Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002006

Physical Location & Seq

Genomic Coordinates Reverse (-)

85946812 .. 85952241

Gene Structure 5430 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53994

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGAAATTGACCGATCTACACTGCTACAGATGTGTGGGAGGGCAGGTCGCCCACCTTTTGATGATACAGGAATGGTTATAATCATGACAAGAAGAGATACGGTTCACTTGTATGAGAATCTCTTGAATGGATGTGAGATGGTGGAATCACAATTGCTTTCATGTTTGACGGAGCATTTAACTGCAGAGATAGTTCAACTGACTGTCTCTGACATTACAAGGGCAATTGAATGGATGAAGTGCTCTTTCTTGTATGTGAGAATGAAGAAGAATCCCGGACACTATGCAGTTAGAAAAGTGATTTCCAATGATCGTATAGAAAAGCATATGCTAGAGGTCTGTGTACAGAAAGTTAATGAGTTGTCGCAGCATCAGATGATATGGACTGATGAAGATGGTTTTCTGTTGAAACCACTAGAACCTGGGAGGCTGATGACGAAGTACTACTTGAAATTTGACACAATGAAATACATTATTCAGACACATGCAAACTGCAGCTTGGAAGATGCGCTTCATGTGATATGCCGTGCTGAGGAAATTTCATGGATACAGCTCAGGCGCAATGAGAAAAAGCTTCTAAATGACATAAACACTGATAAAGATGGTCGACTTCGCTTTCACATTCTTGGTGATAAAGGGAAGCGAAAAAAGCGTATTCAAACCAGAGAAGAAAAGATATTTCTTTTGGCTAATGACTGCTTGACTGGTGATCCATCGGTTCATGATTTATCCCTTACCCAGGATATGAACTCCATATGCTCAAATGGCTGTAGAATTGCCAGATGCATGAAAGAATTTTTTATTTACCAAAAGAATTACAAAGGAGCCTTGAACTCGATGCTTTTGGCAAAGTCTATGTATCAGAAACTCTGGGATGACAGTCCATACTTGCTGAAACAATTACCAGGGATTGGAATGGTGACTGCGAAGGCACTACATTCGATGGGAGTTAAATCATTTGAGACACTAGCTGAGGCTGATCCTAGGAGAATTGAGATAGTCACTGGTCGAAAATACCCATATGGGAACCACATAAAAGAGTCTCTACTGTCTCTACCTCCAAATGTTGAGTTGAAAGTTGAGGAAACTGAATGCCGGGGGCAAGGGAAACTGAAGCTAGCGGTGACACTGACTAGGCTATCACAGACACTCCAATCAACAAAACGACATTATGCTGATATGATTGTAGGTTCAGAAGAAGATAACCTGGTTCTCTTTCATGAGAAAATAAGAGTTGATGAATTCTCGAGCCCCTATAGCGCAACAGTTCTCCTGTCAAATCCCCAACAAGGAAAGCTGACTGTTAAGGCTGATCTTATATTTGAAGAATACATTGGTATTGATCTAAACCAGGAGCTTATCTTAATGAAGAAAAGCAATTTAAGTGCAAATAACAAACGAGGAAAAAAAGCACCCTCTCTTCCTCTACCTGAGGAAGTATGTATCATAGAAGATGATATTTATGAAGGCCCAAGTGAAGTGCTTCCAAACTCGACGAAATCCAAAAGGGTAGATGGTCCCATGCCCAGTTTCAAGCTTCTAGATGAAGACTCTGAAGAAGATGAGGTTGCCAACAAAGTTCATGAAGATGAGATTGCTGCCAAATTTCAAACTGATGACAAAGTTGTGACACAACAAACAGTATTTGACCACATACGTGAAAAGGCAAAGAACTTCCCTGTCTTGGTGTCCTCAAATAGTGTGCTTCCTCCATCATCAGAGCCCTTGGAATTAGCAAGGAAACGTGCTCGTGAGAAGAAGCTTGGACCGGAAAGTGGAGTAGAGGTTCTGGAAGAATTAGAATGGAATAAAGTTCAAAGACGAACTGTGGTCAATCCATCTTCAGAACTTAAAGAAGCAGAACAACATCTTTCTAGTATCAAAAATCATCCAAATCCCAGAAGCTCAGCTGCCCTGAACGTCATGGATGGCAGAGGAGAAACAATATTCGAGCACATACGCACAAAAGCTAAGAATTTTCCGGTGATCAATAAACCAAATGTGGAGGAGGCTGAGTCTTTAATCCAGACAAAACAACGCCTATATAAGACTGAACCAGAGTTTAGCATGGATATTACTGCCGTGCTGAAAGGAAGAAAACCAAATGAGGTTATCAGAGATACTGAATGTGATGGGAGGTTGCTCTCCGGAAGCTCCTGCAACCCTCATGGAATATTGAATGCTTCTCCCGGAGGTTTAAGCAATGGAGCCAATCTCTCATCAAGTAACATGCCATCTTTCGATATCTCCATGTTCAAGAATCCGAAGCGACCTGCAGATCCAGCAAGCACTATGGAGAATACTAGGAAGAAACATCAACACTCTCCAATTGTACCACCAAGGCACTGCTCGTTGACAGCAGCTGGAAAATCCAGAGAAGTAGAAACATTTCTTGGGTTTGAGAGTGTGTTTTCCTTTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048285 GO:0051321 GO:0061982 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140013 GO:0140098 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HHH_5 Helicase_C PPR Sec63

Protein Analysis

807

Amino Acids

91.47

Weight (kDa)

7.3

Isoelectric Point (pI)

47.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_SNRNP200	PF23445	49 - 128	3.6e-13	Winged Helix-turn-helix domain
Sec63	PF02889	138 - 452	8.1e-48	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730
fragaria_vesca	FvH4_6g51100
malus_domestica	MD09G1029000.v1.1 MD09G1029100.v1.1
prunus_persica	Prupe.3G288900_v2.0.a1
pyrus_communis	pycom111g02300 pycom111g02310
rosa_chinensis	RchiOBHm_Chr2g0089321 RchiOBHm_Chr2g0172661 RchiOBHm_Chr2g0172671
rosa_laevigata	RLG00000022075 RLG00000022122 RLG00000022126
rosa_multiflora	Rmu_sc0002053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00079680 Rroxscaffold_2G00080200 Rroxscaffold_2G00080420
rosa_rugosa	Rorug01G0489000 Rorug01G0489100 Rorug02G0246000 Rorug02G0560500.1
rosa_samantha	Rh2AG637300 Rh2AG637400 Rh2AG637500 Rh2AG637900 Rh2BG650700 Rh2BG650800 Rh2BG650900 Rh2BG651500 Rh2CG045200 Rh2CG045300 Rh2CG610500 Rh2CG617200 Rh2CG617600 Rh2DG658400 Rh2DG664700 Rh2DG665400
rosa_wichuraiana	Rw2G052240 Rw2G052720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	80
Acc36I	ACCTGC	2 cut(s)	35, 2281
AccB7I	CCANNNNNTGG	1 cut(s)	911
AccI	GTMKAC	1 cut(s)	607
AccIII	TCCGGA	1 cut(s)	2147
AciI	CCGC	1 cut(s)	1121
AclWI	GGATC	3 cut(s)	704, 974, 2273
