Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001127

Physical Location & Seq

Genomic Coordinates Reverse (-)

6512515 .. 6515743

Gene Structure 3229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G10540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGAAGAGTTGCAGAACCTTAATTTTTGTGGCAATAATTCTCAACGGGCTGAGTACTTTCGTTGCACATGCCGGTGCTGAGAGCAAGGTTCACATAGTTTATTTGGGTGAGAAGCAGCACGATGATCCCGAGTTTGTCACGGAATCTCATCATCGGATGTTGTGGTCACTTCTTGGAAGTAAAGAGGATGCCCATAGTTCAATGGTCCATAGTTACCGACATGGCTTCTCGGGTTTTGCAGCCAAGCTTACCAAGTCCCAAGCCAAGAAGCTTGCAGATTTACCTGAAGTTGTTCACGTCACGCCGGATAGCTTCTACCAACTAGATACAACTCGGACTTGGGACTACTTAGGCCTTTCCGTCGCCAATCCTAAAAATCTTCTAAATGACACTAATATGGGTGAAGAAGTTATCATTGGCATTGTAGACTCAGGAGTTTGGCCAGAATCTGAAGTCTTTAATGACAATGGGATTGGACCAGTGCCAAGCCACTGGAAAGGAGGCTGTGTATCAGGAGAGAATTTCACTTCCTCTCAGTGCAACAAAAAGCTTATAGGAGCCAAATACTTCATCAATGGGTTTCTTGCGACGCACGAAAGCTTCAACTCCACAGAATCACTTGACTTTATTTCCCCTAGAGACCGTAGCGGACATGGCACGCATGTAGCCACCATAGCGGGTGGTTCCTACGTGCCTAGCATAAGCTACAAGGGGTTAGCTGGAGGGACTGTGAGAGGTGGGGCACCACGTGCTCGTATAGCGATGTACAAAGCTTGTTGGTATCTAGATCGTTTTGACATAAATACATGTTCATCTGCTGATATCTTGAAAGCTATGGATGAAGCTATGCATGATGGTGTTGATGTTTTGTCCTTGTCTATCGGCTATCGTTTTCCTTACTTCCCAGAAACTGATGTTCGCGCCGTGATAGCCACGGGAGCATTCCATGCTGTTTTAAAGGGTATCACAGTTGTTTGTTCGGGAGGTAACTCTGGTCCTGCGGCTCAGACTGTGGGAAACACGGCTCCATGGATTTTGACAGTGGCTGCAACTACTTTAGACCGATCTTTTCCCACACCTATCACACTTGGGAACAATAAACTGATATTGGGTCAAGCAATGTACACCGGTCCAGAACTTGGCTTCACTAGCTTGGTTTACCCAGAGAATCCAGGGAACAGCAACGAGAGTTTTTCTGGTGACTGTGAGCTTCTATTTTTCAACTCCAATCATACAATGGCGGGGAAAGTCGTGTTATGCTTCACAACATCAACACGTTACATCACTGTATCAAGTGCTGTGTCTTATGTGAAGGAAGCTGGTGGTCTTGGCGTAATTGTAGCAAGAAACCCCGGCGACAATCTTTCACCATGTGAAGATGATTTTCCTTGTGTTGCTGTTGACTACGAGCTTGGGACAGATATACTTTTATACATACGTTCCACAGGATTACCTGTTGTGAAGATACAACCTTCTAAAACACTTGTTGGACAACCAGTGGGCACAAAGGTTGCAGATTTCTCATCAAGAGGACCTAATTCAATTGAGCCTGCCATCCTCAAACCGGATATAGCAGCACCAGGAGTGAGCATATTAGCGGCTACAACTACCAATAAAACTTTCAACGACCGAGGATTCATTTTCTTGTCAGGGACATCAATGGCAGCTCCTACCATTTCAGGAGTTGTTGCTCTTCTCAAAGCTCTGCACCGTGATTGGTCTCCTGCTGCCATTAGATCAGCCATTGTCACCACAGCTTGGAGAACAGATCCATTTGGAGAGCAGATATTTGCAGAAGGGTCACCTCGGAAGCTAGCTGATCCGTTTGACTATGGTGGAGGCCTTGTGAATCCAGAGAAAGCTGCAAAACCTGGTCTTGTATATGACTTGGGACTTGAAGACTATGTTCTCTACATGTGCTCTGTTGGTTACAACGAGACATCAATCTCTCAACTTGTCGGAAAAGGAACAGTTTGTTCGAATCCCAAACCATCTGTTCTTGATTTTAACTTGCCTTCCATCACAATCCCAAACCTCAAAGATGAAGTCACTCTCACCAGAACCCTCACTAACGTTGGACAACTTGAGTCGGTCTATAAAGTTGTGATCGAGCCACCGATAGGCATTCAAGTGACTGTGACACCAGAGACGCTTCTGTTTAACTCTACAACCAAAAGGGTCTCTTTTAAAGTCAAAGTTTCGACCACACACAAAATCAACACAGGTTACTTCTTTGGAAGCTTGACTTGGAGTGACTCTCTACATAATGTGACCATTCCTCTCTCTGTGAGAACTCAAATTTTGCAGAACTACTACGATGAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0016787 GO:0017171 GO:0019538 GO:0022414 GO:0030154 GO:0030312 GO:0031012 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042742 GO:0043170 GO:0043207 GO:0044238 GO:0044421 GO:0044464 GO:0044706 GO:0045087 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051704 GO:0051707 GO:0060560 GO:0070011 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

775

Amino Acids

83.52

Weight (kDa)

6.04

Isoelectric Point (pI)

28.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	30 - 108	5.9e-22	Peptidase inhibitor I9
MORF_dom	PF21864	45 - 109	5.1e-08	Multiple organellar RNA editing factor 1, MORF domain
Peptidase_S8	PF00082	134 - 589	2.1e-44	Subtilase family
PA	PF02225	384 - 475	1.1e-06	PA domain
fn3_6	PF17766	668 - 763	2.2e-27	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001127)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32940 AT1G32940 AT1G32940 AT1G32940 AT1G32950 AT1G32950 AT1G32960 AT4G10510 AT4G10510 AT4G10510 AT4G10510 AT4G10520 AT4G10530 AT4G10540 AT4G10550 AT4G10550 AT4G10550 AT4G10550
fragaria_vesca	FvH4_5g10490 FvH4_5g10502
malus_domestica	MD00G1035000.v1.1
prunus_persica	Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133600_v2.0.a1 Prupe.5G133700_v2.0.a1
pyrus_communis	pycom01g12030 pycom14g11430 pycom14g11440 pycom14g11450 pycom14g11470 pycom14g11480 pycom14g11520
rosa_chinensis	RchiOBHm_Chr4g0389671 RchiOBHm_Chr7g0187621 RchiOBHm_Chr7g0187651
rosa_laevigata	RLG00000004761 RLG00000004765
rosa_multiflora	Rmu_sc0003144.1_g000021 Rmu_sc0004483.1_g000012 Rmu_ssc0000110.1_g000014
rosa_roxburghii	Rroxscaffold_3G00267240
rosa_rugosa	Rorug06G0483200
rosa_samantha	Rh4AG029600 Rh4BG022700 Rh7AG088100 Rh7AG088500 Rh7BG089400 Rh7BG089900 Rh7BG090200 Rh7CG088700 Rh7CG089100 Rh7DG090400 Rh7DG090700
rosa_wichuraiana	Rw0G002650 Rw4G002200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	742
