Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002006

Physical Location & Seq

Genomic Coordinates Reverse (-)

3557554 .. 3562628

Gene Structure 5075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG045200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGCAAATGGTTTAACAACAATGCACGCAAACCAATGCATGCAAGCCACTGTAGCGGAGTGGCTCAAGGTGCCTGTCCAAGGGATTAAAAGATATCCTTATGCAATATTCAAGAGGGAAGTCTGCCTAATTTTTTGCTCAACTAGAAAAGGTGCACAAGAAGCAGCACAGATACTTTCTCAGACAGTCATGGCCTTTGGTCATTCAAATCCATTCATTAAAAGCAGAGAACAGCAAGAGAGGCTAAGGGAAGCTTCATTGTCATGCAGTGACAAACAAATGCAATCTTATATGATTTATGCTGTTGGTTATCACAATGGTGGCCTTTTCCTCAAGGATCGTAATCTCATTGGAAGTCTTTTCCTTAAGGGTGATGTTCAAATTTTGTGCACAACAAATACTCTTGCTCATGGAATCAACCTACCAGCACATACAGTAGTCATAAAATCAACACAGCACTCAAACAAAGAAAAAGGAGTCTACATGGAAATTGACGGATCTGCACTACTACAGATGAGTGGGAGGGCAGGTCTGCCACCATTTGATGATACCGGAATGGTTATAATCATGACAAGAAGAGATATGGTTCACTTGTATGAGAATCTCTTGAATGGATGTGAGATGGTGGAATCTCAGTACATTGCTTTCATGTTTGACGGAGCATTTAACTGCGGAGATAGCTATGACTGCTTACTTGAATTTTGTATCATCTATCTTCTGGAATATGAAGGGATACAGCTCAGGTGCAACGAGAAGAAGCTTCTAAATGACATAAACACTGATAAAGATGGTCGACTTCGCTTTCACATTCTTGGTGACAAAGGGAAGCGAAAAAAACGTATTCAAACCAGAGAAGAAAAGATATTTCTTTTGGCCAATGACTGCTTGAGTGGTGATCCTTCGGCTCATGATTTATCCCTTACCCAGGATATGAACCCCATATGCTCAAATGGCTGTAGAATTGTCAGATGCATGAAAGAATTTTTTATTTACCAAAAGAATTACAAAGGAGCCTTGAACTTGATGCTTTTGGCTAAATCTATGTATCAAAAACTCTGGGATGACAGTCCATACTTGCTGAAACAATTACCAGGGATTGGAATGGTGACTGCAAAGGCACTACATTCGATGGGAGTCAAATCATTTGAGACACTAGCTGAGGCTGATCCTAGGAGAATTGAGATAGTCACTGGTCGAAAATACTCATTTGGGAACCATATAAAAGAGTCTCTACTGTCTCTACCTCCAAAGGTCGAGTTGAAAGTTGAGGAAACTGAATGCCGGGGGCAAGGGAAATTGAAGCTAGCGGTAACACTGACTAGGCTATCACAGACGCTCCAATCAACAAAACGACATTATGCTGATATGATTGTAGGTTCAGAAGAAGATAACCTGATTCTCTTTCATGAGAAAATAAGAGTTGACGAATTCTCGAGCCCCTATAGCGCAACAGTTCTCCTGTCAAATCCCCAACAAGGAAAGCTGACTGTTAAGGCTGATCTTATATTTGAAGAATACAGTAAAGTCCCTGCCCTGATATTTCTAGTTTCCTTTACTTTACAAGTTACTATTGACTGGCCCAGTTTCAAGCTTCTAAATGAAGACTCTGAAGAAGATGAGGTTGCTGACAAAGTTCACGAAGATGAGATTGCTGCCAAAGTTCAAAATGATGACAAAGTTGTGACACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048285 GO:0051321 GO:0061982 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140013 GO:0140098 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HHH_5 Helicase_C PPR Sec63

Protein Analysis

563

Amino Acids

63.72

Weight (kDa)

