Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002006

Physical Location & Seq

Genomic Coordinates Reverse (-)

10273098 .. 10280646

Gene Structure 7549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G27730.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3402 bp

ATGGATACACACACGCTCAAATCTGTCTCAGATTTGCCTGGAAATTTCCGTTCAGCTTTCAGTTTCAGATACTTTAACTCGCTGCAGAGCGAGTGCTTTCCGCTTTGCTTTCACTCCGATATCAACATGATTATTTCTGCGCCAACGGGAAGTGGTAAAACTGTACTTTTTGAGCTTTGCATTTTGAGGCTCTTCTCAAAGTCCATCTCTAAGGAAGGAAGTTTTCTCCATGCTAAAGGAGCTCTTAAAACAGTTTACATATCTCCGTCTAAGGCTTTAGTTCAGGAGAAGCTGCGTGATTGGAATCAAAAGTTCAATTCATGGGGAATCAGTTGTTTGGAGCTGACAGGTGATAATGAAACCTACAGCACTAAGAATATACAAGACGCAGATATTATCTTGACCACACCTGAGAAATTTGATGCAGTAAGCCGTTATCGTGTTACCAGTGGAGGATTAGGTTTCTTCAGCGATATTGCGCTTGTGCTCATTGATGAAGTTCACCTACTGAATGATCCGCGTGGAGCTGCTCTTGAGGCAATAGTCAGTAGATTAAAGATTCTTTCTAGCAATCATGAACTAAGGTCAAGTACTTTAGCCTCTGTGCGTCTTCTGGCTGTCTCAGCTACTATCCCAAACATTGAAGATCTAGCTGAATGGCTCAAGGTTCCTACTGCAGGAATTAAGAGGTTTGGCGAAGAAATGAGACCTGTTAAGTTGACAACGAAAGTTTTTGGTTATGCTGCTGCCAAGAATGACTTCCTCTTTGAAAAGCGCCTCCAAAACTATATTTATGACATTTTAATGCAATACTCAAAAGGAAAATCTGCCTTAGTTTTCTGCTCGACACGAAAAGGCGCTCAAGAGGCTGCACAAAAGCTAGCTCAGACTGCAATGACCTATGGTTACTCAAATCCATTTATTAAAAGCAGAGAACAACTGGAACGATTAAGGGAGGCTTCGCCGATGTGCAGTGACAAACAAATGCAATCATATATCCTCCAAGGCGTTGGTTATCACAATGGTGGACTTTGCCAAAAGGACCGCAGCCTCGTAGAAGGGCTCTTCCTGAATGGAGATATCCAAGTTATCTGCACGACCAACACTCTTGCCCATGGAATCAACCTGCCTGCACATACAGTGGTCATTAAATCAACTCAACATTTCAACAAGGAAAAAGGTCACTACATGGAATATGATCGTTCCACTCTACTACAGATGTCTGGCAGGGCTGGTCGGCCTCCATTTGATGACACGGGAATGGTTATTATTATGACGAGAAGAGAGACGGTCCATCTATATGAGAATCTCTTGAATGGATGCGAAGTTGTTGAGTCACAATTGCTGCCATGCTTAATAGAGCACCTAACCGCAGAAATAGTGCAACTTACTATCTCTGACATTACACGGGCAATTGAGTGGATGAAGTGCTCATACCTGTATGTCAGAATGAAAAAGAATCCGGAGAATTATGCTATTAAAAAAGGAATTCCTAAAGATCGGGTAGAGAAGCATTTGCAAGAGCTTTGCCTTCAGAAGATCAATGAGCTTTCACAATATCAGATGATCTGGACTGACACAGACGGTTTTGTTTTGAAACCAGAAGAGCCCGGAAGGCTGATGACAAAGTATTATCTAAAGTTTGAAACAATGAAGTACATTATTAATACGCCAACGAGCTATAGCTTGGATGAGGCTCTTCATATTGTATGTCATGCTGAAGAGATATCTTGGATACAGCTCAGACGCAATGAGAAGAAGACCTTAAATGATGTAAATGCAGATAAAGAAGGGCGGCTCAGATTCCACATCAACGATAATAAAGGAAAGCGGAAAAAACGTATCCAAACCAGAGAAGAGAAACTCTTTGTGCTTGCAAATGATTGGTTGACTGGGGATCCTTCAGTCCATGATTTATCCATGACTCAGGATGCTAACTCTATTTGCTCGAACGGATCCAGAATAGCCAGATGCATGAAAGAGTACTTTATATACAAAAAGAATTATAAAGGAACTCTTAGCTCAACTCTTCTTGCAAAATCACTCTATCAAAAGCTCTGGGACGACAGTCCATATTTGCTGAAACAATTGCCTGGCATTGGAATGGTTACAGCTAAGGCACTTCATTCGATGGGAGTCAGGTCATTTGAAGCTCTTGCAGAAGCTGATCCGCGAAGGATAGAGATTGTTACCGGCCGAAAATATCCTTTCGGAAATACCATCAAGGAGTCTCTATCATCACTACCTCCAAAAGTTGAAATCAAGGTCGAGGAAGTGGACTGTCAGAAGCAAGGGATATCTAAACTAGCAGTCACATTGTCACGGGTATCACAACCTCTCCAATCCACAAAACGCCACTACGCTGACTTGATTGTTGGTTCAGAGGAAGAGAATCTTATCCACTTTCATGAGAAAATAAGAATGGAGGACTTCTCCAGTCCCTATAGCGTAACCGTACTCTTGGAAAGGCCTCATCAACAAACAAAGGTGACTGTGAAGGCTGATCTCATCTTTGAAGAATACATTGGTATTGACCTCCACGAAACACTTCTACTGAAGAAGGCAAACAACAACAAAGTAAATTACAAAAGCGAAAACAGGATGCCTCAGTATTATCCTCCTATGGCAAGTGCCTGCATAGCAGATGATGACAACCCAGTTACATCTGGACCTTCAAACCGAAAGGATAAAAAAGATGATATGCCTAGTTTCAAGCTCATCGATGATGATTCAGAAGAAGAGAAAGAGCCCTATGTGACAATGGAAGAAGATGACTGTGTCATTATCAATGAACATACAGTCTTTGACCACATACGTGAAAAAGCTAAGTGTTTTCCTTCATTGAACCCTTTGAATCCAACCTCCTCTCCAGCATCAGGAAAATCAATTCTGAAAAGGAAAAGCTTAGTGGAGAATAATTCTCCTGAACTGGATCCTCTATTTCAGTATGATTCTGTGTTTGACTTACCTACAAATACTAAAGACATCAAACAAAGCGCACAGCAAATTACTAGCCCGGGTTATGCAAGCTTTGCAGAGAAAACTGAAACAGAAAGACCATTCTCAGATGAAACAATATTTAACTACATAAGGAAAAGGTCCAAGAATTCTCCGGCACTCGCCACATCGAAAATCGAGAATCCTATAACCATTTCTTCTCAAGAAGGAAGAAACGCAGAGATAAGCCCGTATAGAACATATGGATTATTGGTTAGCCCTGCTACTAAAATTCCAAGGATCACATCTGATGCACCTTCAGAAATTCTGTCCTTTGATATCTCGATGGTAAAGAGAAGTGACACGAGCTTAGAGCAGACTAAAGGATTCTGCTCGACACTTGCAGGTAAGTCCAATGTCTCTGATTCTTTTCTTGGATTTAAAAGCATCTTCTCTTTTCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0051026 GO:0051276 GO:0051321 GO:0061982 GO:0070013 GO:0070035 GO:0070192 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:0140097 GO:0140098 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HHH_5 Helicase_C PPR Sec63

Protein Analysis

1133

Amino Acids

128.29

Weight (kDa)

8.14

Isoelectric Point (pI)

45.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	27 - 216	2.3e-28	DEAD/DEAH box helicase
ResIII	PF04851	38 - 181	1.5e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	336 - 413	3.1e-08	Helicase conserved C-terminal domain
WHD_SNRNP200	PF23445	445 - 523	7.8e-14	Winged Helix-turn-helix domain
Sec63	PF02889	534 - 849	9.6e-46	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730
fragaria_vesca	FvH4_6g51100
malus_domestica	MD09G1029000.v1.1 MD09G1029100.v1.1
prunus_persica	Prupe.3G288900_v2.0.a1
pyrus_communis	pycom111g02300 pycom111g02310