AccB7I	CCANNNNNTGG	2 cut(s)	1139, 1758
AccI	GTMKAC	1 cut(s)	426
AccII	CGCG	1 cut(s)	921
AciI	CCGC	5 cut(s)	648, 677, 1001, 1241, 1598
AclI	AACGTT	1 cut(s)	2073
AclWI	GGATC	3 cut(s)	119, 1763, 1814
AcoI	YGGCCR	1 cut(s)	440
AcsI	RAATTY	2 cut(s)	520, 2298
AcuI	CTGAAG	2 cut(s)	306, 471
AcvI	CACGTG	1 cut(s)	749
AdeI	CACNNNGTG	2 cut(s)	749, 1373
AfaI	GTAC	3 cut(s)	55, 767, 1124
AfiI	CCNNNNNNNGG	4 cut(s)	1139, 1564, 1758, 2120
AflIII	ACRYGT	3 cut(s)	806, 1274, 1914
AgeI	ACCGGT	1 cut(s)	1127
AgsI	TTSAA	8 cut(s)	201, 604, 829, 1222, 1542, 1624, 1898, 2129
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	3 cut(s)	1171, 1579, 1870
AjuI	GAANNNNNNNTTGG	6 cut(s)	399, 431, 1604, 1636, 2230, 2262
Alw21I	GWGCWC	2 cut(s)	754, 1922
Alw26I	GTCTC	5 cut(s)	633, 1725, 1931, 2141, 2185
AlwI	GGATC	3 cut(s)	119, 1763, 1814
AlwNI	CAGNNNCTG	3 cut(s)	449, 911, 1046
Ama87I	CYCGRG	2 cut(s)	128, 229
AoxI	GGCC	3 cut(s)	352, 440, 1840
ApeKI	GCWGC	7 cut(s)	115, 239, 1046, 1574, 1664, 1727, 1862
ApoI	RAATTY	2 cut(s)	520, 2298
ArsI	GACNNNNNNTTYG	2 cut(s)	2031, 2063
AsiGI	ACCGGT	1 cut(s)	1127
Asp700I	GAANNNNTTC	1 cut(s)	291
AspLEI	GCGC	1 cut(s)	923
AspS9I	GGNCC	5 cut(s)	205, 476, 995, 1130, 1532
AsuC2I	CCSGG	1 cut(s)	1353
AsuHPI	GGTGA	7 cut(s)	119, 413, 1211, 1359, 1741, 1794, 2047
AsuII	TTCGAA	1 cut(s)	1979
AsuNHI	GCTAGC	1 cut(s)	1813
AvaI	CYCGRG	2 cut(s)	128, 229
AvaII	GGWCC	5 cut(s)	205, 476, 995, 1130, 1532
BaeGI	GKGCMC	2 cut(s)	745, 1505
BalI	TGGCCA	1 cut(s)	442
BanI	GGYRCC	1 cut(s)	742
BbrPI	CACGTG	1 cut(s)	749
BbsI	GAAGAC	1 cut(s)	1905
Bbv12I	GWGCWC	2 cut(s)	754, 1922
BbvI	GCAGC	7 cut(s)	127, 251, 1033, 1586, 1676, 1714, 1849
BccI	CCATC	4 cut(s)	848, 1562, 1999, 2027
BceAI	ACGGC	2 cut(s)	908, 1038
BciT130I	CCWGG	3 cut(s)	1173, 1581, 1872
BcnI	CCSGG	1 cut(s)	1353
BcoDI	GTCTC	5 cut(s)	633, 1725, 1931, 2141, 2185
BfaI	CTAG	6 cut(s)	323, 636, 696, 785, 1149, 1814
BisI	GCNGC	9 cut(s)	116, 240, 1002, 1047, 1575, 1599, 1665, 1728, 1863
BlsI	GCNGC	9 cut(s)	117, 241, 1003, 1048, 1576, 1600, 1666, 1729, 1864
BmcAI	AGTACT	1 cut(s)	55
Bme1390I	CCNGG	4 cut(s)	1173, 1353, 1581, 1872
Bme18I	GGWCC	5 cut(s)	205, 476, 995, 1130, 1532
BmeT110I	CYCGRG	2 cut(s)	128, 229
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	5 cut(s)	205, 476, 995, 1130, 1532