6.55

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C	PF00271	99 - 177	1.3e-06	Helicase conserved C-terminal domain
Sec63	PF02889	241 - 508	4e-30	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730 AT3G27730
fragaria_vesca	FvH4_6g51100
malus_domestica	MD09G1029000.v1.1 MD09G1029100.v1.1
prunus_persica	Prupe.3G288900_v2.0.a1
pyrus_communis	pycom111g02300 pycom111g02310
rosa_chinensis	RchiOBHm_Chr2g0089321 RchiOBHm_Chr2g0172661 RchiOBHm_Chr2g0172671
rosa_laevigata	RLG00000022075 RLG00000022122 RLG00000022126
rosa_multiflora	Rmu_sc0002053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00079680 Rroxscaffold_2G00080200 Rroxscaffold_2G00080420
rosa_rugosa	Rorug01G0489000 Rorug01G0489100 Rorug02G0246000 Rorug02G0560500.1
rosa_samantha	Rh2AG637300 Rh2AG637400 Rh2AG637500 Rh2AG637900 Rh2BG650700 Rh2BG650800 Rh2BG650900 Rh2BG651500 Rh2CG045200 Rh2CG045300 Rh2CG610500 Rh2CG617200 Rh2CG617600 Rh2DG658400 Rh2DG664700 Rh2DG665400
rosa_wichuraiana	Rw2G052240 Rw2G052720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	563
Acc36I	ACCTGC	1 cut(s)	518
AccB1I	GGYRCC	1 cut(s)	70
AccB7I	CCANNNNNTGG	1 cut(s)	1097
AccI	GTMKAC	2 cut(s)	480, 793
AciI	CCGC	3 cut(s)	56, 672, 1307
AclWI	GGATC	4 cut(s)	345, 505, 890, 1160
AcoI	YGGCCR	1 cut(s)	873
AcsI	RAATTY	4 cut(s)	381, 698, 980, 1427
AcuI	CTGAAG	1 cut(s)	1629
AfaI	GTAC	1 cut(s)	638
AfiI	CCNNNNNNNGG	4 cut(s)	80, 925, 1097, 1475
AflII	CTTAAG	1 cut(s)	365
AjnI	CCWGG	2 cut(s)	924, 1090
AleI	CACNNNNGTG	1 cut(s)	318
AluBI	AGCT	8 cut(s)	254, 681, 739, 760, 1157, 1303, 1483, 1591
AluI	AGCT	8 cut(s)	254, 681, 739, 760, 1157, 1303, 1483, 1591
Alw21I	GWGCWC	2 cut(s)	157, 392
Alw26I	GTCTC	3 cut(s)	1142, 1233, 1242
Alw44I	GTGCAC	2 cut(s)	153, 388
AlwI	GGATC	4 cut(s)	345, 505, 890, 1160
Ama87I	CYCGRG	1 cut(s)	1432
AoxI	GGCC	4 cut(s)	192, 322, 873, 1577
ApaLI	GTGCAC	2 cut(s)	153, 388
ApeKI	GCWGC	2 cut(s)	164, 1652
ApoI	RAATTY	4 cut(s)	381, 698, 980, 1427
AspA2I	CCTAGG	1 cut(s)	1169
AspLEI	GCGC	1 cut(s)	1448
AspS9I	GGNCC	1 cut(s)	1578
AsuC2I	CCSGG	1 cut(s)	1283
AsuHPI	GGTGA	4 cut(s)	383, 827, 905, 1117
AsuNHI	GCTAGC	1 cut(s)	1303
AvaI	CYCGRG	1 cut(s)	1432
AvrII	CCTAGG	1 cut(s)	1169
BaeGI	GKGCMC	2 cut(s)	157, 392
BalI	TGGCCA	1 cut(s)	875
BanI	GGYRCC	1 cut(s)	70
BanII	GRGCYC	1 cut(s)	1439
BbsI	GAAGAC	1 cut(s)	1608
Bbv12I	GWGCWC	2 cut(s)	157, 392
BbvCI	CCTCAGC	1 cut(s)	1158
