Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15280 |
| fragaria_vesca | FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880 |
| malus_domestica | MD09G1053400.v1.1 |
| prunus_persica | Prupe.3G265200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581 |
| rosa_laevigata | RLG00000021724 RLG00000021736 |
| rosa_multiflora | Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440 |
| rosa_rugosa | Rorug02G0530600 |
| rosa_samantha | Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700 |
| rosa_wichuraiana | Rw2G049750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 94, 315 |
| AcuI | CTGAAG | 1 cut(s) | 146 |
| AgsI | TTSAA | 2 cut(s) | 121, 328 |
| AluBI | AGCT | 1 cut(s) | 201 |
| AluI | AGCT | 1 cut(s) | 201 |
| AoxI | GGCC | 1 cut(s) | 30 |
| ApoI | RAATTY | 2 cut(s) | 94, 315 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 45, 77 |
| BaeGI | GKGCMC | 1 cut(s) | 226 |
| BccI | CCATC | 1 cut(s) | 65 |
| BseGI | GGATG | 1 cut(s) | 76 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseSI | GKGCMC | 1 cut(s) | 226 |
| BseYI | CCCAGC | 1 cut(s) | 239 |
| BshFI | GGCC | 1 cut(s) | 32 |
| BslFI | GGGAC | 1 cut(s) | 292 |
| BsmFI | GGGAC | 1 cut(s) | 292 |
| BsmI | GAATGC | 1 cut(s) | 256 |
| BsnI | GGCC | 1 cut(s) | 32 |
| Bsp1286I | GDGCHC | 1 cut(s) | 226 |
| BspANI | GGCC | 1 cut(s) | 32 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspHI | TCATGA | 1 cut(s) | 102 |
| BspQI | GCTCTTC | 1 cut(s) | 280 |
| Bst6I | CTCTTC | 1 cut(s) | 280 |
| BstDEI | CTNAG | 2 cut(s) | 139, 210 |
| BstF5I | GGATG | 1 cut(s) | 76 |
| BstSLI | GKGCMC | 1 cut(s) | 226 |
| BsuRI | GGCC | 1 cut(s) | 32 |
| BtsCI | GGATG | 1 cut(s) | 76 |
| CciI | TCATGA | 1 cut(s) | 102 |
| CviAII | CATG | 1 cut(s) | 103 |
| CviJI | RGCY | 8 cut(s) | 32, 110, 116, 130, 201, 239, 270, 324 |
| CviKI_1 | RGCY | 8 cut(s) | 32, 110, 116, 130, 201, 239, 270, 324 |
| DdeI | CTNAG | 2 cut(s) | 139, 210 |
| DraI | TTTAAA | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 1 cut(s) | 280 |
| EarI | CTCTTC | 1 cut(s) | 280 |
| Eco57I | CTGAAG | 1 cut(s) | 146 |
| EcoT22I | ATGCAT | 1 cut(s) | 258 |
| FaeI | CATG | 1 cut(s) | 106 |
| FaiI | YATR | 6 cut(s) | 104, 113, 162, 207, 236, 254 |
| FaqI | GGGAC | 1 cut(s) | 292 |
| FatI | CATG | 1 cut(s) | 102 |
| FokI | GGATG | 1 cut(s) | 83 |
| GsaI | CCCAGC | 1 cut(s) | 243 |
| HaeIII | GGCC | 1 cut(s) | 32 |
| Hin1II | CATG | 1 cut(s) | 106 |
| HinfI | GANTC | 2 cut(s) | 79, 182 |
| Hpy188I | TCNGA | 1 cut(s) | 187 |
| Hpy188III | TCNNGA | 3 cut(s) | 83, 103, 332 |
| HpyAV | CCTTC | 3 cut(s) | 22, 100, 172 |
| HpyCH4V | TGCA | 3 cut(s) | 66, 256, 304 |
| HpyF3I | CTNAG | 2 cut(s) | 139, 210 |
| Hsp92II | CATG | 1 cut(s) | 106 |
| LguI | GCTCTTC | 1 cut(s) | 280 |
| LpnPI | CCDG | 5 cut(s) | 52, 68, 225, 240, 345 |
| MboII | GAAGA | 3 cut(s) | 37, 187, 297 |
| MhlI | GDGCHC | 1 cut(s) | 226 |
| MluCI | AATT | 4 cut(s) | 60, 94, 308, 315 |
| MlyI | GAGTC | 1 cut(s) | 176 |
| MnlI | CCTC | 2 cut(s) | 34, 79 |
| Mph1103I | ATGCAT | 1 cut(s) | 258 |
| MseI | TTAA | 2 cut(s) | 146, 216 |
| Mva1269I | GAATGC | 1 cut(s) | 256 |
| NlaIII | CATG | 1 cut(s) | 106 |
| NsiI | ATGCAT | 1 cut(s) | 258 |
| PagI | TCATGA | 1 cut(s) | 102 |
| PciSI | GCTCTTC | 1 cut(s) | 280 |
| PctI | GAATGC | 1 cut(s) | 256 |
| PfeI | GAWTC | 1 cut(s) | 79 |
| PleI | GAGTC | 1 cut(s) | 176 |
| PpsI | GAGTC | 1 cut(s) | 176 |
| PspFI | CCCAGC | 1 cut(s) | 239 |
| SapI | GCTCTTC | 1 cut(s) | 280 |
| SaqAI | TTAA | 2 cut(s) | 146, 216 |
| SchI | GAGTC | 1 cut(s) | 176 |
| SduI | GDGCHC | 1 cut(s) | 226 |
| SetI | ASST | 3 cut(s) | 203, 298, 359 |
| SgeI | CNNG | 9 cut(s) | 79, 95, 102, 115, 239, 252, 294, 317, 344 |
| Sse9I | AATT | 4 cut(s) | 60, 94, 308, 315 |
| TasI | AATT | 4 cut(s) | 60, 94, 308, 315 |
| TfiI | GAWTC | 1 cut(s) | 79 |
| Tru1I | TTAA | 2 cut(s) | 146, 216 |
| Tru9I | TTAA | 2 cut(s) | 146, 216 |
| TspDTI | ATGAA | 3 cut(s) | 91, 119, 165 |
| XapI | RAATTY | 2 cut(s) | 94, 315 |
| Zsp2I | ATGCAT | 1 cut(s) | 258 |