Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001127

Physical Location & Seq

Genomic Coordinates Forward (+)

6687592 .. 6691437

Gene Structure 3846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG088100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGGTGATGGAGTTATCGTAGGTGTCCTTGACACAGGTATATGGCCAGAGTCTAAATCTTTCAATGAAGAAGGCCTAGGGCCAGTTCCATCCCACTGGAAGGGTATCTGTGAATCTGGTGAAAAATTTAATGCCACATTGCATTGCAATAGAAAAATCATCGGAGCACGTTGGTTCAACGATGGAATACTTGCTGAGTATGGACAGCCGTTGAACACATCTGAAAGAACTGAATTCATGTCCCCAAGAGATGCACATGGACATGGCACTCACACTGCTAGCACTGCAGCCGGTTCTTTTGTGACTAATGTTAGTTACAAGGGCCTTGGTCATGGGACAGTTAGAGGGGGTGCCCCAAATGCTCGATTGGCCGTTTACAAGGTTTGCTGGAATGTGCTTGGCGGTCAATGCTCAGGAGCTGATATGCTCAAAGCTTTTGATGAAGCCATACATGATGGAGTTGATGTGTTGTCACTCTCGATTGGGGGTTCAGTTCCACTCTATTCGGATGTGGATGAACGTGATGGCATTGCTACTGGCTCCTTTCATGCTGTGGCCAGGGGAATTACTGTTGTTTGTGCAGCTGCAAATGATGGACCTTCGGCGCAGACAGTTCAGAACACATCACCTTGGATCATAACTGTTGCAGCAAGCACCACGGATCGAGCATTTCCTACTTCCCTAACTTTAGGAAATAACAAAACTTTCCTGGGTCAAGCTATGTTTACAGGACTTGAGATTGGTTTTACAAGCTTGATATATCCGGAGTCTGGAGGGCTTGAACCTACTGCTACAGGTGTCTGTGAATCCCTCTCACTTAACAAAACCATGGTATCTGGAAAGGTGGTTCTATGCTTCACTTCACTCGGTCGTAGGAGAGCTGTAACAAGTGCTTCAGCTGCTGTGAAAGAAGCTGGCGGTGTTGGCCTAATCGTAGCAAAGAATCCAACTGATGGCTTGTATCCATGTACTGATGACTTTCCTTGTATTGAAGTTGACTATGAGATAGGCACCCGAATAGTGTTTTATATCCGATCTACCAGATATCCTCTTGTGAAGTTGAACCGTTCTAAAACAATTGCGGGCAAGCCAATATTAGCCAGGGTTGCCTATTTTTCATCTCGGGGACCAAACTCCGCAGCACCAGCAATTCTCAAGCCAGATATAGCTGCGCCTGGTGTGAACATATTGGCTGCAACTTCTCCACTGGATTCATTTGTGGATGCTGGATATGTCATGCACTCGGGAACATCGATGGCAACTCCTCATGTCTCAGGCATTGTGGCTCTCCTCAAAGCAGTGCATCCTAATTGGTCTCCAGCAGCCATTCGATCAGCACTAGTCACAAGTGCATGGAGGAATGGTCCATCTGGTTTACCAATTTTTGCCGAGGGATCTCCTCAAAAGTTGACCAATCCTTTCGACTTTGGAGGTGGCATTGTGCACCCGAATGCAGCAGCAAACCCGGGTCTTGTATATGACATGGGTGCAGCAGACTACATGCATTATCTATGTGCCATGGGCTACAACAACTCTGCCATATCAAGGCTCACAGGCCAAACCACAACATGTCCCATAATGAGACCTTCTATTTTGGACATTAACCTACCTTCCATAACCATACCAAGCCTCAGACATTCCATTACTGTAACAAGAACTGTCACAAATGTAGGAGACTCTAAATCCGTTTATGAAGCTACAATTGATCCTCCATTGGGAACAATGGTATCTGTAAAACCCAATCCTTTGGTATTCAACTCCACGGTTCAGAAACTCACTTTCGAGATTACAATTTCCACAACCCACCAGATGAACACAGGGTACTACTTTGGAAGCCTTACATGGACTGATAGAGTGCATGCTGTGAGAATTCCGTTGTCTGTGAGGACAGACTTTTTACAACATTTTGCTGATGATCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

