Rorug07G0094700

Inositol oxygenase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
7429095 .. 7431332
2238 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0094700.1

Sequence Viewer

Length: 1101 bp
ATGGCAGATAGTTTCACCAGTTCTCGCCAATCTCTCGTTCCGAGCTTCCTCTACTCTTCTTCAATTTCTTCGAAAAGATCGATTGATTTGGATGCCGTGACACATAGAAGTGGTACCCGTGCATCGTCACCGTTTATTTCATCATCTACGTCGTCGAAGAGGGTGGTGATTCCGTCGCCTAATGAGAAAATTGAGATGTACTCGCCGGCATTCTATGCCGCGTGTACAGTCGCAGGAATGTTGGCCACCGGACCCACCCACACGGCTGTCACTCCTATTGATCTGGTCAAGTGTAACATGCAGATTAACCCGGCAAAATACAAAAGCGTCATCTCTGGATTTGGAGTTATGTTCAGGGAGCAAGGAATTAGAGGTTTCTTTAGGGGTTGGGCGCCCACTTTGATTGGTTACAGTGCTCAGGGTGCCGGCAAGTACGGCCTCTACGAGTTCTTTAAGAAGTACTATGCAGATATTGCAGGGCCTGAGTATGCAGCCAAGTACAAAACCTTGATCTATCTCGCAGGTTCTGCATCTGCTGAAGTGTTTGCTGATGTTGCCCTCTGTCCTATGGAAGCTGTCAAAGTTCGAGTCCAGACTCAGCCGGGGTTCGCCAGAGGTTTGTCAGATGGGCTACCAAAGTTTATCAAATCCGAAGGCGCTCTCGGGTTGTACAAAGGGATTGTTCCTCTTTGGGGACGCCAAATTCCTTATACAATGATGAAATTTGCAACTTTTGAGAAATTTGTCGAGCTCACTTACAAGCATGTGATCCCAACACCGAAAGAGCAGTGCAGCACACCCTTGCAGCTCGGAGTGAGCTTTGCGTGTGGATATGTGGCTGGTGTGTTCTGTGCTGTTATTTCACACCCTGCTGATAACTTGGTGTCTTTCCTCAACAATGCCAAGGGGGCAACTGTTAGTGATGCTGTGAAGAATCTAGGAGTGTGGGGTCTGTTCACCCGGGGTCTTCCTCTTCGTATAGTCATGATCGGAACCCTTACTGGAAGCCAATGGGGTATCTATGATGCCTGCAAAGTTTTCATGGGCGTGCCGACTACTGGCGGCGCCGCTCCTGCTGCCACTGAGCTTGCCAATTCTTGA

Protein Analysis

366

Amino Acids

39.26

Weight (kDa)

9.35

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 72 - 156 3.2e-21 Mitochondrial carrier protein
Mito_carr PF00153 168 - 254 4.5e-18 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 512
Acc65I GGTACC 1 cut(s) 113
AccB1I GGYRCC 4 cut(s) 113, 391, 422, 1064
AccBSI CCGCTC 1 cut(s) 1070
AccII CGCG 1 cut(s) 221
AciI CCGC 3 cut(s) 219, 1062, 1068
AclWI GGATC 1 cut(s) 763
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 3 cut(s) 702, 722, 740
AcuI CTGAAG 1 cut(s) 558
AcyI GRCGYC 3 cut(s) 392, 697, 1065
AfaI GTAC 7 cut(s) 115, 200, 226, 434, 461, 500, 671
AfiI CCNNNNNNNGG 2 cut(s) 692, 1058
AgsI TTSAA 1 cut(s) 63
AjuI GAANNNNNNNTTGG 2 cut(s) 21, 53
AluBI AGCT 6 cut(s) 45, 575, 751, 808, 819, 1087
