Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002006

Physical Location & Seq

Genomic Coordinates Reverse (-)

37926257 .. 37933862

Gene Structure 7606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g51100.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3648 bp

ATGGATCCGTATACACTCAAGTCTGTGGCAGACTTGCCGGCTCCTTTTCGAGCTTGTTTTAGCTTTAGGTATTTCAACTCTTTGCAGAGTGAATGCTTTCCTGCTTGTTTCCACTCAGATGAGAACATGGTTGTGTCAGCACCAACCGGAAGTGGTAAAACAGTCATTTTTGAGCTTTGCATTTTGAGGCTTCTTTCAAGATTCATCTCTGAGGATGGGAGGTTTAAACCTACAAATGGAACTCTCAAAACAATCTATATTGCGCCATCAAAGGCTTTAGTTCAAGAGAAGGTTCGTGACTGGACCCAGAAGTTTGGATCTCGGGGCATAGTTTGCTTGGAGCTCACCGGAGATAATGAATCTTACAACACCAGGAATTTACAGGAAGCAGACATTATTTTAACCACTCCTGAGAAATTTGATGCAGTAACGCGGTATCGCGTAAAGGACGGTGGATTGGGCTTTTTCAGCGATATTGCACTTCTACTTATTGATGAAGTTCATCTATTGAATGATCCTCGTGGAGCAGTTTTGGAAGGAATAGTTAGCAGAATCAAAATGCTTGCTCACAACCCTGAAATGAAATCAAGCTCTCTGGCTCATGTTCGTTTTCTAGCTGTGTCTGCAACCATTCCCAATATTGAGGACCTTGCGGAGTGGCTCAAGGTGCCTGTCCAAGGAATTAAAAGGTTTGGAGAAGAAATGAGGCCTGTCAAGCTGACCACAAAAGTTTTTGGCTACGCCCCAGCAAAAAATGATTTTCTGTTTGAAAAGCGCCTTCAAAACTACATATTCGATATTCTTATGCAGCATTCAAGAGGGAAGTCTGCTCTAGTTTTTTGCTCAACTAGAAAAGGTGCACAAGAAGCAGCACAGATACTTTCTCAGGCAGTGATGGCCTTTGGCCATTCAAATCCATTCATTAAAAGCAGAGAACAGCAAGAGAGGCTAAGGGAAGCTTCATTGTCATGCAGTGACAAACAAATGCAATCATATATGATTTATGGTGTTGGTTATCACAACGGTGGCCTTTGCCTCAAAGATCGTAATCTCGTTGAAAGTCTTTTCCTTAAGGGTGATCTTCAAATTTTGTGTACAACAAATACTCTTGCTCATGGAATCAACCTACCAGCACATACAGTAGTCATAAAATCAACACAGCACTTTAACAAAGAGAAAGGAGTCTACATGGAAATTGACCGATCTACACTACTACAGATGTGCGGGAGGGCAGGTCGGCCACCGTTTGATGATACAGGAATGGTTATAATTATGACAAGAAGAGATACGGTTCACTTGTATGAGAATCTCTTGAATGGATGTGAGATGGTGGAATCACAATTGCTTTCATGTTTGACGGAGCATTTAACTGCGGAGATAGTTCAACTGACTGTCTCTGATATAACAAGGGCAATTGAATGGATGAAGTGTTCTTTCTTGTATGTGAGAATGAAGAAGAACCCTGCACACTATGCAATTAGAAAAGTGATTTCCAATGATCGTATAGAAAAGCATATGCTAGATGTCTGTTTACAGAAAGTTAATGAGTTATCGCAGCATCAGATGATATGGACTGATGAAGATGGTTTTCTGTTGAAACCACTAGAACCTGGGAGGCTGATGACGAAGTACTATTTGAAATTCGACACAATGAAATACATTATTCAGACACCTGTAAACTGCAGCTTGGAAGATGCTCTTCATGTTATATGCCGTGCTGAGGAAATTTCATGGATACAGCTCAGGCGGAATGAGAAGAAGCTTTTAAATGACATAAACACTGATAAAGATGGTCGACTTCGCTTTCACATTCTTGGTGACAAAGGGAAGCGAAAAAAGCGTATTCAAACCAGAGAAGAAAAGATATTTCTTTTGGCTAATGACTGCTTGACTGGTGATCCTTCGGTTCATGATCTGTCCCTTACCCAGGATATGAACTCCATATGCTCAAATGGCTGCAGAATTGCCAGGTGCATGAAGGAATTTTTCATTTACCAAAAGAACTACAAAGGGGCCTTGAATTCTATGCTTTTGGCAAAGTCTATGTATCAAAAACTCTGGGATGACAGTCCATACTTGCTGAAACAATTACCAGGGATTGGAATGGTGACCGCAAAGGCACTACATTCGATGGGAGTTAAATCATTTGAGACACTGGCAGAGGCTGATCCTAGGAGAATAGAGATAGTCAGTGGTCGAAAATACCCATTTGGCAACCATATAAAAGAGTCTCTACTGTCTCTACCTCCAAAAGTTGAGTTGAAAGTTGAGGAAACTGAACCTCGGGGGCAAGGGAAACTGAAGCTAGCAGTAACACTGACTAGGCTATCACCGACTCTCCAATCAACAAAACGACATTATGCTGATATGATTGTAGGTTCAGAAGAAGATAACCTGATTCTCTTTCATGAGAAAATAAGAGTTGATGAGTTCTCGAGCCCCTATAGCGCAACAGTTCTCCTGCCAAAACCCCAACAAGGAAAGCTGACGATTAAGGCTGTTCTTATATTTGAAGATTACATTGGCATTGACCTAAACCAGGAGCTAATATTAATGAAGGAAAGCAGTTTCAGAACAAATAACAAACGAGGAATAAAAGCACCCTCTCTTCCTGTACCTGAGGAAGTATGTATTATAGAAGATGATACTTATGAAGGCCCGAGTGAAGTGCTTCCAAACTCGAAGAAATCCAAAAGGGTAGATGGTTCCATGCCCAGTTTCAAGCTTCTAGATGATGACTCTGAAGAAGATGAGGTTGCTGATAAAGTTCATGAAGATGAAATTGCTGCCAAAGTTCAAAATGATGACAACATTGTGACACAACAAACAGTATTTGACCACATACGTGAAAAGGCAAAGAACTTCCCTGTCGTGGTGGCATCAAATAGTAAGTTTCCTCCATCATCAGAGCCCTTGCTTTTGGCAAGGAAACGTGCTCGTGAGAAGAAGCTTGGAATGGAAAGTGGAGCAGAGGTTCCGGAATGGAATAAAGTTCCAAGACGAACTGTGGTCAATCCATCTTCAGAACCTAAAGAAGAACAACATTTTTCAAGTATCAACAATCATCCAACTCCCAGAAGCTCAGCTGCCCAGAACTTCATGGATGACAGAGCTGGGCATCCCTCTGACCTTGAAGATGGCAAATTGAAAACGTTAACAGGAGAAACGATATTCGACCACATACGCACGAAAGCTAAGATTTTTCCAGTGATTGGTAAACCAAATGTGGTGGAGGCCGAGTCTTTAATCCAGAGAAAAGAATCCCCATATAAGACTGAAAAAGAGTTTAGTATGGACAGTACTGCCATTCTGAAAGGAACAAAACCAAATGAAGTTATTAGAGATACTGAATCTGATGGGATGTTGTTCTCCAGAAGCTCCTGCAACCTTCCTGTAAATTTGAAGGTTTCTCCTGGAGGTTTAGACAATGGAGCTAATCTCTCATCAAGTAACATGCTATCTTTCGATATTTCCATGTTCAAGAATCCGAAGCGACCTGCAGATGTTGGAAGCACGATGGAGAATACTAGGAAGAAACATCAGCACTCTCCAATTGTACCACCAAGGCACTGTTCATTCACAGCAGTTGGAAAATCCAGGGAAGCAGAAACATTTCTCGGGTTTGAGAGTGTCTTTTCCTTTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048285 GO:0051321 GO:0061982 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140013 GO:0140098 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HHH_5 Helicase_C PPR Sec63

Protein Analysis

1216

Amino Acids

137.3

Weight (kDa)

8.37

Isoelectric Point (pI)

45.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	27 - 216	6.2e-30	DEAD/DEAH box helicase
ResIII	PF04851	38 - 173	8.7e-09	Type III restriction enzyme, res subunit
Helicase_C	PF00271	334 - 413	4.5e-08	Helicase conserved C-terminal domain
WHD_SNRNP200	PF23445	445 - 524	4.6e-13	Winged Helix-turn-helix domain
Sec63	PF02889	534 - 848	3.5e-47	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730
fragaria_vesca	FvH4_6g51100
malus_domestica	MD09G1029000.v1.1 MD09G1029100.v1.1
prunus_persica	Prupe.3G288900_v2.0.a1
pyrus_communis	pycom111g02300 pycom111g02310
rosa_chinensis	RchiOBHm_Chr2g0089321 RchiOBHm_Chr2g0172661 RchiOBHm_Chr2g0172671
rosa_laevigata	RLG00000022075 RLG00000022122 RLG00000022126