640

Amino Acids

67.8

Weight (kDa)

6.8

Isoelectric Point (pI)

30.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	2 - 456	4.6e-47	Subtilase family
fn3_6	PF17766	533 - 628	7.7e-30	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001127)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32940 AT1G32940 AT1G32940 AT1G32940 AT1G32950 AT1G32950 AT1G32960 AT4G10510 AT4G10510 AT4G10510 AT4G10510 AT4G10520 AT4G10530 AT4G10540 AT4G10550 AT4G10550 AT4G10550 AT4G10550
fragaria_vesca	FvH4_5g10490 FvH4_5g10502
malus_domestica	MD00G1035000.v1.1
prunus_persica	Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133500_v2.0.a1 Prupe.5G133600_v2.0.a1 Prupe.5G133700_v2.0.a1
pyrus_communis	pycom01g12030 pycom14g11430 pycom14g11440 pycom14g11450 pycom14g11470 pycom14g11480 pycom14g11520
rosa_chinensis	RchiOBHm_Chr4g0389671 RchiOBHm_Chr7g0187621 RchiOBHm_Chr7g0187651
rosa_laevigata	RLG00000004761 RLG00000004765
rosa_multiflora	Rmu_sc0003144.1_g000021 Rmu_sc0004483.1_g000012 Rmu_ssc0000110.1_g000014
rosa_roxburghii	Rroxscaffold_3G00267240
rosa_rugosa	Rorug06G0483200
rosa_samantha	Rh4AG029600 Rh4BG022700 Rh7AG088100 Rh7AG088500 Rh7BG089400 Rh7BG089900 Rh7BG090200 Rh7CG088700 Rh7CG089100 Rh7DG090400 Rh7DG090700
rosa_wichuraiana	Rw0G002650 Rw4G002200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	350, 1010
AccB7I	CCANNNNNTGG	1 cut(s)	953
AccIII	TCCGGA	1 cut(s)	763
AciI	CCGC	4 cut(s)	402, 918, 1082, 1137
AclWI	GGATC	4 cut(s)	641, 669, 1402, 1700
AcoI	YGGCCR	3 cut(s)	44, 369, 555
AcsI	RAATTY	3 cut(s)	125, 233, 1869
AcuI	CTGAAG	1 cut(s)	879
AfaI	GTAC	2 cut(s)	970, 1823
AfiI	CCNNNNNNNGG	5 cut(s)	100, 770, 953, 1545, 1715
AflIII	ACRYGT	1 cut(s)	1568
AgsI	TTSAA	7 cut(s)	64, 178, 214, 782, 992, 1063, 1756
AhlI	ACTAGT	1 cut(s)	1339
AjnI	CCWGG	4 cut(s)	557, 708, 1100, 1174
AloI	GAACNNNNNNTCC	2 cut(s)	831, 863
Alw21I	GWGCWC	2 cut(s)	169, 1446
Alw26I	GTCTC	4 cut(s)	1276, 1320, 1576, 1668
Alw44I	GTGCAC	1 cut(s)	1442
AlwI	GGATC	4 cut(s)	641, 669, 1402, 1700
AlwNI	CAGNNNCTG	2 cut(s)	419, 902
Ama87I	CYCGRG	3 cut(s)	1122, 1243, 1465
Aor13HI	TCCGGA	1 cut(s)	763
AoxI	GGCC	8 cut(s)	44, 73, 80, 322, 369, 555, 925, 1555
