Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002362

Physical Location & Seq

Genomic Coordinates Forward (+)

4962149 .. 4966170

Gene Structure 4022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G15280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3684 bp

ATGCTTAATCTTCTCTCCATCAGTAGCTCTTCTCGGCTTCGTTTTCTTAACAAGGTTTCTTCACTCACATATCATTACTCTTTCGCGTTTTTCTCTACTAGCTCACCTGCTTCGTCCTCTTCTTCTTCCTTGGGAAATGATTCAGCGATCCCAAGAAATTATGAGTCTTCCTCGTTTAATTTACTTTCGAGGTCGAAGGAGAAGCGTGACCTTACTGGTTCCTCTCTAAAAGACTTGCTTTTTGATTTGTCAGATGTAGTTCCCAATATTACCCGTAGGTTTAGAAGATTTCCGGGCTTGAAACCCGAAGATGTGCTTGAATTATCATTGGGTTTTGAATCTGAGCTTCAGAGAGGTGGAATTGGAAATATAAAGGTTCAAGCTTTATGGGAGATTTTCAGATGGGCTAGTGTGCAATACCAAGGGTTTAAGCATTTACCTCAGGCTTGTGAAATTATGGCGTCGATGCTTATCAGGGAAGGAATGGTTAAGGAAGTTGAATTGTTGCTTATGGAGATGGAGAGACATGGAGACACAATGGTTAACGAGGGGATTTTCTGTGATTTGATTGGTAAATATGTTGATGATTTCGATTCCAGGAAAGCAGTTATGCTGTTTGATTGGATGAGGCGTAAGGGTTTAGTACCTCTAACTTCGTGTTATCAGATTCTAATTGATCAATTGGTTAGAGTTCATAGAACAGAATCAGCTTATAGAATTTGTTTGGATTGGGTGGAGACAAGGGCTGAATTAAATCACATGAACATAGATAGCATCGGGAAAGTTATAGAGTTGCTTTGTTTGGACCAGAAGGTTCAGGAGGCTAGAGTTCTGGCAAGAAAGCTTGTGGCTTTAGGTTGTATCCTGAATAGCTCAATATATAGTAAGATTACTATAGGATACAACGAGAAGCAAGACTTTGAGGATTTGTTGAGTTTCATTGGTGAAGTTAAATATGAACCTGATGTGTTTGTTGGCAATAGGATTCTGCATTCTCTCTGCAGGAGGTTTGGCTCAGAGAGAGCTTATGTATATATGGAGGAACTCGAACACTTGGGTTTTAAACAAGATGAAGTTACCTTTGGTATCTTGATTGGTTGGTGTTGCTATGAAGGAGATATTAAAAGAGCGGTTCTTTATTTATCCGAGATTATGTCAAAGGGTTATAAACCCGATGTGTATAGTTATAATGCTATCCTAAGTGGGCTTTTTAGAAAAGGATTGTGGCAACATACCCATTGTATTCTGGATGAGATGAAGGAAAATGGAATGATGCTCAGCTTGTCTACTTTTAAGATAATGGTAACTGGATACTGCAAAGCTAGACAGTTTGAAGAAGCGAAGAGGATTGTCAACAAGATGTTTGGTTATGGGTTAATCGAAGCATCTAAAGTTGAGGATCCACTTTCAGAAGCTTTTAGTTTGGTAGGATTTGATCCGTTAGCTGTTAGATTGAAAAGGGACAATGATTCCACATTTTCCAAAGCTGAGTTCTTTGATGATCTTGGGAATGGGCTATACTTGCACACTGATTTGGATGCTTACGAGCAGAGGGTGAATATGGTACTTGACAGGTCCGTGCTACCGGAGTTTAATTCGCTTATCGTTAGAGCATCTGAGGACGGTGATTTACAAACAGCATTGCGGCTTCTTGATGAAATGGCTCGATGGGGTCAGAAACTATCGCGTCGGAGTTTTGCTGTTTTAATGAGGAGTCTCTGTGCATCGCGTGCCCATCTCAGAGTAAGTATTAGTTTATTGGAAAAATGGCCAAAGCTGGCTTATCAGTTAGATGGAGAAACCCTTAATTTTCTTGTCCAAGAATATTGCAAGAAGGGATTTAGTCGCCATAGCAAACTCATTTTCCATAAAATGGTTCAAATGCATCATCCTATCGATAACGTAACTTACACATCTTTGATACGTTGTTTCTGTAAGAAAGAAACACTCAATGATCTTCTGAATGTCTGGGGTGCTGCCCAGAATGATAACTGGTTACCTGATTTGAACGATTGCGGAGATCTGTGGAACTGTCTTGTCCGGAAAGGATTGGTGGAGGAAGTGGTTCAACTCTTTGAGCGTGTATTCATATCTTATCCTCTATCTCAGTCAGAAGCGTGTAGGATTTTTGTCGAGAAGCTGACAGTTCTTGGGTTTTCTTGTATCGCTCATTCTGTTGTTAAAAGGCTTGAAGGAGAGGGTTGCATTGTGGAACAAGAGGTTTACAATCATCTTATCAAAGGACTCTGCACGGAAAAGAAGGATTCAGCTGCATTTGCTATACTCGATGAAATGCTAGACAAGAAACACATTCCAAGTTTGGGAAGTTGTTTGATGTTGATTCCTCGGCTTTGTAGAGCTAACAAAGCAGGAACAGCATTTAATTTAGCAGAGCAAATAGATTCATCCTATGTACACTATGCTTTGATAAAAGGATTAAGCTTAGCTGGGAAAATGCTCGATGCAGAAAATCAGTTACGTATAATGTTATCAAACGGGCTTTCATCGTATAACAAAATCTACAATGTGATGTTTCAAGGTTATTGTAAAGGTAACAACTGGATGAAAGTTGAGGAAGTACTAGGACTCATGGTGAGGAAGAACATAATCTGTTCAGTTAAGAGTTACAGAGAATATGTTCGAAAAATGTGTTTAGAGCCTCAGTCTCTCTCTGCAATTAGTCTGAAGGAGTTTCTGTTGCTAGGAGAAAGCAATCCTGGTGGCGTAATCATCTATAATATGCTGATTTTCTATATGTTCAGGGCAAAGAATCACTTGGAGGTTAACAAAGTCTTGCTCGAAATGCAGGGAAGAGGAGTGTTGCCTGATGAAACCACATTTAACTTTCTCGTTCACGGATACTCTTCGTCTGCAGATTATTCGAGTTCTCTGCGATATCTCTCAGCTATGATCTCCAAGGGGATGAAACCGAATAATCGAAGCTTAAGAGCGGTTACAAGCTCTCTGTGTGATAATGGAGATGTGAAGAAAGCTCTTGACTTGTGGCAGGTAATGGAATCAAAAGGCTGGAATTTAGGTTCTTCAGTTGTCCAAACCAAAATCGTCGAAACCCTGATTTCGAAAGGCGAAATTCCAAAAGCTGAAGACTTTCTGACCCGTGTGACACGCAATGGCATGATGGCTCCCAACTATGATAATATAATCAAGAAACTATCTGATCGCGGGAATCTTGACATTGCGGTTCATCTCTTGAACACAATGTTAAAGAACCAAAGCATTCCGGGTTCTTCAAGCTATGATTCAGTCATCAATGGCTTGCTGAGATACAATCAACTGGATAAAGCTATGGACTTTCATACAGAAATGGTGGAGTTAGGTTTAAGTCCGAGCATAAGTACATGGAGTGGTCTTGTTCATAAGTTCTGTGAGGCATGTCAAGTTTTGGAATCAGAAAGACTTATCAAATCAATGGTTGGGTTAGGCGAATCACCGAGTCAAGAGATGTTTAAGACTGTGATTGATCGGTTTCGAGTAGAGAAGAATACAGTGAAAGCTTCAGAGATGATGGAAATGATGCAAAAGTGTGGGTATGAAGTTGATTTTGAGACTCATTGGTCTTTGATTAGTAACATGAGCTCTTCTAAAGAGAAGAAGACAACAACAGCTGGTGAAGGATTCTTATCTAGGCTTCTCTCTGGGAATGGGTTTACTTGGAAGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048037 GO:0051536 GO:0051540 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

1227

Amino Acids

139.61

Weight (kDa)

7.64

Isoelectric Point (pI)

41.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	357 - 404	8.8e-09	PPR repeat family
PPR_2	PF13041	391 - 440	5.7e-11	PPR repeat family