rosa_multiflora	Rmu_sc0002053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00079680 Rroxscaffold_2G00080200 Rroxscaffold_2G00080420
rosa_rugosa	Rorug01G0489000 Rorug01G0489100 Rorug02G0246000 Rorug02G0560500.1
rosa_samantha	Rh2AG637300 Rh2AG637400 Rh2AG637500 Rh2AG637900 Rh2BG650700 Rh2BG650800 Rh2BG650900 Rh2BG651500 Rh2CG045200 Rh2CG045300 Rh2CG610500 Rh2CG617200 Rh2CG617600 Rh2DG658400 Rh2DG664700 Rh2DG665400
rosa_wichuraiana	Rw2G052240 Rw2G052720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1268
Acc36I	ACCTGC	2 cut(s)	1223, 3505
AccB1I	GGYRCC	1 cut(s)	667
AccB7I	CCANNNNNTGG	2 cut(s)	2099, 3212
AccI	GTMKAC	3 cut(s)	11, 1185, 1795
AccII	CGCG	2 cut(s)	433, 441
AccIII	TCCGGA	1 cut(s)	2977
AciI	CCGC	6 cut(s)	433, 653, 1224, 1373, 1747, 2112
AclI	AACGTT	1 cut(s)	3152
AclWI	GGATC	5 cut(s)	12, 325, 509, 1892, 2162
AcoI	YGGCCR	2 cut(s)	904, 1238
AcsI	RAATTY	8 cut(s)	376, 416, 1086, 1640, 1725, 1982, 2020, 3397
AcuI	CTGAAG	3 cut(s)	2321, 2763, 3006
AfaI	GTAC	5 cut(s)	1096, 1631, 2616, 3301, 3558
AfiI	CCNNNNNNNGG	9 cut(s)	236, 677, 1720, 1927, 2099, 2477, 2539, 2872, 3212
AflII	CTTAAG	1 cut(s)	1070
AjnI	CCWGG	8 cut(s)	371, 1609, 1926, 1967, 2092, 2538, 3412, 3596
AjuI	GAANNNNNNNTTGG	4 cut(s)	2505, 2537, 3556, 3588
AleI	CACNNNNGTG	2 cut(s)	1023, 2844
AloI	GAACNNNNNNTCC	4 cut(s)	1414, 1446, 2958, 2990
Alw21I	GWGCWC	3 cut(s)	345, 862, 2938
Alw26I	GTCTC	4 cut(s)	1399, 2144, 2235, 2244
Alw44I	GTGCAC	1 cut(s)	858
AlwI	GGATC	5 cut(s)	12, 325, 509, 1892, 2162
AlwNI	CAGNNNCTG	1 cut(s)	2165
Ama87I	CYCGRG	5 cut(s)	321, 2283, 2434, 2659, 3617
Aor13HI	TCCGGA	1 cut(s)	2977
AoxI	GGCC	8 cut(s)	707, 897, 904, 1027, 1238, 2013, 2656, 3234
ApaLI	GTGCAC	1 cut(s)	858
ApeKI	GCWGC	7 cut(s)	808, 869, 1555, 1683, 1956, 2786, 3086
ApoI	RAATTY	8 cut(s)	376, 416, 1086, 1640, 1725, 1982, 2020, 3397
AseI	ATTAAT	1 cut(s)	2552
Asp700I	GAANNNNTTC	3 cut(s)	96, 2670, 3612
AspA2I	CCTAGG	1 cut(s)	2171
AspLEI	GCGC	3 cut(s)	265, 777, 2450
AspS9I	GGNCC	4 cut(s)	303, 646, 2013, 2657
AsuHPI	GGTGA	6 cut(s)	337, 1088, 1829, 1907, 2119, 2322
AsuNHI	GCTAGC	1 cut(s)	2305
AvaI	CYCGRG	5 cut(s)	321, 2283, 2434, 2659, 3617
AvaII	GGWCC	2 cut(s)	303, 646
AvrII	CCTAGG	1 cut(s)	2171
AxyI	CCTNAGG	1 cut(s)	2619
BaeGI	GKGCMC	1 cut(s)	862
BalI	TGGCCA	1 cut(s)	906
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	667
BanII	GRGCYC	3 cut(s)	345, 2441, 2913
BauI	CACGAG	2 cut(s)	519, 2937
Bbv12I	GWGCWC	3 cut(s)	345, 862, 2938
BbvCI	CCTCAGC	1 cut(s)	1719