AluI AGCT 6 cut(s) 45, 575, 751, 808, 819, 1087
Alw21I GWGCWC 2 cut(s) 418, 753
AlwI GGATC 1 cut(s) 763
AlwNI CAGNNNCTG 2 cut(s) 482, 527
Ama87I CYCGRG 2 cut(s) 662, 960
AoxI GGCC 3 cut(s) 243, 436, 479
ApeKI GCWGC 4 cut(s) 491, 792, 805, 1076
ApoI RAATTY 3 cut(s) 702, 722, 740
ArsI GACNNNNNNTTYG 2 cut(s) 573, 605
Asp718I GGTACC 1 cut(s) 113
AspLEI GCGC 3 cut(s) 394, 659, 1067
AspS9I GGNCC 2 cut(s) 251, 479
AsuC2I CCSGG 4 cut(s) 311, 603, 961, 962
AsuHPI GGTGA 4 cut(s) 7, 120, 178, 949
AsuII TTCGAA 1 cut(s) 71
AvaI CYCGRG 2 cut(s) 662, 960
AvaII GGWCC 1 cut(s) 251
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 4 cut(s) 113, 391, 422, 1064
BanII GRGCYC 1 cut(s) 753
BbsI GAAGAC 1 cut(s) 959
Bbv12I GWGCWC 2 cut(s) 418, 753
BbvI GCAGC 4 cut(s) 503, 804, 817, 1063
BccI CCATC 1 cut(s) 620
BceAI ACGGC 3 cut(s) 80, 279, 451
BcnI CCSGG 4 cut(s) 311, 603, 961, 962
BfaI CTAG 1 cut(s) 938
BfoI RGCGCY 3 cut(s) 395, 660, 1068
BfuAI ACCTGC 1 cut(s) 512
BglI GCCNNNNNGGC 1 cut(s) 908
BisI GCNGC 7 cut(s) 219, 492, 793, 806, 1063, 1068, 1077
BlsI GCNGC 7 cut(s) 220, 493, 794, 807, 1064, 1069, 1078
BmcAI AGTACT 1 cut(s) 461
Bme1390I CCNGG 4 cut(s) 311, 603, 961, 962
Bme18I GGWCC 1 cut(s) 251
BmeT110I CYCGRG 2 cut(s) 662, 960
BmgT120I GGNCC 2 cut(s) 251, 479
BmiI GGNNCC 6 cut(s) 115, 253, 393, 424, 994, 1066
BmrFI CCNGG 4 cut(s) 311, 603, 961, 962
BmsI GCATC 5 cut(s) 82, 131, 539, 913, 1015
BpiI GAAGAC 1 cut(s) 959
BplI GAGNNNNNCTC 2 cut(s) 185, 217
Bpu10I CCTNAGC 1 cut(s) 417
Bpu14I TTCGAA 1 cut(s) 71
BpuMI CCSGG 4 cut(s) 311, 603, 961, 962
Bsa29I ATCGAT 1 cut(s) 80
BsaHI GRCGYC 3 cut(s) 392, 697, 1065
BsaJI CCNNGG 4 cut(s) 602, 903, 960, 961
BsaWI WCCGGW 1 cut(s) 248
Bsc4I CCNNNNNNNGG 2 cut(s) 692, 1058
Bse118I RCCGGY 2 cut(s) 205, 425
Bse1I ACTGG 3 cut(s) 18, 1006, 1063
BseCI ATCGAT 1 cut(s) 80
BseDI CCNNGG 4 cut(s) 602, 903, 960, 961
BseGI GGATG 1 cut(s) 97
BseLI CCNNNNNNNGG 2 cut(s) 692, 1058
BseMII CTCAG 4 cut(s) 431, 474, 611, 1074
BseNI ACTGG 3 cut(s) 18, 1006, 1063
BseXI GCAGC 4 cut(s) 503, 804, 817, 1063
BsgI GTGCAG 1 cut(s) 811
Bsh1236I CGCG 1 cut(s) 221
