Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0002006

Physical Location & Seq

Genomic Coordinates Forward (+)

1376193 .. 1381572

Gene Structure 5380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g02310.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGAGGCCTGTAAAGTTGACAACAAAAGTTTTTGGCTACACCCCCGCAAAAAATGATTTCCTATTCGAAAAGCGCCTTCAAAACTACATTTTCGATGTCCTCATGCAATATTCAAGAGGGAAATCTGCTTTGGTTTTCTGTTCAACTAGAAAAGGTGCACAAGAAGCAGCACAGAGGCTCACACAGACAGTCATGGCCTTTGGCCACTCAAATCCGTTCATTAAAAGCAAAGAACAGCAAGAGAGGCTAAGGGAAGCTTCATTTTCATGCGGTGACAAACAAATGCAATCTTATATTCCTTACGGTGTTGGTTATCACAACGGTGGCCTTTCCATGAAGGATCGTAACCTCATTGAAAGTCTTTTTCTTAAGGGCGATATTCAAGTTTTGTGCACAACAAATACCCTTGCTCATGGAATCAACCTACCAGCACATACAGTAGTCATAAAATCAACACAGCACTTCAACAAAGAAAAAGGTCTCTACATGGAATATGACCGGTCTACAATACTACAGATGTGTGGGAGAGCTGGCCGACCACCATTTGATGATACAGGAATGGTTGTAATCATGACAAGAAAAGACACGGTTCACTTGTACGAAAATCTATTGAATGGATGCGAGATGGTGGAATCACAATTGCTTTCATGTTTGACGGAGCATTTAACCGCTGAGATAGTTCAATTGACTGTCTCTGATATTCCAAGGGCAATTGAATGGATGAAGTGCTCTTTCTTGTACGTGAGAATGAAGAAGAACCCTGTGCACTATTCAGTTAGAAAAGTGATTTCTAAAGACCGTATAGAAAAGCATATGCAAGAGGTCTGTCTGCAGAAAGTTAATGAGTTGTCACAGCATCAGATGATATGGACGGATAAAGATGGTTTTCTTTTGAAACCACTAGAACCTGGGAGGCTGATGACAAAATACTACTTGAAATTTGACACAATGAAACACATTATGAAGACACCTGTAAACTGCAGTTTGGAAGATGCTCTTCATGTTATATGTCGAGCTGAGGAAATTTCATGGATACAGCTCAGACGCAGTGAGAAGAAGCTTTTAAATGACATAAATGCTGATAAAGATGGCCGACTTCGCTTTCATGTCCTTGGTGACAAAGGGAAGCGACAAAAGCGTATTCAGACCAGAGAAGAAAAAACATTTGTTCTGGCTAATGACTGCTTGACGGGTGATCCTTCGGTTCATGATCTATCCCTTACCCAGGATATGAACTCTATATGCTCAAATGGCTGTAGAATTGCAAGGTGTATGAAAGAATTTTTTATTTACCAAAAGAACTACAAGGGAGCCTTAAACTCGATGCTTCTGGCAAAGTCGTTATATCAAAAACTCTGGGATGACAGCCCATACCTGCTGAAACAATTACCCGGGATTGGAATGGTGACTGCAAAGGCACTACATTCAATGGGAGTCAGATTGTTTGACACACTGGCTGAGGCTGATCCCAGGAGAATAGAGATAGTCACTGGTCGAAAATACCCATTTGGAAACCATTTGAAAGAGTCTCTACATTCACTACCTCCAAAAGTTGAGATGAAGGTCGAAGAAAATGAGTGTCAGAGGCAAGGGAAACTGAAGCTTGTGGTAACATTGACTAGGCTATCAGCGACACTCCAACCAACCAAACGACATTATGCTGATATGATTATTGGTTCAGAAGAAGATAACCTGATTGTCTTTCATGAGAAAATAAGAGTGGAGGAATTCTCCAGCCCCTATAGCACAACAATTCTTCTGTCGAATCCCCAACAAGGAAAGCTCACTGTAAAGGCTGATCTTGTTTTTGAAGAATACATCGGCATTGATCTCTCCCAGAAACTTGTATTAATGAAGGAAAGCAATAACAAGCGGGGAAAAAAGCCGCCTTCTTGTCCTCCACCTAAGGAAGTATGTGTCATAGAGGATGATGCTGAAACTATATGTCAGGCTCCAACGAAAGAGCATCCCAAATCGACCAAATCCAAAAGGGTAGATGGTTCCATGCCGAGTTTCAACCTCCTGGATGATGAGTTTGAAGAAGACGAGGTTGCTGCCAACATTCGAGAAGATGAGGTCGCTGCCAAAGCTGAAGAGGAGGAATGCAAAATCATCACACACCAAACGGTATTTGATCACATACGTGAAAAGGCAAAGAACTTCCCCGTCTTGGTGGCATCAAATGGTGCGCATTCTGCATCCACAGAACCCTTGGTTTTGACAAGAAAACGTGCTCGTGAGAAGCAGCTTGAACCCCATAGAGAATTCGAGGTTCTGGAAGAGTTAGAATGGAATAAAATTCCAAGGCGGACTGCGGTGAATCCATCTTCAGAACCCAAAGAGGCAGAACAAAATCAACATAGCATGAACAATCTCCCTACTCCCCGAAGCTCAGCTACCATGAACCTGATGGATGACAGAGAAGCTGGTCTTCCTCTTGAACCTGAAGATGGAACTTTCAAAACTTCAAGAGAAGAAACAATATTTGAGCACATTCGAACAAAAGCCAAGAATTTTCCGGTGATCAATAAATCAAAGGTGGTGGATTCTGGTTATTCAACCATGAAAGAACATCTTTCCAAGAGTCGCCTTGAATTGAGTATGGATACGACTGGCACGCTGAAAGGAACAACAGAGTCGAACAAAGTTCTGAGAGACACTGCATTCGTCTCAGATTCGGGAGCCAGAAAAGCATCAAATGTGTCTCCTAGAGGTTTAGGCGACGGTGCTGCAAAAATGCTGTCTTTTGATATCTCCATGTTGAAGAATACGAAGAAATCACCGGAACCAGGCAGTGCTGGCAAGAGGAAACATGAGCTTTCTCCGCTTGTACCACAAAGGCAGTGGTGCTCGTTGACATCTGCTGGCAAACCCAGGGAAGTAGACACATTTCTTGGATTTGAGAGTATCTTTTCGTTCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048285 GO:0051321 GO:0061982 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140013 GO:0140098 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HHH_5 Helicase_C PPR Sec63

Protein Analysis

975

Amino Acids

110.72

Weight (kDa)

8.79

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730
fragaria_vesca	FvH4_6g51100
malus_domestica	MD09G1029000.v1.1 MD09G1029100.v1.1
prunus_persica	Prupe.3G288900_v2.0.a1
pyrus_communis	pycom111g02300 pycom111g02310
rosa_chinensis	RchiOBHm_Chr2g0089321 RchiOBHm_Chr2g0172661 RchiOBHm_Chr2g0172671
rosa_laevigata	RLG00000022075 RLG00000022122 RLG00000022126
rosa_multiflora	Rmu_sc0002053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00079680 Rroxscaffold_2G00080200 Rroxscaffold_2G00080420
rosa_rugosa	Rorug01G0489000 Rorug01G0489100 Rorug02G0246000 Rorug02G0560500.1
rosa_samantha	Rh2AG637300 Rh2AG637400 Rh2AG637500 Rh2AG637900 Rh2BG650700 Rh2BG650800 Rh2BG650900 Rh2BG651500 Rh2CG045200 Rh2CG045300 Rh2CG610500 Rh2CG617200 Rh2CG617600 Rh2DG658400 Rh2DG664700 Rh2DG665400