AcsI	RAATTY	6 cut(s)	452, 537, 794, 1241, 1604, 1975
AcuI	CTGAAG	3 cut(s)	1133, 1575, 1827
AfaI	GTAC	3 cut(s)	345, 443, 2334
AfiI	CCNNNNNNNGG	6 cut(s)	532, 739, 911, 1289, 1684, 1775
AjnI	CCWGG	5 cut(s)	421, 738, 904, 1206, 1350
AjuI	GAANNNNNNNTTGG	4 cut(s)	1317, 1349, 2376, 2408
AleI	CACNNNNGTG	1 cut(s)	1656
AloI	GAACNNNNNNTCC	2 cut(s)	1770, 1802
Alw21I	GWGCWC	3 cut(s)	245, 1750, 1956
Alw26I	GTCTC	4 cut(s)	211, 956, 1047, 1056
AlwI	GGATC	3 cut(s)	704, 974, 2273
AlwNI	CAGNNNCTG	1 cut(s)	2363
Ama87I	CYCGRG	1 cut(s)	1246
Aor13HI	TCCGGA	1 cut(s)	2147
AoxI	GGCC	1 cut(s)	1468
ApeKI	GCWGC	5 cut(s)	367, 495, 1598, 1910, 2360
ApoI	RAATTY	6 cut(s)	452, 537, 794, 1241, 1604, 1975
Asp700I	GAANNNNTTC	2 cut(s)	1482, 2388
AspA2I	CCTAGG	1 cut(s)	983
AspLEI	GCGC	3 cut(s)	511, 561, 1262
AspS9I	GGNCC	3 cut(s)	1469, 1517, 1766
AsuC2I	CCSGG	3 cut(s)	276, 1097, 2190
AsuHPI	GGTGA	5 cut(s)	641, 719, 931, 1135, 1996
AsuNHI	GCTAGC	1 cut(s)	1117
AvaI	CYCGRG	1 cut(s)	1246
AvaII	GGWCC	2 cut(s)	1517, 1766
AvrII	CCTAGG	1 cut(s)	983
AxyI	CCTNAGG	1 cut(s)	1431
BanII	GRGCYC	2 cut(s)	1253, 1725
BauI	CACGAG	1 cut(s)	1749
BbsI	GAAGAC	1 cut(s)	1554
Bbv12I	GWGCWC	3 cut(s)	245, 1750, 1956
BbvCI	CCTCAGC	2 cut(s)	531, 972
BbvI	GCAGC	5 cut(s)	379, 507, 1585, 1897, 2372
BceAI	ACGGC	2 cut(s)	510, 2066
BcgI	CGANNNNNNTGC	2 cut(s)	921, 955
BciT130I	CCWGG	5 cut(s)	423, 740, 906, 1208, 1352
BciVI	GTATCC	1 cut(s)	540
BclI	TGATCA	1 cut(s)	1986
BcnI	CCSGG	3 cut(s)	276, 1097, 2190
BcoDI	GTCTC	4 cut(s)	211, 956, 1047, 1056
BfaI	CTAG	9 cut(s)	332, 416, 968, 984, 1118, 1134, 1541, 1875, 2304
BfmI	CTRYAG	6 cut(s)	26, 183, 493, 769, 1255, 2274
BfuAI	ACCTGC	2 cut(s)	35, 2281
BfuI	GTATCC	1 cut(s)	540
BisI	GCNGC	5 cut(s)	368, 496, 1599, 1911, 2361
BlnI	CCTAGG	1 cut(s)	983
BlpI	GCTNAGC	1 cut(s)	1906
BlsI	GCNGC	5 cut(s)	369, 497, 1600, 1912, 2362
BmcAI	AGTACT	1 cut(s)	443
Bme1390I	CCNGG	8 cut(s)	276, 423, 740, 906, 1097, 1208, 1352, 2190
Bme18I	GGWCC	2 cut(s)	1517, 1766
BmeT110I	CYCGRG	1 cut(s)	1246
BmgT120I	GGNCC	3 cut(s)	1469, 1517, 1766
BmiI	GGNNCC	4 cut(s)	826, 1028, 1519, 2209
