Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002362

Physical Location & Seq

Genomic Coordinates Reverse (-)

24909982 .. 24913752

Gene Structure 3771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G265200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3771 bp

ATGCTCCAAGTTTTATATGCTTTCTCACCTCACAAGCCCTATATCAAACAGGTTCGTTCTCTTTACTCTCTGTTCTCACTTTTCAACGCTAAATACAAGTTCTCAACCACCACTTGTCTCGCATACCCTTCATTCCCCTCGTTTTCAACGACCCCAAATAACAATACCCAGATAGATTTATCTTCTATTTGTTGCTCTGGTATTGCCCAATCTGTCATTTCTAGATGTTCCCACTTTTCTGAGAAGAATAAAGGCAAAGGCTTTGCTAACGCGTCTCTAAAAGACCTTCTTTTGGAGATTTCGGATGTAGTACCTGAATACACGCGTAGACTTAGGCGGGTTTCGGAGGTGAAACCTGAAGATGTGCTTGGATTATTACTCGGTTTTCAATTTCAGTGTGGGAAAGTTGGATTTAAAGCTAGCAAGGTTGAGTCTTTGTGGGAAATTTTCAAACGGGTTAATGGACAAAGTAAGGGTTTTAAGCATCTCTCTCAGTCATTCGAGGTCATGGCCTCGATGCTTGTCCGTGTGGGGTTGCTTAGAGAAGTTGAATTCTTGCTTTCCACAATGGAAAGCCAAGGAATTTTATTGGATAGTCATGAAGTTTTCAGTAATTTGATTAAAGGGTGTGTTGATGCTGGTGAATCAGAAATGGCCATTTCTATGTATGATCGAATGAGGCGCCGTTTACTCCCTTCATTATCGTGTTATGATGCTCTTCTTGATCATTTGGTTAAAATGAAGAAGACCCATTTGGCTTTTCGAGTTTGTTGGGATATGACAGAAATGGGTATTGATTTGAGAGGTGTGAAGAAGGCCACAATTGAGGATGTCATTGGACTCCTTTGCAAGGATGGAAGGCTTCTGGAAGCAAGAAATCTCGTCAAGAAGGCTATGGCTTTTGAACTCAAGCCTAGTAACTTAGTTCTATATGAAATTGCTTATGGTTATTGTGAGAAGAAGGACTTTGATGATTTGCTGAGTTTCTATGCTGAAATCAAGTGTGCACCTGATGTTCTGGCTGGGAATAGGATTATGCATTCTCAATGTAGCAATTTTGGAACAGGAAAGGCAGAACTGTTTTTGCGAGAATTGGAACATTTAGGCTTCAATCCTGATGAGATAACCTTTGGTATCATGATTGGCTGGAGTTGTCGTGAACGAAAACTAAAAAATGCTTTCATTTACCTGTCACAGATGTTGTCAAGACGACTAAAGCCCCATAACTGTACCTATAATGCTCTTATCAGTGCTGTCTTTATGGGGGATATGTGGAAGCATGCCCAGGAAATCTTTGATGAGATGGTGGATAGGGGGACAATACCTGATTTATTGACGTTCAGAGTTCTCTTAGCAGGCTATTGTAAAGCTAGACAATTTGATGAAGCAAAAAGGATAGTTTTTGACATGGCAAGCCGTGGATTAATTCAAAACTCTACCACAGAGGATTCACTATCCAAAGCATTTATAATTTTGGGTTTCAATCCATTATCTGTGAGGTTGAAGAGAGACAATGATTTGGGGTTTTCTTCAACTGAGTTTTATGATAATCTTGGGAATGGACTTTATTTGGATACAGACCTGGATGAGTATGAGAAGAGAGTCACTTGGATCCTAGAAGATTGCATGGTACCTGATTATAACTCACTTATGATGAAAGAATGCACTCTTGGAAATTTGAAGGGTGCATTGATGTTGGTCGATGAAATGGTTCGGTGGGGGCAAGACTTGTCATCTTCTACCTTCTCTGCCTTAATGAAAGGGTTCTCTGCATCCCCTTCACATATTAAGGGTATCACTGCAGTTGTGCATAAAAAGTCTCAATTAGTAGATCAGTTAGACCAAGAAACTTTAAATTTGCTAGTCCAAGCATACATGAAGAAAGGGTTGATATGTGATGGAAGGATAATATTGGATGGAATGTTCCGAAGGCATTTGAAAATCAAGAATGAGACATGCACTGCTGTAATTAAAGGTTTGTGCAAGAGAGGAAATTTGAAGGAGCTGCTTGCTTGTTGGAATAATGCTCAACAGAACAGATGGTTACCCGGGTCAGAAGATTGTAAAGCGTTAATGGAATGTCTTTGCAAGAAAGAGATGCTATGGGAAGCACTACAGCTTCTTGAAAGCATGCTGATATCCTTGCCTCACCTACGGTTAGATATATGCCATATGTTCCTTGAAAAGCTTTCTGTTACAGGCTTTACAAGAATTGGGCACATATTGTTGGAAGAACTTGAACAGCGCGGTGGCATCCTGGATCATGTGGCTTATAGCTATCTTATAAGAGGATTGTGTAAGGAGAAAACTTTTCCTTTAGCATTTGCGATACTAGAAAATATGCTGGCTAGAAATTTGGCACCATGGTTGGACGATTCTGTCCTATTAATTTCTCGTTTGTGTAGGGCTGGTAGATATGAAAAGGCCATTTATTTGAAAGAGATTGGTCTAAGAGAAAAGCCTTTGTCTTCACTTTCCATTGATCGTGCATTAATTGAAGGCTGTTGTATGGCAGGGAAGGTTGGAGAGGCAACCACTATATTACGGAATATGTTGTTAAAGGGGATACTTCCTGATACTGAAACTTACAATATTTTGGTTCAGGGTCATTGCAAGGTTAACAACTTAAAGAAAGTGAGGGAGCTACTTGGTGTCATGATAAGGAAACACTTCAGCATTTCACTTGCAACTTTCCGCAATTTGGTGTGTTTGATGTGTGTGGAAGGTAAGGTTCTTTATGCAGTGAATCTGAAGGAGCTCATGCATGGACAAAGTGAGCCTCGCGATCTCACCATTTACAATATTCTGATTTTCTATCTTTTCCAAACTGGGAATACTTTGATTGTGAATAACGTGTTAGATCATTTGCAAGAGAAGAAATTGCTACTGAATGAAGTAACGTATAATTTTCTAGTATATGGGTTTTCTCGGTGTAAAGATGTGTCCAGTGCTGTGGAAATTCTGTCTACTATGATCTCTAAGGAATTTAGGCCAAGCAACCGCAACTTGAGAATAGTTATGACCAGCCTGTGTGGGATTGGGGAGCTCGAGAAAGCCTTGGAGTTGAGTCGAGAAATGGAATCAAGAGGCTGGGTTCATGATTCAATCATTCAAAATGCCATTGTTGAGGACCTTCTTTCTCATGGTAAGCTTCAAGAAGCAGAAAAGTTTCTGGACAGGATGGTAGAGAAATGCCTAATTCCTGAGAATATCAACTATGATAATCTAATTAAACGTTTTTGCTCGTGTGGACGACTGAGCAAGGCAGTTGATCTTCTAAACATAATGTTGAAGAAAGGAAATCTTCCAGACGCTACTAGTTATGACTCTGTCACCAGCTCTTGCTGTGCAGTTAATCAACTGGACCAAGCTATGGATTTTCATACTGAGATGCTGGATAGAAATCTCAAGCCAAGCATCAACACATGGGAACTTCTTGTCCACAATCTATGCCAAGATGGACAAACTGCAGAAGCAGAAAGGCTTTTGCTTTCAATGGTTTGCATAGGTGAAACAGTGAGCAGGGAGATATATTCTTCTGTAATTAATAGGTATCGCTTAGAAAAGAATCTCAGGAAGACATCAGAGCTCATGCAAGCAATGCAACAGAGTGGTTTTGAGCCAGACTTTGAGACACACTGGTCTCTCATAAGCAATCTAAGCAATTCTAGTGACAAGGACAATGCAAACAGCAGCCGGGGTTTCCTGGCAAGGCTTCTTTCTTCAAGTGGATTTTCTCGGCAAAAGGATTCGAAGACAAAACTGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048037 GO:0051536 GO:0051540 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

1257

Amino Acids

142.6

Weight (kDa)

8.24

Isoelectric Point (pI)

41.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15280
fragaria_vesca	FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880
malus_domestica	MD09G1053400.v1.1
prunus_persica	Prupe.3G265200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581
rosa_laevigata	RLG00000021724 RLG00000021736
rosa_multiflora	Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002
rosa_roxburghii	Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440
rosa_rugosa	Rorug02G0530600
rosa_samantha	Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700