BbvI	GCAGC	2 cut(s)	176, 1639
BccI	CCATC	3 cut(s)	616, 782, 1123
BcgI	CGANNNNNNTGC	2 cut(s)	1107, 1141
BciT130I	CCWGG	2 cut(s)	926, 1092
BciVI	GTATCC	1 cut(s)	726
BcnI	CCSGG	1 cut(s)	1283
BcoDI	GTCTC	3 cut(s)	1142, 1233, 1242
BfaI	CTAG	6 cut(s)	144, 1154, 1170, 1304, 1320, 1544
BfmI	CTRYAG	4 cut(s)	51, 509, 955, 1441
BfrI	CTTAAG	1 cut(s)	365
BfuAI	ACCTGC	1 cut(s)	518
BfuI	GTATCC	1 cut(s)	726
BisI	GCNGC	2 cut(s)	165, 1653
BlnI	CCTAGG	1 cut(s)	1169
BlsI	GCNGC	2 cut(s)	166, 1654
Bme1390I	CCNGG	3 cut(s)	926, 1092, 1283
BmeT110I	CYCGRG	1 cut(s)	1432
BmgT120I	GGNCC	1 cut(s)	1578
BmiI	GGNNCC	3 cut(s)	72, 1012, 1214
BmrFI	CCNGG	3 cut(s)	926, 1092, 1283
BmrI	ACTGGG	1 cut(s)	1575
BmsI	GCATC	2 cut(s)	959, 1014
BmtI	GCTAGC	1 cut(s)	1307
BmuI	ACTGGG	1 cut(s)	1575
BpiI	GAAGAC	1 cut(s)	1608
Bpu10I	CCTNAGC	3 cut(s)	245, 740, 1158
BpuEI	CTTGAG	3 cut(s)	50, 317, 907
BpuMI	CCSGG	1 cut(s)	1283
BsaBI	GATNNNNATC	1 cut(s)	342
BsaJI	CCNNGG	5 cut(s)	79, 924, 1091, 1169, 1282
BsaWI	WCCGGW	1 cut(s)	551
BsaXI	ACNNNNNCTCC	4 cut(s)	514, 544, 1320, 1350
Bsc4I	CCNNNNNNNGG	4 cut(s)	80, 925, 1097, 1475
Bse1I	ACTGG	3 cut(s)	1195, 1580, 1581
Bse3DI	GCAATG	1 cut(s)	639
Bse8I	GATNNNNATC	1 cut(s)	342
BseBI	CCWGG	2 cut(s)	926, 1092
BseDI	CCNNGG	5 cut(s)	79, 924, 1091, 1169, 1282
BseGI	GGATG	2 cut(s)	620, 1066
BseJI	GATNNNNATC	1 cut(s)	342
BseLI	CCNNNNNNNGG	4 cut(s)	80, 925, 1097, 1475
BseMI	GCAATG	1 cut(s)	639
BseMII	CTCAG	4 cut(s)	194, 647, 754, 1149
BseNI	ACTGG	3 cut(s)	1195, 1580, 1581
BseSI	GKGCMC	2 cut(s)	157, 392
BseXI	GCAGC	2 cut(s)	176, 1639
BsgI	GTGCAG	1 cut(s)	486
BshFI	GGCC	4 cut(s)	194, 324, 875, 1579
BshNI	GGYRCC	1 cut(s)	70
BsiHKAI	GWGCWC	2 cut(s)	157, 392
BsiHKCI	CYCGRG	1 cut(s)	1432
BsiSI	CCGG	2 cut(s)	552, 1282
BslFI	GGGAC	1 cut(s)	1511
BslI	CCNNNNNNNGG	4 cut(s)	80, 925, 1097, 1475
BsmAI	GTCTC	3 cut(s)	1142, 1233, 1242
BsmFI	GGGAC	1 cut(s)	1511
BsmI	GAATGC	1 cut(s)	1283
BsnI	GGCC	4 cut(s)	194, 324, 875, 1579
BsoBI	CYCGRG	1 cut(s)	1432
Bsp1286I	GDGCHC	3 cut(s)	157, 392, 1439
Bsp143I	GATC	5 cut(s)	337, 497, 895, 1165, 1498
BspACI	CCGC	3 cut(s)	56, 672, 1307
BspANI	GGCC	4 cut(s)	194, 324, 875, 1579
BspCNI	CTCAG	4 cut(s)	193, 646, 753, 1150
BspHI	TCATGA	3 cut(s)	567, 907, 1405
BspLI	GGNNCC	3 cut(s)	72, 1012, 1214
BspMI	ACCTGC	1 cut(s)	518
BspOI	GCTAGC	1 cut(s)	1307
BspPI	GGATC	4 cut(s)	345, 505, 890, 1160