BmrFI	CCNGG	8 cut(s)	276, 423, 740, 906, 1097, 1208, 1352, 2190
BmrI	ACTGGG	1 cut(s)	1521
BmsI	GCATC	4 cut(s)	379, 496, 773, 828
BmtI	GCTAGC	1 cut(s)	1121
BmuI	ACTGGG	1 cut(s)	1521
BpiI	GAAGAC	1 cut(s)	1554
BplI	GAGNNNNNCTC	2 cut(s)	2199, 2231
Bpu10I	CCTNAGC	3 cut(s)	531, 554, 972
Bpu1102I	GCTNAGC	1 cut(s)	1906
BpuMI	CCSGG	3 cut(s)	276, 1097, 2190
BsaAI	YACGTR	1 cut(s)	1658
BsaJI	CCNNGG	7 cut(s)	422, 738, 905, 983, 1096, 1725, 2339
BsaWI	WCCGGW	3 cut(s)	1768, 1981, 2147
BsaXI	ACNNNNNCTCC	8 cut(s)	31, 61, 1134, 1164, 1770, 1800, 2000, 2030
Bsc4I	CCNNNNNNNGG	6 cut(s)	532, 739, 911, 1289, 1684, 1775
Bse1I	ACTGG	3 cut(s)	709, 1009, 1527
Bse21I	CCTNAGG	1 cut(s)	1431
Bse3DI	GCAATG	2 cut(s)	568, 2209
BseAI	TCCGGA	1 cut(s)	2147
BseBI	CCWGG	5 cut(s)	423, 740, 906, 1208, 1352
BseDI	CCNNGG	7 cut(s)	422, 738, 905, 983, 1096, 1725, 2339
BseGI	GGATG	5 cut(s)	137, 240, 880, 1888, 1933
BseLI	CCNNNNNNNGG	6 cut(s)	532, 739, 911, 1289, 1684, 1775
BseMI	GCAATG	2 cut(s)	568, 2209
BseMII	CTCAG	6 cut(s)	522, 568, 963, 1422, 1920, 2004
BseNI	ACTGG	3 cut(s)	709, 1009, 1527
BseRI	GAGGAG	2 cut(s)	1950, 2021
BseXI	GCAGC	5 cut(s)	379, 507, 1585, 1897, 2372
BshFI	GGCC	1 cut(s)	1470
BsiHKAI	GWGCWC	3 cut(s)	245, 1750, 1956
BsiHKCI	CYCGRG	1 cut(s)	1246
BsiSI	CCGG	6 cut(s)	276, 1096, 1769, 1982, 2148, 2190
BslFI	GGGAC	1 cut(s)	1503
BslI	CCNNNNNNNGG	6 cut(s)	532, 739, 911, 1289, 1684, 1775
BsmAI	GTCTC	4 cut(s)	211, 956, 1047, 1056
BsmFI	GGGAC	1 cut(s)	1503
BsmI	GAATGC	2 cut(s)	1097, 2185
BsnI	GGCC	1 cut(s)	1470
BsoBI	CYCGRG	1 cut(s)	1246
Bsp1286I	GDGCHC	5 cut(s)	245, 1253, 1725, 1750, 1956
Bsp13I	TCCGGA	1 cut(s)	2147
Bsp1407I	TGTACA	1 cut(s)	343
Bsp143I	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
Bsp1720I	GCTNAGC	1 cut(s)	1906
BspACI	CCGC	1 cut(s)	1121
BspANI	GGCC	1 cut(s)	1470
BspCNI	CTCAG	6 cut(s)	523, 567, 964, 1423, 1919, 2005
BspEI	TCCGGA	1 cut(s)	2147
BspHI	TCATGA	4 cut(s)	84, 721, 1219, 1582
BspLI	GGNNCC	4 cut(s)	826, 1028, 1519, 2209
BspMAI	CTGCAG	3 cut(s)	187, 497, 2278
BspMI	ACCTGC	2 cut(s)	35, 2281
BspOI	GCTAGC	1 cut(s)	1121
BspPI	GGATC	3 cut(s)	704, 974, 2273
BsrDI	GCAATG	2 cut(s)	568, 2209