rosa_wichuraiana	Rw2G049750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1469, 1641, 2285
AasI	GACNNNNNNGTC	2 cut(s)	2378, 3640
Acc65I	GGTACC	1 cut(s)	1630
AccB1I	GGYRCC	3 cut(s)	681, 1630, 2359
AccB7I	CCANNNNNTGG	1 cut(s)	3373
AccI	GTMKAC	2 cut(s)	328, 2966
AccII	CGCG	4 cut(s)	272, 325, 2247, 2784
AciI	CCGC	4 cut(s)	337, 2247, 2695, 3001
AclI	AACGTT	1 cut(s)	3235
AclWI	GGATC	3 cut(s)	1606, 1619, 2268
AcoI	YGGCCR	1 cut(s)	654
AcsI	RAATTY	9 cut(s)	444, 551, 582, 1675, 1855, 1993, 2353, 2958, 2984
AcuI	CTGAAG	3 cut(s)	378, 2656, 2771
AcyI	GRCGYC	1 cut(s)	682
AfaI	GTAC	3 cut(s)	312, 1231, 1632
AfiI	CCNNNNNNNGG	4 cut(s)	292, 850, 2701, 3373
AflIII	ACRYGT	3 cut(s)	270, 323, 2853
AhlI	ACTAGT	1 cut(s)	3317
AjnI	CCWGG	4 cut(s)	1284, 1581, 2256, 3705
AjuI	GAANNNNNNNTTGG	6 cut(s)	351, 383, 737, 769, 1653, 1685
AloI	GAACNNNNNNTCC	4 cut(s)	1907, 1939, 3423, 3455
Alw21I	GWGCWC	4 cut(s)	1009, 2760, 3048, 3591
Alw26I	GTCTC	7 cut(s)	122, 279, 1503, 1824, 1946, 3626, 3648
Alw44I	GTGCAC	1 cut(s)	1005
AlwI	GGATC	3 cut(s)	1606, 1619, 2268
Ama87I	CYCGRG	2 cut(s)	2048, 3047
AoxI	GGCC	5 cut(s)	510, 654, 816, 2424, 2990
ApaLI	GTGCAC	1 cut(s)	1005
ApeKI	GCWGC	2 cut(s)	2005, 3693
ApoI	RAATTY	9 cut(s)	444, 551, 582, 1675, 1855, 1993, 2353, 2958, 2984
AseI	ATTAAT	4 cut(s)	1424, 2387, 2492, 3546
Asp700I	GAANNNNTTC	4 cut(s)	1710, 1763, 2669, 3168
Asp718I	GGTACC	1 cut(s)	1630
AspLEI	GCGC	2 cut(s)	684, 2247
AspS9I	GGNCC	2 cut(s)	3130, 3364
AsuC2I	CCSGG	3 cut(s)	2049, 2050, 3698
AsuHPI	GGTGA	7 cut(s)	18, 361, 653, 2141, 2782, 3325, 3521
AsuII	TTCGAA	1 cut(s)	3752
AsuNHI	GCTAGC	1 cut(s)	419
AvaI	CYCGRG	2 cut(s)	2048, 3047
AvaII	GGWCC	2 cut(s)	3130, 3364
BaeGI	GKGCMC	2 cut(s)	1009, 2220
BalI	TGGCCA	1 cut(s)	656
BamHI	GGATCC	1 cut(s)	1611
BanI	GGYRCC	3 cut(s)	681, 1630, 2359
BanII	GRGCYC	3 cut(s)	2760, 3048, 3591
BauI	CACGAG	1 cut(s)	3244
BbsI	GAAGAC	4 cut(s)	752, 2460, 3584, 3761
Bbv12I	GWGCWC	4 cut(s)	1009, 2760, 3048, 3591
BbvI	GCAGC	2 cut(s)	1992, 3705
BccI	CCATC	7 cut(s)	848, 1297, 1892, 1910, 2034, 3175, 3452
BceAI	ACGGC	2 cut(s)	669, 1401
BciT130I	CCWGG	4 cut(s)	1286, 1583, 2258, 3707
BciVI	GTATCC	2 cut(s)	1567, 2559
BclI	TGATCA	1 cut(s)	724
BcnI	CCSGG	3 cut(s)	2049, 2050, 3698
BcoDI	GTCTC	7 cut(s)	122, 279, 1503, 1824, 1946, 3626, 3648
BcuI	ACTAGT	1 cut(s)	3317
BfmI	CTRYAG	3 cut(s)	1800, 2114, 3468
BfoI	RGCGCY	1 cut(s)	685
BfuI	GTATCC	2 cut(s)	1567, 2559