ApaLI	GTGCAC	1 cut(s)	1442
ApoI	RAATTY	3 cut(s)	125, 233, 1869
AspA2I	CCTAGG	1 cut(s)	76
AspLEI	GCGC	2 cut(s)	607, 1174
AspS9I	GGNCC	5 cut(s)	80, 322, 596, 1127, 1364
AsuC2I	CCSGG	2 cut(s)	1466, 1467
AsuHPI	GGTGA	3 cut(s)	17, 131, 618
AsuNHI	GCTAGC	1 cut(s)	278
AvaI	CYCGRG	3 cut(s)	1122, 1243, 1465
AvaII	GGWCC	3 cut(s)	596, 1127, 1364
AvrII	CCTAGG	1 cut(s)	76
BaeGI	GKGCMC	2 cut(s)	355, 1446
BaeI	ACNNNNGTAYC	4 cut(s)	816, 849, 1710, 1743
BalI	TGGCCA	2 cut(s)	46, 557
BanI	GGYRCC	2 cut(s)	350, 1010
Bbv12I	GWGCWC	2 cut(s)	169, 1446
BccI	CCATC	9 cut(s)	2, 97, 176, 449, 518, 587, 947, 1249, 1375
BceAI	ACGGC	2 cut(s)	193, 356
BciT130I	CCWGG	4 cut(s)	559, 710, 1102, 1176
BciVI	GTATCC	1 cut(s)	972
BclI	TGATCA	1 cut(s)	1915
BcnI	CCSGG	2 cut(s)	1466, 1467
BcoDI	GTCTC	4 cut(s)	1276, 1320, 1576, 1668
BcuI	ACTAGT	1 cut(s)	1339
BfaI	CTAG	3 cut(s)	77, 279, 1340
BfmI	CTRYAG	2 cut(s)	285, 792
BfuI	GTATCC	1 cut(s)	972
BlnI	CCTAGG	1 cut(s)	76
Bme1390I	CCNGG	6 cut(s)	559, 710, 1102, 1176, 1466, 1467
Bme18I	GGWCC	3 cut(s)	596, 1127, 1364
BmeT110I	CYCGRG	3 cut(s)	1122, 1243, 1465
BmgT120I	GGNCC	5 cut(s)	80, 322, 596, 1127, 1364
BmiI	GGNNCC	4 cut(s)	352, 541, 1012, 1128
BmrFI	CCNGG	6 cut(s)	559, 710, 1102, 1176, 1466, 1467
BmsI	GCATC	3 cut(s)	241, 1213, 1312
BmtI	GCTAGC	1 cut(s)	282
BpmI	CTGGAG	2 cut(s)	792, 1302
Bpu10I	CCTNAGC	1 cut(s)	412
BpuEI	CTTGAG	2 cut(s)	755, 1139
BpuMI	CCSGG	2 cut(s)	1466, 1467
Bsa29I	ATCGAT	1 cut(s)	1253
BsaI	GGTCTC	2 cut(s)	1320, 1576
BsaWI	WCCGGW	1 cut(s)	763
BsaXI	ACNNNNNCTCC	5 cut(s)	33, 450, 480, 1348, 1378
Bsc4I	CCNNNNNNNGG	5 cut(s)	100, 770, 953, 1545, 1715
Bse118I	RCCGGY	1 cut(s)	290
Bse1I	ACTGG	4 cut(s)	83, 101, 541, 1212
Bse3DI	GCAATG	3 cut(s)	137, 142, 528
BseAI	TCCGGA	1 cut(s)	763
BseBI	CCWGG	4 cut(s)	559, 710, 1102, 1176
BseCI	ATCGAT	1 cut(s)	1253
BseGI	GGATG	5 cut(s)	89, 514, 520, 1228, 1303
BseLI	CCNNNNNNNGG	5 cut(s)	100, 770, 953, 1545, 1715
BseMI	GCAATG	3 cut(s)	137, 142, 528
BseMII	CTCAG	4 cut(s)	186, 426, 1287, 1645
BseNI	ACTGG	4 cut(s)	83, 101, 541, 1212
BseRI	GAGGAG	3 cut(s)	1254, 1280, 1389
BseSI	GKGCMC	2 cut(s)	355, 1446
BsgI	GTGCAG	2 cut(s)	600, 1509
Bsh1285I	CGRYCG	1 cut(s)	871