rosa_wichuraiana	Rw2G052240 Rw2G052720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2190
Acc36I	ACCTGC	1 cut(s)	1383
AccI	GTMKAC	2 cut(s)	503, 2883
AciI	CCGC	8 cut(s)	45, 270, 669, 1873, 1886, 2308, 2315, 2825
AclWI	GGATC	3 cut(s)	348, 1190, 1460
AcoI	YGGCCR	3 cut(s)	202, 532, 1090
AcsI	RAATTY	7 cut(s)	938, 1023, 1280, 1727, 2264, 2298, 2512
AcuI	CTGAAG	4 cut(s)	1619, 2112, 2313, 2466
AfaI	GTAC	3 cut(s)	599, 740, 2832
AfiI	CCNNNNNNNGG	6 cut(s)	1225, 1397, 1775, 2170, 2450, 2789
AflII	CTTAAG	1 cut(s)	368
AgeI	ACCGGT	1 cut(s)	498
AjnI	CCWGG	6 cut(s)	907, 1224, 1469, 2022, 2788, 2873
AjuI	GAANNNNNNNTTGG	2 cut(s)	113, 145
AleI	CACNNNNGTG	2 cut(s)	321, 2142
Alw21I	GWGCWC	7 cut(s)	160, 395, 731, 768, 2236, 2493, 2852
Alw26I	GTCTC	6 cut(s)	485, 697, 1533, 2649, 2674, 2709
Alw44I	GTGCAC	3 cut(s)	156, 391, 764
AlwI	GGATC	3 cut(s)	348, 1190, 1460
Ama87I	CYCGRG	1 cut(s)	1391
AoxI	GGCC	6 cut(s)	5, 195, 202, 325, 532, 1090
ApaLI	GTGCAC	3 cut(s)	156, 391, 764
ApeKI	GCWGC	5 cut(s)	167, 2054, 2081, 2245, 2729
ApoI	RAATTY	7 cut(s)	938, 1023, 1280, 1727, 2264, 2298, 2512
ArsI	GACNNNNNNTTYG	4 cut(s)	2648, 2680, 2726, 2758
AseI	ATTAAT	1 cut(s)	1850
AsiGI	ACCGGT	1 cut(s)	498
AspLEI	GCGC	2 cut(s)	75, 2191
AsuC2I	CCSGG	2 cut(s)	1392, 1393
AsuHPI	GGTGA	7 cut(s)	284, 1127, 1205, 1417, 2329, 2533, 2772
AsuII	TTCGAA	2 cut(s)	66, 2497
AvaI	CYCGRG	1 cut(s)	1391
AxyI	CCTNAGG	1 cut(s)	1905
BaeGI	GKGCMC	3 cut(s)	160, 395, 768
BalI	TGGCCA	1 cut(s)	204
BarI	GAAGNNNNNNTAC	2 cut(s)	2380, 2412
BauI	CACGAG	1 cut(s)	2235
BbsI	GAAGAC	3 cut(s)	971, 2049, 2423
Bbv12I	GWGCWC	7 cut(s)	160, 395, 731, 768, 2236, 2493, 2852
BbvCI	CCTCAGC	2 cut(s)	1017, 1458
BbvI	GCAGC	5 cut(s)	179, 2041, 2068, 2257, 2716
BccI	CCATC	7 cut(s)	619, 875, 1082, 1991, 2332, 2404, 2444
BcgI	CGANNNNNNTGC	4 cut(s)	2036, 2070, 2711, 2745
BciT130I	CCWGG	6 cut(s)	909, 1226, 1471, 2024, 2790, 2875
BciVI	GTATCC	2 cut(s)	1026, 2599
BclI	TGATCA	2 cut(s)	2134, 2523
BcnI	CCSGG	2 cut(s)	1392, 1393
BcoDI	GTCTC	6 cut(s)	485, 697, 1533, 2649, 2674, 2709
BfaI	CTAG	4 cut(s)	147, 902, 1620, 2709
BfmI	CTRYAG	5 cut(s)	512, 830, 979, 1255, 1741
BfoI	RGCGCY	1 cut(s)	76
BfrI	CTTAAG	1 cut(s)	368
BfuAI	ACCTGC	1 cut(s)	1383