BisI	GCNGC	2 cut(s)	2006, 3694
BlsI	GCNGC	2 cut(s)	2007, 3695
Bme1390I	CCNGG	7 cut(s)	1286, 1583, 2049, 2050, 2258, 3698, 3707
Bme18I	GGWCC	2 cut(s)	3130, 3364
BmeT110I	CYCGRG	2 cut(s)	2048, 3047
BmgT120I	GGNCC	2 cut(s)	3130, 3364
BmiI	GGNNCC	4 cut(s)	683, 1613, 1632, 2361
BmrFI	CCNGG	7 cut(s)	1286, 1583, 2049, 2050, 2258, 3698, 3707
BmrI	ACTGGG	1 cut(s)	2838
BmsI	GCATC	9 cut(s)	493, 507, 625, 703, 1781, 2088, 2262, 3381, 3426
BmtI	GCTAGC	1 cut(s)	423
BmuI	ACTGGG	1 cut(s)	2838
BpiI	GAAGAC	4 cut(s)	752, 2460, 3584, 3761
BpmI	CTGGAG	1 cut(s)	1168
Bpu14I	TTCGAA	1 cut(s)	3752
BpuEI	CTTGAG	3 cut(s)	893, 3028, 3392
BpuMI	CCSGG	3 cut(s)	2049, 2050, 3698
BsaBI	GATNNNNATC	1 cut(s)	3402
BsaHI	GRCGYC	1 cut(s)	682
BsaI	GGTCTC	1 cut(s)	3648
BsaJI	CCNNGG	7 cut(s)	577, 1284, 1417, 2048, 2363, 3057, 3697
BsaXI	ACNNNNNCTCC	2 cut(s)	1141, 1171
Bsc4I	CCNNNNNNNGG	4 cut(s)	292, 850, 2701, 3373
Bse1I	ACTGG	5 cut(s)	2833, 2946, 3366, 3644, 3768
Bse3DI	GCAATG	2 cut(s)	2608, 3606
Bse8I	GATNNNNATC	1 cut(s)	3402
BseBI	CCWGG	4 cut(s)	1286, 1583, 2258, 3707
BseDI	CCNNGG	7 cut(s)	577, 1284, 1417, 2048, 2363, 3057, 3697
BseGI	GGATG	8 cut(s)	310, 835, 859, 1591, 1772, 1921, 2253, 3186
BseJI	GATNNNNATC	1 cut(s)	3402
BseLI	CCNNNNNNNGG	4 cut(s)	292, 850, 2701, 3373
BseMI	GCAATG	2 cut(s)	2608, 3606
BseMII	CTCAG	8 cut(s)	231, 506, 971, 1527, 3195, 3248, 3378, 3586
BseNI	ACTGG	5 cut(s)	2833, 2946, 3366, 3644, 3768
BseSI	GKGCMC	2 cut(s)	1009, 2220
BseXI	GCAGC	2 cut(s)	1992, 3705
BseYI	CCCAGC	2 cut(s)	1022, 3090
BsgI	GTGCAG	1 cut(s)	3369
Bsh1236I	CGCG	4 cut(s)	272, 325, 2247, 2784
BshFI	GGCC	5 cut(s)	512, 656, 818, 2426, 2992
BshNI	GGYRCC	3 cut(s)	681, 1630, 2359
BsiHKAI	GWGCWC	4 cut(s)	1009, 2760, 3048, 3591
BsiHKCI	CYCGRG	2 cut(s)	2048, 3047
BsiSI	CCGG	2 cut(s)	2049, 3697
BslFI	GGGAC	1 cut(s)	1330
BslI	CCNNNNNNNGG	4 cut(s)	292, 850, 2701, 3373
BsmAI	GTCTC	7 cut(s)	122, 279, 1503, 1824, 1946, 3626, 3648
BsmBI	CGTCTC	1 cut(s)	279
BsmFI	GGGAC	1 cut(s)	1330
BsmI	GAATGC	2 cut(s)	1039, 1667
BsnI	GGCC	5 cut(s)	512, 656, 818, 2426, 2992
Bso31I	GGTCTC	1 cut(s)	3648
BsoBI	CYCGRG	2 cut(s)	2048, 3047
Bsp119I	TTCGAA	1 cut(s)	3752
Bsp1286I	GDGCHC	5 cut(s)	1009, 2220, 2760, 3048, 3591
Bsp19I	CCATGG	1 cut(s)	2363
Bsp68I	TCGCGA	1 cut(s)	2784
BspACI	CCGC	4 cut(s)	337, 2247, 2695, 3001
BspANI	GGCC	5 cut(s)	512, 656, 818, 2426, 2992
BspCNI	CTCAG	8 cut(s)	232, 505, 972, 1528, 3196, 3249, 3379, 3585
