Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001122

Physical Location & Seq

Genomic Coordinates Forward (+)

13297695 .. 13300444

Gene Structure 2750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G26260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 954 bp

ATGACGATCTCTGTTGAGAAGCCGATTTTTGAAGAGGTTTCTGCATTCGAGAAGAGTGGGGACAATATCGGAGAGTTGAAATTGGACGGAGGATTTTCGATGCCGAAAATGGACACCAATGACGACGAAGCTTTTTTGGCTCCTGAGATGAATGCATTTGGCCGCCAATTCAGGGACTACGATGTTGAGAGTGAGAGGCAAAAGGGCGTCGAAGAGTTTTACAGATTACAACACATCAACCAAACTGTCGACTTTGTGAAAAAGATGAGGGCTGAATATGGAAAATTAGATAAAATGGTGATGAGCATTTGGGAATGTTGTGAGCTTCTCAATGAGGTTGTGGATGAGAGTGATCCAGATCTTGACGAGCCCCAGATTCAGCATTTGCTTCAATCTGCCGAAGCCATCCGCAAAGATTACCCTAATGAAGATTGGCTTCATCTGACCGCTCTTATCCATGATCTTGGGAAAGTTATTACTCTTCCACAATTCGGAGGACTTCCTCAATGGGCTGTTGTTGGTGACACATTCCCTGTTGGATGTGCATTTGATGAATCTAACGTACATCACAAGTACTTTGTGGAAAACCCAGATTTTCACAACGAAACCTACAACACTAAAAATGGGATTTACTCTGAAGGGTGTGGATTAAACAATGTCATGATGTCTTGGGGCCATGACGACTACATGTACCTGGTGGCTAAAGAAAACGGAAGTACCTTGCCGTCGGCTGGACAGTTTATCATAAGATACCATTCCTTTTACCCTTTGCACACGGCTGGAGAATACACCCATCTTATGAACGAGGAAGACAAGGAGAATCTGAAGTGGCTACACGTTTTCAACAAGTACGACTTGTACAGTAAGAGCAAAGTTCACGTTGATGTGGAGAAGGTCAAGCCTTACTACATGTCTCTTATCAAGAAATATTTCCCGGAAAACTTGAGGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016701 GO:0019752 GO:0019852 GO:0019853 GO:0042364 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046364 GO:0046394 GO:0050113 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00053 ko00562 map00053 map00562

Pfam Domains

Protein Families

MIOX

Protein Analysis

317

Amino Acids

36.9

Weight (kDa)

4.89

Isoelectric Point (pI)

