Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001122

Physical Location & Seq

Genomic Coordinates Forward (+)

19553809 .. 19556347

Gene Structure 2539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G216300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGACTATCCTCATTGAGCAGCCTGATCATCAGCTTGGGTCACAAATGGAGGAGAAGAAGCTTTGTTCTGAAACCAATGAAACCTGTGAACTGGTTTTGGATGGTGGGTTTGTGGTGCCCAAAGACATCTCCAAAAATGACGGATGTGTGACACAAGAAATTGCAGCATCAAATGATGCCTTCATTGCCCCTGAAATTAACTCATTTGGCCAGTCATTCAGGGATTACAATGCAGAAAGTGAGAGGCAGAAATCTGTGGAGGAATTCTACAAGTCGAACCACATCAATCAAACATTCGATTTCGTGAAGAAGATGAGGGAGGAGTATAGCAAGTTGAACAGAGTGGAAATGAGCATATGGGAATGTTGTGAGCTCCTCAATGAGGTTGTGGATGACAGTGACCCTGACTTGGATGAACCCCAAATTGAGCATTTGTTGCAAACAGCTGAAGCCATCAGAAAAGACTATCCTAATGAAGATTGGTTGCACTTGACTGCCCTTATTCATGATCTTGGAAAAGTGCTTCTTCTTCCTAGCTTTGGAGAACTTCCTCAATGGGCTGTTGTTGGAGACACACATCCTCTTGGGTGCGCTTTTGATGAATCCATTGTTCACCACAAGTATTTCAAGGAAAATCCGGACTACAACAATGCTTCCTTTAACACTAAGTATGGGATCTACTCAGAAGGATGCGGACTGGACAATGTCATGATATCTTGGGGTCATGATGACTACATGTACTTGGTGGCTAAGGAAAATGGAACAACTTTGCCTCAGGCTGGATTGTTCATCGTCCGGTATCACTCGTTTTATCCTTTACATAGGGCAGGGGCTTATAGACACCTTATGAACAAGGAGGATGAAGAGAATCTAAAGTGGCTTCAAGTGTTCAACAAATATGACCTGTACAGCAAGAGCAAAGTACGAGTAGATGTCGAAAAAGTGAAGCCATATTATTTATCCCTCATTGAGAAGTATTTCCCAGCAAAGCTGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016701 GO:0019752 GO:0019852 GO:0019853 GO:0042364 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046364 GO:0046394 GO:0050113 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00053 ko00562 map00053 map00562

Pfam Domains

Protein Families

MIOX

Protein Analysis

334

Amino Acids

38.67

Weight (kDa)

4.92

Isoelectric Point (pI)

