Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002362

Physical Location & Seq

Genomic Coordinates Forward (+)

6041018 .. 6044170

Gene Structure 3153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGTGCTTGAATTATTACTGTGTTTTGAATTGCAGTGTGGGCAAGTTGGATTTGAAGCTAGAAAGGTTGAGTCTTTGTGGGGAATTTTCAAGTGGGTTAGTGAAAACAGTTGAGGGTTTTAAGCATAAACCTCAGTCATGTGAGGTCATGGCCTCGTTGCTTCTCCGAGTGGGATTGCTTAGAGAAGTTGAGTTCTTGCTTTCCACAATGGAAAGTAAAGGAGTTTCGTTGGATAGTCAAGAAATTTACAGTGATTTGATTGAAGGGTATGTTGGTATTGGTGAGTTAGATAGGGCCATTTCGGTATATGATCGAATTAGGGGGCGTGTAGTGCCATCATTGCAGTGTTGTTGTGTTCTACTTGATCAATTGGTGGGAATGAGGAAGACCCAATTGGCGTTTCGAATTTGTAGTGATATGGCAGAAATGGGTTTTGATTTGAGATATGTGAAGAAGGCCACATTTGAGGGTGTCATTAGACTGCTTTGCAGGGATGGAAAGATTCAGGAGGCAAGAAATTTTGTCAAGAAGGCTATGGCTTTCAAACTCATGCCTAGCAACTTAGTTTTAAATGAAGTTGCTTATGGATATTGTGAGAAGAAGGATTTTGATGATTTCATGAGCTTCTATGCTGAGATTAAGTGTGCCCCAGAAGTTATGGCTGGGAATAGGATTATGCACTCTCTTTGTAGCCATTTTGGGACAAGAAGAGCAGAACCATATTTGCAAGAACTAGAAATTTTAGGCTTCACTCCTGATGAGGTAACCTTTGGGATCATGATTGGCTGGAGCTGTCGTGAACGAAAACTTAAGAGTGCCTTTGTTTACCTATCAGAGATGTTGGGAAGACACCTAAACCCCCATATATGTACCCATAATGCTCTTATCAGCGGGGTATTTATGGAGGGTATGTGGAAGCATGCTGGGAAGGTGTTTGATGAGATGGTAGATAGGGGGACTACACCTGATTTGTCGACTTTCAGGATTCTCTTAGCAGGCTATTGTAAAGTAAGAAAATTTGATGAAGCCAAAAGGATAATTTTTGATATGGCAAGCCATGGACTGATTCAAAACTCTTCAGATGAGGATCCGCTATCCAAAGCATTTATGGTTCTGGGTTTCAAGCCATTAGCTGTGACATTGAAGAGAGATAATGATGTTGGGTTTGCTAAAACAGAGTTTTATGATGATCCTGGGAATGGACTTTATTTGGATACAGACCTGGATAAGTATGAGAAAAGAATCACTGGGATCCTAGAAGATTGCATGGTACCTGATTTTTACTCTCTTATGATGAAAGAATGCACTCTTGGAAATTTGAAGGGTGCATTGGTTTTGGTAGATGAAATGATCCGGTGGGGACAAGATTTGTCATTGTCTATGATGTCCGACTTACTGAAAGGGCTTTCTGCATCCCATTTACATACCAAGGGAATCACCAGCATTGTAGATAAAAAGCTTCACTTGGTAAATCAGCTAGACCAAGAAACTCTAAACTTTCTTCCCCAAGCATACGCCAAGAAAGGATTGACATATAATACAAGGATAGTGGTGAATGGAATGATAGAAAGGCATCTGAAAATCAACAATGAGACTTACACTGCTTTAGTAAAAGGGCCGGAAGATTGTAAAGCCTTGATTGAATGTCTTTTCCATAAAGAAATGCTAAGAGAAGCAGTGCCGCTTCTTGACAGCATTCTGATATCCTACCCAGACTTAAGGGCTGATAGATTTGGAAAAGCAGTTTACTTGAAAGAGATTGGTCTAAGAGAGAACTCTTCCTATTCACTTTCTCTAGATCGTGCATTGATAAAAGGCTGTTGTATTTCTGGGAAAGTTACAGAAGCAACCACTCTACTACAGAATATGTTGTTAAAGTGGATACCTCCTGATGCTGAAATTTACAATTTTCTGGTTCAGGGTCATTGCAAGGTTAATGACTTAAAGAAAGTTTGGGAGCTACTTTGTGTCATGACAAGAAAAGGTTTTGACATTTCACTCTCAACTTACCGCAACTTGGTGTGTTTGATGTGTCTGGAAGGTAGGGTTCTTCATGCATGGAAATTGACTGAGCTTATGATTGGACAAAGTGATCCTCATGATCTCAGCATCTACAATATTCTGATATTCTATATTTTCCCAACCGGGAATACTTTGCTTGTCAAGAAAGTTGTGGAGCATTTGCAAGAGAAGAAATTGCTACTTGATGAAGTAACTTACAACTTTCTTGTACTTGGGTTTTGTAGAGTAATAATCAGATTTGACCCCACGGTACACTCCCTCAAGGTGAAGCTTTCAAGGAGCGGACAAGAAGAGAATAGATGTGCCAAAAAAACTGAATCAACCACAACATTACTTAGACAAAGAGTTGTAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048037 GO:0051536 GO:0051540 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

