Rh7CG089100

subtilisin-like protease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001127
Physical Location & Seq
Forward (+)
6726251 .. 6728324
2074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG089100.1

Sequence Viewer

Length: 690 bp
ATGAAGAAGAGCAACAAAGTTCCACTGTTTGTGACATTCAATCTTTTCTTAGTCCTCTGTAGCCAAACCATCATAATTAGGACGGTGGATGCCAAGAGTAAAGTTCACATAGTCTATATGGGTAAAAAGCACCACCATGATCCTGAGGTTGTAACCTGTTTGCATCACGACATGCTTGCCTCTGTTATGGGGAGCAAAGAAGCAGCAACTGATGCTATGGTGTACAGTTACAAACATGGATTTTCTGGTTTTGCAGCTAAATTTACAGAATCTCAAGCTAAGAAGATTGCAGAGGTTGATGACCGCGATGCAATTTCCATTGGTTCATTCCATGCTGTCACTAAAGGCATACCTGTTGTTGGTGGAGCTGCAAATGAAGGACCTTCTGCATACACTGTCGAAAACACAGCACCTTGGATCTTAACTGTAGCAGCTTCTACTATAGATCGGTCTTTTCCTACAAATATTACACTAGGGAACAACTCAACCATACTGGGTCAAGCCCTGTTTGCAGGAACGGAAGTTGACTTTACTGGTTTGGTGTACCCGGAGAACCCAGGACTTATTCCTTCACTAGCCGGCGTCTGTGAGGCTCTTATACTCAATAACACACCTGTGGCTGGAAATGTAGTCCTTTGCTTTACATCAGTGGCCAGAAGAACTCCGGCCGGTAGCACTTGCTGTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 PA Peptidase_S8

Protein Analysis

229

Amino Acids

24.3

Weight (kDa)

7.07

Isoelectric Point (pI)