rosa_chinensis	RchiOBHm_Chr2g0089321 RchiOBHm_Chr2g0172661 RchiOBHm_Chr2g0172671
rosa_laevigata	RLG00000022075 RLG00000022122 RLG00000022126
rosa_multiflora	Rmu_sc0002053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00079680 Rroxscaffold_2G00080200 Rroxscaffold_2G00080420
rosa_rugosa	Rorug01G0489000 Rorug01G0489100 Rorug02G0246000 Rorug02G0560500.1
rosa_samantha	Rh2AG637300 Rh2AG637400 Rh2AG637500 Rh2AG637900 Rh2BG650700 Rh2BG650800 Rh2BG650900 Rh2BG651500 Rh2CG045200 Rh2CG045300 Rh2CG610500 Rh2CG617200 Rh2CG617600 Rh2DG658400 Rh2DG664700 Rh2DG665400
rosa_wichuraiana	Rw2G052240 Rw2G052720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2007
Acc36I	ACCTGC	2 cut(s)	1134, 3332
AccII	CGCG	2 cut(s)	520, 2173
AccIII	TCCGGA	1 cut(s)	1462
AciI	CCGC	7 cut(s)	101, 518, 1045, 1371, 1795, 1831, 2171
AclWI	GGATC	9 cut(s)	509, 1892, 1905, 1950, 1963, 2162, 2927, 2940, 3245
AcoI	YGGCCR	1 cut(s)	2194
AcsI	RAATTY	6 cut(s)	43, 416, 1488, 3106, 3228, 3261
AcuI	CTGAAG	6 cut(s)	451, 1517, 1740, 1887, 2576, 3240
AfaI	GTAC	5 cut(s)	165, 592, 1658, 1985, 2457
AfiI	CCNNNNNNNGG	3 cut(s)	677, 2099, 2876
AjnI	CCWGG	2 cut(s)	37, 2092
AjuI	GAANNNNNNNTTGG	4 cut(s)	743, 775, 2508, 2540
AleI	CACNNNNGTG	2 cut(s)	1023, 2814
Alw21I	GWGCWC	4 cut(s)	244, 489, 1365, 1433
Alw26I	GTCTC	6 cut(s)	31, 625, 700, 1280, 2235, 3361
AlwI	GGATC	9 cut(s)	509, 1892, 1905, 1950, 1963, 2162, 2927, 2940, 3245
AlwNI	CAGNNNCTG	1 cut(s)	2165
Ama87I	CYCGRG	1 cut(s)	3016
Aor13HI	TCCGGA	1 cut(s)	1462
AoxI	GGCC	3 cut(s)	1238, 2194, 2468
ApeKI	GCWGC	8 cut(s)	82, 292, 527, 743, 746, 869, 1047, 1345
ApoI	RAATTY	6 cut(s)	43, 416, 1488, 3106, 3228, 3261
ArsI	GACNNNNNNTTYG	2 cut(s)	749, 781
AseI	ATTAAT	1 cut(s)	1665
Asp700I	GAANNNNTTC	2 cut(s)	758, 2547
AspLEI	GCGC	5 cut(s)	142, 481, 777, 860, 2999
AspS9I	GGNCC	4 cut(s)	1042, 1291, 2669, 3099
AsuC2I	CCSGG	3 cut(s)	1611, 3017, 3018
AsuHPI	GGTGA	3 cut(s)	362, 494, 2500
AsuNHI	GCTAGC	1 cut(s)	880
AvaI	CYCGRG	1 cut(s)	3016
AvaII	GGWCC	4 cut(s)	1042, 1291, 2669, 3099
BamHI	GGATCC	3 cut(s)	1897, 1955, 2932
BanII	GRGCYC	4 cut(s)	244, 1065, 1611, 2751
BarI	GAAGNNNNNNTAC	4 cut(s)	489, 521, 1418, 1450
BauI	CACGAG	1 cut(s)	3301
BbsI	GAAGAC	2 cut(s)	602, 1766
Bbv12I	GWGCWC	4 cut(s)	244, 489, 1365, 1433
BbvI	GCAGC	8 cut(s)	69, 279, 514, 730, 733, 856, 1059, 1332
BccI	CCATC	5 cut(s)	212, 1302, 2125, 2228, 3277
BceAI	ACGGC	1 cut(s)	417