792

Amino Acids

90.04

Weight (kDa)

7.98

Isoelectric Point (pI)

31.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	252 - 298	3.7e-06	PPR repeat family
PPR_2	PF13041	287 - 336	2.3e-12	PPR repeat family
PPR_2	PF13041	630 - 678	9.8e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15280
fragaria_vesca	FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880
malus_domestica	MD09G1053400.v1.1
prunus_persica	Prupe.3G265200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581
rosa_laevigata	RLG00000021724 RLG00000021736
rosa_multiflora	Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002
rosa_roxburghii	Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440
rosa_rugosa	Rorug02G0530600
rosa_samantha	Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700
rosa_wichuraiana	Rw2G049750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1270
AccB1I	GGYRCC	1 cut(s)	1270
AccBSI	CCGCTC	1 cut(s)	2304
AccI	GTMKAC	1 cut(s)	974
AciI	CCGC	5 cut(s)	891, 1091, 1682, 2011, 2304
AclWI	GGATC	8 cut(s)	782, 1082, 1095, 1184, 1246, 1259, 1345, 2087
AcsI	RAATTY	8 cut(s)	83, 243, 405, 517, 738, 1016, 1315, 1899
AcuI	CTGAAG	1 cut(s)	1062
AfaI	GTAC	4 cut(s)	871, 1272, 2232, 2274
AfiI	CCNNNNNNNGG	2 cut(s)	1199, 2017
AflII	CTTAAG	2 cut(s)	809, 1717
AjnI	CCWGG	2 cut(s)	1192, 1221
AluBI	AGCT	9 cut(s)	58, 624, 792, 1133, 1459, 1477, 1960, 2074, 2293
AluI	AGCT	9 cut(s)	58, 624, 792, 1133, 1459, 1477, 1960, 2074, 2293
Alw26I	GTCTC	1 cut(s)	1586
AlwI	GGATC	8 cut(s)	782, 1082, 1095, 1184, 1246, 1259, 1345, 2087
AoxI	GGCC	4 cut(s)	150, 294, 456, 1616
ApoI	RAATTY	8 cut(s)	83, 243, 405, 517, 738, 1016, 1315, 1899
Asp718I	GGTACC	1 cut(s)	1270
AspS9I	GGNCC	2 cut(s)	294, 1616
AsuC2I	CCSGG	1 cut(s)	2146
AsuHPI	GGTGA	4 cut(s)	293, 1429, 1564, 2299
AsuII	TTCGAA	1 cut(s)	403
BaeGI	GKGCMC	1 cut(s)	649
BamHI	GGATCC	2 cut(s)	1087, 1251
BanI	GGYRCC	1 cut(s)	1270
BbsI	GAAGAC	2 cut(s)	392, 853