44.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19800 AT4G26260 AT4G26260 AT5G56640 AT5G56640
fragaria_vesca	FvH4_1g06630 FvH4_1g06630 FvH4_5g01690 FvH4_5g20650
malus_domestica	MD02G1069300.v1.1 MD12G1147200.v1.1 MD15G1201000.v1.1
prunus_persica	Prupe.2G089300_v2.0.a1 Prupe.5G054000_v2.0.a1 Prupe.5G054100_v2.0.a1 Prupe.7G216300_v2.0.a1
pyrus_communis	pycom15g17840
rosa_chinensis	RchiOBHm_Chr2g0092361 RchiOBHm_Chr7g0199031 RchiOBHm_Chr7g0206031 RchiOBHm_Chr7g0206141 RchiOBHm_Chr7g0206211
rosa_laevigata	RLG00000003333 RLG00000003336 RLG00000003821 RLG00000003822 RLG00000016303
rosa_multiflora	Rmu_sc0000076.1_g000016 Rmu_sc0003289.1_g000008 Rmu_sc0004084.1_g000023 Rmu_sc0004084.1_g000036 Rmu_sc0007328.1_g000002 Rmu_sc0010737.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149200 Rroxscaffold_3G00251770 Rroxscaffold_3G00251780 Rroxscaffold_3G00251820 Rroxscaffold_3G00257200
rosa_rugosa	Rorug02G0025300.1 Rorug07G0052200 Rorug07G0094600 Rorug07G0094700 Rorug07G0094800
rosa_samantha	Rh2AG071300 Rh7AG175300 Rh7AG226800 Rh7BG178700 Rh7BG223000 Rh7CG184500 Rh7CG240800 Rh7DG178300 Rh7DG232900
rosa_wichuraiana	Rw0G012930 Rw2G006110 Rw7G015380 Rw7G019500 Rw7G019530 Rw7G019580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	115
AccIII	TCCGGA	1 cut(s)	637
AciI	CCGC	1 cut(s)	693
AclWI	GGATC	1 cut(s)	683
AcoI	YGGCCR	1 cut(s)	208
AcsI	RAATTY	1 cut(s)	263
AcuI	CTGAAG	1 cut(s)	468
AfaI	GTAC	3 cut(s)	740, 908, 924
AfiI	CCNNNNNNNGG	4 cut(s)	382, 409, 539, 779
AflIII	ACRYGT	1 cut(s)	735
AgsI	TTSAA	4 cut(s)	337, 628, 884, 892
AluBI	AGCT	6 cut(s)	34, 61, 373, 446, 537, 991
AluI	AGCT	6 cut(s)	34, 61, 373, 446, 537, 991
Alw21I	GWGCWC	1 cut(s)	375
Alw26I	GTCTC	1 cut(s)	564
AlwI	GGATC	1 cut(s)	683
Aor13HI	TCCGGA	1 cut(s)	637
AoxI	GGCC	1 cut(s)	208
ApeKI	GCWGC	2 cut(s)	19, 164
ApoI	RAATTY	1 cut(s)	263
Asp700I	GAANNNNTTC	1 cut(s)	977
AspLEI	GCGC	1 cut(s)	593
AsuHPI	GGTGA	1 cut(s)	605
AxyI	CCTNAGG	1 cut(s)	774
BaeGI	GKGCMC	1 cut(s)	120
BalI	TGGCCA	1 cut(s)	210
BanI	GGYRCC	1 cut(s)	115
BanII	GRGCYC	1 cut(s)	375
Bbv12I	GWGCWC	1 cut(s)	375
BbvI	GCAGC	2 cut(s)	31, 176
BccI	CCATC	3 cut(s)	95, 461, 990
BclI	TGATCA	1 cut(s)	25
BcoDI	GTCTC	1 cut(s)	564
BfaI	CTAG	1 cut(s)	534
BisI	GCNGC	2 cut(s)	20, 165
BlsI	GCNGC	2 cut(s)	21, 166
BmiI	GGNNCC	1 cut(s)	117
BmsI	GCATC	3 cut(s)	166, 176, 680
Bpu10I	CCTNAGC	1 cut(s)	750
BsaWI	WCCGGW	2 cut(s)	637, 795
Bsc4I	CCNNNNNNNGG	4 cut(s)	382, 409, 539, 779
Bse1I	ACTGG	3 cut(s)	96, 211, 702
Bse21I	CCTNAGG	1 cut(s)	774
Bse3DI	GCAATG	1 cut(s)	183
BseAI	TCCGGA	1 cut(s)	637
BseGI	GGATG	7 cut(s)	106, 149, 397, 418, 577, 695, 865
BseLI	CCNNNNNNNGG	4 cut(s)	382, 409, 539, 779
BseMI	GCAATG	1 cut(s)	183
BseMII	CTCAG	3 cut(s)	696, 788, 983
BseNI	ACTGG	3 cut(s)	96, 211, 702
BseRI	GAGGAG	3 cut(s)	65, 335, 365