44.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIOX	PF05153	68 - 317	2e-126	Myo-inositol oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19800 AT4G26260 AT4G26260 AT5G56640 AT5G56640
fragaria_vesca	FvH4_1g06630 FvH4_1g06630 FvH4_5g01690 FvH4_5g20650
malus_domestica	MD02G1069300.v1.1 MD12G1147200.v1.1 MD15G1201000.v1.1
prunus_persica	Prupe.2G089300_v2.0.a1 Prupe.5G054000_v2.0.a1 Prupe.5G054100_v2.0.a1 Prupe.7G216300_v2.0.a1
pyrus_communis	pycom15g17840
rosa_chinensis	RchiOBHm_Chr2g0092361 RchiOBHm_Chr7g0199031 RchiOBHm_Chr7g0206031 RchiOBHm_Chr7g0206141 RchiOBHm_Chr7g0206211
rosa_laevigata	RLG00000003333 RLG00000003336 RLG00000003821 RLG00000003822 RLG00000016303
rosa_multiflora	Rmu_sc0000076.1_g000016 Rmu_sc0003289.1_g000008 Rmu_sc0004084.1_g000023 Rmu_sc0004084.1_g000036 Rmu_sc0007328.1_g000002 Rmu_sc0010737.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149200 Rroxscaffold_3G00251770 Rroxscaffold_3G00251780 Rroxscaffold_3G00251820 Rroxscaffold_3G00257200
rosa_rugosa	Rorug02G0025300.1 Rorug07G0052200 Rorug07G0094600 Rorug07G0094700 Rorug07G0094800
rosa_samantha	Rh2AG071300 Rh7AG175300 Rh7AG226800 Rh7BG178700 Rh7BG223000 Rh7CG184500 Rh7CG240800 Rh7DG178300 Rh7DG232900
rosa_wichuraiana	Rw0G012930 Rw2G006110 Rw7G015380 Rw7G019500 Rw7G019530 Rw7G019580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	449
AccI	GTMKAC	1 cut(s)	249
AciI	CCGC	3 cut(s)	163, 409, 447
AclWI	GGATC	1 cut(s)	347
AcoI	YGGCCR	1 cut(s)	160
AcuI	CTGAAG	2 cut(s)	657, 845
AcyI	GRCGYC	1 cut(s)	207
AfaI	GTAC	6 cut(s)	564, 575, 692, 718, 851, 860
AfiI	CCNNNNNNNGG	3 cut(s)	172, 491, 731
AflIII	ACRYGT	3 cut(s)	687, 835, 909
AgsI	TTSAA	4 cut(s)	32, 79, 392, 844
AjnI	CCWGG	1 cut(s)	693
AluBI	AGCT	2 cut(s)	131, 325
AluI	AGCT	2 cut(s)	131, 325
Alw26I	GTCTC	1 cut(s)	918
AlwI	GGATC	1 cut(s)	347
AoxI	GGCC	2 cut(s)	160, 673
Asp700I	GAANNNNTTC	1 cut(s)	929
AspS9I	GGNCC	1 cut(s)	673
AsuC2I	CCSGG	1 cut(s)	935
AsuHPI	GGTGA	2 cut(s)	310, 533
BaeI	ACNNNNGTAYC	2 cut(s)	700, 733
BanII	GRGCYC	1 cut(s)	372
BbsI	GAAGAC	1 cut(s)	816
BccI	CCATC	2 cut(s)	413, 801
BceAI	ACGGC	2 cut(s)	709, 792
BciT130I	CCWGG	1 cut(s)	695
BcnI	CCSGG	1 cut(s)	935
BcoDI	GTCTC	1 cut(s)	918
BglII	AGATCT	1 cut(s)	358
BisI	GCNGC	1 cut(s)	163
BlsI	GCNGC	1 cut(s)	164
BmcAI	AGTACT	1 cut(s)	575
Bme1390I	CCNGG	2 cut(s)	695, 935
BmgT120I	GGNCC	1 cut(s)	673
BmiI	GGNNCC	2 cut(s)	141, 674
BmrFI	CCNGG	2 cut(s)	695, 935
BmsI	GCATC	1 cut(s)	90
BpiI	GAAGAC	1 cut(s)	816
BpmI	CTGGAG	1 cut(s)	801
BpuMI	CCSGG	1 cut(s)	935
BsaBI	GATNNNNATC	1 cut(s)	357
BsaHI	GRCGYC	1 cut(s)	207
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 491, 731
Bse8I	GATNNNNATC	1 cut(s)	357
BseBI	CCWGG	1 cut(s)	695
BseGI	GGATG	3 cut(s)	349, 405, 545
BseJI	GATNNNNATC	1 cut(s)	357
BseLI	CCNNNNNNNGG	3 cut(s)	172, 491, 731
BseMII	CTCAG	1 cut(s)	135