BshFI GGCC 3 cut(s) 245, 438, 481
BshNI GGYRCC 4 cut(s) 113, 391, 422, 1064
BshVI ATCGAT 1 cut(s) 80
BsiHKAI GWGCWC 2 cut(s) 418, 753
BsiHKCI CYCGRG 2 cut(s) 662, 960
BsiSI CCGG 6 cut(s) 206, 249, 311, 426, 602, 961
BslFI GGGAC 1 cut(s) 708
BslI CCNNNNNNNGG 2 cut(s) 692, 1058
BsmFI GGGAC 1 cut(s) 708
BsmI GAATGC 1 cut(s) 209
BsnI GGCC 3 cut(s) 245, 438, 481
BsoBI CYCGRG 2 cut(s) 662, 960
Bsp119I TTCGAA 1 cut(s) 71
Bsp1286I GDGCHC 2 cut(s) 418, 753
Bsp1407I TGTACA 2 cut(s) 224, 669
Bsp143I GATC 5 cut(s) 77, 280, 510, 768, 987
BspACI CCGC 3 cut(s) 219, 1062, 1068
BspANI GGCC 3 cut(s) 245, 438, 481
BspCNI CTCAG 4 cut(s) 430, 475, 610, 1075
BspDI ATCGAT 1 cut(s) 80
BspFNI CGCG 1 cut(s) 221
BspHI TCATGA 1 cut(s) 984
BspLI GGNNCC 6 cut(s) 115, 253, 393, 424, 994, 1066
BspMI ACCTGC 1 cut(s) 512
BspPI GGATC 1 cut(s) 763
BspT104I TTCGAA 1 cut(s) 71
BspT107I GGYRCC 4 cut(s) 113, 391, 422, 1064
BsrBI CCGCTC 1 cut(s) 1070
BsrFI RCCGGY 2 cut(s) 205, 425
BsrGI TGTACA 2 cut(s) 224, 669
BsrI ACTGG 3 cut(s) 18, 1006, 1063
BssAI RCCGGY 2 cut(s) 205, 425
BssECI CCNNGG 4 cut(s) 602, 903, 960, 961
BssMI GATC 5 cut(s) 77, 280, 510, 768, 987
BssNI GRCGYC 3 cut(s) 392, 697, 1065
BssT1I CCWWGG 1 cut(s) 903
Bst4CI ACNGT 4 cut(s) 132, 229, 413, 916
Bst6I CTCTTC 3 cut(s) 61, 152, 978
BstACI GRCGYC 3 cut(s) 392, 697, 1065
BstAPI GCANNNNNTGC 3 cut(s) 215, 473, 527
BstAUI TGTACA 2 cut(s) 224, 669
BstBI TTCGAA 1 cut(s) 71
BstC8I GCNNGC 5 cut(s) 207, 427, 1030, 1049, 1089
BstDEI CTNAG 4 cut(s) 417, 483, 597, 1083
BstF5I GGATG 1 cut(s) 97
BstFNI CGCG 1 cut(s) 221
BstH2I RGCGCY 3 cut(s) 395, 660, 1068
BstHHI GCGC 3 cut(s) 394, 659, 1067
BstKTI GATC 5 cut(s) 80, 283, 513, 771, 990
BstMBI GATC 5 cut(s) 77, 280, 510, 768, 987
BstMWI GCNNNNNNNGC 9 cut(s) 215, 422, 435, 473, 527, 554, 908, 1073, 1076
BstNSI RCATGY 2 cut(s) 301, 767
BstSCI CCNGG 4 cut(s) 309, 601, 959, 960
BstUI CGCG 1 cut(s) 221
BstV1I GCAGC 4 cut(s) 503, 804, 817, 1063
BstV2I GAAGAC 1 cut(s) 959
Bsu15I ATCGAT 1 cut(s) 80
BsuRI GGCC 3 cut(s) 245, 438, 481
BsuTUI ATCGAT 1 cut(s) 80
BtsCI GGATG 1 cut(s) 97
BtsI GCAGTG 1 cut(s) 794