PPR_2	PF13041	601 - 646	1.1e-06	PPR repeat family
PPR_2	PF13041	909 - 954	1.9e-08	PPR repeat family
PPR_2	PF13041	1081 - 1129	2.2e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15280
fragaria_vesca	FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880
malus_domestica	MD09G1053400.v1.1
prunus_persica	Prupe.3G265200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581
rosa_laevigata	RLG00000021724 RLG00000021736
rosa_multiflora	Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002
rosa_roxburghii	Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440
rosa_rugosa	Rorug02G0530600
rosa_samantha	Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700
rosa_wichuraiana	Rw2G049750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1167, 1188
AarI	CACCTGC	1 cut(s)	115
AasI	GACNNNNNNGTC	1 cut(s)	3574
Acc36I	ACCTGC	2 cut(s)	115, 2998
AccB7I	CCANNNNNTGG	1 cut(s)	1873
AccBSI	CCGCTC	2 cut(s)	1130, 2951
AccI	GTMKAC	1 cut(s)	1286
AccII	CGCG	4 cut(s)	86, 1687, 1729, 3183
AccIII	TCCGGA	1 cut(s)	2040
AciI	CCGC	6 cut(s)	1130, 1645, 2016, 2951, 3183, 3200
AclWI	GGATC	4 cut(s)	142, 1394, 1407, 1430
AcoI	YGGCCR	1 cut(s)	1769
AcsI	RAATTY	3 cut(s)	717, 3031, 3090
AcuI	CTGAAG	5 cut(s)	332, 2705, 3027, 3123, 3501
AcyI	GRCGYC	1 cut(s)	461
AfaI	GTAC	5 cut(s)	645, 1566, 2415, 2580, 3358
AfiI	CCNNNNNNNGG	2 cut(s)	1873, 2321
AflII	CTTAAG	1 cut(s)	2944
AjnI	CCWGG	2 cut(s)	596, 2716
AjuI	GAANNNNNNNTTGG	4 cut(s)	1065, 1097, 1475, 1507
AloI	GAACNNNNNNTCC	2 cut(s)	3022, 3054
Alw21I	GWGCWC	1 cut(s)	3599
Alw26I	GTCTC	6 cut(s)	517, 525, 731, 1721, 2670, 3560
AlwI	GGATC	4 cut(s)	142, 1394, 1407, 1430
Aor13HI	TCCGGA	1 cut(s)	2040
AoxI	GGCC	1 cut(s)	1769
ApeKI	GCWGC	2 cut(s)	1976, 2270
ApoI	RAATTY	3 cut(s)	717, 3031, 3090
ArsI	GACNNNNNNTTYG	2 cut(s)	224, 256
Asp700I	GAANNNNTTC	4 cut(s)	139, 2064, 2637, 3108
AspS9I	GGNCC	2 cut(s)	805, 1575
AsuC2I	CCSGG	2 cut(s)	294, 3243
AsuHPI	GGTGA	7 cut(s)	96, 956, 1567, 1637, 2605, 3441, 3641
AsuII	TTCGAA	2 cut(s)	2641, 3080
AvaII	GGWCC	2 cut(s)	805, 1575
AxyI	CCTNAGG	1 cut(s)	441
BaeGI	GKGCMC	1 cut(s)	1735
BalI	TGGCCA	1 cut(s)	1771
BamHI	GGATCC	1 cut(s)	1399
BanII	GRGCYC	1 cut(s)	3599
BbsI	GAAGAC	3 cut(s)	159, 3111, 3620