BccI	CCATC	3 cut(s)	343, 488, 937
BciT130I	CCWGG	2 cut(s)	1194, 1223
BciVI	GTATCC	2 cut(s)	1207, 1875
BclI	TGATCA	1 cut(s)	364
BcnI	CCSGG	1 cut(s)	2146
BcoDI	GTCTC	1 cut(s)	1586
BfaI	CTAG	6 cut(s)	59, 555, 734, 1256, 1478, 1796
BfmI	CTRYAG	1 cut(s)	1859
BfrI	CTTAAG	2 cut(s)	809, 1717
BfuI	GTATCC	2 cut(s)	1207, 1875
BisI	GCNGC	1 cut(s)	1682
BlsI	GCNGC	1 cut(s)	1683
Bme1390I	CCNGG	3 cut(s)	1194, 1223, 2146
BmgT120I	GGNCC	2 cut(s)	294, 1616
BmiI	GGNNCC	3 cut(s)	1089, 1253, 1272
BmrFI	CCNGG	3 cut(s)	1194, 1223, 2146
BmrI	ACTGGG	1 cut(s)	1257
BmsI	GCATC	4 cut(s)	1421, 1582, 1882, 2118
BmuI	ACTGGG	1 cut(s)	1257
BpiI	GAAGAC	2 cut(s)	392, 853
BpmI	CTGGAG	1 cut(s)	808
Bpu14I	TTCGAA	1 cut(s)	403
BpuEI	CTTGAG	1 cut(s)	2267
BpuMI	CCSGG	1 cut(s)	2146
BsaBI	GATNNNNATC	1 cut(s)	1086
BsaJI	CCNNGG	4 cut(s)	1057, 1193, 1428, 2268
BsaWI	WCCGGW	1 cut(s)	1353
BsaXI	ACNNNNNCTCC	4 cut(s)	781, 811, 896, 926
Bsc4I	CCNNNNNNNGG	2 cut(s)	1199, 2017
Bse1I	ACTGG	1 cut(s)	1252
Bse3DI	GCAATG	2 cut(s)	338, 1924
Bse8I	GATNNNNATC	1 cut(s)	1086
BseBI	CCWGG	2 cut(s)	1194, 1223
BseDI	CCNNGG	4 cut(s)	1057, 1193, 1428, 2268
BseGI	GGATG	2 cut(s)	499, 1412
BseJI	GATNNNNATC	1 cut(s)	1086
BseLI	CCNNNNNNNGG	2 cut(s)	1199, 2017
BseMI	GCAATG	2 cut(s)	338, 1924
BseMII	CTCAG	4 cut(s)	146, 624, 2061, 2119
BseNI	ACTGG	1 cut(s)	1252
BseSI	GKGCMC	1 cut(s)	649
BseYI	CCCAGC	2 cut(s)	662, 923
BshFI	GGCC	4 cut(s)	152, 296, 458, 1618
BshNI	GGYRCC	1 cut(s)	1270
BsiSI	CCGG	3 cut(s)	1354, 1619, 2145
BslFI	GGGAC	3 cut(s)	715, 970, 1374
BslI	CCNNNNNNNGG	2 cut(s)	1199, 2017
BsmAI	GTCTC	1 cut(s)	1586
BsmFI	GGGAC	3 cut(s)	715, 970, 1374
BsmI	GAATGC	2 cut(s)	1307, 1695
BsnI	GGCC	4 cut(s)	152, 296, 458, 1618
Bsp119I	TTCGAA	1 cut(s)	403
Bsp1286I	GDGCHC	1 cut(s)	649
Bsp19I	CCATGG	1 cut(s)	1057
BspACI	CCGC	5 cut(s)	891, 1091, 1682, 2011, 2304
BspANI	GGCC	4 cut(s)	152, 296, 458, 1618
BspCNI	CTCAG	4 cut(s)	145, 625, 2062, 2118