BtsIMutI CAGTG 3 cut(s) 418, 794, 1080
BveI ACCTGC 1 cut(s) 512
Cac8I GCNNGC 5 cut(s) 207, 427, 1030, 1049, 1089
CaiI CAGNNNCTG 2 cut(s) 482, 527
CciI TCATGA 1 cut(s) 984
CfoI GCGC 3 cut(s) 394, 659, 1067
Cfr10I RCCGGY 2 cut(s) 205, 425
Cfr13I GGNCC 2 cut(s) 251, 479
Cfr9I CCCGGG 1 cut(s) 960
ClaI ATCGAT 1 cut(s) 80
CseI GACGC 2 cut(s) 316, 705
Csp6I GTAC 7 cut(s) 114, 199, 225, 433, 460, 499, 670
CspCI CAANNNNNGTGG 3 cut(s) 385, 420, 1069
CviAII CATG 4 cut(s) 298, 764, 985, 1042
CviQI GTAC 7 cut(s) 114, 199, 225, 433, 460, 499, 670
DdeI CTNAG 4 cut(s) 417, 483, 597, 1083
DinI GGCGCC 2 cut(s) 393, 1066
DpnI GATC 5 cut(s) 79, 282, 512, 770, 989
DpnII GATC 5 cut(s) 77, 280, 510, 768, 987
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 3 cut(s) 61, 152, 978
EarI CTCTTC 3 cut(s) 61, 152, 978
Ecl136II GAGCTC 1 cut(s) 751
Eco130I CCWWGG 1 cut(s) 903
Eco24I GRGCYC 1 cut(s) 753
Eco47I GGWCC 1 cut(s) 251
Eco53kI GAGCTC 1 cut(s) 751
Eco57I CTGAAG 1 cut(s) 558
Eco88I CYCGRG 2 cut(s) 662, 960
EcoICRI GAGCTC 1 cut(s) 751
EcoO109I RGGNCCY 1 cut(s) 479
EcoT14I CCWWGG 1 cut(s) 903
EcoT38I GRGCYC 1 cut(s) 753
EgeI GGCGCC 2 cut(s) 393, 1066
EheI GGCGCC 2 cut(s) 393, 1066
ErhI CCWWGG 1 cut(s) 903
FaeI CATG 4 cut(s) 301, 767, 988, 1045
FaqI GGGAC 1 cut(s) 708
FatI CATG 4 cut(s) 297, 763, 984, 1041
Fnu4HI GCNGC 7 cut(s) 219, 492, 793, 806, 1063, 1068, 1077
FokI GGATG 1 cut(s) 104
FriOI GRGCYC 1 cut(s) 753
Fsp4HI GCNGC 7 cut(s) 219, 492, 793, 806, 1063, 1068, 1077
FspBI CTAG 1 cut(s) 938
GlaI GCGC 3 cut(s) 393, 658, 1066
GluI GCNGC 7 cut(s) 219, 492, 793, 806, 1063, 1068, 1077
HaeII RGCGCY 3 cut(s) 395, 660, 1068
HaeIII GGCC 3 cut(s) 245, 438, 481
HapII CCGG 6 cut(s) 206, 249, 311, 426, 602, 961
HgaI GACGC 2 cut(s) 316, 705
HhaI GCGC 3 cut(s) 394, 659, 1067
Hin1I GRCGYC 3 cut(s) 392, 697, 1065
Hin1II CATG 4 cut(s) 301, 767, 988, 1045
Hin6I GCGC 3 cut(s) 392, 657, 1065
HinP1I GCGC 3 cut(s) 392, 657, 1065
HinfI GANTC 4 cut(s) 169, 588, 595, 934
HpaII CCGG 6 cut(s) 206, 249, 311, 426, 602, 961
HphI GGTGA 4 cut(s) 7, 120, 178, 949
Hpy166II GTNNAC 2 cut(s) 225, 957