Bbv12I	GWGCWC	1 cut(s)	3599
BbvI	GCAGC	2 cut(s)	1963, 2257
BccI	CCATC	8 cut(s)	26, 396, 511, 1662, 1743, 1787, 3133, 3520
BcgI	CGANNNNNNTGC	4 cut(s)	2862, 2872, 2896, 2906
BciT130I	CCWGG	2 cut(s)	598, 2718
BciVI	GTATCC	4 cut(s)	872, 893, 1304, 2852
BclI	TGATCA	1 cut(s)	676
BcnI	CCSGG	2 cut(s)	294, 3243
BcoDI	GTCTC	6 cut(s)	517, 525, 731, 1721, 2670, 3560
BfaI	CTAG	8 cut(s)	99, 408, 825, 1323, 2297, 2582, 2702, 3645
BfmI	CTRYAG	3 cut(s)	894, 1000, 2871
BfrI	CTTAAG	1 cut(s)	2944
BfuAI	ACCTGC	2 cut(s)	115, 2998
BfuI	GTATCC	4 cut(s)	872, 893, 1304, 2852
BglII	AGATCT	1 cut(s)	2020
BisI	GCNGC	3 cut(s)	1646, 1977, 2271
BlpI	GCTNAGC	2 cut(s)	1277, 2443
BlsI	GCNGC	3 cut(s)	1647, 1978, 2272
BmcAI	AGTACT	1 cut(s)	2580
Bme1390I	CCNGG	4 cut(s)	294, 598, 2718, 3243
Bme18I	GGWCC	2 cut(s)	805, 1575
BmgT120I	GGNCC	2 cut(s)	805, 1575
BmiI	GGNNCC	3 cut(s)	220, 1401, 3144
BmrFI	CCNGG	4 cut(s)	294, 598, 2718, 3243
BpiI	GAAGAC	3 cut(s)	159, 3111, 3620
BplI	GAGNNNNNCTC	2 cut(s)	155, 187
Bpu1102I	GCTNAGC	2 cut(s)	1277, 2443
Bpu14I	TTCGAA	2 cut(s)	2641, 3080
BpuMI	CCSGG	2 cut(s)	294, 3243
Bsa29I	ATCGAT	1 cut(s)	1896
BsaAI	YACGTR	1 cut(s)	2480
BsaBI	GATNNNNATC	2 cut(s)	470, 3640
BsaHI	GRCGYC	1 cut(s)	461
BsaJI	CCNNGG	4 cut(s)	129, 421, 2345, 2916
BsaWI	WCCGGW	2 cut(s)	1585, 2040
BsaXI	ACNNNNNCTCC	4 cut(s)	1705, 1735, 2681, 2711
Bsc4I	CCNNNNNNNGG	2 cut(s)	1873, 2321
Bse1I	ACTGG	5 cut(s)	220, 1312, 1997, 2564, 3300
Bse21I	CCTNAGG	1 cut(s)	441
Bse3DI	GCAATG	3 cut(s)	1640, 3136, 3195
Bse8I	GATNNNNATC	2 cut(s)	470, 3640
BseAI	TCCGGA	1 cut(s)	2040
BseBI	CCWGG	2 cut(s)	598, 2718
BseCI	ATCGAT	1 cut(s)	1896
BseDI	CCNNGG	4 cut(s)	129, 421, 2345, 2916
BseGI	GGATG	7 cut(s)	630, 1255, 1543, 1888, 2405, 2568, 2928
BseJI	GATNNNNATC	2 cut(s)	470, 3640
BseLI	CCNNNNNNNGG	2 cut(s)	1873, 2321
BseMI	GCAATG	3 cut(s)	1640, 3136, 3195
BseNI	ACTGG	5 cut(s)	220, 1312, 1997, 2564, 3300
BseRI	GAGGAG	2 cut(s)	1726, 2829
BseSI	GKGCMC	1 cut(s)	1735
BseXI	GCAGC	2 cut(s)	1963, 2257
BseYI	CCCAGC	1 cut(s)	2447
BsgI	GTGCAG	1 cut(s)	2233
Bsh1236I	CGCG	4 cut(s)	86, 1687, 1729, 3183
BshFI	GGCC	1 cut(s)	1771
BshVI	ATCGAT	1 cut(s)	1896
BsiHKAI	GWGCWC	1 cut(s)	3599
