Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001122

Physical Location & Seq

Genomic Coordinates Reverse (-)

14116605 .. 14118760

Gene Structure 2156 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G089300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGGCAAAAGGGCAAACCAATGAAGAAGTTGTAGCATCAAGCGACGCATTCATTGCCCCTGAGATCAATTCGTATGGGAAATCATTTAGAGACTACAATGTAGAAAACGAAAGACAGCGAAGCGTGGAAGAATTCTACCGGCTGAACCACATAAATCAAATTTACGATTTCGTGAAGAGGATGAGGGAGGAGTACAAAAAATTGAACAGAGTTGAAATGAGCATATGGGAATGTTGTGAGCTCCTCAATGAGGTTGTGGATGATAGTGACCCTAAATTGGATGAGCCCCAAATTGAGCACTTGTTGCAAACAGCTGAAGCCATAAGAAAAGACTACCCTAATGAAGATTGGCTGCACTTGACTGCTCTTATTCATGACCTTGGAAAAGTGCTTATGCTTCCTAGCTTTGGAGGGCTTCCCCAATGGGTTGTGGTTGGAGACACACACCCTTTAGGGTGTGGTTTTGATGAATATATTGTGCACCACAAGTACTTCAAAGAAAATCTTGACTATAACAACCCTTCCTACAACACCAAATATGGAATTTACTCACAGGGATGTGGACTGGAAAATGTGGTCATGTCATGGGGTCATCATGAGTACATGTACTTAGTGGCCAAGGAAAATGGAACAACCTTGCCTCAGGCTGCCTTGTTCATCATCCGGTACCATTCATTTTACCCTCTGCACAAGGCAGGGGCATATGAACACCTCATGAACAAGGAGGATCAAGAGAATCTCAAGTGGCTTAAGATAATCAACAAGTATGACCTTTACAGCAAAAGCAAAGTTCGAGTTGATGTTGAAAAGGTCAAGACCTATTATTTGTCCCTCATTGACAAGTATTTCCCAACAAAGCTCAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016701 GO:0019752 GO:0019852 GO:0019853 GO:0042364 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046364 GO:0046394 GO:0050113 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00053 ko00562 map00053 map00562

Pfam Domains

Protein Families

MIOX

Protein Analysis

290

Amino Acids

34.14

Weight (kDa)

5.76

Isoelectric Point (pI)