BsrGI	TGTACA	1 cut(s)	343
BsrI	ACTGG	3 cut(s)	709, 1009, 1527
BssECI	CCNNGG	7 cut(s)	422, 738, 905, 983, 1096, 1725, 2339
BssMI	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
BssSI	CACGAG	1 cut(s)	1749
BssT1I	CCWWGG	3 cut(s)	983, 1725, 2339
Bst2BI	CACGAG	1 cut(s)	1749
Bst2UI	CCWGG	5 cut(s)	423, 740, 906, 1208, 1352
Bst4CI	ACNGT	8 cut(s)	103, 205, 881, 1050, 1267, 1303, 1642, 1828
Bst6I	CTCTTC	2 cut(s)	88, 1425
BstAUI	TGTACA	1 cut(s)	343
BstBAI	YACGTR	1 cut(s)	1658
BstC8I	GCNNGC	2 cut(s)	1119, 2287
BstDEI	CTNAG	7 cut(s)	531, 554, 972, 1431, 1906, 1971, 2013
BstENI	CCTNNNNNAGG	1 cut(s)	737
BstF5I	GGATG	5 cut(s)	137, 240, 880, 1888, 1933
BstHHI	GCGC	3 cut(s)	511, 561, 1262
BstKTI	GATC	8 cut(s)	17, 313, 712, 982, 1315, 1345, 1989, 2281
BstMAI	GTCTC	4 cut(s)	211, 956, 1047, 1056
BstMBI	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
BstMWI	GCNNNNNNNGC	4 cut(s)	649, 765, 1257, 2282
BstNI	CCWGG	5 cut(s)	423, 740, 906, 1208, 1352
BstNSI	RCATGY	2 cut(s)	488, 2233
BstSCI	CCNGG	8 cut(s)	274, 421, 738, 904, 1095, 1206, 1350, 2188
BstSFI	CTRYAG	6 cut(s)	26, 183, 493, 769, 1255, 2274
BstV1I	GCAGC	5 cut(s)	379, 507, 1585, 1897, 2372
BstV2I	GAAGAC	1 cut(s)	1554
BstX2I	RGATCY	1 cut(s)	2278
BstYI	RGATCY	1 cut(s)	2278
Bsu36I	CCTNAGG	1 cut(s)	1431
BsuI	GTATCC	1 cut(s)	540
BsuRI	GGCC	1 cut(s)	1470
BtsCI	GGATG	5 cut(s)	137, 240, 880, 1888, 1933
BtsI	GCAGTG	2 cut(s)	20, 2344
BtsIMutI	CAGTG	5 cut(s)	20, 591, 1002, 1127, 2344
BveI	ACCTGC	2 cut(s)	35, 2281
Cac8I	GCNNGC	2 cut(s)	1119, 2287
CaiI	CAGNNNCTG	1 cut(s)	2363
CciI	TCATGA	4 cut(s)	84, 721, 1219, 1582
CfoI	GCGC	3 cut(s)	511, 561, 1262
Cfr13I	GGNCC	3 cut(s)	1469, 1517, 1766
CsiI	ACCWGGT	1 cut(s)	1206
Csp6I	GTAC	3 cut(s)	344, 442, 2333
CviQI	GTAC	3 cut(s)	344, 442, 2333
DdeI	CTNAG	7 cut(s)	531, 554, 972, 1431, 1906, 1971, 2013
DpnI	GATC	8 cut(s)	16, 312, 711, 981, 1314, 1344, 1988, 2280
DpnII	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
Eam1104I	CTCTTC	2 cut(s)	88, 1425
EarI	CTCTTC	2 cut(s)	88, 1425
Eco130I	CCWWGG	3 cut(s)	983, 1725, 2339
Eco24I	GRGCYC	2 cut(s)	1253, 1725
Eco32I	GATATC	1 cut(s)	2245
Eco47I	GGWCC	2 cut(s)	1517, 1766