BseSI	GKGCMC	1 cut(s)	120
BseXI	GCAGC	2 cut(s)	31, 176
BseYI	CCCAGC	1 cut(s)	982
BshFI	GGCC	1 cut(s)	210
BshNI	GGYRCC	1 cut(s)	115
BsiHKAI	GWGCWC	1 cut(s)	375
BsiSI	CCGG	2 cut(s)	638, 796
BslI	CCNNNNNNNGG	4 cut(s)	382, 409, 539, 779
BsmAI	GTCTC	1 cut(s)	564
BsnI	GGCC	1 cut(s)	210
Bsp1286I	GDGCHC	2 cut(s)	120, 375
Bsp13I	TCCGGA	1 cut(s)	637
Bsp1407I	TGTACA	1 cut(s)	906
Bsp143I	GATC	3 cut(s)	25, 508, 675
BspACI	CCGC	1 cut(s)	693
BspANI	GGCC	1 cut(s)	210
BspCNI	CTCAG	3 cut(s)	695, 787, 984
BspEI	TCCGGA	1 cut(s)	637
BspHI	TCATGA	3 cut(s)	505, 708, 724
BspLI	GGNNCC	1 cut(s)	117
BspPI	GGATC	1 cut(s)	683
BspT107I	GGYRCC	1 cut(s)	115
BsrDI	GCAATG	1 cut(s)	183
BsrGI	TGTACA	1 cut(s)	906
BsrI	ACTGG	3 cut(s)	96, 211, 702
BssMI	GATC	3 cut(s)	25, 508, 675
Bst4CI	ACNGT	1 cut(s)	398
Bst6I	CTCTTC	1 cut(s)	858
BstAPI	GCANNNNNTGC	1 cut(s)	436
BstAUI	TGTACA	1 cut(s)	906
BstDEI	CTNAG	5 cut(s)	666, 682, 750, 774, 992
BstENI	CCTNNNNNAGG	1 cut(s)	380
BstF5I	GGATG	7 cut(s)	106, 149, 397, 418, 577, 695, 865
BstHHI	GCGC	1 cut(s)	593
BstKTI	GATC	3 cut(s)	28, 511, 678
BstMAI	GTCTC	1 cut(s)	564
BstMBI	GATC	3 cut(s)	25, 508, 675
BstMWI	GCNNNNNNNGC	2 cut(s)	185, 436
BstNSI	RCATGY	1 cut(s)	739
BstSLI	GKGCMC	1 cut(s)	120
BstV1I	GCAGC	2 cut(s)	31, 176
BstX2I	RGATCY	1 cut(s)	675
BstYI	RGATCY	1 cut(s)	675
Bsu36I	CCTNAGG	1 cut(s)	774
BsuRI	GGCC	1 cut(s)	210
BtsCI	GGATG	7 cut(s)	106, 149, 397, 418, 577, 695, 865
BtsIMutI	CAGTG	1 cut(s)	403
CciI	TCATGA	3 cut(s)	505, 708, 724
CfoI	GCGC	1 cut(s)	593
Csp6I	GTAC	3 cut(s)	739, 907, 923
CviAII	CATG	4 cut(s)	506, 709, 725, 736
CviQI	GTAC	3 cut(s)	739, 907, 923
DdeI	CTNAG	5 cut(s)	666, 682, 750, 774, 992
DpnI	GATC	3 cut(s)	27, 510, 677
DpnII	GATC	3 cut(s)	25, 508, 675
EaeI	YGGCCR	1 cut(s)	208
Eam1104I	CTCTTC	1 cut(s)	858
EarI	CTCTTC	1 cut(s)	858
Ecl136II	GAGCTC	1 cut(s)	373
Eco24I	GRGCYC	1 cut(s)	375
Eco32I	GATATC	1 cut(s)	714
Eco53kI	GAGCTC	1 cut(s)	373
Eco57I	CTGAAG	1 cut(s)	468
Eco81I	CCTNAGG	1 cut(s)	774
EcoICRI	GAGCTC	1 cut(s)	373
EcoNI	CCTNNNNNAGG	1 cut(s)	380
EcoRI	GAATTC	1 cut(s)	263
EcoRV	GATATC	1 cut(s)	714
EcoT38I	GRGCYC	1 cut(s)	375
FaeI	CATG	4 cut(s)	509, 712, 728, 739
FalI	AAGNNNNNCTT	2 cut(s)	510, 542
FatI	CATG	4 cut(s)	505, 708, 724, 735
FauNDI	CATATG	1 cut(s)	356
FbaI	TGATCA	1 cut(s)	25
Fnu4HI	GCNGC	2 cut(s)	20, 165
FokI	GGATG	7 cut(s)	113, 156, 404, 425, 564, 702, 872
FriOI	GRGCYC	1 cut(s)	375
Fsp4HI	GCNGC	2 cut(s)	20, 165
FspBI	CTAG	1 cut(s)	534
GlaI	GCGC	1 cut(s)	592
GluI	GCNGC	2 cut(s)	20, 165
GsaI	CCCAGC	1 cut(s)	986
HaeIII	GGCC	1 cut(s)	210
HapII	CCGG	2 cut(s)	638, 796
HhaI	GCGC	1 cut(s)	593
Hin1II	CATG	4 cut(s)	509, 712, 728, 739
Hin6I	GCGC	1 cut(s)	591
HinP1I	GCGC	1 cut(s)	591
HindIII	AAGCTT	1 cut(s)	59
HinfI	GANTC	2 cut(s)	602, 868
HpaII	CCGG	2 cut(s)	638, 796