BspFNI	CGCG	4 cut(s)	272, 325, 2247, 2784
BspHI	TCATGA	4 cut(s)	598, 1137, 2655, 3097
BspLI	GGNNCC	4 cut(s)	683, 1613, 1632, 2361
BspMAI	CTGCAG	2 cut(s)	1804, 3472
BspOI	GCTAGC	1 cut(s)	423
BspPI	GGATC	3 cut(s)	1606, 1619, 2268
BspQI	GCTCTTC	1 cut(s)	723
BspT104I	TTCGAA	1 cut(s)	3752
BspT107I	GGYRCC	3 cut(s)	681, 1630, 2359
BspTNI	GGTCTC	1 cut(s)	3648
BsrDI	GCAATG	2 cut(s)	2608, 3606
BsrI	ACTGG	5 cut(s)	2833, 2946, 3366, 3644, 3768
BssECI	CCNNGG	7 cut(s)	577, 1284, 1417, 2048, 2363, 3057, 3697
BssNI	GRCGYC	1 cut(s)	682
BssSI	CACGAG	1 cut(s)	3244
BssT1I	CCWWGG	3 cut(s)	577, 2363, 3057
Bst2BI	CACGAG	1 cut(s)	3244
Bst2UI	CCWGG	4 cut(s)	1286, 1583, 2258, 3707
Bst4CI	ACNGT	4 cut(s)	1080, 1229, 2157, 3517
Bst6I	CTCTTC	3 cut(s)	723, 1499, 1592
BstACI	GRCGYC	1 cut(s)	682
BstAPI	GCANNNNNTGC	1 cut(s)	3601
BstBI	TTCGAA	1 cut(s)	3752
BstC8I	GCNNGC	8 cut(s)	421, 1281, 1357, 1414, 2010, 2132, 2346, 3597
BstDSI	CCRYGG	2 cut(s)	1417, 2363
BstEII	GGTNACC	1 cut(s)	2043
BstENI	CCTNNNNNAGG	1 cut(s)	848
BstF5I	GGATG	8 cut(s)	310, 835, 859, 1591, 1772, 1921, 2253, 3186
BstFNI	CGCG	4 cut(s)	272, 325, 2247, 2784
BstH2I	RGCGCY	1 cut(s)	685
BstHHI	GCGC	2 cut(s)	684, 2247
BstMAI	GTCTC	7 cut(s)	122, 279, 1503, 1824, 1946, 3626, 3648
BstMWI	GCNNNNNNNGC	2 cut(s)	3601, 3660
BstNI	CCWGG	4 cut(s)	1286, 1583, 2258, 3707
BstNSI	RCATGY	3 cut(s)	1283, 1959, 2134
BstPI	GGTNACC	1 cut(s)	2043
BstSCI	CCNGG	7 cut(s)	1284, 1581, 2047, 2048, 2256, 3696, 3705
BstSFI	CTRYAG	3 cut(s)	1800, 2114, 3468
BstSLI	GKGCMC	2 cut(s)	1009, 2220
BstUI	CGCG	4 cut(s)	272, 325, 2247, 2784
BstV1I	GCAGC	2 cut(s)	1992, 3705
BstV2I	GAAGAC	4 cut(s)	752, 2460, 3584, 3761
BstX2I	RGATCY	1 cut(s)	1611
BstXI	CCANNNNNNTGG	1 cut(s)	2953
BstYI	RGATCY	1 cut(s)	1611
BsuI	GTATCC	2 cut(s)	1567, 2559
BsuRI	GGCC	5 cut(s)	512, 656, 818, 2426, 2992
BtgI	CCRYGG	2 cut(s)	1417, 2363
BtsCI	GGATG	8 cut(s)	310, 835, 859, 1591, 1772, 1921, 2253, 3186
BtsI	GCAGTG	3 cut(s)	1797, 1959, 2748
BtsIMutI	CAGTG	8 cut(s)	401, 1255, 1797, 1959, 2748, 2953, 3522, 3637
BtuMI	TCGCGA	1 cut(s)	2784
Cac8I	GCNNGC	8 cut(s)	421, 1281, 1357, 1414, 2010, 2132, 2346, 3597
CciI	TCATGA	4 cut(s)	598, 1137, 2655, 3097
CfoI	GCGC	2 cut(s)	684, 2247
Cfr13I	GGNCC	2 cut(s)	3130, 3364
Cfr9I	CCCGGG	1 cut(s)	2048
CseI	GACGC	2 cut(s)	261, 3320
Csp6I	GTAC	3 cut(s)	311, 1230, 1631
CviQI	GTAC	3 cut(s)	311, 1230, 1631
DinI	GGCGCC	1 cut(s)	683
DraI	TTTAAA	2 cut(s)	415, 1854