BshFI	GGCC	8 cut(s)	46, 75, 82, 324, 371, 557, 927, 1557
BshNI	GGYRCC	2 cut(s)	350, 1010
BshVI	ATCGAT	1 cut(s)	1253
BsiEI	CGRYCG	1 cut(s)	871
BsiHKAI	GWGCWC	2 cut(s)	169, 1446
BsiHKCI	CYCGRG	3 cut(s)	1122, 1243, 1465
BsiSI	CCGG	3 cut(s)	291, 764, 1466
BslFI	GGGAC	4 cut(s)	226, 349, 1140, 1557
BslI	CCNNNNNNNGG	5 cut(s)	100, 770, 953, 1545, 1715
BsmAI	GTCTC	4 cut(s)	1276, 1320, 1576, 1668
BsmFI	GGGAC	4 cut(s)	226, 349, 1140, 1557
BsmI	GAATGC	1 cut(s)	1456
BsnI	GGCC	8 cut(s)	46, 75, 82, 324, 371, 557, 927, 1557
Bso31I	GGTCTC	2 cut(s)	1320, 1576
BsoBI	CYCGRG	3 cut(s)	1122, 1243, 1465
Bsp1286I	GDGCHC	3 cut(s)	169, 355, 1446
Bsp13I	TCCGGA	1 cut(s)	763
Bsp143I	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
Bsp19I	CCATGG	2 cut(s)	828, 1518
BspACI	CCGC	4 cut(s)	402, 918, 1082, 1137
BspANI	GGCC	8 cut(s)	46, 75, 82, 324, 371, 557, 927, 1557
BspCNI	CTCAG	4 cut(s)	187, 425, 1286, 1644
BspDI	ATCGAT	1 cut(s)	1253
BspEI	TCCGGA	1 cut(s)	763
BspLI	GGNNCC	4 cut(s)	352, 541, 1012, 1128
BspMAI	CTGCAG	1 cut(s)	289
BspOI	GCTAGC	1 cut(s)	282
BspPI	GGATC	4 cut(s)	641, 669, 1402, 1700
BspT107I	GGYRCC	2 cut(s)	350, 1010
BspTNI	GGTCTC	2 cut(s)	1320, 1576
BsrDI	GCAATG	3 cut(s)	137, 142, 528
BsrFI	RCCGGY	1 cut(s)	290
BsrI	ACTGG	4 cut(s)	83, 101, 541, 1212
BssAI	RCCGGY	1 cut(s)	290
BssMI	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
BssT1I	CCWWGG	5 cut(s)	76, 325, 629, 828, 1518
Bst2UI	CCWGG	4 cut(s)	559, 710, 1102, 1176
Bst4CI	ACNGT	8 cut(s)	340, 571, 613, 643, 1067, 1648, 1660, 1765
BstC8I	GCNNGC	6 cut(s)	280, 652, 916, 1084, 1088, 1860
BstDEI	CTNAG	4 cut(s)	195, 412, 1273, 1631
BstDSI	CCRYGG	4 cut(s)	657, 828, 1518, 1761
BstF5I	GGATG	5 cut(s)	89, 514, 520, 1228, 1303
BstHHI	GCGC	2 cut(s)	607, 1174
BstKTI	GATC	7 cut(s)	636, 664, 1037, 1334, 1397, 1708, 1918
BstMAI	GTCTC	4 cut(s)	1276, 1320, 1576, 1668
BstMBI	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
BstMCI	CGRYCG	1 cut(s)	871
BstMWI	GCNNNNNNNGC	8 cut(s)	284, 359, 368, 408, 899, 924, 1106, 1145
BstNI	CCWGG	4 cut(s)	559, 710, 1102, 1176
BstNSI	RCATGY	3 cut(s)	1504, 1572, 1862
BstSCI	CCNGG	6 cut(s)	557, 708, 1100, 1174, 1464, 1465
BstSFI	CTRYAG	2 cut(s)	285, 792
BstSLI	GKGCMC	2 cut(s)	355, 1446
BstX2I	RGATCY	1 cut(s)	1394