BshFI	GGCC	2 cut(s)	162, 675
BsiSI	CCGG	1 cut(s)	935
BslFI	GGGAC	2 cut(s)	74, 188
BslI	CCNNNNNNNGG	3 cut(s)	172, 491, 731
BsmAI	GTCTC	1 cut(s)	918
BsmFI	GGGAC	2 cut(s)	74, 188
BsmI	GAATGC	2 cut(s)	44, 157
BsnI	GGCC	2 cut(s)	162, 675
Bsp1286I	GDGCHC	1 cut(s)	372
Bsp1407I	TGTACA	1 cut(s)	858
Bsp143I	GATC	4 cut(s)	6, 352, 358, 460
BspACI	CCGC	3 cut(s)	163, 409, 447
BspANI	GGCC	2 cut(s)	162, 675
BspCNI	CTCAG	1 cut(s)	136
BspHI	TCATGA	1 cut(s)	660
BspLI	GGNNCC	2 cut(s)	141, 674
BspPI	GGATC	1 cut(s)	347
BsrBI	CCGCTC	1 cut(s)	449
BsrGI	TGTACA	1 cut(s)	858
BssMI	GATC	4 cut(s)	6, 352, 358, 460
BssNI	GRCGYC	1 cut(s)	207
Bst2UI	CCWGG	1 cut(s)	695
Bst4CI	ACNGT	3 cut(s)	247, 738, 863
Bst6I	CTCTTC	4 cut(s)	27, 47, 207, 486
BstACI	GRCGYC	1 cut(s)	207
BstAUI	TGTACA	1 cut(s)	858
BstDEI	CTNAG	1 cut(s)	144
BstF5I	GGATG	3 cut(s)	349, 405, 545
BstKTI	GATC	4 cut(s)	9, 355, 361, 463
BstMAI	GTCTC	1 cut(s)	918
BstMBI	GATC	4 cut(s)	6, 352, 358, 460
BstMWI	GCNNNNNNNGC	1 cut(s)	137
BstNI	CCWGG	1 cut(s)	695
BstNSI	RCATGY	2 cut(s)	691, 913
BstSCI	CCNGG	2 cut(s)	693, 933
BstV2I	GAAGAC	1 cut(s)	816
BstX2I	RGATCY	1 cut(s)	358
BstXI	CCANNNNNNTGG	1 cut(s)	464
BstYI	RGATCY	1 cut(s)	358
BsuRI	GGCC	2 cut(s)	162, 675
BtsCI	GGATG	3 cut(s)	349, 405, 545
CciI	TCATGA	1 cut(s)	660
Cfr13I	GGNCC	1 cut(s)	673
CseI	GACGC	1 cut(s)	196
CsiI	ACCWGGT	1 cut(s)	693
Csp6I	GTAC	6 cut(s)	563, 574, 691, 717, 850, 859
CviAII	CATG	5 cut(s)	458, 661, 677, 688, 910
CviQI	GTAC	6 cut(s)	563, 574, 691, 717, 850, 859
DdeI	CTNAG	1 cut(s)	144
DpnI	GATC	4 cut(s)	8, 354, 360, 462
DpnII	GATC	4 cut(s)	6, 352, 358, 460
EaeI	YGGCCR	1 cut(s)	160
Eam1104I	CTCTTC	4 cut(s)	27, 47, 207, 486
EarI	CTCTTC	4 cut(s)	27, 47, 207, 486
Eco24I	GRGCYC	1 cut(s)	372
Eco57I	CTGAAG	2 cut(s)	657, 845
EcoRII	CCWGG	1 cut(s)	693
EcoT22I	ATGCAT	1 cut(s)	157
EcoT38I	GRGCYC	1 cut(s)	372
FaeI	CATG	5 cut(s)	461, 664, 680, 691, 913
FaiI	YATR	8 cut(s)	279, 459, 662, 678, 689, 746, 800, 911
FalI	AAGNNNNNCTT	4 cut(s)	420, 452, 839, 871
FaqI	GGGAC	2 cut(s)	74, 188
FatI	CATG	5 cut(s)	457, 660, 676, 687, 909
FblI	GTMKAC	1 cut(s)	249
Fnu4HI	GCNGC	1 cut(s)	163
FokI	GGATG	3 cut(s)	356, 392, 552
FriOI	GRGCYC	1 cut(s)	372
Fsp4HI	GCNGC	1 cut(s)	163
GluI	GCNGC	1 cut(s)	163
GsuI	CTGGAG	1 cut(s)	801
HaeIII	GGCC	2 cut(s)	162, 675
HapII	CCGG	1 cut(s)	935
HgaI	GACGC	1 cut(s)	196
Hin1I	GRCGYC	1 cut(s)	207
Hin1II	CATG	5 cut(s)	461, 664, 680, 691, 913
HincII	GTYRAC	1 cut(s)	250
HindII	GTYRAC	1 cut(s)	250
HindIII	AAGCTT	1 cut(s)	129
HinfI	GANTC	3 cut(s)	376, 554, 820
HpaII	CCGG	1 cut(s)	935
HphI	GGTGA	2 cut(s)	310, 533
Hpy166II	GTNNAC	2 cut(s)	250, 877
Hpy188I	TCNGA	5 cut(s)	71, 444, 494, 637, 825
Hpy188III	TCNNGA	6 cut(s)	49, 143, 356, 362, 661, 922
Hpy8I	GTNNAC	2 cut(s)	250, 877
Hpy99I	CGWCG	3 cut(s)	128, 212, 730
HpyAV	CCTTC	2 cut(s)	632, 886