BbvI	GCAGC	7 cut(s)	820, 881, 1567, 1695, 1943, 2773, 3073
BceAI	ACGGC	1 cut(s)	1698
BcgI	CGANNNNNNTGC	4 cut(s)	2109, 2143, 2650, 2684
BciT130I	CCWGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
BciVI	GTATCC	1 cut(s)	1728
BcoDI	GTCTC	4 cut(s)	1399, 2144, 2235, 2244
BfmI	CTRYAG	5 cut(s)	1214, 1681, 1957, 2443, 3498
BfoI	RGCGCY	1 cut(s)	778
BfrI	CTTAAG	1 cut(s)	1070
BfuAI	ACCTGC	2 cut(s)	1223, 3505
BfuI	GTATCC	1 cut(s)	1728
BisI	GCNGC	7 cut(s)	809, 870, 1556, 1684, 1957, 2787, 3087
BlnI	CCTAGG	1 cut(s)	2171
BlpI	GCTNAGC	1 cut(s)	3082
BlsI	GCNGC	7 cut(s)	810, 871, 1557, 1685, 1958, 2788, 3088
BmcAI	AGTACT	2 cut(s)	1631, 3301
Bme1390I	CCNGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
Bme18I	GGWCC	2 cut(s)	303, 646
BmeT110I	CYCGRG	5 cut(s)	321, 2283, 2434, 2659, 3617
BmgT120I	GGNCC	4 cut(s)	303, 646, 2013, 2657
BmiI	GGNNCC	7 cut(s)	6, 42, 305, 669, 2014, 2707, 2976
BmrFI	CCNGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
BmrI	ACTGGG	1 cut(s)	2709
BmsI	GCATC	5 cut(s)	412, 1567, 1684, 2888, 3127
BmtI	GCTAGC	1 cut(s)	2309
BmuI	ACTGGG	1 cut(s)	2709
BplI	GAGNNNNNCTC	2 cut(s)	3423, 3455
BpmI	CTGGAG	2 cut(s)	3355, 3435
Bpu10I	CCTNAGC	3 cut(s)	950, 1719, 1742
Bpu1102I	GCTNAGC	1 cut(s)	3082
BpuEI	CTTGAG	1 cut(s)	647
BsaAI	YACGTR	1 cut(s)	2846
BsaBI	GATNNNNATC	1 cut(s)	1047
BsaJI	CCNNGG	8 cut(s)	676, 1610, 1926, 2093, 2171, 2282, 3563, 3597
BsaWI	WCCGGW	3 cut(s)	146, 347, 2977
BsaXI	ACNNNNNCTCC	8 cut(s)	1219, 1249, 2322, 2352, 2958, 2988, 3224, 3254
Bsc4I	CCNNNNNNNGG	9 cut(s)	236, 677, 1720, 1927, 2099, 2477, 2539, 2872, 3212
Bse118I	RCCGGY	1 cut(s)	37
Bse1I	ACTGG	5 cut(s)	305, 1897, 2160, 2715, 3206
Bse21I	CCTNAGG	1 cut(s)	2619
Bse8I	GATNNNNATC	1 cut(s)	1047
BseAI	TCCGGA	1 cut(s)	2977
BseBI	CCWGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
BseDI	CCNNGG	8 cut(s)	676, 1610, 1926, 2093, 2171, 2282, 3563, 3597
BseGI	GGATG	8 cut(s)	220, 1325, 1428, 2068, 3064, 3109, 3118, 3366
BseJI	GATNNNNATC	1 cut(s)	1047
BseLI	CCNNNNNNNGG	9 cut(s)	236, 677, 1720, 1927, 2099, 2477, 2539, 2872, 3212
BseMII	CTCAG	8 cut(s)	129, 201, 402, 899, 1710, 1756, 2610, 3096
BseNI	ACTGG	5 cut(s)	305, 1897, 2160, 2715, 3206
BseSI	GKGCMC	1 cut(s)	862
BseXI	GCAGC	7 cut(s)	820, 881, 1567, 1695, 1943, 2773, 3073
BseYI	CCCAGC	2 cut(s)	745, 3113
BsgI	GTGCAG	1 cut(s)	1449
Bsh1236I	CGCG	2 cut(s)	433, 441
BshFI	GGCC	8 cut(s)	709, 899, 906, 1029, 1240, 2015, 2658, 3236
BshNI	GGYRCC	1 cut(s)	667
BsiHKAI	GWGCWC	3 cut(s)	345, 862, 2938
BsiHKCI	CYCGRG	5 cut(s)	321, 2283, 2434, 2659, 3617