BspHI	TCATGA	4 cut(s)	618, 777, 1971, 2098
BspLI	GGNNCC	3 cut(s)	1089, 1253, 1272
BspPI	GGATC	8 cut(s)	782, 1082, 1095, 1184, 1246, 1259, 1345, 2087
BspQI	GCTCTTC	1 cut(s)	703
BspT104I	TTCGAA	1 cut(s)	403
BspT107I	GGYRCC	1 cut(s)	1270
BspTI	CTTAAG	2 cut(s)	809, 1717
BsrBI	CCGCTC	1 cut(s)	2304
BsrDI	GCAATG	2 cut(s)	338, 1924
BsrI	ACTGG	1 cut(s)	1252
BssECI	CCNNGG	4 cut(s)	1057, 1193, 1428, 2268
BssT1I	CCWWGG	2 cut(s)	1057, 1428
Bst2UI	CCWGG	2 cut(s)	1194, 1223
Bst4CI	ACNGT	4 cut(s)	20, 109, 251, 2272
Bst6I	CTCTTC	5 cut(s)	703, 1081, 1139, 1783, 2307
BstAFI	CTTAAG	2 cut(s)	809, 1717
BstBI	TTCGAA	1 cut(s)	403
BstC8I	GCNNGC	3 cut(s)	921, 997, 1054
BstDSI	CCRYGG	2 cut(s)	1057, 2268
BstEII	GGTNACC	1 cut(s)	763
BstF5I	GGATG	2 cut(s)	499, 1412
BstMAI	GTCTC	1 cut(s)	1586
BstMWI	GCNNNNNNNGC	3 cut(s)	39, 331, 340
BstNI	CCWGG	2 cut(s)	1194, 1223
BstNSI	RCATGY	1 cut(s)	923
BstPI	GGTNACC	1 cut(s)	763
BstSCI	CCNGG	3 cut(s)	1192, 1221, 2144
BstSFI	CTRYAG	1 cut(s)	1859
BstSLI	GKGCMC	1 cut(s)	649
BstV2I	GAAGAC	2 cut(s)	392, 853
BstX2I	RGATCY	2 cut(s)	1087, 1251
BstYI	RGATCY	2 cut(s)	1087, 1251
BsuI	GTATCC	2 cut(s)	1207, 1875
BsuRI	GGCC	4 cut(s)	152, 296, 458, 1618
BtgI	CCRYGG	2 cut(s)	1057, 2268
BtsCI	GGATG	2 cut(s)	499, 1412
BtsI	GCAGTG	4 cut(s)	40, 350, 1599, 1683
BtsIMutI	CAGTG	6 cut(s)	40, 256, 350, 1245, 1599, 1683
Cac8I	GCNNGC	3 cut(s)	921, 997, 1054
CciI	TCATGA	4 cut(s)	618, 777, 1971, 2098
Cfr13I	GGNCC	2 cut(s)	294, 1616
Csp6I	GTAC	4 cut(s)	870, 1271, 2231, 2273
CspCI	CAANNNNNGTGG	2 cut(s)	1530, 1565
CviQI	GTAC	4 cut(s)	870, 1271, 2231, 2273
DraI	TTTAAA	1 cut(s)	570
Eam1104I	CTCTTC	5 cut(s)	703, 1081, 1139, 1783, 2307
EarI	CTCTTC	5 cut(s)	703, 1081, 1139, 1783, 2307
Eco130I	CCWWGG	2 cut(s)	1057, 1428
Eco32I	GATATC	1 cut(s)	1704
Eco57I	CTGAAG	1 cut(s)	1062
Eco91I	GGTNACC	1 cut(s)	763
EcoO65I	GGTNACC	1 cut(s)	763
EcoRII	CCWGG	2 cut(s)	1192, 1221
EcoRV	GATATC	1 cut(s)	1704