Eco57I	CTGAAG	3 cut(s)	1133, 1575, 1827
Eco81I	CCTNAGG	1 cut(s)	1431
Eco88I	CYCGRG	1 cut(s)	1246
EcoNI	CCTNNNNNAGG	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	1241
EcoRII	CCWGG	5 cut(s)	421, 738, 904, 1206, 1350
EcoRV	GATATC	1 cut(s)	2245
EcoT14I	CCWWGG	3 cut(s)	983, 1725, 2339
EcoT22I	ATGCAT	1 cut(s)	788
EcoT38I	GRGCYC	2 cut(s)	1253, 1725
ErhI	CCWWGG	3 cut(s)	983, 1725, 2339
FalI	AAGNNNNNCTT	4 cut(s)	431, 463, 495, 527
FaqI	GGGAC	1 cut(s)	1503
FauNDI	CATATG	3 cut(s)	327, 755, 1021
FbaI	TGATCA	1 cut(s)	1986
FblI	GTMKAC	1 cut(s)	607
Fnu4HI	GCNGC	5 cut(s)	368, 496, 1599, 1911, 2361
FokI	GGATG	5 cut(s)	144, 247, 887, 1875, 1940
FriOI	GRGCYC	2 cut(s)	1253, 1725
Fsp4HI	GCNGC	5 cut(s)	368, 496, 1599, 1911, 2361
FspBI	CTAG	9 cut(s)	332, 416, 968, 984, 1118, 1134, 1541, 1875, 2304
GlaI	GCGC	3 cut(s)	510, 560, 1261
GluI	GCNGC	5 cut(s)	368, 496, 1599, 1911, 2361
HaeIII	GGCC	1 cut(s)	1470
HapII	CCGG	6 cut(s)	276, 1096, 1769, 1982, 2148, 2190
HhaI	GCGC	3 cut(s)	511, 561, 1262
Hin6I	GCGC	3 cut(s)	509, 559, 1260
HinP1I	GCGC	3 cut(s)	509, 559, 1260
HincII	GTYRAC	2 cut(s)	608, 2355
HindII	GTYRAC	2 cut(s)	608, 2355
HindIII	AAGCTT	3 cut(s)	572, 1535, 1760
HinfI	GANTC	7 cut(s)	118, 146, 271, 1040, 1550, 2015, 2260
HpaII	CCGG	6 cut(s)	276, 1096, 1769, 1982, 2148, 2190
HphI	GGTGA	5 cut(s)	641, 719, 931, 1135, 1996
Hpy166II	GTNNAC	4 cut(s)	106, 344, 608, 2355
Hpy8I	GTNNAC	4 cut(s)	106, 344, 608, 2355
Hpy99I	CGWCG	1 cut(s)	1498
HpyAV	CCTTC	2 cut(s)	922, 1460
HpyCH4III	ACNGT	8 cut(s)	103, 205, 881, 1050, 1267, 1303, 1642, 1828
HpyCH4IV	ACGT	3 cut(s)	1657, 1744, 1920
HpyCH4V	TGCA	8 cut(s)	185, 287, 488, 495, 786, 1388, 2160, 2276
HpyF10VI	GCNNNNNNNGC	4 cut(s)	649, 765, 1257, 2282
HpyF3I	CTNAG	7 cut(s)	531, 554, 972, 1431, 1906, 1971, 2013
HpySE526I	ACGT	3 cut(s)	1657, 1744, 1920
HspAI	GCGC	3 cut(s)	509, 559, 1260
Kpn2I	TCCGGA	1 cut(s)	2147
Ksp22I	TGATCA	1 cut(s)	1986
Kzo9I	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
LmnI	GCTCC	5 cut(s)	172, 824, 1354, 2159, 2207
Lsp1109I	GCAGC	5 cut(s)	379, 507, 1585, 1897, 2372
LweI	GCATC	4 cut(s)	379, 496, 773, 828