BcgI	CGANNNNNNTGC	2 cut(s)	2109, 2143
BciT130I	CCWGG	2 cut(s)	39, 2094
BciVI	GTATCC	2 cut(s)	1728, 1853
BcnI	CCSGG	3 cut(s)	1611, 3017, 3018
BcoDI	GTCTC	6 cut(s)	31, 625, 700, 1280, 2235, 3361
BfaI	CTAG	6 cut(s)	567, 650, 881, 2306, 2706, 3012
BfmI	CTRYAG	6 cut(s)	83, 364, 675, 1214, 1681, 2443
BfoI	RGCGCY	2 cut(s)	778, 861
BfuAI	ACCTGC	2 cut(s)	1134, 3332
BfuI	GTATCC	2 cut(s)	1728, 1853
BglI	GCCNNNNNGGC	1 cut(s)	1615
BglII	AGATCT	1 cut(s)	646
BisI	GCNGC	9 cut(s)	83, 293, 528, 744, 747, 870, 1048, 1346, 1796
BlsI	GCNGC	9 cut(s)	84, 294, 529, 745, 748, 871, 1049, 1347, 1797
BmcAI	AGTACT	2 cut(s)	592, 1985
Bme1390I	CCNGG	5 cut(s)	39, 1611, 2094, 3017, 3018
Bme18I	GGWCC	4 cut(s)	1042, 1291, 2669, 3099
BmeT110I	CYCGRG	1 cut(s)	3016
BmgT120I	GGNCC	4 cut(s)	1042, 1291, 2669, 3099
BmiI	GGNNCC	4 cut(s)	669, 1899, 1957, 2934
BmrFI	CCNGG	5 cut(s)	39, 1611, 2094, 3017, 3018
BmrI	ACTGGG	2 cut(s)	1902, 2651
BmsI	GCATC	8 cut(s)	412, 1310, 1921, 1961, 2592, 2882, 3238, 3393
BmtI	GCTAGC	1 cut(s)	884
BmuI	ACTGGG	2 cut(s)	1902, 2651
BoxI	GACNNNNGTC	1 cut(s)	2067
BpiI	GAAGAC	2 cut(s)	602, 1766
BplI	GAGNNNNNCTC	2 cut(s)	2417, 2449
BpmI	CTGGAG	2 cut(s)	2419, 2853
Bpu10I	CCTNAGC	1 cut(s)	2115
BpuEI	CTTGAG	4 cut(s)	554, 647, 846, 3144
BpuMI	CCSGG	3 cut(s)	1611, 3017, 3018
Bsa29I	ATCGAT	1 cut(s)	2721
BsaAI	YACGTR	1 cut(s)	2816
BsaBI	GATNNNNATC	1 cut(s)	303
BsaI	GGTCTC	1 cut(s)	700
BsaJI	CCNNGG	4 cut(s)	1003, 1114, 3016, 3233
BsaWI	WCCGGW	1 cut(s)	1462
BsaXI	ACNNNNNCTCC	4 cut(s)	2322, 2352, 2851, 2881
Bsc4I	CCNNNNNNNGG	3 cut(s)	677, 2099, 2876
Bse118I	RCCGGY	1 cut(s)	2192
Bse1I	ACTGG	6 cut(s)	447, 945, 1897, 2436, 2657, 2934
Bse3DI	GCAATG	2 cut(s)	900, 1756
Bse8I	GATNNNNATC	1 cut(s)	303
BseAI	TCCGGA	1 cut(s)	1462
BseBI	CCWGG	2 cut(s)	39, 2094
BseCI	ATCGAT	1 cut(s)	2721
BseDI	CCNNGG	4 cut(s)	1003, 1114, 3016, 3233
BseGI	GGATG	5 cut(s)	1325, 1428, 1696, 1936, 2607
BseJI	GATNNNNATC	1 cut(s)	303
BseLI	CCNNNNNNNGG	3 cut(s)	677, 2099, 2876
BseMI	GCAATG	2 cut(s)	900, 1756
BseMII	CTCAG	9 cut(s)	42, 402, 636, 899, 1756, 1813, 1940, 2621, 3078
BseNI	ACTGG	6 cut(s)	447, 945, 1897, 2436, 2657, 2934
BseRI	GAGGAG	1 cut(s)	2854
BseX3I	CGGCCG	1 cut(s)	2194
BseXI	GCAGC	8 cut(s)	69, 279, 514, 730, 733, 856, 1059, 1332
BsgI	GTGCAG	4 cut(s)	855, 991, 1078, 1116
Bsh1236I	CGCG	2 cut(s)	520, 2173
Bsh1285I	CGRYCG	1 cut(s)	2197