41.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19800 AT4G26260 AT4G26260 AT5G56640 AT5G56640
fragaria_vesca	FvH4_1g06630 FvH4_1g06630 FvH4_5g01690 FvH4_5g20650
malus_domestica	MD02G1069300.v1.1 MD12G1147200.v1.1 MD15G1201000.v1.1
prunus_persica	Prupe.2G089300_v2.0.a1 Prupe.5G054000_v2.0.a1 Prupe.5G054100_v2.0.a1 Prupe.7G216300_v2.0.a1
pyrus_communis	pycom15g17840
rosa_chinensis	RchiOBHm_Chr2g0092361 RchiOBHm_Chr7g0199031 RchiOBHm_Chr7g0206031 RchiOBHm_Chr7g0206141 RchiOBHm_Chr7g0206211
rosa_laevigata	RLG00000003333 RLG00000003336 RLG00000003821 RLG00000003822 RLG00000016303
rosa_multiflora	Rmu_sc0000076.1_g000016 Rmu_sc0003289.1_g000008 Rmu_sc0004084.1_g000023 Rmu_sc0004084.1_g000036 Rmu_sc0007328.1_g000002 Rmu_sc0010737.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149200 Rroxscaffold_3G00251770 Rroxscaffold_3G00251780 Rroxscaffold_3G00251820 Rroxscaffold_3G00257200
rosa_rugosa	Rorug02G0025300.1 Rorug07G0052200 Rorug07G0094600 Rorug07G0094700 Rorug07G0094800
rosa_samantha	Rh2AG071300 Rh7AG175300 Rh7AG226800 Rh7BG178700 Rh7BG223000 Rh7CG184500 Rh7CG240800 Rh7DG178300 Rh7DG232900
rosa_wichuraiana	Rw0G012930 Rw2G006110 Rw7G015380 Rw7G019500 Rw7G019530 Rw7G019580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	666
AccB1I	GGYRCC	1 cut(s)	666
AclWI	GGATC	1 cut(s)	735
AcoI	YGGCCR	1 cut(s)	615
AcsI	RAATTY	3 cut(s)	131, 159, 543
AcuI	CTGAAG	1 cut(s)	336
AfaI	GTAC	5 cut(s)	194, 491, 602, 608, 668
AfiI	CCNNNNNNNGG	3 cut(s)	250, 277, 407
AflII	CTTAAG	1 cut(s)	749
AflIII	ACRYGT	1 cut(s)	603
AgsI	TTSAA	4 cut(s)	205, 215, 496, 806
AluBI	AGCT	4 cut(s)	241, 314, 405, 859
AluI	AGCT	4 cut(s)	241, 314, 405, 859
Alw21I	GWGCWC	3 cut(s)	243, 300, 483
Alw26I	GTCTC	2 cut(s)	84, 432
Alw44I	GTGCAC	1 cut(s)	479
AlwI	GGATC	1 cut(s)	735
AoxI	GGCC	1 cut(s)	615
ApaLI	GTGCAC	1 cut(s)	479
ApeKI	GCWGC	2 cut(s)	352, 647
ApoI	RAATTY	3 cut(s)	131, 159, 543
ArsI	GACNNNNNNTTYG	2 cut(s)	808, 840
Asp718I	GGTACC	1 cut(s)	666
AxyI	CCTNAGG	1 cut(s)	642
BaeGI	GKGCMC	1 cut(s)	483
BalI	TGGCCA	1 cut(s)	617
BanI	GGYRCC	1 cut(s)	666
BanII	GRGCYC	2 cut(s)	243, 288
Bbv12I	GWGCWC	3 cut(s)	243, 300, 483
BbvI	GCAGC	2 cut(s)	339, 634
BccI	CCATC	1 cut(s)	858
BcoDI	GTCTC	2 cut(s)	84, 432
BfaI	CTAG	1 cut(s)	402
BfrI	CTTAAG	1 cut(s)	749
BisI	GCNGC	2 cut(s)	353, 648
BlsI	GCNGC	2 cut(s)	354, 649
BmcAI	AGTACT	1 cut(s)	491
BmiI	GGNNCC	1 cut(s)	668
BmsI	GCATC	1 cut(s)	44
BpuEI	CTTGAG	1 cut(s)	725
BsaJI	CCNNGG	2 cut(s)	379, 618
BsaWI	WCCGGW	1 cut(s)	663
Bsc4I	CCNNNNNNNGG	3 cut(s)	250, 277, 407
Bse118I	RCCGGY	1 cut(s)	138
Bse1I	ACTGG	1 cut(s)	570
Bse21I	CCTNAGG	1 cut(s)	642
Bse3DI	GCAATG	1 cut(s)	51
BseDI	CCNNGG	2 cut(s)	379, 618
BseGI	GGATG	5 cut(s)	186, 265, 286, 563, 660
BseLI	CCNNNNNNNGG	3 cut(s)	250, 277, 407
BseMI	GCAATG	1 cut(s)	51