BfuI	GTATCC	2 cut(s)	1026, 2599
BisI	GCNGC	6 cut(s)	168, 1886, 2055, 2082, 2246, 2730
BlpI	GCTNAGC	1 cut(s)	2392
BlsI	GCNGC	6 cut(s)	169, 1887, 2056, 2083, 2247, 2731
Bme1390I	CCNGG	8 cut(s)	909, 1226, 1392, 1393, 1471, 2024, 2790, 2875
BmeT110I	CYCGRG	1 cut(s)	1391
BmiI	GGNNCC	5 cut(s)	1312, 1953, 2002, 2683, 2787
BmrFI	CCNGG	8 cut(s)	909, 1226, 1392, 1393, 1471, 2024, 2790, 2875
BmsI	GCATC	9 cut(s)	608, 865, 982, 1314, 1921, 1975, 2186, 2207, 2702
BpiI	GAAGAC	3 cut(s)	971, 2049, 2423
BplI	GAGNNNNNCTC	2 cut(s)	1715, 1747
BpmI	CTGGAG	1 cut(s)	1717
Bpu10I	CCTNAGC	3 cut(s)	248, 1017, 1458
Bpu1102I	GCTNAGC	1 cut(s)	2392
Bpu14I	TTCGAA	2 cut(s)	66, 2497
BpuMI	CCSGG	2 cut(s)	1392, 1393
BsaAI	YACGTR	2 cut(s)	742, 2144
BsaI	GGTCTC	1 cut(s)	485
BsaWI	WCCGGW	3 cut(s)	498, 2518, 2782
Bsc4I	CCNNNNNNNGG	6 cut(s)	1225, 1397, 1775, 2170, 2450, 2789
Bse118I	RCCGGY	1 cut(s)	498
Bse1I	ACTGG	3 cut(s)	1458, 1495, 2617
Bse21I	CCTNAGG	1 cut(s)	1905
BseBI	CCWGG	6 cut(s)	909, 1226, 1471, 2024, 2790, 2875
BseGI	GGATG	8 cut(s)	623, 726, 1366, 1933, 1966, 2032, 2198, 2419
BseLI	CCNNNNNNNGG	6 cut(s)	1225, 1397, 1775, 2170, 2450, 2789
BseMII	CTCAG	7 cut(s)	663, 1008, 1054, 1449, 2406, 2642, 2685
BseNI	ACTGG	3 cut(s)	1458, 1495, 2617
BseRI	GAGGAG	1 cut(s)	2111
BseSI	GKGCMC	3 cut(s)	160, 395, 768
BseXI	GCAGC	5 cut(s)	179, 2041, 2068, 2257, 2716
BshFI	GGCC	6 cut(s)	7, 197, 204, 327, 534, 1092
BshTI	ACCGGT	1 cut(s)	498
BsiHKAI	GWGCWC	7 cut(s)	160, 395, 731, 768, 2236, 2493, 2852
BsiHKCI	CYCGRG	1 cut(s)	1391
BsiSI	CCGG	4 cut(s)	499, 1392, 2519, 2783
BslI	CCNNNNNNNGG	6 cut(s)	1225, 1397, 1775, 2170, 2450, 2789
BsmAI	GTCTC	6 cut(s)	485, 697, 1533, 2649, 2674, 2709
BsmBI	CGTCTC	1 cut(s)	2674
BsmI	GAATGC	3 cut(s)	2108, 2191, 2663
BsnI	GGCC	6 cut(s)	7, 197, 204, 327, 534, 1092
Bso31I	GGTCTC	1 cut(s)	485
BsoBI	CYCGRG	1 cut(s)	1391
Bsp119I	TTCGAA	2 cut(s)	66, 2497
Bsp1286I	GDGCHC	7 cut(s)	160, 395, 731, 768, 2236, 2493, 2852
Bsp143I	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
Bsp1720I	GCTNAGC	1 cut(s)	2392
BspACI	CCGC	8 cut(s)	45, 270, 669, 1873, 1886, 2308, 2315, 2825
BspANI	GGCC	6 cut(s)	7, 197, 204, 327, 534, 1092