BspT107I	GGYRCC	1 cut(s)	70
BspTI	CTTAAG	1 cut(s)	365
BsrDI	GCAATG	1 cut(s)	639
BsrI	ACTGG	3 cut(s)	1195, 1580, 1581
BssECI	CCNNGG	5 cut(s)	79, 924, 1091, 1169, 1282
BssMI	GATC	5 cut(s)	337, 497, 895, 1165, 1498
BssT1I	CCWWGG	2 cut(s)	79, 1169
Bst2UI	CCWGG	2 cut(s)	926, 1092
Bst4CI	ACNGT	8 cut(s)	52, 187, 436, 1067, 1236, 1453, 1489, 1520
Bst6I	CTCTTC	1 cut(s)	571
BstAFI	CTTAAG	1 cut(s)	365
BstC8I	GCNNGC	4 cut(s)	27, 41, 45, 1305
BstDEI	CTNAG	5 cut(s)	180, 245, 633, 740, 1158
BstENI	CCTNNNNNAGG	2 cut(s)	78, 923
BstF5I	GGATG	2 cut(s)	620, 1066
BstHHI	GCGC	1 cut(s)	1448
BstKTI	GATC	5 cut(s)	340, 500, 898, 1168, 1501
BstMAI	GTCTC	3 cut(s)	1142, 1233, 1242
BstMBI	GATC	5 cut(s)	337, 497, 895, 1165, 1498
BstMWI	GCNNNNNNNGC	8 cut(s)	53, 70, 161, 241, 678, 687, 951, 1443
BstNI	CCWGG	2 cut(s)	926, 1092
BstNSI	RCATGY	1 cut(s)	43
BstSCI	CCNGG	3 cut(s)	924, 1090, 1281
BstSFI	CTRYAG	4 cut(s)	51, 509, 955, 1441
BstSLI	GKGCMC	2 cut(s)	157, 392
BstV1I	GCAGC	2 cut(s)	176, 1639
BstV2I	GAAGAC	1 cut(s)	1608
BstX2I	RGATCY	1 cut(s)	497
BstYI	RGATCY	1 cut(s)	497
BsuI	GTATCC	1 cut(s)	726
BsuRI	GGCC	4 cut(s)	194, 324, 875, 1579
BtsCI	GGATG	2 cut(s)	620, 1066
BtsI	GCAGTG	1 cut(s)	274
BtsIMutI	CAGTG	5 cut(s)	48, 274, 777, 1188, 1313
BveI	ACCTGC	1 cut(s)	518
Cac8I	GCNNGC	4 cut(s)	27, 41, 45, 1305
CciI	TCATGA	3 cut(s)	567, 907, 1405
CfoI	GCGC	1 cut(s)	1448
Cfr13I	GGNCC	1 cut(s)	1578
CseI	GACGC	1 cut(s)	1342
Csp6I	GTAC	1 cut(s)	637
CviQI	GTAC	1 cut(s)	637
DdeI	CTNAG	5 cut(s)	180, 245, 633, 740, 1158
DpnI	GATC	5 cut(s)	339, 499, 897, 1167, 1500
DpnII	GATC	5 cut(s)	337, 497, 895, 1165, 1498
EaeI	YGGCCR	1 cut(s)	873
Eam1104I	CTCTTC	1 cut(s)	571
EarI	CTCTTC	1 cut(s)	571
Eco130I	CCWWGG	2 cut(s)	79, 1169
Eco24I	GRGCYC	1 cut(s)	1439
Eco32I	GATATC	1 cut(s)	95
Eco57I	CTGAAG	1 cut(s)	1629
Eco88I	CYCGRG	1 cut(s)	1432
EcoNI	CCTNNNNNAGG	2 cut(s)	78, 923
EcoRI	GAATTC	1 cut(s)	1427
EcoRII	CCWGG	2 cut(s)	924, 1090
EcoRV	GATATC	1 cut(s)	95
EcoT14I	CCWWGG	2 cut(s)	79, 1169
EcoT22I	ATGCAT	2 cut(s)	41, 974
EcoT38I	GRGCYC	1 cut(s)	1439
ErhI	CCWWGG	2 cut(s)	79, 1169
FalI	AAGNNNNNCTT	4 cut(s)	82, 114, 238, 270
FaqI	GGGAC	1 cut(s)	1511
FauNDI	CATATG	1 cut(s)	941
FblI	GTMKAC	2 cut(s)	480, 793
Fnu4HI	GCNGC	2 cut(s)	165, 1653
FokI	GGATG	2 cut(s)	627, 1073
FriOI	GRGCYC	1 cut(s)	1439
Fsp4HI	GCNGC	2 cut(s)	165, 1653