MabI	ACCWGGT	1 cut(s)	1206
MaeI	CTAG	9 cut(s)	332, 416, 968, 984, 1118, 1134, 1541, 1875, 2304
MaeII	ACGT	3 cut(s)	1657, 1744, 1920
MaeIII	GTNAC	5 cut(s)	919, 1000, 1123, 1627, 2225
MalI	GATC	8 cut(s)	16, 312, 711, 981, 1314, 1344, 1988, 2280
MboI	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
MfeI	CAATTG	3 cut(s)	152, 225, 2328
MflI	RGATCY	1 cut(s)	2278
MhlI	GDGCHC	5 cut(s)	245, 1253, 1725, 1750, 1956
MlyI	GAGTC	3 cut(s)	1049, 1544, 2024
Mph1103I	ATGCAT	1 cut(s)	788
MroI	TCCGGA	1 cut(s)	2147
MroXI	GAANNNNTTC	2 cut(s)	1482, 2388
MseI	TTAA	9 cut(s)	179, 354, 951, 1305, 1364, 1382, 1851, 2021, 2198
MslI	CAYNNNNRTG	3 cut(s)	111, 1587, 1656
MspA1I	CMGCKG	2 cut(s)	1910, 2363
MspI	CCGG	6 cut(s)	276, 1096, 1769, 1982, 2148, 2190
MspR9I	CCNGG	8 cut(s)	276, 423, 740, 906, 1097, 1208, 1352, 2190
MunI	CAATTG	3 cut(s)	152, 225, 2328
Mva1269I	GAATGC	2 cut(s)	1097, 2185
MvaI	CCWGG	5 cut(s)	423, 740, 906, 1208, 1352
MwoI	GCNNNNNNNGC	4 cut(s)	649, 765, 1257, 2282
NciI	CCSGG	3 cut(s)	276, 1097, 2190
NdeI	CATATG	3 cut(s)	327, 755, 1021
NdeII	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
NheI	GCTAGC	1 cut(s)	1117
NlaIV	GGNNCC	4 cut(s)	826, 1028, 1519, 2209
NmuCI	GTSAC	4 cut(s)	919, 1000, 1123, 1627
NsiI	ATGCAT	1 cut(s)	788
NspI	RCATGY	2 cut(s)	488, 2233
OliI	CACNNNNGTG	1 cut(s)	1656
PaeR7I	CTCGAG	1 cut(s)	1246
PagI	TCATGA	4 cut(s)	84, 721, 1219, 1582
PctI	GAATGC	2 cut(s)	1097, 2185
PdmI	GAANNNNTTC	2 cut(s)	1482, 2388
PfeI	GAWTC	4 cut(s)	118, 146, 271, 2260
PflMI	CCANNNNNTGG	1 cut(s)	911
PfoI	TCCNGGA	2 cut(s)	274, 2188
PkrI	GCNGC	5 cut(s)	369, 497, 1600, 1912, 2362
PleI	GAGTC	3 cut(s)	1048, 1544, 2023
PpsI	GAGTC	3 cut(s)	1048, 1544, 2023
Ppu21I	YACGTR	1 cut(s)	1658
PsiI	TTATAA	1 cut(s)	80
Psp6I	CCWGG	5 cut(s)	421, 738, 904, 1206, 1350
PspGI	CCWGG	5 cut(s)	421, 738, 904, 1206, 1350
PspN4I	GGNNCC	4 cut(s)	826, 1028, 1519, 2209
PspPI	GGNCC	3 cut(s)	1469, 1517, 1766
PstI	CTGCAG	3 cut(s)	187, 497, 2278
PstNI	CAGNNNCTG	1 cut(s)	2363
PsuI	RGATCY	1 cut(s)	2278
PvuII	CAGCTG	2 cut(s)	1910, 2363
RsaI	GTAC	3 cut(s)	345, 443, 2334
RsaNI	GTAC	3 cut(s)	344, 442, 2333
RseI	CAYNNNNRTG	3 cut(s)	111, 1587, 1656