BmiI	GGNNCC	4 cut(s)	559, 685, 744, 1026
BmrFI	CCNGG	4 cut(s)	1173, 1353, 1581, 1872
BmsI	GCATC	1 cut(s)	178
BmtI	GCTAGC	1 cut(s)	1817
BpiI	GAAGAC	1 cut(s)	1905
BplI	GAGNNNNNCTC	2 cut(s)	2242, 2274
BpmI	CTGGAG	1 cut(s)	741
Bpu14I	TTCGAA	1 cut(s)	1979
BpuEI	CTTGAG	1 cut(s)	2105
BpuMI	CCSGG	1 cut(s)	1353
BsaAI	YACGTR	2 cut(s)	691, 749
BsaI	GGTCTC	3 cut(s)	633, 1725, 2185
BsaJI	CCNNGG	6 cut(s)	933, 1028, 1172, 1351, 1630, 1805
BsaWI	WCCGGW	2 cut(s)	1127, 1564
BsaXI	ACNNNNNCTCC	6 cut(s)	492, 522, 714, 744, 1830, 1860
Bsc4I	CCNNNNNNNGG	4 cut(s)	1139, 1564, 1758, 2120
Bse118I	RCCGGY	2 cut(s)	71, 1127
Bse1I	ACTGG	3 cut(s)	479, 497, 1496
Bse3DI	GCAATG	1 cut(s)	1125
BseBI	CCWGG	3 cut(s)	1173, 1581, 1872
BseDI	CCNNGG	6 cut(s)	933, 1028, 1172, 1351, 1630, 1805
BseGI	GGATG	4 cut(s)	162, 193, 844, 1554
BseLI	CCNNNNNNNGG	4 cut(s)	1139, 1564, 1758, 2120
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	5 cut(s)	41, 69, 444, 548, 1019
BseNI	ACTGG	3 cut(s)	479, 497, 1496
BseSI	GKGCMC	2 cut(s)	745, 1505
BseXI	GCAGC	7 cut(s)	127, 251, 1033, 1586, 1676, 1714, 1849
BsgI	GTGCAG	1 cut(s)	1691
Bsh1236I	CGCG	1 cut(s)	921
Bsh1285I	CGRYCG	1 cut(s)	1630
BshFI	GGCC	3 cut(s)	354, 442, 1842
BshNI	GGYRCC	1 cut(s)	742
BshTI	ACCGGT	1 cut(s)	1127
BsiEI	CGRYCG	1 cut(s)	1630
BsiHKAI	GWGCWC	2 cut(s)	754, 1922
BsiHKCI	CYCGRG	2 cut(s)	128, 229
BsiSI	CCGG	5 cut(s)	72, 305, 1128, 1353, 1565
BslFI	GGGAC	6 cut(s)	241, 356, 739, 1429, 1666, 1905
BslI	CCNNNNNNNGG	4 cut(s)	1139, 1564, 1758, 2120
BsmAI	GTCTC	5 cut(s)	633, 1725, 1931, 2141, 2185
BsmBI	CGTCTC	1 cut(s)	2141
BsmFI	GGGAC	6 cut(s)	241, 356, 739, 1429, 1666, 1905
BsmI	GAATGC	2 cut(s)	941, 2124
BsnI	GGCC	3 cut(s)	354, 442, 1842
Bso31I	GGTCTC	3 cut(s)	633, 1725, 2185
BsoBI	CYCGRG	2 cut(s)	128, 229
Bsp119I	TTCGAA	1 cut(s)	1979
Bsp1286I	GDGCHC	4 cut(s)	745, 754, 1505, 1922
Bsp1407I	TGTACA	2 cut(s)	765, 1122
Bsp143I	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
Bsp19I	CCATGG	1 cut(s)	1028
BspACI	CCGC	5 cut(s)	648, 677, 1001, 1241, 1598
BspANI	GGCC	3 cut(s)	354, 442, 1842
BspCNI	CTCAG	5 cut(s)	42, 70, 443, 547, 1018
BspFNI	CGCG	1 cut(s)	921
BspLI	GGNNCC	4 cut(s)	559, 685, 744, 1026
BspOI	GCTAGC	1 cut(s)	1817
BspPI	GGATC	3 cut(s)	119, 1763, 1814
BspQI	GCTCTTC	1 cut(s)	1698