DrdI	GACNNNNNNGTC	2 cut(s)	2378, 3640
DseDI	GACNNNNNNGTC	2 cut(s)	2378, 3640
EaeI	YGGCCR	1 cut(s)	654
Eam1104I	CTCTTC	3 cut(s)	723, 1499, 1592
EarI	CTCTTC	3 cut(s)	723, 1499, 1592
Ecl136II	GAGCTC	3 cut(s)	2758, 3046, 3589
Eco130I	CCWWGG	3 cut(s)	577, 2363, 3057
Eco24I	GRGCYC	3 cut(s)	2760, 3048, 3591
Eco31I	GGTCTC	1 cut(s)	3648
Eco32I	GATATC	1 cut(s)	2139
Eco47I	GGWCC	2 cut(s)	3130, 3364
Eco53kI	GAGCTC	3 cut(s)	2758, 3046, 3589
Eco57I	CTGAAG	3 cut(s)	378, 2656, 2771
Eco88I	CYCGRG	2 cut(s)	2048, 3047
Eco91I	GGTNACC	1 cut(s)	2043
EcoICRI	GAGCTC	3 cut(s)	2758, 3046, 3589
EcoNI	CCTNNNNNAGG	1 cut(s)	848
EcoO109I	RGGNCCY	1 cut(s)	3130
EcoO65I	GGTNACC	1 cut(s)	2043
EcoRI	GAATTC	1 cut(s)	551
EcoRII	CCWGG	4 cut(s)	1284, 1581, 2256, 3705
EcoRV	GATATC	1 cut(s)	2139
EcoT14I	CCWWGG	3 cut(s)	577, 2363, 3057
EcoT22I	ATGCAT	2 cut(s)	1041, 2766
EcoT38I	GRGCYC	3 cut(s)	2760, 3048, 3591
EgeI	GGCGCC	1 cut(s)	683
EheI	GGCGCC	1 cut(s)	683
ErhI	CCWWGG	3 cut(s)	577, 2363, 3057
Esp3I	CGTCTC	1 cut(s)	279
FalI	AAGNNNNNCTT	8 cut(s)	273, 305, 351, 383, 950, 982, 3288, 3320
FaqI	GGGAC	1 cut(s)	1330
FauI	CCCGC	1 cut(s)	330
FauNDI	CATATG	1 cut(s)	2172
FbaI	TGATCA	1 cut(s)	724
FblI	GTMKAC	2 cut(s)	328, 2966
Fnu4HI	GCNGC	2 cut(s)	2006, 3694
FokI	GGATG	8 cut(s)	317, 842, 866, 1598, 1759, 1928, 2240, 3193
FriOI	GRGCYC	3 cut(s)	2760, 3048, 3591
Fsp4HI	GCNGC	2 cut(s)	2006, 3694
GlaI	GCGC	2 cut(s)	683, 2246
GluI	GCNGC	2 cut(s)	2006, 3694
GsaI	CCCAGC	2 cut(s)	1026, 3094
GsuI	CTGGAG	1 cut(s)	1168
HaeII	RGCGCY	1 cut(s)	685
HaeIII	GGCC	5 cut(s)	512, 656, 818, 2426, 2992
HapII	CCGG	2 cut(s)	2049, 3697
HgaI	GACGC	2 cut(s)	261, 3320
HhaI	GCGC	2 cut(s)	684, 2247
Hin1I	GRCGYC	1 cut(s)	682
Hin6I	GCGC	2 cut(s)	682, 2245
HinP1I	GCGC	2 cut(s)	682, 2245
HincII	GTYRAC	1 cut(s)	2620
HindII	GTYRAC	1 cut(s)	2620
HindIII	AAGCTT	2 cut(s)	2186, 3149
HpaI	GTTAAC	1 cut(s)	2620
HpaII	CCGG	2 cut(s)	2049, 3697
HphI	GGTGA	7 cut(s)	18, 361, 653, 2141, 2782, 3325, 3521
Hpy166II	GTNNAC	8 cut(s)	329, 689, 1007, 1160, 2620, 2967, 3251, 3442
Hpy8I	GTNNAC	8 cut(s)	329, 689, 1007, 1160, 2620, 2967, 3251, 3442
HpyCH4III	ACNGT	4 cut(s)	1080, 1229, 2157, 3517
HpyCH4IV	ACGT	4 cut(s)	1337, 2853, 2900, 3235
HpyF10VI	GCNNNNNNNGC	2 cut(s)	3601, 3660
HpySE526I	ACGT	4 cut(s)	1337, 2853, 2900, 3235
Hsp92I	GRCGYC	1 cut(s)	682
HspAI	GCGC	2 cut(s)	682, 2245
KasI	GGCGCC	1 cut(s)	681
KpnI	GGTACC	1 cut(s)	1634