BstXI	CCANNNNNNTGG	2 cut(s)	96, 1747
BstYI	RGATCY	1 cut(s)	1394
Bsu15I	ATCGAT	1 cut(s)	1253
BsuI	GTATCC	1 cut(s)	972
BsuRI	GGCC	8 cut(s)	46, 75, 82, 324, 371, 557, 927, 1557
BsuTUI	ATCGAT	1 cut(s)	1253
BtgI	CCRYGG	4 cut(s)	657, 828, 1518, 1761
BtsCI	GGATG	5 cut(s)	89, 514, 520, 1228, 1303
BtsI	GCAGTG	3 cut(s)	273, 282, 1305
BtsIMutI	CAGTG	6 cut(s)	94, 273, 282, 1205, 1305, 1918
Cac8I	GCNNGC	6 cut(s)	280, 652, 916, 1084, 1088, 1860
CaiI	CAGNNNCTG	2 cut(s)	419, 902
CfoI	GCGC	2 cut(s)	607, 1174
Cfr10I	RCCGGY	1 cut(s)	290
Cfr13I	GGNCC	5 cut(s)	80, 322, 596, 1127, 1364
Cfr9I	CCCGGG	1 cut(s)	1465
ClaI	ATCGAT	1 cut(s)	1253
Csp6I	GTAC	2 cut(s)	969, 1822
CviQI	GTAC	2 cut(s)	969, 1822
DdeI	CTNAG	4 cut(s)	195, 412, 1273, 1631
DpnI	GATC	7 cut(s)	635, 663, 1036, 1333, 1396, 1707, 1917
DpnII	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
EaeI	YGGCCR	3 cut(s)	44, 369, 555
Eco130I	CCWWGG	5 cut(s)	76, 325, 629, 828, 1518
Eco147I	AGGCCT	1 cut(s)	75
Eco31I	GGTCTC	2 cut(s)	1320, 1576
Eco32I	GATATC	1 cut(s)	1046
Eco47I	GGWCC	3 cut(s)	596, 1127, 1364
Eco57I	CTGAAG	1 cut(s)	879
Eco88I	CYCGRG	3 cut(s)	1122, 1243, 1465
EcoO109I	RGGNCCY	1 cut(s)	322
EcoRI	GAATTC	2 cut(s)	233, 1869
EcoRII	CCWGG	4 cut(s)	557, 708, 1100, 1174
EcoRV	GATATC	1 cut(s)	1046
EcoT14I	CCWWGG	5 cut(s)	76, 325, 629, 828, 1518
EcoT22I	ATGCAT	1 cut(s)	1506
ErhI	CCWWGG	5 cut(s)	76, 325, 629, 828, 1518
FaqI	GGGAC	4 cut(s)	226, 349, 1140, 1557
FauI	CCCGC	1 cut(s)	1075
FbaI	TGATCA	1 cut(s)	1915
FokI	GGATG	5 cut(s)	76, 521, 527, 1235, 1290
FspBI	CTAG	3 cut(s)	77, 279, 1340
GlaI	GCGC	2 cut(s)	606, 1173
GsuI	CTGGAG	2 cut(s)	792, 1302
HaeIII	GGCC	8 cut(s)	46, 75, 82, 324, 371, 557, 927, 1557
HapII	CCGG	3 cut(s)	291, 764, 1466
HhaI	GCGC	2 cut(s)	607, 1174
Hin6I	GCGC	2 cut(s)	605, 1172
HinP1I	GCGC	2 cut(s)	605, 1172
HincII	GTYRAC	2 cut(s)	997, 1410
HindII	GTYRAC	2 cut(s)	997, 1410
HindIII	AAGCTT	2 cut(s)	432, 751
HinfI	GANTC	7 cut(s)	50, 113, 767, 806, 943, 1211, 1676
HpaII	CCGG	3 cut(s)	291, 764, 1466
HphI	GGTGA	3 cut(s)	17, 131, 618
Hpy166II	GTNNAC	7 cut(s)	376, 726, 997, 1183, 1376, 1410, 1444
Hpy188I	TCNGA	7 cut(s)	164, 223, 508, 618, 1034, 1634, 1770
Hpy188III	TCNNGA	7 cut(s)	414, 478, 764, 771, 837, 1245, 1783