BspT104I	TTCGAA	1 cut(s)	1979
BspT107I	GGYRCC	1 cut(s)	742
BspTNI	GGTCTC	3 cut(s)	633, 1725, 2185
BsrDI	GCAATG	1 cut(s)	1125
BsrFI	RCCGGY	2 cut(s)	71, 1127
BsrGI	TGTACA	2 cut(s)	765, 1122
BsrI	ACTGG	3 cut(s)	479, 497, 1496
BssAI	RCCGGY	2 cut(s)	71, 1127
BssECI	CCNNGG	6 cut(s)	933, 1028, 1172, 1351, 1630, 1805
BssMI	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
BssT1I	CCWWGG	1 cut(s)	1028
Bst2UI	CCWGG	3 cut(s)	1173, 1581, 1872
Bst6I	CTCTTC	1 cut(s)	1698
BstAPI	GCANNNNNTGC	2 cut(s)	749, 947
BstAUI	TGTACA	2 cut(s)	765, 1122
BstBAI	YACGTR	2 cut(s)	691, 749
BstBI	TTCGAA	1 cut(s)	1979
BstC8I	GCNNGC	4 cut(s)	273, 659, 1551, 1815
BstDEI	CTNAG	6 cut(s)	50, 78, 349, 430, 534, 1005
BstDSI	CCRYGG	2 cut(s)	933, 1028
BstEII	GGTNACC	1 cut(s)	1800
BstF5I	GGATG	4 cut(s)	162, 193, 844, 1554
BstFNI	CGCG	1 cut(s)	921
BstHHI	GCGC	1 cut(s)	923
BstKTI	GATC	7 cut(s)	127, 790, 1067, 1739, 1771, 1822, 2109
BstMAI	GTCTC	5 cut(s)	633, 1725, 1931, 2141, 2185
BstMBI	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
BstMCI	CGRYCG	1 cut(s)	1630
BstMWI	GCNNNNNNNGC	8 cut(s)	654, 674, 749, 758, 929, 938, 947, 1149
BstNI	CCWGG	3 cut(s)	1173, 1581, 1872
BstNSI	RCATGY	4 cut(s)	71, 665, 810, 1918
BstPI	GGTNACC	1 cut(s)	1800
BstSCI	CCNGG	4 cut(s)	1171, 1351, 1579, 1870
BstSLI	GKGCMC	2 cut(s)	745, 1505
BstUI	CGCG	1 cut(s)	921
BstV1I	GCAGC	7 cut(s)	127, 251, 1033, 1586, 1676, 1714, 1849
BstV2I	GAAGAC	1 cut(s)	1905
BstX2I	RGATCY	1 cut(s)	1768
BstXI	CCANNNNNNTGG	1 cut(s)	492
BstYI	RGATCY	1 cut(s)	1768
BsuRI	GGCC	3 cut(s)	354, 442, 1842
BtgI	CCRYGG	2 cut(s)	933, 1028
BtgZI	GCGATG	1 cut(s)	776
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	4 cut(s)	162, 193, 844, 1554
BtsIMutI	CAGTG	6 cut(s)	486, 490, 542, 1047, 1284, 1503
Cac8I	GCNNGC	4 cut(s)	273, 659, 1551, 1815
CaiI	CAGNNNCTG	3 cut(s)	449, 911, 1046
CfoI	GCGC	1 cut(s)	923
Cfr10I	RCCGGY	2 cut(s)	71, 1127
Cfr13I	GGNCC	5 cut(s)	205, 476, 995, 1130, 1532
CseI	GACGC	2 cut(s)	598, 2158
CsiI	ACCWGGT	1 cut(s)	1870
Csp6I	GTAC	3 cut(s)	54, 766, 1123
CspAI	ACCGGT	1 cut(s)	1127
CviQI	GTAC	3 cut(s)	54, 766, 1123
DdeI	CTNAG	6 cut(s)	50, 78, 349, 430, 534, 1005
DpnI	GATC	7 cut(s)	126, 789, 1066, 1738, 1770, 1821, 2108
DpnII	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
DraI	TTTAAA	2 cut(s)	957, 2188