BshFI	GGCC	3 cut(s)	1240, 2196, 2470
BshVI	ATCGAT	1 cut(s)	2721
BsiEI	CGRYCG	1 cut(s)	2197
BsiHKAI	GWGCWC	4 cut(s)	244, 489, 1365, 1433
BsiHKCI	CYCGRG	1 cut(s)	3016
BsiSI	CCGG	5 cut(s)	1463, 1611, 2193, 3017, 3113
BslFI	GGGAC	2 cut(s)	2075, 2424
BslI	CCNNNNNNNGG	3 cut(s)	677, 2099, 2876
BsmAI	GTCTC	6 cut(s)	31, 625, 700, 1280, 2235, 3361
BsmBI	CGTCTC	1 cut(s)	1280
BsmFI	GGGAC	2 cut(s)	2075, 2424
BsnI	GGCC	3 cut(s)	1240, 2196, 2470
Bso31I	GGTCTC	1 cut(s)	700
BsoBI	CYCGRG	1 cut(s)	3016
Bsp1286I	GDGCHC	7 cut(s)	244, 489, 1065, 1365, 1433, 1611, 2751
Bsp13I	TCCGGA	1 cut(s)	1462
Bsp19I	CCATGG	1 cut(s)	1114
BspACI	CCGC	7 cut(s)	101, 518, 1045, 1371, 1795, 1831, 2171
BspANI	GGCC	3 cut(s)	1240, 2196, 2470
BspCNI	CTCAG	9 cut(s)	41, 403, 635, 898, 1755, 1812, 1939, 2620, 3077
BspDI	ATCGAT	1 cut(s)	2721
BspEI	TCCGGA	1 cut(s)	1462
BspFNI	CGCG	2 cut(s)	520, 2173
BspHI	TCATGA	2 cut(s)	574, 2407
BspLI	GGNNCC	4 cut(s)	669, 1899, 1957, 2934
BspMAI	CTGCAG	2 cut(s)	87, 679
BspMI	ACCTGC	2 cut(s)	1134, 3332
BspOI	GCTAGC	1 cut(s)	884
BspPI	GGATC	9 cut(s)	509, 1892, 1905, 1950, 1963, 2162, 2927, 2940, 3245
BspQI	GCTCTTC	4 cut(s)	197, 1070, 1599, 1704
BspTNI	GGTCTC	1 cut(s)	700
BsrDI	GCAATG	2 cut(s)	900, 1756
BsrFI	RCCGGY	1 cut(s)	2192
BsrI	ACTGG	6 cut(s)	447, 945, 1897, 2436, 2657, 2934
BssAI	RCCGGY	1 cut(s)	2192
BssECI	CCNNGG	4 cut(s)	1003, 1114, 3016, 3233
BssSI	CACGAG	1 cut(s)	3301
BssT1I	CCWWGG	3 cut(s)	1003, 1114, 3233
Bst2BI	CACGAG	1 cut(s)	3301
Bst2UI	CCWGG	2 cut(s)	39, 2094
BstAPI	GCANNNNNTGC	1 cut(s)	3032
BstBAI	YACGTR	1 cut(s)	2816
BstC8I	GCNNGC	5 cut(s)	882, 1131, 1875, 2635, 3028
BstDSI	CCRYGG	1 cut(s)	1114
BstENI	CCTNNNNNAGG	1 cut(s)	675
BstF5I	GGATG	5 cut(s)	1325, 1428, 1696, 1936, 2607
BstFNI	CGCG	2 cut(s)	520, 2173
BstH2I	RGCGCY	2 cut(s)	778, 861
BstHHI	GCGC	5 cut(s)	142, 481, 777, 860, 2999
BstMAI	GTCTC	6 cut(s)	31, 625, 700, 1280, 2235, 3361
BstMCI	CGRYCG	1 cut(s)	2197
BstMWI	GCNNNNNNNGC	8 cut(s)	239, 536, 623, 866, 890, 1615, 2639, 3032
BstNI	CCWGG	2 cut(s)	39, 2094
BstPAI	GACNNNNGTC	1 cut(s)	2067
BstSCI	CCNGG	5 cut(s)	37, 1609, 2092, 3015, 3016
BstSFI	CTRYAG	6 cut(s)	83, 364, 675, 1214, 1681, 2443
BstUI	CGCG	2 cut(s)	520, 2173
BstV1I	GCAGC	8 cut(s)	69, 279, 514, 730, 733, 856, 1059, 1332
BstV2I	GAAGAC	2 cut(s)	602, 1766
BstX2I	RGATCY	4 cut(s)	646, 1897, 1955, 2932