HphI	GGTGA	1 cut(s)	605
Hpy166II	GTNNAC	2 cut(s)	89, 613
Hpy188I	TCNGA	3 cut(s)	70, 458, 685
Hpy188III	TCNNGA	5 cut(s)	304, 506, 638, 709, 725
Hpy8I	GTNNAC	2 cut(s)	89, 613
HpyAV	CCTTC	2 cut(s)	190, 680
HpyCH4III	ACNGT	1 cut(s)	398
HpyCH4V	TGCA	4 cut(s)	164, 233, 439, 487
HpyF10VI	GCNNNNNNNGC	2 cut(s)	185, 436
HpyF3I	CTNAG	5 cut(s)	666, 682, 750, 774, 992
Hsp92II	CATG	4 cut(s)	509, 712, 728, 739
HspAI	GCGC	1 cut(s)	591
Kpn2I	TCCGGA	1 cut(s)	637
Ksp22I	TGATCA	1 cut(s)	25
Kzo9I	GATC	3 cut(s)	25, 508, 675
LmnI	GCTCC	1 cut(s)	378
Lsp1109I	GCAGC	2 cut(s)	31, 176
LweI	GCATC	3 cut(s)	166, 176, 680
MaeI	CTAG	1 cut(s)	534
MaeIII	GTNAC	3 cut(s)	39, 148, 398
MalI	GATC	3 cut(s)	27, 510, 677
MboI	GATC	3 cut(s)	25, 508, 675
MboII	GAAGA	7 cut(s)	67, 319, 322, 488, 518, 521, 875
MflI	RGATCY	1 cut(s)	675
MhlI	GDGCHC	2 cut(s)	120, 375
MlsI	TGGCCA	1 cut(s)	210
MluCI	AATT	4 cut(s)	159, 195, 263, 423
MluNI	TGGCCA	1 cut(s)	210
MmeI	TCCRAC	1 cut(s)	547
Mox20I	TGGCCA	1 cut(s)	210
MroI	TCCGGA	1 cut(s)	637
MroXI	GAANNNNTTC	1 cut(s)	977
MscI	TGGCCA	1 cut(s)	210
MseI	TTAA	2 cut(s)	198, 660
Msp20I	TGGCCA	1 cut(s)	210
MspA1I	CMGCKG	1 cut(s)	446
MspI	CCGG	2 cut(s)	638, 796
MwoI	GCNNNNNNNGC	2 cut(s)	185, 436
NdeI	CATATG	1 cut(s)	356
NdeII	GATC	3 cut(s)	25, 508, 675
NlaIII	CATG	4 cut(s)	509, 712, 728, 739
NlaIV	GGNNCC	1 cut(s)	117
NmuCI	GTSAC	3 cut(s)	39, 148, 398
NspI	RCATGY	1 cut(s)	739
PagI	TCATGA	3 cut(s)	505, 708, 724
PciI	ACATGT	1 cut(s)	735
PdmI	GAANNNNTTC	1 cut(s)	977
PfeI	GAWTC	2 cut(s)	602, 868
PflFI	GACNNNGTC	1 cut(s)	704
PkrI	GCNGC	2 cut(s)	21, 166
PscI	ACATGT	1 cut(s)	735
Psp124BI	GAGCTC	1 cut(s)	375
PspFI	CCCAGC	1 cut(s)	982
PspN4I	GGNNCC	1 cut(s)	117
PsuI	RGATCY	1 cut(s)	675
PsyI	GACNNNGTC	1 cut(s)	704
PvuII	CAGCTG	1 cut(s)	446
RsaI	GTAC	3 cut(s)	740, 908, 924
RsaNI	GTAC	3 cut(s)	739, 907, 923
SacI	GAGCTC	1 cut(s)	375
SaqAI	TTAA	2 cut(s)	198, 660
SatI	GCNGC	2 cut(s)	20, 165
Sau3AI	GATC	3 cut(s)	25, 508, 675
SduI	GDGCHC	2 cut(s)	120, 375
SfaNI	GCATC	3 cut(s)	166, 176, 680
Sse9I	AATT	4 cut(s)	159, 195, 263, 423
SsiI	CCGC	1 cut(s)	693
SspMI	CTAG	1 cut(s)	534
SstI	GAGCTC	1 cut(s)	375
TaaI	ACNGT	1 cut(s)	398
TaqI	TCGA	3 cut(s)	275, 297, 936
TasI	AATT	4 cut(s)	159, 195, 263, 423
TatI	WGTACW	2 cut(s)	738, 906
TfiI	GAWTC	2 cut(s)	602, 868
Tru1I	TTAA	2 cut(s)	198, 660
Tru9I	TTAA	2 cut(s)	198, 660
TscAI	CASTG	1 cut(s)	403
TseFI	GTSAC	3 cut(s)	39, 148, 398
TseI	GCWGC	2 cut(s)	19, 164
Tsp45I	GTSAC	3 cut(s)	39, 148, 398
TspDTI	ATGAA	9 cut(s)	93, 172, 429, 489, 494, 615, 778, 863, 876
TspGWI	ACGGA	1 cut(s)	156
TspRI	CASTG	1 cut(s)	403
Tth111I	GACNNNGTC	1 cut(s)	704
XagI	CCTNNNNNAGG	1 cut(s)	380
XapI	RAATTY	1 cut(s)	263
XceI	RCATGY	1 cut(s)	739
XmnI	GAANNNNTTC	1 cut(s)	977
XspI	CTAG	1 cut(s)	534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.