BsiSI	CCGG	4 cut(s)	38, 147, 348, 2978
BslFI	GGGAC	1 cut(s)	1903
BslI	CCNNNNNNNGG	9 cut(s)	236, 677, 1720, 1927, 2099, 2477, 2539, 2872, 3212
BsmAI	GTCTC	4 cut(s)	1399, 2144, 2235, 2244
BsmFI	GGGAC	1 cut(s)	1903
BsmI	GAATGC	2 cut(s)	98, 811
BsnI	GGCC	8 cut(s)	709, 899, 906, 1029, 1240, 2015, 2658, 3236
BsoBI	CYCGRG	5 cut(s)	321, 2283, 2434, 2659, 3617
Bsp1286I	GDGCHC	5 cut(s)	345, 862, 2441, 2913, 2938
Bsp13I	TCCGGA	1 cut(s)	2977
Bsp1407I	TGTACA	1 cut(s)	1094
Bsp1720I	GCTNAGC	1 cut(s)	3082
BspACI	CCGC	6 cut(s)	433, 653, 1224, 1373, 1747, 2112
BspANI	GGCC	8 cut(s)	709, 899, 906, 1029, 1240, 2015, 2658, 3236
BspCNI	CTCAG	8 cut(s)	128, 202, 403, 898, 1711, 1755, 2611, 3095
BspEI	TCCGGA	1 cut(s)	2977
BspFNI	CGCG	2 cut(s)	433, 441
BspHI	TCATGA	3 cut(s)	1909, 2407, 2770
BspLI	GGNNCC	7 cut(s)	6, 42, 305, 669, 2014, 2707, 2976
BspMAI	CTGCAG	3 cut(s)	1685, 1961, 3502
BspMI	ACCTGC	2 cut(s)	1223, 3505
BspOI	GCTAGC	1 cut(s)	2309
BspPI	GGATC	5 cut(s)	12, 325, 509, 1892, 2162
BspQI	GCTCTTC	1 cut(s)	1704
BspT107I	GGYRCC	1 cut(s)	667
BspTI	CTTAAG	1 cut(s)	1070
BsrFI	RCCGGY	1 cut(s)	37
BsrGI	TGTACA	1 cut(s)	1094
BsrI	ACTGG	5 cut(s)	305, 1897, 2160, 2715, 3206
BssAI	RCCGGY	1 cut(s)	37
BssECI	CCNNGG	8 cut(s)	676, 1610, 1926, 2093, 2171, 2282, 3563, 3597
BssNAI	GTATAC	1 cut(s)	12
BssSI	CACGAG	2 cut(s)	519, 2937
BssT1I	CCWWGG	3 cut(s)	676, 2171, 3563
Bst1107I	GTATAC	1 cut(s)	12
Bst2BI	CACGAG	2 cut(s)	519, 2937
Bst2UI	CCWGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
Bst6I	CTCTTC	3 cut(s)	1276, 1704, 2613
BstAFI	CTTAAG	1 cut(s)	1070
BstAPI	GCANNNNNTGC	2 cut(s)	333, 1472
BstAUI	TGTACA	1 cut(s)	1094
BstBAI	YACGTR	1 cut(s)	2846
BstC8I	GCNNGC	3 cut(s)	39, 564, 2307
BstEII	GGTNACC	1 cut(s)	2107
BstENI	CCTNNNNNAGG	3 cut(s)	675, 1925, 2537
BstF5I	GGATG	8 cut(s)	220, 1325, 1428, 2068, 3064, 3109, 3118, 3366
BstFNI	CGCG	2 cut(s)	433, 441
BstH2I	RGCGCY	1 cut(s)	778
BstHHI	GCGC	3 cut(s)	265, 777, 2450
BstMAI	GTCTC	4 cut(s)	1399, 2144, 2235, 2244
BstNI	CCWGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
BstNSI	RCATGY	1 cut(s)	3457
BstPI	GGTNACC	1 cut(s)	2107
BstSCI	CCNGG	8 cut(s)	371, 1609, 1926, 1967, 2092, 2538, 3412, 3596
BstSFI	CTRYAG	5 cut(s)	1214, 1681, 1957, 2443, 3498
BstSLI	GKGCMC	1 cut(s)	862
BstUI	CGCG	2 cut(s)	433, 441
BstV1I	GCAGC	7 cut(s)	820, 881, 1567, 1695, 1943, 2773, 3073
BstX2I	RGATCY	2 cut(s)	4, 317
BstXI	CCANNNNNNTGG	1 cut(s)	314
BstYI	RGATCY	2 cut(s)	4, 317
BstZ17I	GTATAC	1 cut(s)	12
Bsu36I	CCTNAGG	1 cut(s)	2619