BstXI	CCANNNNNNTGG	1 cut(s)	1010
BstYI	RGATCY	4 cut(s)	646, 1897, 1955, 2932
BstZI	CGGCCG	1 cut(s)	2194
Bsu15I	ATCGAT	1 cut(s)	2721
BsuI	GTATCC	2 cut(s)	1728, 1853
BsuRI	GGCC	3 cut(s)	1240, 2196, 2470
BsuTUI	ATCGAT	1 cut(s)	2721
BtgI	CCRYGG	1 cut(s)	1114
BtsCI	GGATG	5 cut(s)	1325, 1428, 1696, 1936, 2607
BtsI	GCAGTG	1 cut(s)	979
BtsIMutI	CAGTG	3 cut(s)	454, 979, 1146
BveI	ACCTGC	2 cut(s)	1134, 3332
Cac8I	GCNNGC	5 cut(s)	882, 1131, 1875, 2635, 3028
CaiI	CAGNNNCTG	1 cut(s)	2165
CciI	TCATGA	2 cut(s)	574, 2407
CfoI	GCGC	5 cut(s)	142, 481, 777, 860, 2999
Cfr10I	RCCGGY	1 cut(s)	2192
Cfr13I	GGNCC	4 cut(s)	1042, 1291, 2669, 3099
Cfr9I	CCCGGG	1 cut(s)	3016
ClaI	ATCGAT	1 cut(s)	2721
CseI	GACGC	3 cut(s)	395, 596, 1755
Csp6I	GTAC	5 cut(s)	164, 591, 1657, 1984, 2456
CviQI	GTAC	5 cut(s)	164, 591, 1657, 1984, 2456
DraI	TTTAAA	1 cut(s)	3379
EaeI	YGGCCR	1 cut(s)	2194
EagI	CGGCCG	1 cut(s)	2194
Ecl136II	GAGCTC	1 cut(s)	242
EclXI	CGGCCG	1 cut(s)	2194
Eco130I	CCWWGG	3 cut(s)	1003, 1114, 3233
Eco147I	AGGCCT	1 cut(s)	2470
Eco24I	GRGCYC	4 cut(s)	244, 1065, 1611, 2751
Eco31I	GGTCTC	1 cut(s)	700
Eco32I	GATATC	5 cut(s)	121, 1081, 1728, 2298, 3277
Eco47I	GGWCC	4 cut(s)	1042, 1291, 2669, 3099
Eco52I	CGGCCG	1 cut(s)	2194
Eco53kI	GAGCTC	1 cut(s)	242
Eco57I	CTGAAG	6 cut(s)	451, 1517, 1740, 1887, 2576, 3240
Eco88I	CYCGRG	1 cut(s)	3016
EcoICRI	GAGCTC	1 cut(s)	242
EcoNI	CCTNNNNNAGG	1 cut(s)	675
EcoRI	GAATTC	2 cut(s)	1488, 3106
EcoRII	CCWGG	2 cut(s)	37, 2092
EcoRV	GATATC	5 cut(s)	121, 1081, 1728, 2298, 3277
EcoT14I	CCWWGG	3 cut(s)	1003, 1114, 3233
EcoT22I	ATGCAT	1 cut(s)	1976
EcoT38I	GRGCYC	4 cut(s)	244, 1065, 1611, 2751
ErhI	CCWWGG	3 cut(s)	1003, 1114, 3233
Esp3I	CGTCTC	1 cut(s)	1280
FaqI	GGGAC	2 cut(s)	2075, 2424
FauNDI	CATATG	1 cut(s)	3199
Fnu4HI	GCNGC	9 cut(s)	83, 293, 528, 744, 747, 870, 1048, 1346, 1796
FokI	GGATG	5 cut(s)	1332, 1435, 1703, 1943, 2614
FriOI	GRGCYC	4 cut(s)	244, 1065, 1611, 2751
Fsp4HI	GCNGC	9 cut(s)	83, 293, 528, 744, 747, 870, 1048, 1346, 1796
FspBI	CTAG	6 cut(s)	567, 650, 881, 2306, 2706, 3012
GlaI	GCGC	5 cut(s)	141, 480, 776, 859, 2998
GluI	GCNGC	9 cut(s)	83, 293, 528, 744, 747, 870, 1048, 1346, 1796
GsuI	CTGGAG	2 cut(s)	2419, 2853
HaeII	RGCGCY	2 cut(s)	778, 861
HaeIII	GGCC	3 cut(s)	1240, 2196, 2470
HapII	CCGG	5 cut(s)	1463, 1611, 2193, 3017, 3113
HgaI	GACGC	3 cut(s)	395, 596, 1755