Hpy188I TCNGA 5 cut(s) 42, 625, 652, 812, 992
Hpy188III TCNNGA 4 cut(s) 336, 592, 985, 1098
Hpy8I GTNNAC 2 cut(s) 225, 957
Hpy99I CGWCG 3 cut(s) 154, 157, 178
HpyAV CCTTC 1 cut(s) 647
HpyCH4III ACNGT 4 cut(s) 132, 229, 413, 916
HpyCH4IV ACGT 1 cut(s) 149
HpyF10VI GCNNNNNNNGC 9 cut(s) 215, 422, 435, 473, 527, 554, 908, 1073, 1076
HpyF3I CTNAG 4 cut(s) 417, 483, 597, 1083
HpySE526I ACGT 1 cut(s) 149
Hsp92I GRCGYC 3 cut(s) 392, 697, 1065
Hsp92II CATG 4 cut(s) 301, 767, 988, 1045
HspAI GCGC 3 cut(s) 392, 657, 1065
KasI GGCGCC 2 cut(s) 391, 1064
KpnI GGTACC 1 cut(s) 117
KroI GCCGGC 2 cut(s) 205, 425
KroNI GCCGGC 2 cut(s) 207, 427
Kzo9I GATC 5 cut(s) 77, 280, 510, 768, 987
LmnI GCTCC 2 cut(s) 358, 1075
Lsp1109I GCAGC 4 cut(s) 503, 804, 817, 1063
LweI GCATC 5 cut(s) 82, 131, 539, 913, 1015
MaeI CTAG 1 cut(s) 938
MaeII ACGT 1 cut(s) 149
MaeIII GTNAC 5 cut(s) 97, 126, 268, 293, 407
MalI GATC 5 cut(s) 79, 282, 512, 770, 989
MbiI CCGCTC 1 cut(s) 1070
MboI GATC 5 cut(s) 77, 280, 510, 768, 987
MboII GAAGA 7 cut(s) 48, 51, 60, 169, 943, 959, 965
MhlI GDGCHC 2 cut(s) 418, 753
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 7 cut(s) 63, 189, 366, 702, 722, 740, 1093
MluNI TGGCCA 1 cut(s) 245
Mly113I GGCGCC 2 cut(s) 392, 1065
MlyI GAGTC 2 cut(s) 589, 597
MnlI CCTC 9 cut(s) 59, 153, 365, 449, 569, 608, 696, 902, 981
Mox20I TGGCCA 1 cut(s) 245
MroNI GCCGGC 2 cut(s) 205, 425
MscI TGGCCA 1 cut(s) 245
MseI TTAA 2 cut(s) 306, 453
MslI CAYNNNNRTG 2 cut(s) 108, 1046
Msp20I TGGCCA 1 cut(s) 245
MspI CCGG 6 cut(s) 206, 249, 311, 426, 602, 961
MspR9I CCNGG 4 cut(s) 311, 603, 961, 962
Mva1269I GAATGC 1 cut(s) 209
MvnI CGCG 1 cut(s) 221
MwoI GCNNNNNNNGC 9 cut(s) 215, 422, 435, 473, 527, 554, 908, 1073, 1076
NaeI GCCGGC 2 cut(s) 207, 427
NarI GGCGCC 2 cut(s) 392, 1065
NciI CCSGG 4 cut(s) 311, 603, 961, 962
NdeII GATC 5 cut(s) 77, 280, 510, 768, 987
NgoMIV GCCGGC 2 cut(s) 205, 425
NlaIII CATG 4 cut(s) 301, 767, 988, 1045
NlaIV GGNNCC 6 cut(s) 115, 253, 393, 424, 994, 1066
NmuCI GTSAC 3 cut(s) 97, 126, 268
NspI RCATGY 2 cut(s) 301, 767
NspV TTCGAA 1 cut(s) 71
PagI TCATGA 1 cut(s) 984