BsuI	GTATCC	1 cut(s)	1728
BsuRI	GGCC	8 cut(s)	709, 899, 906, 1029, 1240, 2015, 2658, 3236
BtsCI	GGATG	8 cut(s)	220, 1325, 1428, 2068, 3064, 3109, 3118, 3366
BtsI	GCAGTG	2 cut(s)	897, 979
BtsIMutI	CAGTG	8 cut(s)	897, 979, 1779, 2153, 2197, 2315, 3213, 3568
BveI	ACCTGC	2 cut(s)	1223, 3505
Cac8I	GCNNGC	3 cut(s)	39, 564, 2307
CaiI	CAGNNNCTG	1 cut(s)	2165
CciI	TCATGA	3 cut(s)	1909, 2407, 2770
CfoI	GCGC	3 cut(s)	265, 777, 2450
Cfr10I	RCCGGY	1 cut(s)	37
Cfr13I	GGNCC	4 cut(s)	303, 646, 2013, 2657
Csp6I	GTAC	5 cut(s)	1095, 1630, 2615, 3300, 3557
CspCI	CAANNNNNGTGG	2 cut(s)	3210, 3245
CviQI	GTAC	5 cut(s)	1095, 1630, 2615, 3300, 3557
DraI	TTTAAA	2 cut(s)	226, 1767
EaeI	YGGCCR	2 cut(s)	904, 1238
Eam1104I	CTCTTC	3 cut(s)	1276, 1704, 2613
EarI	CTCTTC	3 cut(s)	1276, 1704, 2613
EciI	GGCGGA	1 cut(s)	1762
Ecl136II	GAGCTC	1 cut(s)	343
Eco130I	CCWWGG	3 cut(s)	676, 2171, 3563
Eco147I	AGGCCT	1 cut(s)	709
Eco24I	GRGCYC	3 cut(s)	345, 2441, 2913
Eco47I	GGWCC	2 cut(s)	303, 646
Eco53kI	GAGCTC	1 cut(s)	343
Eco57I	CTGAAG	3 cut(s)	2321, 2763, 3006
Eco81I	CCTNAGG	1 cut(s)	2619
Eco88I	CYCGRG	5 cut(s)	321, 2283, 2434, 2659, 3617
Eco91I	GGTNACC	1 cut(s)	2107
EcoICRI	GAGCTC	1 cut(s)	343
EcoNI	CCTNNNNNAGG	3 cut(s)	675, 1925, 2537
EcoO109I	RGGNCCY	2 cut(s)	646, 2013
EcoO65I	GGTNACC	1 cut(s)	2107
EcoRI	GAATTC	1 cut(s)	2020
EcoRII	CCWGG	8 cut(s)	371, 1609, 1926, 1967, 2092, 2538, 3412, 3596
EcoT14I	CCWWGG	3 cut(s)	676, 2171, 3563
EcoT38I	GRGCYC	3 cut(s)	345, 2441, 2913
ErhI	CCWWGG	3 cut(s)	676, 2171, 3563
FalI	AAGNNNNNCTT	4 cut(s)	943, 975, 1683, 1715
FaqI	GGGAC	1 cut(s)	1903
FauI	CCCGC	1 cut(s)	1217
FauNDI	CATATG	2 cut(s)	1515, 1943
FblI	GTMKAC	3 cut(s)	11, 1185, 1795
Fnu4HI	GCNGC	7 cut(s)	809, 870, 1556, 1684, 1957, 2787, 3087
FokI	GGATG	8 cut(s)	227, 1332, 1435, 2075, 3051, 3105, 3116, 3373
FriOI	GRGCYC	3 cut(s)	345, 2441, 2913
Fsp4HI	GCNGC	7 cut(s)	809, 870, 1556, 1684, 1957, 2787, 3087
GlaI	GCGC	3 cut(s)	264, 776, 2449
GluI	GCNGC	7 cut(s)	809, 870, 1556, 1684, 1957, 2787, 3087
GsaI	CCCAGC	2 cut(s)	749, 3117
GsuI	CTGGAG	2 cut(s)	3355, 3435
HaeII	RGCGCY	1 cut(s)	778
HaeIII	GGCC	8 cut(s)	709, 899, 906, 1029, 1240, 2015, 2658, 3236
HapII	CCGG	4 cut(s)	38, 147, 348, 2978
HhaI	GCGC	3 cut(s)	265, 777, 2450
Hin6I	GCGC	3 cut(s)	263, 775, 2448
HinP1I	GCGC	3 cut(s)	263, 775, 2448
HincII	GTYRAC	2 cut(s)	1796, 3156
HindII	GTYRAC	2 cut(s)	1796, 3156
HindIII	AAGCTT	4 cut(s)	957, 1760, 2723, 2948
HpaI	GTTAAC	1 cut(s)	3156
HpaII	CCGG	4 cut(s)	38, 147, 348, 2978