HhaI	GCGC	5 cut(s)	142, 481, 777, 860, 2999
Hin6I	GCGC	5 cut(s)	140, 479, 775, 858, 2997
HinP1I	GCGC	5 cut(s)	140, 479, 775, 858, 2997
HincII	GTYRAC	2 cut(s)	720, 1890
HindII	GTYRAC	2 cut(s)	720, 1890
HindIII	AAGCTT	2 cut(s)	2902, 3028
HpaII	CCGG	5 cut(s)	1463, 1611, 2193, 3017, 3113
HphI	GGTGA	3 cut(s)	362, 494, 2500
Hpy166II	GTNNAC	6 cut(s)	256, 502, 720, 1028, 1890, 2278
Hpy8I	GTNNAC	6 cut(s)	256, 502, 720, 1028, 1890, 2278
HpyCH4IV	ACGT	2 cut(s)	1840, 2815
HpyF10VI	GCNNNNNNNGC	8 cut(s)	239, 536, 623, 866, 890, 1615, 2639, 3032
HpySE526I	ACGT	2 cut(s)	1840, 2815
HspAI	GCGC	5 cut(s)	140, 479, 775, 858, 2997
Kpn2I	TCCGGA	1 cut(s)	1462
LguI	GCTCTTC	4 cut(s)	197, 1070, 1599, 1704
LmnI	GCTCC	3 cut(s)	239, 340, 524
Lsp1109I	GCAGC	8 cut(s)	69, 279, 514, 730, 733, 856, 1059, 1332
LweI	GCATC	8 cut(s)	412, 1310, 1921, 1961, 2592, 2882, 3238, 3393
MaeI	CTAG	6 cut(s)	567, 650, 881, 2306, 2706, 3012
MaeII	ACGT	2 cut(s)	1840, 2815
MfeI	CAATTG	3 cut(s)	1340, 1413, 2087
MflI	RGATCY	4 cut(s)	646, 1897, 1955, 2932
MhlI	GDGCHC	7 cut(s)	244, 489, 1065, 1365, 1433, 1611, 2751
MlyI	GAGTC	4 cut(s)	1343, 1918, 2145, 2237
MmeI	TCCRAC	1 cut(s)	2882
Mph1103I	ATGCAT	1 cut(s)	1976
MroI	TCCGGA	1 cut(s)	1462
MroXI	GAANNNNTTC	2 cut(s)	758, 2547
MslI	CAYNNNNRTG	7 cut(s)	803, 1023, 1259, 1299, 2102, 2406, 2814
MspI	CCGG	5 cut(s)	1463, 1611, 2193, 3017, 3113
MspR9I	CCNGG	5 cut(s)	39, 1611, 2094, 3017, 3018
MunI	CAATTG	3 cut(s)	1340, 1413, 2087
MvaI	CCWGG	2 cut(s)	39, 2094
MvnI	CGCG	2 cut(s)	520, 2173
MwoI	GCNNNNNNNGC	8 cut(s)	239, 536, 623, 866, 890, 1615, 2639, 3032
NciI	CCSGG	3 cut(s)	1611, 3017, 3018
NcoI	CCATGG	1 cut(s)	1114
NdeI	CATATG	1 cut(s)	3199
NheI	GCTAGC	1 cut(s)	880
NlaIV	GGNNCC	4 cut(s)	669, 1899, 1957, 2934
NmuCI	GTSAC	8 cut(s)	974, 1181, 1335, 2311, 2319, 2488, 2755, 3296
NsiI	ATGCAT	1 cut(s)	1976
OliI	CACNNNNGTG	2 cut(s)	1023, 2814
PagI	TCATGA	2 cut(s)	574, 2407
PceI	AGGCCT	1 cut(s)	2470
PciSI	GCTCTTC	4 cut(s)	197, 1070, 1599, 1704
PdmI	GAANNNNTTC	2 cut(s)	758, 2547
PflFI	GACNNNGTC	1 cut(s)	2777
PkrI	GCNGC	9 cut(s)	84, 294, 529, 745, 748, 871, 1049, 1347, 1797
PleI	GAGTC	4 cut(s)	1342, 1918, 2144, 2236
PpsI	GAGTC	4 cut(s)	1342, 1918, 2144, 2236
Ppu21I	YACGTR	1 cut(s)	2816
PshAI	GACNNNNGTC	1 cut(s)	2067
PshBI	ATTAAT	1 cut(s)	1665
PsiI	TTATAA	1 cut(s)	2007
Psp124BI	GAGCTC	1 cut(s)	244
Psp6I	CCWGG	2 cut(s)	37, 2092