BspCNI	CTCAG	7 cut(s)	664, 1009, 1053, 1450, 2405, 2643, 2684
BspHI	TCATGA	3 cut(s)	570, 1207, 1705
BspLI	GGNNCC	5 cut(s)	1312, 1953, 2002, 2683, 2787
BspMAI	CTGCAG	2 cut(s)	834, 983
BspMI	ACCTGC	1 cut(s)	1383
BspPI	GGATC	3 cut(s)	348, 1190, 1460
BspQI	GCTCTTC	1 cut(s)	1002
BspT104I	TTCGAA	2 cut(s)	66, 2497
BspTI	CTTAAG	1 cut(s)	368
BspTNI	GGTCTC	1 cut(s)	485
BsrFI	RCCGGY	1 cut(s)	498
BsrI	ACTGG	3 cut(s)	1458, 1495, 2617
BssAI	RCCGGY	1 cut(s)	498
BssMI	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
BssSI	CACGAG	1 cut(s)	2235
BssT1I	CCWWGG	4 cut(s)	704, 1111, 2211, 2303
Bst2BI	CACGAG	1 cut(s)	2235
Bst2UI	CCWGG	6 cut(s)	909, 1226, 1471, 2024, 2790, 2875
Bst6I	CTCTTC	3 cut(s)	1002, 2088, 2274
BstAFI	CTTAAG	1 cut(s)	368
BstBAI	YACGTR	2 cut(s)	742, 2144
BstBI	TTCGAA	2 cut(s)	66, 2497
BstC8I	GCNNGC	4 cut(s)	532, 2618, 2800, 2866
BstDEI	CTNAG	9 cut(s)	248, 672, 1017, 1040, 1458, 1905, 2392, 2651, 2671
BstENI	CCTNNNNNAGG	1 cut(s)	1223
BstF5I	GGATG	8 cut(s)	623, 726, 1366, 1933, 1966, 2032, 2198, 2419
BstH2I	RGCGCY	1 cut(s)	76
BstHHI	GCGC	2 cut(s)	75, 2191
BstKTI	GATC	8 cut(s)	343, 1198, 1213, 1468, 1801, 1831, 2137, 2526
BstMAI	GTCTC	6 cut(s)	485, 697, 1533, 2649, 2674, 2709
BstMBI	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
BstNI	CCWGG	6 cut(s)	909, 1226, 1471, 2024, 2790, 2875
BstSCI	CCNGG	8 cut(s)	907, 1224, 1390, 1391, 1469, 2022, 2788, 2873
BstSFI	CTRYAG	5 cut(s)	512, 830, 979, 1255, 1741
BstSLI	GKGCMC	3 cut(s)	160, 395, 768
BstV1I	GCAGC	5 cut(s)	179, 2041, 2068, 2257, 2716
BstV2I	GAAGAC	3 cut(s)	971, 2049, 2423
Bsu36I	CCTNAGG	1 cut(s)	1905
BsuI	GTATCC	2 cut(s)	1026, 2599
BsuRI	GGCC	6 cut(s)	7, 197, 204, 327, 534, 1092
BtsCI	GGATG	8 cut(s)	623, 726, 1366, 1933, 1966, 2032, 2198, 2419
BtsI	GCAGTG	4 cut(s)	1054, 2658, 2800, 2849
BtsIMutI	CAGTG	7 cut(s)	1054, 1451, 1488, 1785, 2658, 2800, 2849
BveI	ACCTGC	1 cut(s)	1383
Cac8I	GCNNGC	4 cut(s)	532, 2618, 2800, 2866
CciI	TCATGA	3 cut(s)	570, 1207, 1705
CfoI	GCGC	2 cut(s)	75, 2191
Cfr10I	RCCGGY	1 cut(s)	498
Cfr9I	CCCGGG	1 cut(s)	1391
CseI	GACGC	1 cut(s)	1053
Csp6I	GTAC	3 cut(s)	598, 739, 2831
CspAI	ACCGGT	1 cut(s)	498
CspCI	CAANNNNNGTGG	4 cut(s)	2523, 2558, 2825, 2860