DraIII	CACNNNGTG	2 cut(s)	749, 1373
EaeI	YGGCCR	1 cut(s)	440
Eam1104I	CTCTTC	1 cut(s)	1698
EarI	CTCTTC	1 cut(s)	1698
Eco130I	CCWWGG	1 cut(s)	1028
Eco147I	AGGCCT	2 cut(s)	354, 1842
Eco31I	GGTCTC	3 cut(s)	633, 1725, 2185
Eco32I	GATATC	1 cut(s)	823
Eco47I	GGWCC	5 cut(s)	205, 476, 995, 1130, 1532
Eco57I	CTGAAG	2 cut(s)	306, 471
Eco72I	CACGTG	1 cut(s)	749
Eco88I	CYCGRG	2 cut(s)	128, 229
Eco91I	GGTNACC	1 cut(s)	1800
EcoO109I	RGGNCCY	1 cut(s)	1532
EcoO65I	GGTNACC	1 cut(s)	1800
EcoRII	CCWGG	3 cut(s)	1171, 1579, 1870
EcoRV	GATATC	1 cut(s)	823
EcoT14I	CCWWGG	1 cut(s)	1028
EcoT22I	ATGCAT	1 cut(s)	852
ErhI	CCWWGG	1 cut(s)	1028
Esp3I	CGTCTC	1 cut(s)	2141
FalI	AAGNNNNNCTT	4 cut(s)	2167, 2199, 2230, 2262
FaqI	GGGAC	6 cut(s)	241, 356, 739, 1429, 1666, 1905
FauI	CCCGC	2 cut(s)	670, 1234
FblI	GTMKAC	1 cut(s)	426
Fnu4HI	GCNGC	9 cut(s)	116, 240, 1002, 1047, 1575, 1599, 1665, 1728, 1863
FokI	GGATG	4 cut(s)	169, 200, 851, 1541
Fsp4HI	GCNGC	9 cut(s)	116, 240, 1002, 1047, 1575, 1599, 1665, 1728, 1863
FspBI	CTAG	6 cut(s)	323, 636, 696, 785, 1149, 1814
GlaI	GCGC	1 cut(s)	922
GluI	GCNGC	9 cut(s)	116, 240, 1002, 1047, 1575, 1599, 1665, 1728, 1863
GsuI	CTGGAG	1 cut(s)	741
HaeIII	GGCC	3 cut(s)	354, 442, 1842
HapII	CCGG	5 cut(s)	72, 305, 1128, 1353, 1565
HgaI	GACGC	2 cut(s)	598, 2158
HhaI	GCGC	1 cut(s)	923
Hin6I	GCGC	1 cut(s)	921
HinP1I	GCGC	1 cut(s)	921
HincII	GTYRAC	1 cut(s)	1402
HindII	GTYRAC	1 cut(s)	1402
HindIII	AAGCTT	6 cut(s)	245, 269, 548, 598, 771, 2239
HpaII	CCGG	5 cut(s)	72, 305, 1128, 1353, 1565
HphI	GGTGA	7 cut(s)	119, 413, 1211, 1359, 1741, 1794, 2047
Hpy166II	GTNNAC	6 cut(s)	91, 295, 427, 1125, 1159, 1402
Hpy188I	TCNGA	6 cut(s)	156, 336, 451, 1008, 1809, 1961
Hpy8I	GTNNAC	6 cut(s)	91, 295, 427, 1125, 1159, 1402
Hpy99I	CGWCG	2 cut(s)	365, 592
HpyAV	CCTTC	4 cut(s)	1306, 1482, 1790, 2025
HpyCH4IV	ACGT	6 cut(s)	297, 690, 748, 1276, 1438, 2073
HpyF10VI	GCNNNNNNNGC	8 cut(s)	654, 674, 749, 758, 929, 938, 947, 1149
HpyF3I	CTNAG	6 cut(s)	50, 78, 349, 430, 534, 1005
HpySE526I	ACGT	6 cut(s)	297, 690, 748, 1276, 1438, 2073
HspAI	GCGC	1 cut(s)	921
Kzo9I	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
LguI	GCTCTTC	1 cut(s)	1698
LmnI	GCTCC	4 cut(s)	557, 938, 1030, 1672
Lsp1109I	GCAGC	7 cut(s)	127, 251, 1033, 1586, 1676, 1714, 1849