BsiSI	CCGG	4 cut(s)	293, 1586, 2041, 3242
BslFI	GGGAC	1 cut(s)	1475
BslI	CCNNNNNNNGG	2 cut(s)	1873, 2321
BsmAI	GTCTC	6 cut(s)	517, 525, 731, 1721, 2670, 3560
BsmFI	GGGAC	1 cut(s)	1475
BsmI	GAATGC	2 cut(s)	991, 3237
BsnI	GGCC	1 cut(s)	1771
Bsp119I	TTCGAA	2 cut(s)	2641, 3080
Bsp1286I	GDGCHC	2 cut(s)	1735, 3599
Bsp13I	TCCGGA	1 cut(s)	2040
Bsp1407I	TGTACA	1 cut(s)	2413
Bsp1720I	GCTNAGC	2 cut(s)	1277, 2443
BspACI	CCGC	6 cut(s)	1130, 1645, 2016, 2951, 3183, 3200
BspANI	GGCC	1 cut(s)	1771
BspDI	ATCGAT	1 cut(s)	1896
BspEI	TCCGGA	1 cut(s)	2040
BspFNI	CGCG	4 cut(s)	86, 1687, 1729, 3183
BspLI	GGNNCC	3 cut(s)	220, 1401, 3144
BspMAI	CTGCAG	2 cut(s)	1004, 2875
BspMI	ACCTGC	2 cut(s)	115, 2998
BspPI	GGATC	4 cut(s)	142, 1394, 1407, 1430
BspQI	GCTCTTC	2 cut(s)	34, 3604
BspT104I	TTCGAA	2 cut(s)	2641, 3080
BspTI	CTTAAG	1 cut(s)	2944
BsrBI	CCGCTC	2 cut(s)	1130, 2951
BsrDI	GCAATG	3 cut(s)	1640, 3136, 3195
BsrGI	TGTACA	1 cut(s)	2413
BsrI	ACTGG	5 cut(s)	220, 1312, 1997, 2564, 3300
BssECI	CCNNGG	4 cut(s)	129, 421, 2345, 2916
BssNI	GRCGYC	1 cut(s)	461
BssT1I	CCWWGG	3 cut(s)	129, 421, 2916
Bst2UI	CCWGG	2 cut(s)	598, 2718
Bst4CI	ACNGT	6 cut(s)	1329, 1625, 2033, 2146, 3475, 3508
Bst6I	CTCTTC	6 cut(s)	34, 124, 1337, 2806, 2869, 3604
BstACI	GRCGYC	1 cut(s)	461
BstAFI	CTTAAG	1 cut(s)	2944
BstAPI	GCANNNNNTGC	1 cut(s)	1730
BstAUI	TGTACA	1 cut(s)	2413
BstBAI	YACGTR	1 cut(s)	2480
BstBI	TTCGAA	2 cut(s)	2641, 3080
BstC8I	GCNNGC	3 cut(s)	1731, 1779, 3278
BstEII	GGTNACC	1 cut(s)	1995
BstF5I	GGATG	7 cut(s)	630, 1255, 1543, 1888, 2405, 2568, 2928
BstFNI	CGCG	4 cut(s)	86, 1687, 1729, 3183
BstMAI	GTCTC	6 cut(s)	517, 525, 731, 1721, 2670, 3560
BstMWI	GCNNNNNNNGC	6 cut(s)	1522, 1730, 2276, 2366, 2375, 2803
BstNI	CCWGG	2 cut(s)	598, 2718
BstNSI	RCATGY	1 cut(s)	3396
BstPI	GGTNACC	1 cut(s)	1995
BstSCI	CCNGG	4 cut(s)	292, 596, 2716, 3241
BstSFI	CTRYAG	3 cut(s)	894, 1000, 2871
BstSLI	GKGCMC	1 cut(s)	1735
BstSNI	TACGTA	1 cut(s)	2480
BstUI	CGCG	4 cut(s)	86, 1687, 1729, 3183
BstV1I	GCAGC	2 cut(s)	1963, 2257
BstV2I	GAAGAC	3 cut(s)	159, 3111, 3620
BstX2I	RGATCY	2 cut(s)	1399, 2020
BstYI	RGATCY	2 cut(s)	1399, 2020
Bsu15I	ATCGAT	1 cut(s)	1896
Bsu36I	CCTNAGG	1 cut(s)	441
BsuI	GTATCC	4 cut(s)	872, 893, 1304, 2852