BseMII	CTCAG	2 cut(s)	51, 656
BseNI	ACTGG	1 cut(s)	570
BseRI	GAGGAG	2 cut(s)	203, 233
BseSI	GKGCMC	1 cut(s)	483
BseXI	GCAGC	2 cut(s)	339, 634
BsgI	GTGCAG	2 cut(s)	338, 671
BshFI	GGCC	1 cut(s)	617
BshNI	GGYRCC	1 cut(s)	666
BsiHKAI	GWGCWC	3 cut(s)	243, 300, 483
BsiSI	CCGG	2 cut(s)	139, 664
BslFI	GGGAC	1 cut(s)	814
BslI	CCNNNNNNNGG	3 cut(s)	250, 277, 407
BsmAI	GTCTC	2 cut(s)	84, 432
BsmFI	GGGAC	1 cut(s)	814
BsmI	GAATGC	1 cut(s)	47
BsnI	GGCC	1 cut(s)	617
Bsp1286I	GDGCHC	4 cut(s)	243, 288, 300, 483
Bsp143I	GATC	2 cut(s)	63, 727
BspANI	GGCC	1 cut(s)	617
BspCNI	CTCAG	2 cut(s)	52, 655
BspHI	TCATGA	3 cut(s)	373, 595, 714
BspLI	GGNNCC	1 cut(s)	668
BspPI	GGATC	1 cut(s)	735
BspT107I	GGYRCC	1 cut(s)	666
BspTI	CTTAAG	1 cut(s)	749
BsrDI	GCAATG	1 cut(s)	51
BsrFI	RCCGGY	1 cut(s)	138
BsrI	ACTGG	1 cut(s)	570
BssAI	RCCGGY	1 cut(s)	138
BssECI	CCNNGG	2 cut(s)	379, 618
BssMI	GATC	2 cut(s)	63, 727
BssT1I	CCWWGG	2 cut(s)	379, 618
Bst6I	CTCTTC	1 cut(s)	170
BstAFI	CTTAAG	1 cut(s)	749
BstAPI	GCANNNNNTGC	2 cut(s)	53, 304
BstDEI	CTNAG	4 cut(s)	60, 610, 642, 860
BstENI	CCTNNNNNAGG	1 cut(s)	248
BstF5I	GGATG	5 cut(s)	186, 265, 286, 563, 660
BstKTI	GATC	2 cut(s)	66, 730
BstMAI	GTCTC	2 cut(s)	84, 432
BstMBI	GATC	2 cut(s)	63, 727
BstMWI	GCNNNNNNNGC	2 cut(s)	53, 304
BstNSI	RCATGY	1 cut(s)	607
BstSLI	GKGCMC	1 cut(s)	483
BstV1I	GCAGC	2 cut(s)	339, 634
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	1 cut(s)	617
BtsCI	GGATG	5 cut(s)	186, 265, 286, 563, 660
CciI	TCATGA	3 cut(s)	373, 595, 714
Cfr10I	RCCGGY	1 cut(s)	138
CseI	GACGC	1 cut(s)	53
Csp6I	GTAC	5 cut(s)	193, 490, 601, 607, 667
CviAII	CATG	6 cut(s)	374, 580, 585, 596, 604, 715
CviQI	GTAC	5 cut(s)	193, 490, 601, 607, 667
DdeI	CTNAG	4 cut(s)	60, 610, 642, 860
DpnI	GATC	2 cut(s)	65, 729
DpnII	GATC	2 cut(s)	63, 727
EaeI	YGGCCR	1 cut(s)	615
Eam1104I	CTCTTC	1 cut(s)	170
EarI	CTCTTC	1 cut(s)	170
Ecl136II	GAGCTC	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	379, 618
Eco24I	GRGCYC	2 cut(s)	243, 288
Eco53kI	GAGCTC	1 cut(s)	241
Eco57I	CTGAAG	1 cut(s)	336
Eco81I	CCTNAGG	1 cut(s)	642
EcoICRI	GAGCTC	1 cut(s)	241
EcoNI	CCTNNNNNAGG	1 cut(s)	248
EcoRI	GAATTC	1 cut(s)	131
EcoT14I	CCWWGG	2 cut(s)	379, 618
EcoT38I	GRGCYC	2 cut(s)	243, 288
ErhI	CCWWGG	2 cut(s)	379, 618
FaeI	CATG	6 cut(s)	377, 583, 588, 599, 607, 718
FalI	AAGNNNNNCTT	2 cut(s)	489, 521
FaqI	GGGAC	1 cut(s)	814
FatI	CATG	6 cut(s)	373, 579, 584, 595, 603, 714
FauNDI	CATATG	2 cut(s)	224, 703
Fnu4HI	GCNGC	2 cut(s)	353, 648
FokI	GGATG	5 cut(s)	193, 272, 293, 570, 647
FriOI	GRGCYC	2 cut(s)	243, 288
Fsp4HI	GCNGC	2 cut(s)	353, 648
FspBI	CTAG	1 cut(s)	402
GluI	GCNGC	2 cut(s)	353, 648
HaeIII	GGCC	1 cut(s)	617
HapII	CCGG	2 cut(s)	139, 664
HgaI	GACGC	1 cut(s)	53
Hin1II	CATG	6 cut(s)	377, 583, 588, 599, 607, 718
HinfI	GANTC	1 cut(s)	736