Hpy8I	GTNNAC	7 cut(s)	376, 726, 997, 1183, 1376, 1410, 1444
HpyAV	CCTTC	5 cut(s)	65, 94, 609, 1596, 1620
HpyCH4III	ACNGT	8 cut(s)	340, 571, 613, 643, 1067, 1648, 1660, 1765
HpyCH4IV	ACGT	2 cut(s)	169, 520
HpyF10VI	GCNNNNNNNGC	8 cut(s)	284, 359, 368, 408, 899, 924, 1106, 1145
HpyF3I	CTNAG	4 cut(s)	195, 412, 1273, 1631
HpySE526I	ACGT	2 cut(s)	169, 520
HspAI	GCGC	2 cut(s)	605, 1172
Kpn2I	TCCGGA	1 cut(s)	763
Ksp22I	TGATCA	1 cut(s)	1915
Kzo9I	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
LmnI	GCTCC	3 cut(s)	164, 416, 545
LweI	GCATC	3 cut(s)	241, 1213, 1312
MaeI	CTAG	3 cut(s)	77, 279, 1340
MaeII	ACGT	2 cut(s)	169, 520
MaeIII	GTNAC	7 cut(s)	301, 314, 471, 883, 1342, 1648, 1660
MalI	GATC	7 cut(s)	635, 663, 1036, 1333, 1396, 1707, 1917
MboI	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
MboII	GAAGA	1 cut(s)	80
MfeI	CAATTG	2 cut(s)	1077, 1701
MflI	RGATCY	1 cut(s)	1394
MhlI	GDGCHC	3 cut(s)	169, 355, 1446
MlsI	TGGCCA	2 cut(s)	46, 557
MluNI	TGGCCA	2 cut(s)	46, 557
MlyI	GAGTC	3 cut(s)	59, 776, 1670
MmeI	TCCRAC	1 cut(s)	971
Mox20I	TGGCCA	2 cut(s)	46, 557
Mph1103I	ATGCAT	1 cut(s)	1506
MroI	TCCGGA	1 cut(s)	763
MscI	TGGCCA	2 cut(s)	46, 557
MseI	TTAA	3 cut(s)	129, 819, 1602
MslI	CAYNNNNRTG	2 cut(s)	261, 1449
Msp20I	TGGCCA	2 cut(s)	46, 557
MspA1I	CMGCKG	2 cut(s)	584, 899
MspI	CCGG	3 cut(s)	291, 764, 1466
MspR9I	CCNGG	6 cut(s)	559, 710, 1102, 1176, 1466, 1467
MunI	CAATTG	2 cut(s)	1077, 1701
Mva1269I	GAATGC	1 cut(s)	1456
MvaI	CCWGG	4 cut(s)	559, 710, 1102, 1176
MwoI	GCNNNNNNNGC	8 cut(s)	284, 359, 368, 408, 899, 924, 1106, 1145
NciI	CCSGG	2 cut(s)	1466, 1467
NcoI	CCATGG	2 cut(s)	828, 1518
NdeII	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
NheI	GCTAGC	1 cut(s)	278
NlaIV	GGNNCC	4 cut(s)	352, 541, 1012, 1128
NmeAIII	GCCGAG	1 cut(s)	1414
NmuCI	GTSAC	4 cut(s)	301, 471, 1342, 1660
NsiI	ATGCAT	1 cut(s)	1506
NspI	RCATGY	3 cut(s)	1504, 1572, 1862
PaeI	GCATGC	1 cut(s)	1862
PceI	AGGCCT	1 cut(s)	75
PciI	ACATGT	1 cut(s)	1568
PcsI	WCGNNNNNNNCGW	1 cut(s)	1250
PctI	GAATGC	1 cut(s)	1456
PfeI	GAWTC	4 cut(s)	113, 806, 943, 1211
PflMI	CCANNNNNTGG	1 cut(s)	953
PleI	GAGTC	3 cut(s)	58, 775, 1670
PpsI	GAGTC	3 cut(s)	58, 775, 1670
PscI	ACATGT	1 cut(s)	1568