Ksp22I	TGATCA	1 cut(s)	724
KspAI	GTTAAC	1 cut(s)	2620
LguI	GCTCTTC	1 cut(s)	723
LmnI	GCTCC	5 cut(s)	9, 2002, 2641, 2755, 3043
Lsp1109I	GCAGC	2 cut(s)	1992, 3705
LweI	GCATC	9 cut(s)	493, 507, 625, 703, 1781, 2088, 2262, 3381, 3426
MaeII	ACGT	4 cut(s)	1337, 2853, 2900, 3235
MaeIII	GTNAC	8 cut(s)	917, 1191, 1603, 2043, 2194, 2896, 3331, 3671
MfeI	CAATTG	1 cut(s)	822
MflI	RGATCY	1 cut(s)	1611
MhlI	GDGCHC	5 cut(s)	1009, 2220, 2760, 3048, 3591
MlsI	TGGCCA	1 cut(s)	656
MluI	ACGCGT	2 cut(s)	270, 323
MluNI	TGGCCA	1 cut(s)	656
Mly113I	GGCGCC	1 cut(s)	682
MlyI	GAGTC	5 cut(s)	440, 834, 1611, 3076, 3320
MmeI	TCCRAC	5 cut(s)	388, 1997, 2208, 2349, 2503
Mox20I	TGGCCA	1 cut(s)	656
Mph1103I	ATGCAT	2 cut(s)	1041, 2766
MroXI	GAANNNNTTC	4 cut(s)	1710, 1763, 2669, 3168
MscI	TGGCCA	1 cut(s)	656
MslI	CAYNNNNRTG	2 cut(s)	662, 703
Msp20I	TGGCCA	1 cut(s)	656
MspI	CCGG	2 cut(s)	2049, 3697
MspR9I	CCNGG	7 cut(s)	1286, 1583, 2049, 2050, 2258, 3698, 3707
MunI	CAATTG	1 cut(s)	822
Mva1269I	GAATGC	2 cut(s)	1039, 1667
MvaI	CCWGG	4 cut(s)	1286, 1583, 2258, 3707
MvnI	CGCG	4 cut(s)	272, 325, 2247, 2784
MwoI	GCNNNNNNNGC	2 cut(s)	3601, 3660
NarI	GGCGCC	1 cut(s)	682
NciI	CCSGG	3 cut(s)	2049, 2050, 3698
NcoI	CCATGG	1 cut(s)	2363
NdeI	CATATG	1 cut(s)	2172
NheI	GCTAGC	1 cut(s)	419
NlaIV	GGNNCC	4 cut(s)	683, 1613, 1632, 2361
NmeAIII	GCCGAG	1 cut(s)	3718
NmuCI	GTSAC	4 cut(s)	1191, 1603, 3331, 3671
NruI	TCGCGA	1 cut(s)	2784
NsiI	ATGCAT	2 cut(s)	1041, 2766
NspI	RCATGY	3 cut(s)	1283, 1959, 2134
NspV	TTCGAA	1 cut(s)	3752
PaeI	GCATGC	2 cut(s)	1283, 2134
PaeR7I	CTCGAG	1 cut(s)	3047
PagI	TCATGA	4 cut(s)	598, 1137, 2655, 3097
PciSI	GCTCTTC	1 cut(s)	723
PcsI	WCGNNNNNNNCGW	1 cut(s)	146
PctI	GAATGC	2 cut(s)	1039, 1667
PdmI	GAANNNNTTC	4 cut(s)	1710, 1763, 2669, 3168
PfeI	GAWTC	8 cut(s)	644, 1448, 2375, 2746, 3080, 3101, 3568, 3749
PflFI	GACNNNGTC	1 cut(s)	3329
PflMI	CCANNNNNTGG	1 cut(s)	3373
PfoI	TCCNGGA	1 cut(s)	2256
PkrI	GCNGC	2 cut(s)	2007, 3695
PleI	GAGTC	5 cut(s)	439, 834, 1610, 3075, 3320
PluTI	GGCGCC	1 cut(s)	685
PpsI	GAGTC	5 cut(s)	439, 834, 1610, 3075, 3320
PpuMI	RGGWCCY	1 cut(s)	3130
PshBI	ATTAAT	4 cut(s)	1424, 2387, 2492, 3546
PsiI	TTATAA	3 cut(s)	1469, 1641, 2285
Psp124BI	GAGCTC	3 cut(s)	2760, 3048, 3591
Psp1406I	AACGTT	1 cut(s)	3235
Psp5II	RGGWCCY	1 cut(s)	3130
Psp6I	CCWGG	4 cut(s)	1284, 1581, 2256, 3705
PspEI	GGTNACC	1 cut(s)	2043
PspFI	CCCAGC	2 cut(s)	1022, 3090
PspGI	CCWGG	4 cut(s)	1284, 1581, 2256, 3705