LweI	GCATC	1 cut(s)	178
MabI	ACCWGGT	1 cut(s)	1870
MaeI	CTAG	6 cut(s)	323, 636, 696, 785, 1149, 1814
MaeII	ACGT	6 cut(s)	297, 690, 748, 1276, 1438, 2073
MalI	GATC	7 cut(s)	126, 789, 1066, 1738, 1770, 1821, 2108
MboI	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
MboII	GAAGA	7 cut(s)	16, 371, 416, 1388, 1474, 1685, 1910
MfeI	CAATTG	1 cut(s)	1542
MflI	RGATCY	1 cut(s)	1768
MhlI	GDGCHC	4 cut(s)	745, 754, 1505, 1922
MlsI	TGGCCA	1 cut(s)	442
MluCI	AATT	7 cut(s)	21, 36, 520, 1335, 1537, 1542, 2298
MluNI	TGGCCA	1 cut(s)	442
MlyI	GAGTC	3 cut(s)	422, 2096, 2249
MmeI	TCCRAC	3 cut(s)	1468, 1939, 2056
Mox20I	TGGCCA	1 cut(s)	442
Mph1103I	ATGCAT	1 cut(s)	852
MroXI	GAANNNNTTC	1 cut(s)	291
MscI	TGGCCA	1 cut(s)	442
MseI	TTAA	6 cut(s)	20, 459, 956, 2007, 2160, 2187
MslI	CAYNNNNRTG	4 cut(s)	72, 395, 855, 2129
Msp20I	TGGCCA	1 cut(s)	442
MspI	CCGG	5 cut(s)	72, 305, 1128, 1353, 1565
MspR9I	CCNGG	4 cut(s)	1173, 1353, 1581, 1872
MunI	CAATTG	1 cut(s)	1542
Mva1269I	GAATGC	2 cut(s)	941, 2124
MvaI	CCWGG	3 cut(s)	1173, 1581, 1872
MvnI	CGCG	1 cut(s)	921
MwoI	GCNNNNNNNGC	8 cut(s)	654, 674, 749, 758, 929, 938, 947, 1149
NciI	CCSGG	1 cut(s)	1353
NcoI	CCATGG	1 cut(s)	1028
NdeII	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
NheI	GCTAGC	1 cut(s)	1813
NlaIV	GGNNCC	4 cut(s)	559, 685, 744, 1026
NsiI	ATGCAT	1 cut(s)	852
NspI	RCATGY	4 cut(s)	71, 665, 810, 1918
NspV	TTCGAA	1 cut(s)	1979
PceI	AGGCCT	2 cut(s)	354, 1842
PciI	ACATGT	2 cut(s)	806, 1914
PciSI	GCTCTTC	1 cut(s)	1698
PcsI	WCGNNNNNNNCGW	1 cut(s)	126
PctI	GAATGC	2 cut(s)	941, 2124
PdmI	GAANNNNTTC	1 cut(s)	291
PfeI	GAWTC	7 cut(s)	143, 446, 614, 1168, 1635, 1849, 1981
PflMI	CCANNNNNTGG	2 cut(s)	1139, 1758
PinAI	ACCGGT	1 cut(s)	1127
PkrI	GCNGC	9 cut(s)	117, 241, 1003, 1048, 1576, 1600, 1666, 1729, 1864
PleI	GAGTC	3 cut(s)	422, 2095, 2249
PmaCI	CACGTG	1 cut(s)	749
PmlI	CACGTG	1 cut(s)	749
PpsI	GAGTC	3 cut(s)	422, 2095, 2249
Ppu21I	YACGTR	2 cut(s)	691, 749
PpuMI	RGGWCCY	1 cut(s)	1532
PscI	ACATGT	2 cut(s)	806, 1914
Psp1406I	AACGTT	1 cut(s)	2073
Psp5II	RGGWCCY	1 cut(s)	1532
Psp6I	CCWGG	3 cut(s)	1171, 1579, 1870
PspCI	CACGTG	1 cut(s)	749
PspEI	GGTNACC	1 cut(s)	1800
PspGI	CCWGG	3 cut(s)	1171, 1579, 1870
PspN4I	GGNNCC	4 cut(s)	559, 685, 744, 1026
PspPI	GGNCC	5 cut(s)	205, 476, 995, 1130, 1532