HphI	GGTGA	6 cut(s)	337, 1088, 1829, 1907, 2119, 2322
HpyAV	CCTTC	9 cut(s)	283, 530, 788, 1911, 1972, 2551, 2648, 3397, 3398
HpyCH4IV	ACGT	3 cut(s)	2845, 2932, 3152
HpySE526I	ACGT	3 cut(s)	2845, 2932, 3152
HspAI	GCGC	3 cut(s)	263, 775, 2448
Kpn2I	TCCGGA	1 cut(s)	2977
KroI	GCCGGC	1 cut(s)	37
KroNI	GCCGGC	1 cut(s)	39
KspAI	GTTAAC	1 cut(s)	3156
LguI	GCTCTTC	1 cut(s)	1704
LmnI	GCTCC	8 cut(s)	46, 340, 524, 1360, 2542, 2966, 3383, 3431
Lsp1109I	GCAGC	7 cut(s)	820, 881, 1567, 1695, 1943, 2773, 3073
LweI	GCATC	5 cut(s)	412, 1567, 1684, 2888, 3127
MaeII	ACGT	3 cut(s)	2845, 2932, 3152
MaeIII	GTNAC	8 cut(s)	296, 427, 974, 1817, 2107, 2311, 2815, 3449
MfeI	CAATTG	3 cut(s)	1340, 1413, 3552
MflI	RGATCY	2 cut(s)	4, 317
MhlI	GDGCHC	5 cut(s)	345, 862, 2441, 2913, 2938
MlsI	TGGCCA	1 cut(s)	906
MluNI	TGGCCA	1 cut(s)	906
MlyI	GAGTC	5 cut(s)	1191, 2237, 2329, 2732, 3248
MmeI	TCCRAC	3 cut(s)	3092, 3487, 3568
Mox20I	TGGCCA	1 cut(s)	906
MroI	TCCGGA	1 cut(s)	2977
MroNI	GCCGGC	1 cut(s)	37
MroXI	GAANNNNTTC	3 cut(s)	96, 2670, 3612
MscI	TGGCCA	1 cut(s)	906
MslI	CAYNNNNRTG	7 cut(s)	117, 131, 967, 1023, 1299, 2775, 2844
Msp20I	TGGCCA	1 cut(s)	906
MspA1I	CMGCKG	1 cut(s)	3086
MspCI	CTTAAG	1 cut(s)	1070
MspI	CCGG	4 cut(s)	38, 147, 348, 2978
MspR9I	CCNGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
MssI	GTTTAAAC	1 cut(s)	226
MunI	CAATTG	3 cut(s)	1340, 1413, 3552
Mva1269I	GAATGC	2 cut(s)	98, 811
MvaI	CCWGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
MvnI	CGCG	2 cut(s)	433, 441
NaeI	GCCGGC	1 cut(s)	39
NdeI	CATATG	2 cut(s)	1515, 1943
NgoMIV	GCCGGC	1 cut(s)	37
NheI	GCTAGC	1 cut(s)	2305
NlaIV	GGNNCC	7 cut(s)	6, 42, 305, 669, 2014, 2707, 2976
NmeAIII	GCCGAG	1 cut(s)	3262
NmuCI	GTSAC	5 cut(s)	296, 974, 1817, 2107, 2815
NspI	RCATGY	1 cut(s)	3457
OliI	CACNNNNGTG	2 cut(s)	1023, 2844
PaeR7I	CTCGAG	1 cut(s)	2434
PagI	TCATGA	3 cut(s)	1909, 2407, 2770
PceI	AGGCCT	1 cut(s)	709
PciSI	GCTCTTC	1 cut(s)	1704
PctI	GAATGC	2 cut(s)	98, 811
PdiI	GCCGGC	1 cut(s)	39
PdmI	GAANNNNTTC	3 cut(s)	96, 2670, 3612
PflMI	CCANNNNNTGG	2 cut(s)	2099, 3212
PfoI	TCCNGGA	1 cut(s)	3412
PkrI	GCNGC	7 cut(s)	810, 871, 1557, 1685, 1958, 2788, 3088
PleI	GAGTC	5 cut(s)	1190, 2236, 2329, 2732, 3247
PmeI	GTTTAAAC	1 cut(s)	226
PpsI	GAGTC	5 cut(s)	1190, 2236, 2329, 2732, 3247
Ppu21I	YACGTR	1 cut(s)	2846
PpuMI	RGGWCCY	1 cut(s)	646
PshBI	ATTAAT	1 cut(s)	2552
PsiI	TTATAA	1 cut(s)	1268
Psp124BI	GAGCTC	1 cut(s)	345
Psp1406I	AACGTT	1 cut(s)	3152
Psp5II	RGGWCCY	1 cut(s)	646
Psp6I	CCWGG	8 cut(s)	371, 1609, 1926, 1967, 2092, 2538, 3412, 3596