Psp6I	CCWGG	4 cut(s)	557, 708, 1100, 1174
PspGI	CCWGG	4 cut(s)	557, 708, 1100, 1174
PspN4I	GGNNCC	4 cut(s)	352, 541, 1012, 1128
PspPI	GGNCC	5 cut(s)	80, 322, 596, 1127, 1364
PsrI	GAACNNNNNNTAC	2 cut(s)	1805, 1837
PstI	CTGCAG	1 cut(s)	289
PstNI	CAGNNNCTG	2 cut(s)	419, 902
PsuI	RGATCY	1 cut(s)	1394
PvuII	CAGCTG	2 cut(s)	584, 899
RsaI	GTAC	2 cut(s)	970, 1823
RsaNI	GTAC	2 cut(s)	969, 1822
RseI	CAYNNNNRTG	2 cut(s)	261, 1449
SaqAI	TTAA	3 cut(s)	129, 819, 1602
Sau3AI	GATC	7 cut(s)	633, 661, 1034, 1331, 1394, 1705, 1915
Sau96I	GGNCC	5 cut(s)	80, 322, 596, 1127, 1364
SchI	GAGTC	3 cut(s)	59, 776, 1670
ScrFI	CCNGG	6 cut(s)	559, 710, 1102, 1176, 1466, 1467
SduI	GDGCHC	3 cut(s)	169, 355, 1446
SfaNI	GCATC	3 cut(s)	241, 1213, 1312
SfcI	CTRYAG	2 cut(s)	285, 792
SinI	GGWCC	3 cut(s)	596, 1127, 1364
SmaI	CCCGGG	1 cut(s)	1467
SmiMI	CAYNNNNRTG	2 cut(s)	261, 1449
SmlI	CTYRAG	2 cut(s)	734, 1154
SmoI	CTYRAG	2 cut(s)	734, 1154
SpeI	ACTAGT	1 cut(s)	1339
SphI	GCATGC	1 cut(s)	1862
SseBI	AGGCCT	1 cut(s)	75
SsiI	CCGC	4 cut(s)	402, 918, 1082, 1137
SspI	AATATT	1 cut(s)	1095
SspMI	CTAG	3 cut(s)	77, 279, 1340
StuI	AGGCCT	1 cut(s)	75
StyD4I	CCNGG	6 cut(s)	557, 708, 1100, 1174, 1464, 1465
StyI	CCWWGG	5 cut(s)	76, 325, 629, 828, 1518
TaaI	ACNGT	8 cut(s)	340, 571, 613, 643, 1067, 1648, 1660, 1765
TaiI	ACGT	2 cut(s)	172, 523
TaqI	TCGA	7 cut(s)	364, 479, 664, 1253, 1330, 1422, 1782
TaqII	GACCGA	1 cut(s)	857
TatI	WGTACW	1 cut(s)	968
TfiI	GAWTC	4 cut(s)	113, 806, 943, 1211
Tru1I	TTAA	3 cut(s)	129, 819, 1602
Tru9I	TTAA	3 cut(s)	129, 819, 1602
TscAI	CASTG	5 cut(s)	101, 280, 289, 1212, 1305
TseFI	GTSAC	4 cut(s)	301, 471, 1342, 1660
Tsp45I	GTSAC	4 cut(s)	301, 471, 1342, 1660
TspDTI	ATGAA	9 cut(s)	81, 226, 456, 531, 536, 1107, 1203, 1707, 1826
TspGWI	ACGGA	3 cut(s)	674, 1675, 1863
TspMI	CCCGGG	1 cut(s)	1465
TspRI	CASTG	5 cut(s)	101, 280, 289, 1212, 1305
Van91I	CCANNNNNTGG	1 cut(s)	953
VneI	GTGCAC	1 cut(s)	1442
VpaK11BI	GGWCC	3 cut(s)	596, 1127, 1364
XapI	RAATTY	3 cut(s)	125, 233, 1869
XceI	RCATGY	3 cut(s)	1504, 1572, 1862
XmaI	CCCGGG	1 cut(s)	1465
XmaJI	CCTAGG	1 cut(s)	76
XspI	CTAG	3 cut(s)	77, 279, 1340
Zsp2I	ATGCAT	1 cut(s)	1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.