BsuRI	GGCC	1 cut(s)	1771
BsuTUI	ATCGAT	1 cut(s)	1896
BtgZI	GCGATG	1 cut(s)	1710
BtsCI	GGATG	7 cut(s)	630, 1255, 1543, 1888, 2405, 2568, 2928
BtsIMutI	CAGTG	2 cut(s)	1527, 3513
BveI	ACCTGC	2 cut(s)	115, 2998
Cac8I	GCNNGC	3 cut(s)	1731, 1779, 3278
Cfr13I	GGNCC	2 cut(s)	805, 1575
ClaI	ATCGAT	1 cut(s)	1896
CseI	GACGC	2 cut(s)	450, 1676
Csp6I	GTAC	5 cut(s)	644, 1565, 2414, 2579, 3357
CspCI	CAANNNNNGTGG	2 cut(s)	2701, 2736
CviAII	CATG	7 cut(s)	527, 760, 2590, 3136, 3360, 3393, 3592
CviQI	GTAC	5 cut(s)	644, 1565, 2414, 2579, 3357
DraI	TTTAAA	1 cut(s)	1063
DrdI	GACNNNNNNGTC	1 cut(s)	3574
DseDI	GACNNNNNNGTC	1 cut(s)	3574
EaeI	YGGCCR	1 cut(s)	1769
Eam1104I	CTCTTC	6 cut(s)	34, 124, 1337, 2806, 2869, 3604
EarI	CTCTTC	6 cut(s)	34, 124, 1337, 2806, 2869, 3604
Ecl136II	GAGCTC	1 cut(s)	3597
Eco105I	TACGTA	1 cut(s)	2480
Eco130I	CCWWGG	3 cut(s)	129, 421, 2916
Eco24I	GRGCYC	1 cut(s)	3599
Eco32I	GATATC	1 cut(s)	2897
Eco47I	GGWCC	2 cut(s)	805, 1575
Eco53kI	GAGCTC	1 cut(s)	3597
Eco57I	CTGAAG	5 cut(s)	332, 2705, 3027, 3123, 3501
Eco81I	CCTNAGG	1 cut(s)	441
Eco91I	GGTNACC	1 cut(s)	1995
EcoICRI	GAGCTC	1 cut(s)	3597
EcoO65I	GGTNACC	1 cut(s)	1995
EcoRII	CCWGG	2 cut(s)	596, 2716
EcoRV	GATATC	1 cut(s)	2897
EcoT14I	CCWWGG	3 cut(s)	129, 421, 2916
EcoT22I	ATGCAT	1 cut(s)	1887
EcoT38I	GRGCYC	1 cut(s)	3599
ErhI	CCWWGG	3 cut(s)	129, 421, 2916
FaeI	CATG	7 cut(s)	530, 763, 2593, 3139, 3363, 3396, 3595
FalI	AAGNNNNNCTT	8 cut(s)	222, 254, 300, 332, 902, 934, 2759, 2791
FaqI	GGGAC	1 cut(s)	1475
FatI	CATG	7 cut(s)	526, 759, 2589, 3135, 3359, 3392, 3591
FauI	CCCGC	1 cut(s)	3176
FbaI	TGATCA	1 cut(s)	676
FblI	GTMKAC	1 cut(s)	1286
Fnu4HI	GCNGC	3 cut(s)	1646, 1977, 2271
FokI	GGATG	7 cut(s)	637, 1262, 1550, 1875, 2392, 2575, 2935
FriOI	GRGCYC	1 cut(s)	3599
Fsp4HI	GCNGC	3 cut(s)	1646, 1977, 2271
FspBI	CTAG	8 cut(s)	99, 408, 825, 1323, 2297, 2582, 2702, 3645
GluI	GCNGC	3 cut(s)	1646, 1977, 2271
GsaI	CCCAGC	1 cut(s)	2451
HaeIII	GGCC	1 cut(s)	1771
HapII	CCGG	4 cut(s)	293, 1586, 2041, 3242
HgaI	GACGC	2 cut(s)	450, 1676
Hin1I	GRCGYC	1 cut(s)	461
Hin1II	CATG	7 cut(s)	530, 763, 2593, 3139, 3363, 3396, 3595
HincII	GTYRAC	3 cut(s)	544, 1354, 2785
