CTYRAG	2 cut(s)	616, 1219
SmoI	CTYRAG	2 cut(s)	616, 1219
Sse9I	AATT	3 cut(s)	58, 1232, 1727
SseBI	AGGCCT	1 cut(s)	582
SspI	AATATT	1 cut(s)	1030
StuI	AGGCCT	1 cut(s)	582
StyI	CCWWGG	3 cut(s)	885, 1049, 1503
TaaI	ACNGT	5 cut(s)	196, 429, 565, 708, 1249
TaqI	TCGA	8 cut(s)	166, 295, 327, 390, 617, 843, 1510, 1717
TaqII	GACCGA	1 cut(s)	25
TasI	AATT	3 cut(s)	58, 1232, 1727
TauI	GCSGC	2 cut(s)	388, 1274
TfiI	GAWTC	1 cut(s)	1316
Tru1I	TTAA	4 cut(s)	783, 1056, 1434, 1575
Tru9I	TTAA	4 cut(s)	783, 1056, 1434, 1575
TscAI	CASTG	5 cut(s)	279, 531, 1118, 1377, 1588
TseFI	GTSAC	4 cut(s)	229, 270, 1095, 1243
TseI	GCWGC	2 cut(s)	259, 436
Tsp45I	GTSAC	4 cut(s)	229, 270, 1095, 1243
TspDTI	ATGAA	4 cut(s)	17, 82, 999, 1343
TspGWI	ACGGA	1 cut(s)	1611
TspMI	CCCGGG	1 cut(s)	1516
TspRI	CASTG	5 cut(s)	279, 531, 1118, 1377, 1588
Van91I	CCANNNNNTGG	2 cut(s)	63, 274
VneI	GTGCAC	2 cut(s)	82, 1337
VpaK11BI	GGWCC	3 cut(s)	8, 265, 1160
XagI	CCTNNNNNAGG	1 cut(s)	67
XapI	RAATTY	1 cut(s)	1727
XceI	RCATGY	1 cut(s)	1153
XhoI	CTCGAG	1 cut(s)	616
XmaI	CCCGGG	1 cut(s)	1516
XmiI	GTMKAC	1 cut(s)	1625
ZraI	GACGTC	1 cut(s)	679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.