SalI	GTCGAC	1 cut(s)	606
SaqAI	TTAA	9 cut(s)	179, 354, 951, 1305, 1364, 1382, 1851, 2021, 2198
SatI	GCNGC	5 cut(s)	368, 496, 1599, 1911, 2361
Sau3AI	GATC	8 cut(s)	14, 310, 709, 979, 1312, 1342, 1986, 2278
Sau96I	GGNCC	3 cut(s)	1469, 1517, 1766
ScaI	AGTACT	1 cut(s)	443
SchI	GAGTC	3 cut(s)	1049, 1544, 2024
ScrFI	CCNGG	8 cut(s)	276, 423, 740, 906, 1097, 1208, 1352, 2190
SduI	GDGCHC	5 cut(s)	245, 1253, 1725, 1750, 1956
SexAI	ACCWGGT	1 cut(s)	1206
SfaNI	GCATC	4 cut(s)	379, 496, 773, 828
SfcI	CTRYAG	6 cut(s)	26, 183, 493, 769, 1255, 2274
Sfr274I	CTCGAG	1 cut(s)	1246
SinI	GGWCC	2 cut(s)	1517, 1766
SlaI	CTCGAG	1 cut(s)	1246
SmiMI	CAYNNNNRTG	3 cut(s)	111, 1587, 1656
SmlI	CTYRAG	1 cut(s)	1246
SmoI	CTYRAG	1 cut(s)	1246
SsiI	CCGC	1 cut(s)	1121
SspI	AATATT	2 cut(s)	1947, 2175
SspMI	CTAG	9 cut(s)	332, 416, 968, 984, 1118, 1134, 1541, 1875, 2304
StyD4I	CCNGG	8 cut(s)	274, 421, 738, 904, 1095, 1206, 1350, 2188
StyI	CCWWGG	3 cut(s)	983, 1725, 2339
TaaI	ACNGT	8 cut(s)	103, 205, 881, 1050, 1267, 1303, 1642, 1828
TaiI	ACGT	3 cut(s)	1660, 1747, 1923
TaqI	TCGA	8 cut(s)	607, 836, 941, 1009, 1247, 1493, 1950, 2241
TaqII	GACCGA	1 cut(s)	27
TatI	WGTACW	2 cut(s)	343, 441
TfiI	GAWTC	4 cut(s)	118, 146, 271, 2260
Tru1I	TTAA	9 cut(s)	179, 354, 951, 1305, 1364, 1382, 1851, 2021, 2198
Tru9I	TTAA	9 cut(s)	179, 354, 951, 1305, 1364, 1382, 1851, 2021, 2198
TscAI	CASTG	5 cut(s)	27, 598, 1009, 1134, 2351
TseFI	GTSAC	4 cut(s)	919, 1000, 1123, 1627
TseI	GCWGC	5 cut(s)	367, 495, 1598, 1910, 2360
Tsp45I	GTSAC	4 cut(s)	919, 1000, 1123, 1627
TspGWI	ACGGA	1 cut(s)	185
TspRI	CASTG	5 cut(s)	27, 598, 1009, 1134, 2351
Van91I	CCANNNNNTGG	1 cut(s)	911
VpaK11BI	GGWCC	2 cut(s)	1517, 1766
XagI	CCTNNNNNAGG	1 cut(s)	737
XapI	RAATTY	6 cut(s)	452, 537, 794, 1241, 1604, 1975
XbaI	TCTAGA	1 cut(s)	1540
XceI	RCATGY	2 cut(s)	488, 2233
XhoI	CTCGAG	1 cut(s)	1246
XmaJI	CCTAGG	1 cut(s)	983
XmiI	GTMKAC	1 cut(s)	607
XmnI	GAANNNNTTC	2 cut(s)	1482, 2388
XspI	CTAG	9 cut(s)	332, 416, 968, 984, 1118, 1134, 1541, 1875, 2304
ZrmI	AGTACT	1 cut(s)	443
Zsp2I	ATGCAT	1 cut(s)	788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.