26.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 35 - 101 1.7e-15 Peptidase inhibitor I9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 306
AciI CCGC 1 cut(s) 304
AclWI GGATC 2 cut(s) 134, 425
AcoI YGGCCR 2 cut(s) 651, 666
AcsI RAATTY 1 cut(s) 260
AcyI GRCGYC 1 cut(s) 582
AfaI GTAC 2 cut(s) 224, 545
AfiI CCNNNNNNNGG 2 cut(s) 359, 620
AgsI TTSAA 1 cut(s) 40
AjnI CCWGG 1 cut(s) 556
AleI CACNNNNGTG 1 cut(s) 614
AluBI AGCT 5 cut(s) 257, 278, 368, 434, 687
AluI AGCT 5 cut(s) 257, 278, 368, 434, 687
AlwI GGATC 2 cut(s) 134, 425
AlwNI CAGNNNCTG 1 cut(s) 209
AoxI GGCC 2 cut(s) 651, 666
ApeKI GCWGC 4 cut(s) 203, 254, 368, 431
ApoI RAATTY 1 cut(s) 260
AspS9I GGNCC 1 cut(s) 380
AsuC2I CCSGG 1 cut(s) 548
AvaII GGWCC 1 cut(s) 380
AxyI CCTNAGG 1 cut(s) 144
BalI TGGCCA 1 cut(s) 653
BbvI GCAGC 4 cut(s) 215, 266, 355, 443
BccI CCATC 1 cut(s) 77
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 1 cut(s) 558
BcnI CCSGG 1 cut(s) 548
BfaI CTAG 3 cut(s) 473, 575, 688
BfmI CTRYAG 4 cut(s) 58, 426, 441, 682
BisI GCNGC 4 cut(s) 204, 255, 369, 432
BlsI GCNGC 4 cut(s) 205, 256, 370, 433
Bme1390I CCNGG 2 cut(s) 548, 558
Bme18I GGWCC 1 cut(s) 380
BmgT120I GGNCC 1 cut(s) 380
BmrFI CCNGG 2 cut(s) 548, 558
BmrI ACTGGG 1 cut(s) 503
BmsI GCATC 4 cut(s) 79, 172, 202, 298
BmuI ACTGGG 1 cut(s) 503
BpuEI CTTGAG 1 cut(s) 258
BpuMI CCSGG 1 cut(s) 548
BsaHI GRCGYC 1 cut(s) 582
BsaJI CCNNGG 2 cut(s) 413, 556
Bsc4I CCNNNNNNNGG 2 cut(s) 359, 620
Bse118I RCCGGY 2 cut(s) 578, 668
Bse1I ACTGG 2 cut(s) 498, 538
Bse21I CCTNAGG 1 cut(s) 144
BseBI CCWGG 1 cut(s) 558
BseDI CCNNGG 2 cut(s) 413, 556
BseGI GGATG 1 cut(s) 94
BseLI CCNNNNNNNGG 2 cut(s) 359, 620
BseMII CTCAG 1 cut(s) 135
BseNI ACTGG 2 cut(s) 498, 538
BseX3I CGGCCG 1 cut(s) 666
BseXI GCAGC 4 cut(s) 215, 266, 355, 443
Bsh1236I CGCG 1 cut(s) 306
Bsh1285I CGRYCG 1 cut(s) 669
BshFI GGCC 2 cut(s) 653, 668
BsiEI CGRYCG 1 cut(s) 669
BsiSI CCGG 4 cut(s) 548, 579, 665, 669
BslI CCNNNNNNNGG 2 cut(s) 359, 620
BsnI GGCC 2 cut(s) 653, 668
Bsp1407I TGTACA 1 cut(s) 222
Bsp143I GATC 3 cut(s) 139, 417, 445
BspACI CCGC 1 cut(s) 304
BspANI GGCC 2 cut(s) 653, 668
BspCNI CTCAG 1 cut(s) 136
BspFNI CGCG 1 cut(s) 306
BspPI GGATC 2 cut(s) 134, 425
BspQI GCTCTTC 1 cut(s) 2
BsrFI RCCGGY 2 cut(s) 578, 668
BsrGI TGTACA 1 cut(s) 222
BsrI ACTGG 2 cut(s) 498, 538
BssAI RCCGGY 2 cut(s) 578, 668
BssECI CCNNGG 2 cut(s) 413, 556
BssMI GATC 3 cut(s) 139, 417, 445
BssNI GRCGYC 1 cut(s) 582
BssT1I CCWWGG 1 cut(s) 413
Bst2UI CCWGG 1 cut(s) 558
Bst4CI ACNGT 5 cut(s) 27, 85, 227, 397, 427
Bst6I CTCTTC 1 cut(s) 2