HindII	GTYRAC	3 cut(s)	544, 1354, 2785
HindIII	AAGCTT	6 cut(s)	381, 842, 1413, 2440, 2941, 3513
HpaI	GTTAAC	2 cut(s)	544, 2785
HpaII	CCGG	4 cut(s)	293, 1586, 2041, 3242
HphI	GGTGA	7 cut(s)	96, 956, 1567, 1637, 2605, 3441, 3641
Hpy166II	GTNNAC	8 cut(s)	544, 1287, 1354, 2224, 2416, 2785, 2854, 3669
Hpy8I	GTNNAC	8 cut(s)	544, 1287, 1354, 2224, 2416, 2785, 2854, 3669
Hpy99I	CGWCG	3 cut(s)	466, 1692, 3068
HpyCH4III	ACNGT	6 cut(s)	1329, 1625, 2033, 2146, 3475, 3508
HpyCH4IV	ACGT	3 cut(s)	1902, 1924, 2479
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1522, 1730, 2276, 2366, 2375, 2803
HpySE526I	ACGT	3 cut(s)	1902, 1924, 2479
Hsp92I	GRCGYC	1 cut(s)	461
Hsp92II	CATG	7 cut(s)	530, 763, 2593, 3139, 3363, 3396, 3595
Kpn2I	TCCGGA	1 cut(s)	2040
Ksp22I	TGATCA	1 cut(s)	676
KspAI	GTTAAC	2 cut(s)	544, 2785
LguI	GCTCTTC	2 cut(s)	34, 3604
LmnI	GCTCC	1 cut(s)	3148
Lsp1109I	GCAGC	2 cut(s)	1963, 2257
MaeI	CTAG	8 cut(s)	99, 408, 825, 1323, 2297, 2582, 2702, 3645
MaeII	ACGT	3 cut(s)	1902, 1924, 2479
MbiI	CCGCTC	2 cut(s)	1130, 2951
MfeI	CAATTG	1 cut(s)	680
MflI	RGATCY	2 cut(s)	1399, 2020
MhlI	GDGCHC	2 cut(s)	1735, 3599
MlsI	TGGCCA	1 cut(s)	1771
MluNI	TGGCCA	1 cut(s)	1771
MlyI	GAGTC	6 cut(s)	173, 1723, 2238, 2580, 3463, 3562
MmeI	TCCRAC	1 cut(s)	1670
Mox20I	TGGCCA	1 cut(s)	1771
Mph1103I	ATGCAT	1 cut(s)	1887
MroI	TCCGGA	1 cut(s)	2040
MroXI	GAANNNNTTC	4 cut(s)	139, 2064, 2637, 3108
MscI	TGGCCA	1 cut(s)	1771
Msp20I	TGGCCA	1 cut(s)	1771
MspA1I	CMGCKG	2 cut(s)	2270, 3626
MspCI	CTTAAG	1 cut(s)	2944
MspI	CCGG	4 cut(s)	293, 1586, 2041, 3242
MspR9I	CCNGG	4 cut(s)	294, 598, 2718, 3243
MunI	CAATTG	1 cut(s)	680
Mva1269I	GAATGC	2 cut(s)	991, 3237
MvaI	CCWGG	2 cut(s)	598, 2718
MvnI	CGCG	4 cut(s)	86, 1687, 1729, 3183
MwoI	GCNNNNNNNGC	6 cut(s)	1522, 1730, 2276, 2366, 2375, 2803
NciI	CCSGG	2 cut(s)	294, 3243
NlaIII	CATG	7 cut(s)	530, 763, 2593, 3139, 3363, 3396, 3595
NlaIV	GGNNCC	3 cut(s)	220, 1401, 3144
NmeAIII	GCCGAG	2 cut(s)	13, 2326
NmuCI	GTSAC	2 cut(s)	206, 3121
NsiI	ATGCAT	1 cut(s)	1887
NspI	RCATGY	1 cut(s)	3396
NspV	TTCGAA	2 cut(s)	2641, 3080
PaqCI	CACCTGC	1 cut(s)	115
PciSI	GCTCTTC	2 cut(s)	34, 3604
PctI	GAATGC	2 cut(s)	991, 3237
PdmI	GAANNNNTTC	4 cut(s)	139, 2064, 2637, 3108