FspBI	CTAG	6 cut(s)	144, 1154, 1170, 1304, 1320, 1544
GlaI	GCGC	1 cut(s)	1447
GluI	GCNGC	2 cut(s)	165, 1653
HaeIII	GGCC	4 cut(s)	194, 324, 875, 1579
HapII	CCGG	2 cut(s)	552, 1282
HgaI	GACGC	1 cut(s)	1342
HhaI	GCGC	1 cut(s)	1448
Hin6I	GCGC	1 cut(s)	1446
HinP1I	GCGC	1 cut(s)	1446
HincII	GTYRAC	2 cut(s)	794, 1423
HindII	GTYRAC	2 cut(s)	794, 1423
HindIII	AAGCTT	3 cut(s)	252, 758, 1589
HinfI	GANTC	8 cut(s)	414, 477, 601, 629, 1134, 1226, 1396, 1604
HpaII	CCGG	2 cut(s)	552, 1282
HphI	GGTGA	4 cut(s)	383, 827, 905, 1117
Hpy166II	GTNNAC	7 cut(s)	155, 390, 481, 589, 794, 1423, 1636
Hpy188I	TCNGA	4 cut(s)	183, 968, 1381, 1609
Hpy188III	TCNNGA	8 cut(s)	112, 568, 607, 719, 908, 1406, 1432, 1637
Hpy8I	GTNNAC	7 cut(s)	155, 390, 481, 589, 794, 1423, 1636
HpyAV	CCTTC	2 cut(s)	722, 909
HpyCH4III	ACNGT	8 cut(s)	52, 187, 436, 1067, 1236, 1453, 1489, 1520
HpyCH4IV	ACGT	1 cut(s)	838
HpyF10VI	GCNNNNNNNGC	8 cut(s)	53, 70, 161, 241, 678, 687, 951, 1443
HpyF3I	CTNAG	5 cut(s)	180, 245, 633, 740, 1158
HpySE526I	ACGT	1 cut(s)	838
HspAI	GCGC	1 cut(s)	1446
Kzo9I	GATC	5 cut(s)	337, 497, 895, 1165, 1498
LmnI	GCTCC	3 cut(s)	659, 1010, 1341
Lsp1109I	GCAGC	2 cut(s)	176, 1639
LweI	GCATC	2 cut(s)	959, 1014
MaeI	CTAG	6 cut(s)	144, 1154, 1170, 1304, 1320, 1544
MaeII	ACGT	1 cut(s)	838
MaeIII	GTNAC	7 cut(s)	269, 815, 1105, 1186, 1309, 1564, 1681
MalI	GATC	5 cut(s)	339, 499, 897, 1167, 1500
MboI	GATC	5 cut(s)	337, 497, 895, 1165, 1498
MflI	RGATCY	1 cut(s)	497
MhlI	GDGCHC	3 cut(s)	157, 392, 1439
MlsI	TGGCCA	1 cut(s)	875
MluNI	TGGCCA	1 cut(s)	875
MlyI	GAGTC	4 cut(s)	486, 1143, 1235, 1598
MnlI	CCTC	8 cut(s)	108, 234, 341, 516, 1153, 1254, 1261, 1612
Mox20I	TGGCCA	1 cut(s)	875
Mph1103I	ATGCAT	2 cut(s)	41, 974
MscI	TGGCCA	1 cut(s)	875
MseI	TTAA	6 cut(s)	14, 87, 219, 366, 666, 1491
MslI	CAYNNNNRTG	4 cut(s)	262, 318, 594, 1641
Msp20I	TGGCCA	1 cut(s)	875
MspCI	CTTAAG	1 cut(s)	365
MspI	CCGG	2 cut(s)	552, 1282
MspR9I	CCNGG	3 cut(s)	926, 1092, 1283
Mva1269I	GAATGC	1 cut(s)	1283
MvaI	CCWGG	2 cut(s)	926, 1092
MwoI	GCNNNNNNNGC	8 cut(s)	53, 70, 161, 241, 678, 687, 951, 1443
NciI	CCSGG	1 cut(s)	1283
NdeI	CATATG	1 cut(s)	941
NdeII	GATC	5 cut(s)	337, 497, 895, 1165, 1498
NheI	GCTAGC	1 cut(s)	1303
NlaIV	GGNNCC	3 cut(s)	72, 1012, 1214
NmuCI	GTSAC	5 cut(s)	269, 815, 1105, 1186, 1681
NsiI	ATGCAT	2 cut(s)	41, 974
NspI	RCATGY	1 cut(s)	43
OliI	CACNNNNGTG	1 cut(s)	318
PaeI	GCATGC	1 cut(s)	43