CviQI	GTAC	3 cut(s)	598, 739, 2831
DdeI	CTNAG	9 cut(s)	248, 672, 1017, 1040, 1458, 1905, 2392, 2651, 2671
DpnI	GATC	8 cut(s)	342, 1197, 1212, 1467, 1800, 1830, 2136, 2525
DpnII	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
DraI	TTTAAA	1 cut(s)	1065
EaeI	YGGCCR	3 cut(s)	202, 532, 1090
Eam1104I	CTCTTC	3 cut(s)	1002, 2088, 2274
EarI	CTCTTC	3 cut(s)	1002, 2088, 2274
EciI	GGCGGA	1 cut(s)	2323
Eco130I	CCWWGG	4 cut(s)	704, 1111, 2211, 2303
Eco147I	AGGCCT	1 cut(s)	7
Eco31I	GGTCTC	1 cut(s)	485
Eco32I	GATATC	1 cut(s)	2752
Eco57I	CTGAAG	4 cut(s)	1619, 2112, 2313, 2466
Eco81I	CCTNAGG	1 cut(s)	1905
Eco88I	CYCGRG	1 cut(s)	1391
EcoNI	CCTNNNNNAGG	1 cut(s)	1223
EcoRI	GAATTC	2 cut(s)	1727, 2264
EcoRII	CCWGG	6 cut(s)	907, 1224, 1469, 2022, 2788, 2873
EcoRV	GATATC	1 cut(s)	2752
EcoT14I	CCWWGG	4 cut(s)	704, 1111, 2211, 2303
ErhI	CCWWGG	4 cut(s)	704, 1111, 2211, 2303
Esp3I	CGTCTC	1 cut(s)	2674
FauI	CCCGC	2 cut(s)	52, 1866
FauNDI	CATATG	1 cut(s)	813
FbaI	TGATCA	2 cut(s)	2134, 2523
FblI	GTMKAC	2 cut(s)	503, 2883
Fnu4HI	GCNGC	6 cut(s)	168, 1886, 2055, 2082, 2246, 2730
FokI	GGATG	8 cut(s)	630, 733, 1373, 1940, 1953, 2039, 2185, 2426
Fsp4HI	GCNGC	6 cut(s)	168, 1886, 2055, 2082, 2246, 2730
FspAI	RTGCGCAY	1 cut(s)	2190
FspBI	CTAG	4 cut(s)	147, 902, 1620, 2709
FspI	TGCGCA	1 cut(s)	2190
GlaI	GCGC	2 cut(s)	74, 2190
GluI	GCNGC	6 cut(s)	168, 1886, 2055, 2082, 2246, 2730
GsuI	CTGGAG	1 cut(s)	1717
HaeII	RGCGCY	1 cut(s)	76
HaeIII	GGCC	6 cut(s)	7, 197, 204, 327, 534, 1092
HapII	CCGG	4 cut(s)	499, 1392, 2519, 2783
HgaI	GACGC	1 cut(s)	1053
HhaI	GCGC	2 cut(s)	75, 2191
Hin6I	GCGC	2 cut(s)	73, 2189
HinP1I	GCGC	2 cut(s)	73, 2189
HincII	GTYRAC	2 cut(s)	18, 2856
HindII	GTYRAC	2 cut(s)	18, 2856
HindIII	AAGCTT	3 cut(s)	255, 1058, 1601
HpaII	CCGG	4 cut(s)	499, 1392, 2519, 2783
HphI	GGTGA	7 cut(s)	284, 1127, 1205, 1417, 2329, 2533, 2772
Hpy166II	GTNNAC	9 cut(s)	18, 158, 393, 504, 592, 766, 976, 2856, 2884
Hpy8I	GTNNAC	9 cut(s)	18, 158, 393, 504, 592, 766, 976, 2856, 2884
Hpy99I	CGWCG	1 cut(s)	2726
HpyAV	CCTTC	6 cut(s)	86, 331, 1209, 1555, 1849, 1899
HpyCH4IV	ACGT	3 cut(s)	741, 2143, 2230
HpyF3I	CTNAG	9 cut(s)	248, 672, 1017, 1040, 1458, 1905, 2392, 2651, 2671