PflMI	CCANNNNNTGG	1 cut(s)	1873
PfoI	TCCNGGA	1 cut(s)	596
PkrI	GCNGC	3 cut(s)	1647, 1978, 2272
PleI	GAGTC	6 cut(s)	172, 1722, 2238, 2580, 3462, 3562
PpsI	GAGTC	6 cut(s)	172, 1722, 2238, 2580, 3462, 3562
Ppu21I	YACGTR	1 cut(s)	2480
PsiI	TTATAA	2 cut(s)	1167, 1188
Psp124BI	GAGCTC	1 cut(s)	3599
Psp6I	CCWGG	2 cut(s)	596, 2716
PspEI	GGTNACC	1 cut(s)	1995
PspFI	CCCAGC	1 cut(s)	2447
PspGI	CCWGG	2 cut(s)	596, 2716
PspN4I	GGNNCC	3 cut(s)	220, 1401, 3144
PspPI	GGNCC	2 cut(s)	805, 1575
PstI	CTGCAG	2 cut(s)	1004, 2875
PsuI	RGATCY	2 cut(s)	1399, 2020
PvuII	CAGCTG	2 cut(s)	2270, 3626
RsaI	GTAC	5 cut(s)	645, 1566, 2415, 2580, 3358
RsaNI	GTAC	5 cut(s)	644, 1565, 2414, 2579, 3357
SacI	GAGCTC	1 cut(s)	3599
SapI	GCTCTTC	2 cut(s)	34, 3604
SatI	GCNGC	3 cut(s)	1646, 1977, 2271
Sau96I	GGNCC	2 cut(s)	805, 1575
ScaI	AGTACT	1 cut(s)	2580
SchI	GAGTC	6 cut(s)	173, 1723, 2238, 2580, 3463, 3562
ScrFI	CCNGG	4 cut(s)	294, 598, 2718, 3243
SduI	GDGCHC	2 cut(s)	1735, 3599
SfcI	CTRYAG	3 cut(s)	894, 1000, 2871
SfuI	TTCGAA	2 cut(s)	2641, 3080
SinI	GGWCC	2 cut(s)	805, 1575
SmlI	CTYRAG	1 cut(s)	2944
SmoI	CTYRAG	1 cut(s)	2944
SnaBI	TACGTA	1 cut(s)	2480
SsiI	CCGC	6 cut(s)	1130, 1645, 2016, 2951, 3183, 3200
SspI	AATATT	2 cut(s)	268, 1826
SspMI	CTAG	8 cut(s)	99, 408, 825, 1323, 2297, 2582, 2702, 3645
SstI	GAGCTC	1 cut(s)	3599
StyD4I	CCNGG	4 cut(s)	292, 596, 2716, 3241
StyI	CCWWGG	3 cut(s)	129, 421, 2916
TaaI	ACNGT	6 cut(s)	1329, 1625, 2033, 2146, 3475, 3508
TaiI	ACGT	3 cut(s)	1905, 1927, 2482
TatI	WGTACW	3 cut(s)	2413, 2578, 3356
TauI	GCSGC	1 cut(s)	1648
TscAI	CASTG	2 cut(s)	1534, 3513
TseFI	GTSAC	2 cut(s)	206, 3121
TseI	GCWGC	2 cut(s)	1976, 2270
Tsp45I	GTSAC	2 cut(s)	206, 3121
TspGWI	ACGGA	4 cut(s)	1428, 1567, 2267, 2871
TspRI	CASTG	2 cut(s)	1534, 3513
Van91I	CCANNNNNTGG	1 cut(s)	1873
Vha464I	CTTAAG	1 cut(s)	2944
VpaK11BI	GGWCC	2 cut(s)	805, 1575
XapI	RAATTY	3 cut(s)	717, 3031, 3090
XceI	RCATGY	1 cut(s)	3396
XmiI	GTMKAC	1 cut(s)	1286
XmnI	GAANNNNTTC	4 cut(s)	139, 2064, 2637, 3108
XspI	CTAG	8 cut(s)	99, 408, 825, 1323, 2297, 2582, 2702, 3645
ZrmI	AGTACT	1 cut(s)	2580
Zsp2I	ATGCAT	1 cut(s)	1887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.