HpyCH4III	ACNGT	3 cut(s)	247, 738, 863
HpyCH4IV	ACGT	3 cut(s)	561, 837, 879
HpyCH4V	TGCA	4 cut(s)	44, 155, 545, 772
HpyF10VI	GCNNNNNNNGC	1 cut(s)	137
HpyF3I	CTNAG	1 cut(s)	144
HpySE526I	ACGT	3 cut(s)	561, 837, 879
Hsp92I	GRCGYC	1 cut(s)	207
Hsp92II	CATG	5 cut(s)	461, 664, 680, 691, 913
Kzo9I	GATC	4 cut(s)	6, 352, 358, 460
LmnI	GCTCC	1 cut(s)	145
LweI	GCATC	1 cut(s)	90
MabI	ACCWGGT	1 cut(s)	693
MaeII	ACGT	3 cut(s)	561, 837, 879
MaeIII	GTNAC	1 cut(s)	521
MalI	GATC	4 cut(s)	8, 354, 360, 462
MbiI	CCGCTC	1 cut(s)	449
MboI	GATC	4 cut(s)	6, 352, 358, 460
MboII	GAAGA	6 cut(s)	44, 64, 224, 440, 473, 821
MflI	RGATCY	1 cut(s)	358
MhlI	GDGCHC	1 cut(s)	372
MluCI	AATT	4 cut(s)	80, 167, 284, 488
MmeI	TCCRAC	1 cut(s)	517
MnlI	CCTC	9 cut(s)	28, 83, 189, 261, 328, 488, 513, 799, 939
Mph1103I	ATGCAT	1 cut(s)	157
MroXI	GAANNNNTTC	1 cut(s)	929
MseI	TTAA	1 cut(s)	650
MslI	CAYNNNNRTG	1 cut(s)	882
MspI	CCGG	1 cut(s)	935
MspR9I	CCNGG	2 cut(s)	695, 935
Mva1269I	GAATGC	2 cut(s)	44, 157
MvaI	CCWGG	1 cut(s)	695
MwoI	GCNNNNNNNGC	1 cut(s)	137
NciI	CCSGG	1 cut(s)	935
NdeII	GATC	4 cut(s)	6, 352, 358, 460
NlaIII	CATG	5 cut(s)	461, 664, 680, 691, 913
NlaIV	GGNNCC	2 cut(s)	141, 674
NmuCI	GTSAC	1 cut(s)	521
NsiI	ATGCAT	1 cut(s)	157
NspI	RCATGY	2 cut(s)	691, 913
PagI	TCATGA	1 cut(s)	660
PciI	ACATGT	2 cut(s)	687, 909
PctI	GAATGC	2 cut(s)	44, 157
PdmI	GAANNNNTTC	1 cut(s)	929
PfeI	GAWTC	3 cut(s)	376, 554, 820
PfoI	TCCNGGA	1 cut(s)	933
PkrI	GCNGC	1 cut(s)	164
PscI	ACATGT	2 cut(s)	687, 909
Psp6I	CCWGG	1 cut(s)	693
PspGI	CCWGG	1 cut(s)	693
PspN4I	GGNNCC	2 cut(s)	141, 674
PspPI	GGNCC	1 cut(s)	673
PsuI	RGATCY	1 cut(s)	358
RsaI	GTAC	6 cut(s)	564, 575, 692, 718, 851, 860
RsaNI	GTAC	6 cut(s)	563, 574, 691, 717, 850, 859
RseI	CAYNNNNRTG	1 cut(s)	882
SalI	GTCGAC	1 cut(s)	248
SaqAI	TTAA	1 cut(s)	650
SatI	GCNGC	1 cut(s)	163
Sau3AI	GATC	4 cut(s)	6, 352, 358, 460
Sau96I	GGNCC	1 cut(s)	673
ScaI	AGTACT	1 cut(s)	575
ScrFI	CCNGG	2 cut(s)	695, 935
SduI	GDGCHC	1 cut(s)	372
SexAI	ACCWGGT	1 cut(s)	693
SfaNI	GCATC	1 cut(s)	90
SmiMI	CAYNNNNRTG	1 cut(s)	882
SmlI	CTYRAG	1 cut(s)	943
SmoI	CTYRAG	1 cut(s)	943
Sse9I	AATT	4 cut(s)	80, 167, 284, 488
SsiI	CCGC	3 cut(s)	163, 409, 447
SspI	AATATT	1 cut(s)	929
StyD4I	CCNGG	2 cut(s)	693, 933
TaaI	ACNGT	3 cut(s)	247, 738, 863
TaiI	ACGT	3 cut(s)	564, 840, 882
TaqI	TCGA	4 cut(s)	48, 98, 210, 249
TasI	AATT	4 cut(s)	80, 167, 284, 488
TatI	WGTACW	2 cut(s)	573, 858
TauI	GCSGC	1 cut(s)	165
TfiI	GAWTC	3 cut(s)	376, 554, 820
Tru1I	TTAA	1 cut(s)	650
Tru9I	TTAA	1 cut(s)	650
TseFI	GTSAC	1 cut(s)	521
Tsp45I	GTSAC	1 cut(s)	521
TspDTI	ATGAA	5 cut(s)	164, 428, 441, 567, 815
TspGWI	ACGGA	2 cut(s)	102, 726
XceI	RCATGY	2 cut(s)	691, 913
XmiI	GTMKAC	1 cut(s)	249
XmnI	GAANNNNTTC	1 cut(s)	929
ZrmI	AGTACT	1 cut(s)	575
Zsp2I	ATGCAT	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.