HpySE526I	ACGT	3 cut(s)	741, 2143, 2230
HspAI	GCGC	2 cut(s)	73, 2189
Ksp22I	TGATCA	2 cut(s)	2134, 2523
Kzo9I	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
LguI	GCTCTTC	1 cut(s)	1002
LmnI	GCTCC	4 cut(s)	658, 1310, 1957, 2681
Lsp1109I	GCAGC	5 cut(s)	179, 2041, 2068, 2257, 2716
LweI	GCATC	9 cut(s)	608, 865, 982, 1314, 1921, 1975, 2186, 2207, 2702
MaeI	CTAG	4 cut(s)	147, 902, 1620, 2709
MaeII	ACGT	3 cut(s)	741, 2143, 2230
MaeIII	GTNAC	7 cut(s)	272, 344, 849, 1115, 1405, 1486, 1609
MalI	GATC	8 cut(s)	342, 1197, 1212, 1467, 1800, 1830, 2136, 2525
MboI	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
MfeI	CAATTG	3 cut(s)	638, 683, 711
MhlI	GDGCHC	7 cut(s)	160, 395, 731, 768, 2236, 2493, 2852
MlsI	TGGCCA	1 cut(s)	204
MluNI	TGGCCA	1 cut(s)	204
MlyI	GAGTC	4 cut(s)	1443, 1535, 2593, 2645
MmeI	TCCRAC	2 cut(s)	1663, 1979
Mox20I	TGGCCA	1 cut(s)	204
MscI	TGGCCA	1 cut(s)	204
MseI	TTAA	7 cut(s)	222, 369, 665, 840, 1064, 1316, 1850
MslI	CAYNNNNRTG	3 cut(s)	265, 321, 2142
Msp20I	TGGCCA	1 cut(s)	204
MspA1I	CMGCKG	1 cut(s)	671
MspCI	CTTAAG	1 cut(s)	368
MspI	CCGG	4 cut(s)	499, 1392, 2519, 2783
MspR9I	CCNGG	8 cut(s)	909, 1226, 1392, 1393, 1471, 2024, 2790, 2875
MunI	CAATTG	3 cut(s)	638, 683, 711
Mva1269I	GAATGC	3 cut(s)	2108, 2191, 2663
MvaI	CCWGG	6 cut(s)	909, 1226, 1471, 2024, 2790, 2875
NciI	CCSGG	2 cut(s)	1392, 1393
NdeI	CATATG	1 cut(s)	813
NdeII	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
NlaIV	GGNNCC	5 cut(s)	1312, 1953, 2002, 2683, 2787
NmeAIII	GCCGAG	1 cut(s)	2034
NmuCI	GTSAC	5 cut(s)	272, 849, 1115, 1405, 1486
NsbI	TGCGCA	1 cut(s)	2190
NspV	TTCGAA	2 cut(s)	66, 2497
OliI	CACNNNNGTG	2 cut(s)	321, 2142
PagI	TCATGA	3 cut(s)	570, 1207, 1705
PasI	CCCWGGG	1 cut(s)	2874
PceI	AGGCCT	1 cut(s)	7
PciSI	GCTCTTC	1 cut(s)	1002
PctI	GAATGC	3 cut(s)	2108, 2191, 2663
PfeI	GAWTC	6 cut(s)	417, 632, 1765, 2320, 2546, 2675
PfoI	TCCNGGA	1 cut(s)	2022
PinAI	ACCGGT	1 cut(s)	498
PkrI	GCNGC	6 cut(s)	169, 1887, 2056, 2083, 2247, 2731
PleI	GAGTC	4 cut(s)	1442, 1534, 2592, 2644
PpsI	GAGTC	4 cut(s)	1442, 1534, 2592, 2644
Ppu21I	YACGTR	2 cut(s)	742, 2144
PshBI	ATTAAT	1 cut(s)	1850
Psp6I	CCWGG	6 cut(s)	907, 1224, 1469, 2022, 2788, 2873