BstACI GRCGYC 1 cut(s) 582
BstAPI GCANNNNNTGC 1 cut(s) 212
BstAUI TGTACA 1 cut(s) 222
BstC8I GCNNGC 2 cut(s) 177, 580
BstDEI CTNAG 3 cut(s) 49, 144, 279
BstF5I GGATG 1 cut(s) 94
BstFNI CGCG 1 cut(s) 306
BstKTI GATC 3 cut(s) 142, 420, 448
BstMBI GATC 3 cut(s) 139, 417, 445
BstMCI CGRYCG 1 cut(s) 669
BstMWI GCNNNNNNNGC 2 cut(s) 212, 509
BstNI CCWGG 1 cut(s) 558
BstNSI RCATGY 1 cut(s) 175
BstSCI CCNGG 2 cut(s) 546, 556
BstSFI CTRYAG 4 cut(s) 58, 426, 441, 682
BstUI CGCG 1 cut(s) 306
BstV1I GCAGC 4 cut(s) 215, 266, 355, 443
BstX2I RGATCY 1 cut(s) 417
BstYI RGATCY 1 cut(s) 417
BstZI CGGCCG 1 cut(s) 666
Bsu36I CCTNAGG 1 cut(s) 144
BsuRI GGCC 2 cut(s) 653, 668
BtgZI GCGATG 1 cut(s) 321
BtsCI GGATG 1 cut(s) 94
BtsIMutI CAGTG 3 cut(s) 23, 393, 654
Cac8I GCNNGC 2 cut(s) 177, 580
CaiI CAGNNNCTG 1 cut(s) 209
Cfr10I RCCGGY 2 cut(s) 578, 668
Cfr13I GGNCC 1 cut(s) 380
CseI GACGC 1 cut(s) 571
Csp6I GTAC 2 cut(s) 223, 544
CviAII CATG 4 cut(s) 137, 172, 236, 332
CviQI GTAC 2 cut(s) 223, 544
DdeI CTNAG 3 cut(s) 49, 144, 279
DpnI GATC 3 cut(s) 141, 419, 447
DpnII GATC 3 cut(s) 139, 417, 445
EaeI YGGCCR 2 cut(s) 651, 666
EagI CGGCCG 1 cut(s) 666
Eam1104I CTCTTC 1 cut(s) 2
EarI CTCTTC 1 cut(s) 2
EclXI CGGCCG 1 cut(s) 666
Eco130I CCWWGG 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 380
Eco52I CGGCCG 1 cut(s) 666
Eco81I CCTNAGG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 380
EcoRII CCWGG 1 cut(s) 556
EcoT14I CCWWGG 1 cut(s) 413
ErhI CCWWGG 1 cut(s) 413
FaeI CATG 4 cut(s) 140, 175, 239, 335
FatI CATG 4 cut(s) 136, 171, 235, 331
Fnu4HI GCNGC 4 cut(s) 204, 255, 369, 432
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 4 cut(s) 204, 255, 369, 432
FspBI CTAG 3 cut(s) 473, 575, 688
GluI GCNGC 4 cut(s) 204, 255, 369, 432
HaeIII GGCC 2 cut(s) 653, 668
HapII CCGG 4 cut(s) 548, 579, 665, 669
HgaI GACGC 1 cut(s) 571
Hin1I GRCGYC 1 cut(s) 582
Hin1II CATG 4 cut(s) 140, 175, 239, 335
HincII GTYRAC 1 cut(s) 526
HindII GTYRAC 1 cut(s) 526
HinfI GANTC 1 cut(s) 269
HpaII CCGG 4 cut(s) 548, 579, 665, 669
Hpy166II GTNNAC 4 cut(s) 106, 223, 526, 544
Hpy188III TCNNGA 2 cut(s) 143, 167
Hpy8I GTNNAC 4 cut(s) 106, 223, 526, 544
HpyAV CCTTC 3 cut(s) 371, 393, 579
HpyCH4III ACNGT 5 cut(s) 27, 85, 227, 397, 427
HpyCH4V TGCA 7 cut(s) 163, 254, 290, 311, 371, 389, 512
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 509
HpyF3I CTNAG 3 cut(s) 49, 144, 279
Hsp92I GRCGYC 1 cut(s) 582
Hsp92II CATG 4 cut(s) 140, 175, 239, 335
KroI GCCGGC 1 cut(s) 578
KroNI GCCGGC 1 cut(s) 580
Kzo9I GATC 3 cut(s) 139, 417, 445
LguI GCTCTTC 1 cut(s) 2