PspN4I	GGNNCC	4 cut(s)	683, 1613, 1632, 2361
PspPI	GGNCC	2 cut(s)	3130, 3364
PspPPI	RGGWCCY	1 cut(s)	3130
PstI	CTGCAG	2 cut(s)	1804, 3472
PsuI	RGATCY	1 cut(s)	1611
PsyI	GACNNNGTC	1 cut(s)	3329
RruI	TCGCGA	1 cut(s)	2784
RsaI	GTAC	3 cut(s)	312, 1231, 1632
RsaNI	GTAC	3 cut(s)	311, 1230, 1631
RseI	CAYNNNNRTG	2 cut(s)	662, 703
SacI	GAGCTC	3 cut(s)	2760, 3048, 3591
SapI	GCTCTTC	1 cut(s)	723
SatI	GCNGC	2 cut(s)	2006, 3694
Sau96I	GGNCC	2 cut(s)	3130, 3364
SchI	GAGTC	5 cut(s)	440, 834, 1611, 3076, 3320
ScrFI	CCNGG	7 cut(s)	1286, 1583, 2049, 2050, 2258, 3698, 3707
SduI	GDGCHC	5 cut(s)	1009, 2220, 2760, 3048, 3591
SfaNI	GCATC	9 cut(s)	493, 507, 625, 703, 1781, 2088, 2262, 3381, 3426
SfcI	CTRYAG	3 cut(s)	1800, 2114, 3468
SfoI	GGCGCC	1 cut(s)	683
Sfr274I	CTCGAG	1 cut(s)	3047
SfuI	TTCGAA	1 cut(s)	3752
SinI	GGWCC	2 cut(s)	3130, 3364
SlaI	CTCGAG	1 cut(s)	3047
SmaI	CCCGGG	1 cut(s)	2050
SmiMI	CAYNNNNRTG	2 cut(s)	662, 703
SmlI	CTYRAG	4 cut(s)	908, 3007, 3047, 3407
SmoI	CTYRAG	4 cut(s)	908, 3007, 3047, 3407
SpeI	ACTAGT	1 cut(s)	3317
SphI	GCATGC	2 cut(s)	1283, 2134
SsiI	CCGC	4 cut(s)	337, 2247, 2695, 3001
SspDI	GGCGCC	1 cut(s)	681
SspI	AATATT	3 cut(s)	1911, 2593, 2803
SstI	GAGCTC	3 cut(s)	2760, 3048, 3591
StyD4I	CCNGG	7 cut(s)	1284, 1581, 2047, 2048, 2256, 3696, 3705
StyI	CCWWGG	3 cut(s)	577, 2363, 3057
TaaI	ACNGT	4 cut(s)	1080, 1229, 2157, 3517
TaiI	ACGT	4 cut(s)	1340, 2856, 2903, 3238
TaqI	TCGA	8 cut(s)	501, 515, 673, 763, 1701, 3048, 3070, 3752
TfiI	GAWTC	8 cut(s)	644, 1448, 2375, 2746, 3080, 3101, 3568, 3749
TscAI	CASTG	8 cut(s)	401, 1255, 1804, 1966, 2748, 2953, 3522, 3644
TseFI	GTSAC	4 cut(s)	1191, 1603, 3331, 3671
TseI	GCWGC	2 cut(s)	2005, 3693
Tsp45I	GTSAC	4 cut(s)	1191, 1603, 3331, 3671
TspGWI	ACGGA	2 cut(s)	515, 2560
TspMI	CCCGGG	1 cut(s)	2048
TspRI	CASTG	8 cut(s)	401, 1255, 1804, 1966, 2748, 2953, 3522, 3644
Tth111I	GACNNNGTC	1 cut(s)	3329
Van91I	CCANNNNNTGG	1 cut(s)	3373
VneI	GTGCAC	1 cut(s)	1005
VpaK11BI	GGWCC	2 cut(s)	3130, 3364
VspI	ATTAAT	4 cut(s)	1424, 2387, 2492, 3546
XagI	CCTNNNNNAGG	1 cut(s)	848
XapI	RAATTY	9 cut(s)	444, 551, 582, 1675, 1855, 1993, 2353, 2958, 2984
XbaI	TCTAGA	1 cut(s)	221
XceI	RCATGY	3 cut(s)	1283, 1959, 2134
XhoI	CTCGAG	1 cut(s)	3047
XmaI	CCCGGG	1 cut(s)	2048
XmiI	GTMKAC	2 cut(s)	328, 2966
XmnI	GAANNNNTTC	4 cut(s)	1710, 1763, 2669, 3168
Zsp2I	ATGCAT	2 cut(s)	1041, 2766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.