PspGI	CCWGG	6 cut(s)	907, 1224, 1469, 2022, 2788, 2873
PspN4I	GGNNCC	5 cut(s)	1312, 1953, 2002, 2683, 2787
PstI	CTGCAG	2 cut(s)	834, 983
RsaI	GTAC	3 cut(s)	599, 740, 2832
RsaNI	GTAC	3 cut(s)	598, 739, 2831
RseI	CAYNNNNRTG	3 cut(s)	265, 321, 2142
SapI	GCTCTTC	1 cut(s)	1002
SaqAI	TTAA	7 cut(s)	222, 369, 665, 840, 1064, 1316, 1850
SatI	GCNGC	6 cut(s)	168, 1886, 2055, 2082, 2246, 2730
Sau3AI	GATC	8 cut(s)	340, 1195, 1210, 1465, 1798, 1828, 2134, 2523
SchI	GAGTC	4 cut(s)	1443, 1535, 2593, 2645
ScrFI	CCNGG	8 cut(s)	909, 1226, 1392, 1393, 1471, 2024, 2790, 2875
SduI	GDGCHC	7 cut(s)	160, 395, 731, 768, 2236, 2493, 2852
SfaNI	GCATC	9 cut(s)	608, 865, 982, 1314, 1921, 1975, 2186, 2207, 2702
SfcI	CTRYAG	5 cut(s)	512, 830, 979, 1255, 1741
SfuI	TTCGAA	2 cut(s)	66, 2497
SmaI	CCCGGG	1 cut(s)	1393
SmiMI	CAYNNNNRTG	3 cut(s)	265, 321, 2142
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
SseBI	AGGCCT	1 cut(s)	7
SsiI	CCGC	8 cut(s)	45, 270, 669, 1873, 1886, 2308, 2315, 2825
SspI	AATATT	2 cut(s)	110, 2484
SspMI	CTAG	4 cut(s)	147, 902, 1620, 2709
StuI	AGGCCT	1 cut(s)	7
StyD4I	CCNGG	8 cut(s)	907, 1224, 1390, 1391, 1469, 2022, 2788, 2873
StyI	CCWWGG	4 cut(s)	704, 1111, 2211, 2303
TaiI	ACGT	3 cut(s)	744, 2146, 2233
TauI	GCSGC	1 cut(s)	1888
TfiI	GAWTC	6 cut(s)	417, 632, 1765, 2320, 2546, 2675
Tru1I	TTAA	7 cut(s)	222, 369, 665, 840, 1064, 1316, 1850
Tru9I	TTAA	7 cut(s)	222, 369, 665, 840, 1064, 1316, 1850
TscAI	CASTG	7 cut(s)	1054, 1458, 1495, 1792, 2665, 2800, 2849
TseFI	GTSAC	5 cut(s)	272, 849, 1115, 1405, 1486
TseI	GCWGC	5 cut(s)	167, 2054, 2081, 2245, 2729
Tsp45I	GTSAC	5 cut(s)	272, 849, 1115, 1405, 1486
TspGWI	ACGGA	3 cut(s)	204, 671, 887
TspMI	CCCGGG	1 cut(s)	1391
TspRI	CASTG	7 cut(s)	1054, 1458, 1495, 1792, 2665, 2800, 2849
Vha464I	CTTAAG	1 cut(s)	368
VneI	GTGCAC	3 cut(s)	156, 391, 764
VspI	ATTAAT	1 cut(s)	1850
XagI	CCTNNNNNAGG	1 cut(s)	1223
XapI	RAATTY	7 cut(s)	938, 1023, 1280, 1727, 2264, 2298, 2512
XcmI	CCANNNNNNNNNTGG	3 cut(s)	2209, 2407, 2841
XmaI	CCCGGG	1 cut(s)	1391
XmiI	GTMKAC	2 cut(s)	503, 2883
XspI	CTAG	4 cut(s)	147, 902, 1620, 2709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.