PspGI	CCWGG	2 cut(s)	37, 2092
PspN4I	GGNNCC	4 cut(s)	669, 1899, 1957, 2934
PspPI	GGNCC	4 cut(s)	1042, 1291, 2669, 3099
PstI	CTGCAG	2 cut(s)	87, 679
PstNI	CAGNNNCTG	1 cut(s)	2165
PsuI	RGATCY	4 cut(s)	646, 1897, 1955, 2932
PsyI	GACNNNGTC	1 cut(s)	2777
RsaI	GTAC	5 cut(s)	165, 592, 1658, 1985, 2457
RsaNI	GTAC	5 cut(s)	164, 591, 1657, 1984, 2456
RseI	CAYNNNNRTG	7 cut(s)	803, 1023, 1259, 1299, 2102, 2406, 2814
SacI	GAGCTC	1 cut(s)	244
SapI	GCTCTTC	4 cut(s)	197, 1070, 1599, 1704
SatI	GCNGC	9 cut(s)	83, 293, 528, 744, 747, 870, 1048, 1346, 1796
Sau96I	GGNCC	4 cut(s)	1042, 1291, 2669, 3099
ScaI	AGTACT	2 cut(s)	592, 1985
SchI	GAGTC	4 cut(s)	1343, 1918, 2145, 2237
ScrFI	CCNGG	5 cut(s)	39, 1611, 2094, 3017, 3018
SduI	GDGCHC	7 cut(s)	244, 489, 1065, 1365, 1433, 1611, 2751
SfaNI	GCATC	8 cut(s)	412, 1310, 1921, 1961, 2592, 2882, 3238, 3393
SfcI	CTRYAG	6 cut(s)	83, 364, 675, 1214, 1681, 2443
SinI	GGWCC	4 cut(s)	1042, 1291, 2669, 3099
SmaI	CCCGGG	1 cut(s)	3018
SmiMI	CAYNNNNRTG	7 cut(s)	803, 1023, 1259, 1299, 2102, 2406, 2814
SmlI	CTYRAG	4 cut(s)	533, 662, 861, 3159
SmoI	CTYRAG	4 cut(s)	533, 662, 861, 3159
SseBI	AGGCCT	1 cut(s)	2470
SsiI	CCGC	7 cut(s)	101, 518, 1045, 1371, 1795, 1831, 2171
SspI	AATATT	1 cut(s)	3078
SspMI	CTAG	6 cut(s)	567, 650, 881, 2306, 2706, 3012
SstI	GAGCTC	1 cut(s)	244
StuI	AGGCCT	1 cut(s)	2470
StyD4I	CCNGG	5 cut(s)	37, 1609, 2092, 3015, 3016
StyI	CCWWGG	3 cut(s)	1003, 1114, 3233
TaiI	ACGT	2 cut(s)	1843, 2818
TaqI	TCGA	9 cut(s)	845, 1949, 2129, 2268, 2721, 3128, 3135, 3281, 3332
TatI	WGTACW	4 cut(s)	163, 590, 1656, 1983
TauI	GCSGC	1 cut(s)	1798
TscAI	CASTG	3 cut(s)	454, 979, 1146
TseFI	GTSAC	8 cut(s)	974, 1181, 1335, 2311, 2319, 2488, 2755, 3296
TseI	GCWGC	8 cut(s)	82, 292, 527, 743, 746, 869, 1047, 1345
Tsp45I	GTSAC	8 cut(s)	974, 1181, 1335, 2311, 2319, 2488, 2755, 3296
TspGWI	ACGGA	3 cut(s)	38, 255, 1968
TspMI	CCCGGG	1 cut(s)	3016
TspRI	CASTG	3 cut(s)	454, 979, 1146
Tth111I	GACNNNGTC	1 cut(s)	2777
VpaK11BI	GGWCC	4 cut(s)	1042, 1291, 2669, 3099
VspI	ATTAAT	1 cut(s)	1665
XagI	CCTNNNNNAGG	1 cut(s)	675
XapI	RAATTY	6 cut(s)	43, 416, 1488, 3106, 3228, 3261
XmaI	CCCGGG	1 cut(s)	3016
XmnI	GAANNNNTTC	2 cut(s)	758, 2547
XspI	CTAG	6 cut(s)	567, 650, 881, 2306, 2706, 3012
ZrmI	AGTACT	2 cut(s)	592, 1985
Zsp2I	ATGCAT	1 cut(s)	1976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.