LmnI GCTCC 2 cut(s) 192, 365
Lsp1109I GCAGC 4 cut(s) 215, 266, 355, 443
LweI GCATC 4 cut(s) 79, 172, 202, 298
MaeI CTAG 3 cut(s) 473, 575, 688
MaeIII GTNAC 4 cut(s) 31, 151, 227, 337
MalI GATC 3 cut(s) 141, 419, 447
MboI GATC 3 cut(s) 139, 417, 445
MboII GAAGA 4 cut(s) 16, 19, 295, 669
MflI RGATCY 1 cut(s) 417
MlsI TGGCCA 1 cut(s) 653
MluCI AATT 3 cut(s) 75, 260, 312
MluNI TGGCCA 1 cut(s) 653
MnlI CCTC 5 cut(s) 65, 139, 190, 286, 583
Mox20I TGGCCA 1 cut(s) 653
MroNI GCCGGC 1 cut(s) 578
MscI TGGCCA 1 cut(s) 653
MseI TTAA 1 cut(s) 422
MslI CAYNNNNRTG 2 cut(s) 135, 614
Msp20I TGGCCA 1 cut(s) 653
MspI CCGG 4 cut(s) 548, 579, 665, 669
MspR9I CCNGG 2 cut(s) 548, 558
MvaI CCWGG 1 cut(s) 558
MvnI CGCG 1 cut(s) 306
MwoI GCNNNNNNNGC 2 cut(s) 212, 509
NaeI GCCGGC 1 cut(s) 580
NciI CCSGG 1 cut(s) 548
NdeII GATC 3 cut(s) 139, 417, 445
NgoMIV GCCGGC 1 cut(s) 578
NlaIII CATG 4 cut(s) 140, 175, 239, 335
NmuCI GTSAC 2 cut(s) 31, 337
NspI RCATGY 1 cut(s) 175
OliI CACNNNNGTG 1 cut(s) 614
PciSI GCTCTTC 1 cut(s) 2
PdiI GCCGGC 1 cut(s) 580
PfeI GAWTC 1 cut(s) 269
PkrI GCNGC 4 cut(s) 205, 256, 370, 433
PpuMI RGGWCCY 1 cut(s) 380
Psp5II RGGWCCY 1 cut(s) 380
Psp6I CCWGG 1 cut(s) 556
PspGI CCWGG 1 cut(s) 556
PspPI GGNCC 1 cut(s) 380
PspPPI RGGWCCY 1 cut(s) 380
PstNI CAGNNNCTG 1 cut(s) 209
PsuI RGATCY 1 cut(s) 417
RsaI GTAC 2 cut(s) 224, 545
RsaNI GTAC 2 cut(s) 223, 544
RseI CAYNNNNRTG 2 cut(s) 135, 614
SapI GCTCTTC 1 cut(s) 2
SaqAI TTAA 1 cut(s) 422
SatI GCNGC 4 cut(s) 204, 255, 369, 432
Sau3AI GATC 3 cut(s) 139, 417, 445
Sau96I GGNCC 1 cut(s) 380
ScrFI CCNGG 2 cut(s) 548, 558
SfaNI GCATC 4 cut(s) 79, 172, 202, 298
SfcI CTRYAG 4 cut(s) 58, 426, 441, 682
SinI GGWCC 1 cut(s) 380
SmiMI CAYNNNNRTG 2 cut(s) 135, 614
SmlI CTYRAG 1 cut(s) 273
SmoI CTYRAG 1 cut(s) 273
Sse9I AATT 3 cut(s) 75, 260, 312
SsiI CCGC 1 cut(s) 304
SspI AATATT 1 cut(s) 466
SspMI CTAG 3 cut(s) 473, 575, 688
StyD4I CCNGG 2 cut(s) 546, 556
StyI CCWWGG 1 cut(s) 413
TaaI ACNGT 5 cut(s) 27, 85, 227, 397, 427
TaqI TCGA 1 cut(s) 399
TaqII GACCGA 1 cut(s) 438
TasI AATT 3 cut(s) 75, 260, 312
TatI WGTACW 1 cut(s) 222
TfiI GAWTC 1 cut(s) 269
Tru1I TTAA 1 cut(s) 422
Tru9I TTAA 1 cut(s) 422
TscAI CASTG 3 cut(s) 30, 400, 654
TseFI GTSAC 2 cut(s) 31, 337
TseI GCWGC 4 cut(s) 203, 254, 368, 431
Tsp45I GTSAC 2 cut(s) 31, 337
TspDTI ATGAA 3 cut(s) 17, 315, 390
TspGWI ACGGA 1 cut(s) 533
TspRI CASTG 3 cut(s) 30, 400, 654
VpaK11BI GGWCC 1 cut(s) 380
XapI RAATTY 1 cut(s) 260
XceI RCATGY 1 cut(s) 175
XspI CTAG 3 cut(s) 473, 575, 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.