PspEI	GGTNACC	1 cut(s)	2107
PspFI	CCCAGC	2 cut(s)	745, 3113
PspGI	CCWGG	8 cut(s)	371, 1609, 1926, 1967, 2092, 2538, 3412, 3596
PspN4I	GGNNCC	7 cut(s)	6, 42, 305, 669, 2014, 2707, 2976
PspPI	GGNCC	4 cut(s)	303, 646, 2013, 2657
PspPPI	RGGWCCY	1 cut(s)	646
PstI	CTGCAG	3 cut(s)	1685, 1961, 3502
PstNI	CAGNNNCTG	1 cut(s)	2165
PsuI	RGATCY	2 cut(s)	4, 317
PvuII	CAGCTG	1 cut(s)	3086
RsaI	GTAC	5 cut(s)	1096, 1631, 2616, 3301, 3558
RsaNI	GTAC	5 cut(s)	1095, 1630, 2615, 3300, 3557
RseI	CAYNNNNRTG	7 cut(s)	117, 131, 967, 1023, 1299, 2775, 2844
SacI	GAGCTC	1 cut(s)	345
SalI	GTCGAC	1 cut(s)	1794
SapI	GCTCTTC	1 cut(s)	1704
SatI	GCNGC	7 cut(s)	809, 870, 1556, 1684, 1957, 2787, 3087
Sau96I	GGNCC	4 cut(s)	303, 646, 2013, 2657
ScaI	AGTACT	2 cut(s)	1631, 3301
SchI	GAGTC	5 cut(s)	1191, 2237, 2329, 2732, 3248
ScrFI	CCNGG	8 cut(s)	373, 1611, 1928, 1969, 2094, 2540, 3414, 3598
SduI	GDGCHC	5 cut(s)	345, 862, 2441, 2913, 2938
SfaNI	GCATC	5 cut(s)	412, 1567, 1684, 2888, 3127
SfcI	CTRYAG	5 cut(s)	1214, 1681, 1957, 2443, 3498
Sfr274I	CTCGAG	1 cut(s)	2434
SinI	GGWCC	2 cut(s)	303, 646
SlaI	CTCGAG	1 cut(s)	2434
SmiMI	CAYNNNNRTG	7 cut(s)	117, 131, 967, 1023, 1299, 2775, 2844
SmlI	CTYRAG	4 cut(s)	17, 662, 1070, 2434
SmoI	CTYRAG	4 cut(s)	17, 662, 1070, 2434
SseBI	AGGCCT	1 cut(s)	709
SsiI	CCGC	6 cut(s)	433, 653, 1224, 1373, 1747, 2112
SspI	AATATT	2 cut(s)	640, 2550
SstI	GAGCTC	1 cut(s)	345
StuI	AGGCCT	1 cut(s)	709
StyD4I	CCNGG	8 cut(s)	371, 1609, 1926, 1967, 2092, 2538, 3412, 3596
StyI	CCWWGG	3 cut(s)	676, 2171, 3563
TaiI	ACGT	3 cut(s)	2848, 2935, 3155
TaqII	GACCGA	1 cut(s)	1215
TatI	WGTACW	3 cut(s)	1094, 1629, 3299
TscAI	CASTG	8 cut(s)	897, 979, 1786, 2160, 2197, 2322, 3213, 3575
TseFI	GTSAC	5 cut(s)	296, 974, 1817, 2107, 2815
TseI	GCWGC	7 cut(s)	808, 869, 1555, 1683, 1956, 2786, 3086
Tsp45I	GTSAC	5 cut(s)	296, 974, 1817, 2107, 2815
TspGWI	ACGGA	1 cut(s)	1373
TspRI	CASTG	8 cut(s)	897, 979, 1786, 2160, 2197, 2322, 3213, 3575
Van91I	CCANNNNNTGG	2 cut(s)	2099, 3212
Vha464I	CTTAAG	1 cut(s)	1070
VneI	GTGCAC	1 cut(s)	858
VpaK11BI	GGWCC	2 cut(s)	303, 646
VspI	ATTAAT	1 cut(s)	2552
XagI	CCTNNNNNAGG	3 cut(s)	675, 1925, 2537
XapI	RAATTY	8 cut(s)	376, 416, 1086, 1640, 1725, 1982, 2020, 3397
XbaI	TCTAGA	1 cut(s)	2728
XceI	RCATGY	1 cut(s)	3457
XhoI	CTCGAG	1 cut(s)	2434
XmaJI	CCTAGG	1 cut(s)	2171
XmiI	GTMKAC	3 cut(s)	11, 1185, 1795
XmnI	GAANNNNTTC	3 cut(s)	96, 2670, 3612
ZrmI	AGTACT	2 cut(s)	1631, 3301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.