HpaII	CCGG	2 cut(s)	139, 664
Hpy166II	GTNNAC	2 cut(s)	481, 563
Hpy188I	TCNGA	1 cut(s)	863
Hpy188III	TCNNGA	7 cut(s)	172, 374, 506, 596, 715, 731, 814
Hpy8I	GTNNAC	2 cut(s)	481, 563
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	1 cut(s)	531
HpyCH4V	TGCA	4 cut(s)	307, 355, 481, 688
HpyF10VI	GCNNNNNNNGC	2 cut(s)	53, 304
HpyF3I	CTNAG	4 cut(s)	60, 610, 642, 860
Hsp92II	CATG	6 cut(s)	377, 583, 588, 599, 607, 718
KpnI	GGTACC	1 cut(s)	670
Kzo9I	GATC	2 cut(s)	63, 727
LmnI	GCTCC	1 cut(s)	246
LpnPI	CCDG	7 cut(s)	72, 152, 539, 551, 629, 677, 681
Lsp1109I	GCAGC	2 cut(s)	339, 634
LweI	GCATC	1 cut(s)	44
MaeI	CTAG	1 cut(s)	402
MaeIII	GTNAC	1 cut(s)	266
MalI	GATC	2 cut(s)	65, 729
MboI	GATC	2 cut(s)	63, 727
MboII	GAAGA	4 cut(s)	35, 140, 187, 356
MhlI	GDGCHC	4 cut(s)	243, 288, 300, 483
MlsI	TGGCCA	1 cut(s)	617
MluCI	AATT	7 cut(s)	67, 131, 159, 200, 275, 291, 543
MluNI	TGGCCA	1 cut(s)	617
MmeI	TCCRAC	1 cut(s)	415
Mox20I	TGGCCA	1 cut(s)	617
MscI	TGGCCA	1 cut(s)	617
MseI	TTAA	1 cut(s)	750
MslI	CAYNNNNRTG	1 cut(s)	556
Msp20I	TGGCCA	1 cut(s)	617
MspA1I	CMGCKG	1 cut(s)	314
MspCI	CTTAAG	1 cut(s)	749
MspI	CCGG	2 cut(s)	139, 664
Mva1269I	GAATGC	1 cut(s)	47
MwoI	GCNNNNNNNGC	2 cut(s)	53, 304
NdeI	CATATG	2 cut(s)	224, 703
NdeII	GATC	2 cut(s)	63, 727
NlaIII	CATG	6 cut(s)	377, 583, 588, 599, 607, 718
NlaIV	GGNNCC	1 cut(s)	668
NmuCI	GTSAC	1 cut(s)	266
NspI	RCATGY	1 cut(s)	607
PagI	TCATGA	3 cut(s)	373, 595, 714
PciI	ACATGT	1 cut(s)	603
PctI	GAATGC	1 cut(s)	47
PfeI	GAWTC	1 cut(s)	736
PkrI	GCNGC	2 cut(s)	354, 649
PscI	ACATGT	1 cut(s)	603
Psp124BI	GAGCTC	1 cut(s)	243
PspN4I	GGNNCC	1 cut(s)	668
PvuII	CAGCTG	1 cut(s)	314
RsaI	GTAC	5 cut(s)	194, 491, 602, 608, 668
RsaNI	GTAC	5 cut(s)	193, 490, 601, 607, 667
RseI	CAYNNNNRTG	1 cut(s)	556
SacI	GAGCTC	1 cut(s)	243
SaqAI	TTAA	1 cut(s)	750
SatI	GCNGC	2 cut(s)	353, 648
Sau3AI	GATC	2 cut(s)	63, 727
ScaI	AGTACT	1 cut(s)	491
SduI	GDGCHC	4 cut(s)	243, 288, 300, 483
SfaNI	GCATC	1 cut(s)	44
SmiMI	CAYNNNNRTG	1 cut(s)	556
SmlI	CTYRAG	2 cut(s)	740, 749
SmoI	CTYRAG	2 cut(s)	740, 749
Sse9I	AATT	7 cut(s)	67, 131, 159, 200, 275, 291, 543
SspMI	CTAG	1 cut(s)	402
SstI	GAGCTC	1 cut(s)	243
StyI	CCWWGG	2 cut(s)	379, 618
TaqI	TCGA	1 cut(s)	793
TasI	AATT	7 cut(s)	67, 131, 159, 200, 275, 291, 543
TatI	WGTACW	4 cut(s)	192, 489, 600, 606
TfiI	GAWTC	1 cut(s)	736
Tru1I	TTAA	1 cut(s)	750
Tru9I	TTAA	1 cut(s)	750
TseFI	GTSAC	1 cut(s)	266
TseI	GCWGC	2 cut(s)	352, 647
Tsp45I	GTSAC	1 cut(s)	266
TspDTI	ATGAA	9 cut(s)	36, 40, 357, 362, 483, 646, 663, 720, 731
Vha464I	CTTAAG	1 cut(s)	749
VneI	GTGCAC	1 cut(s)	479
XagI	CCTNNNNNAGG	1 cut(s)	248
XapI	RAATTY	3 cut(s)	131, 159, 543
XceI	RCATGY	1 cut(s)	607
XspI	CTAG	1 cut(s)	402
ZrmI	AGTACT	1 cut(s)	491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.