PaeR7I	CTCGAG	1 cut(s)	1432
PagI	TCATGA	3 cut(s)	567, 907, 1405
PctI	GAATGC	1 cut(s)	1283
PfeI	GAWTC	4 cut(s)	414, 601, 629, 1396
PflMI	CCANNNNNTGG	1 cut(s)	1097
PkrI	GCNGC	2 cut(s)	166, 1654
PleI	GAGTC	4 cut(s)	485, 1142, 1234, 1598
PpsI	GAGTC	4 cut(s)	485, 1142, 1234, 1598
PsiI	TTATAA	1 cut(s)	563
Psp6I	CCWGG	2 cut(s)	924, 1090
PspGI	CCWGG	2 cut(s)	924, 1090
PspN4I	GGNNCC	3 cut(s)	72, 1012, 1214
PspPI	GGNCC	1 cut(s)	1578
PsuI	RGATCY	1 cut(s)	497
RsaI	GTAC	1 cut(s)	638
RsaNI	GTAC	1 cut(s)	637
RseI	CAYNNNNRTG	4 cut(s)	262, 318, 594, 1641
SalI	GTCGAC	1 cut(s)	792
SaqAI	TTAA	6 cut(s)	14, 87, 219, 366, 666, 1491
SatI	GCNGC	2 cut(s)	165, 1653
Sau3AI	GATC	5 cut(s)	337, 497, 895, 1165, 1498
Sau96I	GGNCC	1 cut(s)	1578
SchI	GAGTC	4 cut(s)	486, 1143, 1235, 1598
ScrFI	CCNGG	3 cut(s)	926, 1092, 1283
SduI	GDGCHC	3 cut(s)	157, 392, 1439
SfaNI	GCATC	2 cut(s)	959, 1014
SfcI	CTRYAG	4 cut(s)	51, 509, 955, 1441
Sfr274I	CTCGAG	1 cut(s)	1432
SlaI	CTCGAG	1 cut(s)	1432
SmiMI	CAYNNNNRTG	4 cut(s)	262, 318, 594, 1641
SmlI	CTYRAG	5 cut(s)	65, 332, 365, 886, 1432
SmoI	CTYRAG	5 cut(s)	65, 332, 365, 886, 1432
SphI	GCATGC	1 cut(s)	43
SsiI	CCGC	3 cut(s)	56, 672, 1307
SspI	AATATT	1 cut(s)	108
SspMI	CTAG	6 cut(s)	144, 1154, 1170, 1304, 1320, 1544
StyD4I	CCNGG	3 cut(s)	924, 1090, 1281
StyI	CCWWGG	2 cut(s)	79, 1169
TaaI	ACNGT	8 cut(s)	52, 187, 436, 1067, 1236, 1453, 1489, 1520
TaiI	ACGT	1 cut(s)	841
TaqI	TCGA	5 cut(s)	793, 1127, 1195, 1254, 1433
TatI	WGTACW	1 cut(s)	636
TfiI	GAWTC	4 cut(s)	414, 601, 629, 1396
Tru1I	TTAA	6 cut(s)	14, 87, 219, 366, 666, 1491
Tru9I	TTAA	6 cut(s)	14, 87, 219, 366, 666, 1491
TscAI	CASTG	5 cut(s)	55, 274, 784, 1195, 1320
TseFI	GTSAC	5 cut(s)	269, 815, 1105, 1186, 1681
TseI	GCWGC	2 cut(s)	164, 1652
Tsp45I	GTSAC	5 cut(s)	269, 815, 1105, 1186, 1681
TspDTI	ATGAA	8 cut(s)	205, 246, 637, 741, 947, 989, 1394, 1614
TspGWI	ACGGA	2 cut(s)	510, 672
TspRI	CASTG	5 cut(s)	55, 274, 784, 1195, 1320
Van91I	CCANNNNNTGG	1 cut(s)	1097
Vha464I	CTTAAG	1 cut(s)	365
VneI	GTGCAC	2 cut(s)	153, 388
XagI	CCTNNNNNAGG	2 cut(s)	78, 923
XapI	RAATTY	4 cut(s)	381, 698, 980, 1427
XceI	RCATGY	1 cut(s)	43
XhoI	CTCGAG	1 cut(s)	1432
XmaJI	CCTAGG	1 cut(s)	1169
XmiI	GTMKAC	2 cut(s)	480, 793
XspI	CTAG	6 cut(s)	144, 1154, 1170, 1304, 1320, 1544
Zsp2I	ATGCAT	2 cut(s)	41, 974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.