PcsI WCGNNNNNNNCGW 2 cut(s) 77, 441
PctI GAATGC 1 cut(s) 209
PdiI GCCGGC 2 cut(s) 207, 427
PfeI GAWTC 2 cut(s) 169, 934
PkrI GCNGC 7 cut(s) 220, 493, 794, 807, 1064, 1069, 1078
PleI GAGTC 2 cut(s) 589, 596
PluTI GGCGCC 2 cut(s) 395, 1068
PpsI GAGTC 2 cut(s) 589, 596
Psp124BI GAGCTC 1 cut(s) 753
PspN4I GGNNCC 6 cut(s) 115, 253, 393, 424, 994, 1066
PspPI GGNCC 2 cut(s) 251, 479
PstNI CAGNNNCTG 2 cut(s) 482, 527
RsaI GTAC 7 cut(s) 115, 200, 226, 434, 461, 500, 671
RsaNI GTAC 7 cut(s) 114, 199, 225, 433, 460, 499, 670
RseI CAYNNNNRTG 2 cut(s) 108, 1046
SacI GAGCTC 1 cut(s) 753
SaqAI TTAA 2 cut(s) 306, 453
SatI GCNGC 7 cut(s) 219, 492, 793, 806, 1063, 1068, 1077
Sau3AI GATC 5 cut(s) 77, 280, 510, 768, 987
Sau96I GGNCC 2 cut(s) 251, 479
ScaI AGTACT 1 cut(s) 461
SchI GAGTC 2 cut(s) 589, 597
ScrFI CCNGG 4 cut(s) 311, 603, 961, 962
SduI GDGCHC 2 cut(s) 418, 753
SfaNI GCATC 5 cut(s) 82, 131, 539, 913, 1015
SfoI GGCGCC 2 cut(s) 393, 1066
SfuI TTCGAA 1 cut(s) 71
SinI GGWCC 1 cut(s) 251
SmaI CCCGGG 1 cut(s) 962
SmiMI CAYNNNNRTG 2 cut(s) 108, 1046
Sse9I AATT 7 cut(s) 63, 189, 366, 702, 722, 740, 1093
SsiI CCGC 3 cut(s) 219, 1062, 1068
SspDI GGCGCC 2 cut(s) 391, 1064
SspMI CTAG 1 cut(s) 938
SstI GAGCTC 1 cut(s) 753
StyD4I CCNGG 4 cut(s) 309, 601, 959, 960
StyI CCWWGG 1 cut(s) 903
TaaI ACNGT 4 cut(s) 132, 229, 413, 916
TaiI ACGT 1 cut(s) 152
TaqI TCGA 5 cut(s) 71, 80, 155, 586, 747
TasI AATT 7 cut(s) 63, 189, 366, 702, 722, 740, 1093
TatI WGTACW 5 cut(s) 198, 224, 459, 498, 669
TauI GCSGC 3 cut(s) 221, 1065, 1070
TfiI GAWTC 2 cut(s) 169, 934
Tru1I TTAA 2 cut(s) 306, 453
Tru9I TTAA 2 cut(s) 306, 453
TscAI CASTG 3 cut(s) 418, 794, 1087
TseFI GTSAC 3 cut(s) 97, 126, 268
TseI GCWGC 4 cut(s) 491, 792, 805, 1076
Tsp45I GTSAC 3 cut(s) 97, 126, 268
TspDTI ATGAA 3 cut(s) 129, 734, 1030
TspGWI ACGGA 1 cut(s) 162
TspMI CCCGGG 1 cut(s) 960
TspRI CASTG 3 cut(s) 418, 794, 1087
VpaK11BI GGWCC 1 cut(s) 251
XapI RAATTY 3 cut(s) 702, 722, 740
XceI RCATGY 2 cut(s) 301, 767
XmaI CCCGGG 1 cut(s) 960
XspI CTAG 1 cut(s) 938
ZrmI AGTACT 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.