PspPPI	RGGWCCY	1 cut(s)	1532
PstNI	CAGNNNCTG	3 cut(s)	449, 911, 1046
PsuI	RGATCY	1 cut(s)	1768
RsaI	GTAC	3 cut(s)	55, 767, 1124
RsaNI	GTAC	3 cut(s)	54, 766, 1123
RseI	CAYNNNNRTG	4 cut(s)	72, 395, 855, 2129
SapI	GCTCTTC	1 cut(s)	1698
SaqAI	TTAA	6 cut(s)	20, 459, 956, 2007, 2160, 2187
SatI	GCNGC	9 cut(s)	116, 240, 1002, 1047, 1575, 1599, 1665, 1728, 1863
Sau3AI	GATC	7 cut(s)	124, 787, 1064, 1736, 1768, 1819, 2106
Sau96I	GGNCC	5 cut(s)	205, 476, 995, 1130, 1532
ScaI	AGTACT	1 cut(s)	55
SchI	GAGTC	3 cut(s)	422, 2096, 2249
ScrFI	CCNGG	4 cut(s)	1173, 1353, 1581, 1872
SduI	GDGCHC	4 cut(s)	745, 754, 1505, 1922
SexAI	ACCWGGT	1 cut(s)	1870
SfaNI	GCATC	1 cut(s)	178
SfuI	TTCGAA	1 cut(s)	1979
SinI	GGWCC	5 cut(s)	205, 476, 995, 1130, 1532
SmiMI	CAYNNNNRTG	4 cut(s)	72, 395, 855, 2129
SmlI	CTYRAG	1 cut(s)	2084
SmoI	CTYRAG	1 cut(s)	2084
Sse9I	AATT	7 cut(s)	21, 36, 520, 1335, 1537, 1542, 2298
SseBI	AGGCCT	2 cut(s)	354, 1842
SsiI	CCGC	5 cut(s)	648, 677, 1001, 1241, 1598
SspMI	CTAG	6 cut(s)	323, 636, 696, 785, 1149, 1814
StuI	AGGCCT	2 cut(s)	354, 1842
StyD4I	CCNGG	4 cut(s)	1171, 1351, 1579, 1870
StyI	CCWWGG	1 cut(s)	1028
TaiI	ACGT	6 cut(s)	300, 693, 751, 1279, 1441, 2076
TaqI	TCGA	3 cut(s)	1979, 2109, 2201
TaqII	GACCGA	3 cut(s)	1077, 1644, 2080
TasI	AATT	7 cut(s)	21, 36, 520, 1335, 1537, 1542, 2298
TatI	WGTACW	3 cut(s)	53, 765, 1122
TauI	GCSGC	2 cut(s)	1004, 1601
TfiI	GAWTC	7 cut(s)	143, 446, 614, 1168, 1635, 1849, 1981
Tru1I	TTAA	6 cut(s)	20, 459, 956, 2007, 2160, 2187
Tru9I	TTAA	6 cut(s)	20, 459, 956, 2007, 2160, 2187
TscAI	CASTG	6 cut(s)	486, 497, 542, 1047, 1291, 1503
TseI	GCWGC	7 cut(s)	115, 239, 1046, 1574, 1664, 1727, 1862
TspDTI	ATGAA	6 cut(s)	17, 559, 801, 855, 1627, 2058
TspGWI	ACGGA	3 cut(s)	155, 349, 1812
TspRI	CASTG	6 cut(s)	486, 497, 542, 1047, 1291, 1503
Van91I	CCANNNNNTGG	2 cut(s)	1139, 1758
VpaK11BI	GGWCC	5 cut(s)	205, 476, 995, 1130, 1532
XapI	RAATTY	2 cut(s)	520, 2298
XbaI	TCTAGA	1 cut(s)	784
XceI	RCATGY	4 cut(s)	71, 665, 810, 1918
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1234
XmiI	GTMKAC	1 cut(s)	426
XmnI	GAANNNNTTC	1 cut(s)	291
XspI	CTAG	6 cut(s)	323, 636, 696, 785, 1149, 1814
ZrmI	AGTACT	1 cut(s)	55
Zsp2I	ATGCAT	1 cut(s)	852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.