EcoT14I	CCWWGG	2 cut(s)	1057, 1428
EcoT22I	ATGCAT	1 cut(s)	2059
ErhI	CCWWGG	2 cut(s)	1057, 1428
FalI	AAGNNNNNCTT	4 cut(s)	803, 835, 1448, 1480
FaqI	GGGAC	3 cut(s)	715, 970, 1374
FauI	CCCGC	1 cut(s)	884
FbaI	TGATCA	1 cut(s)	364
FblI	GTMKAC	1 cut(s)	974
Fnu4HI	GCNGC	1 cut(s)	1682
FokI	GGATG	2 cut(s)	506, 1399
Fsp4HI	GCNGC	1 cut(s)	1682
FspBI	CTAG	6 cut(s)	59, 555, 734, 1256, 1478, 1796
GluI	GCNGC	1 cut(s)	1682
GsaI	CCCAGC	2 cut(s)	666, 927
GsuI	CTGGAG	1 cut(s)	808
HaeIII	GGCC	4 cut(s)	152, 296, 458, 1618
HapII	CCGG	3 cut(s)	1354, 1619, 2145
HincII	GTYRAC	1 cut(s)	975
HindII	GTYRAC	1 cut(s)	975
HindIII	AAGCTT	2 cut(s)	1457, 2291
HinfI	GANTC	7 cut(s)	70, 502, 985, 1066, 1242, 1434, 2339
HpaII	CCGG	3 cut(s)	1354, 1619, 2145
HphI	GGTGA	4 cut(s)	293, 1429, 1564, 2299
Hpy166II	GTNNAC	5 cut(s)	800, 826, 975, 1747, 2275
Hpy188I	TCNGA	8 cut(s)	167, 835, 1081, 1390, 1578, 1701, 2124, 2258
Hpy8I	GTNNAC	5 cut(s)	800, 826, 975, 1747, 2275
HpyAV	CCTTC	7 cut(s)	257, 448, 523, 595, 922, 1315, 2033
HpyCH4III	ACNGT	4 cut(s)	20, 109, 251, 2272
HpyF10VI	GCNNNNNNNGC	3 cut(s)	39, 331, 340
KpnI	GGTACC	1 cut(s)	1274
Ksp22I	TGATCA	1 cut(s)	364
LguI	GCTCTTC	1 cut(s)	703
LmnI	GCTCC	4 cut(s)	789, 1957, 2176, 2301
LweI	GCATC	4 cut(s)	1421, 1582, 1882, 2118
MaeI	CTAG	6 cut(s)	59, 555, 734, 1256, 1478, 1796
MaeIII	GTNAC	4 cut(s)	763, 1135, 1837, 2212
MbiI	CCGCTC	1 cut(s)	2304
MfeI	CAATTG	2 cut(s)	368, 392
MflI	RGATCY	2 cut(s)	1087, 1251
MhlI	GDGCHC	1 cut(s)	649
MlyI	GAGTC	1 cut(s)	79
MmeI	TCCRAC	3 cut(s)	27, 210, 1413
Mph1103I	ATGCAT	1 cut(s)	2059
MseI	TTAA	8 cut(s)	120, 569, 639, 810, 1718, 1874, 1935, 1943
MslI	CAYNNNNRTG	1 cut(s)	343
MspA1I	CMGCKG	1 cut(s)	891
MspCI	CTTAAG	2 cut(s)	809, 1717
MspI	CCGG	3 cut(s)	1354, 1619, 2145
MspR9I	CCNGG	3 cut(s)	1194, 1223, 2146
MunI	CAATTG	2 cut(s)	368, 392
Mva1269I	GAATGC	2 cut(s)	1307, 1695
MvaI	CCWGG	2 cut(s)	1194, 1223
MwoI	GCNNNNNNNGC	3 cut(s)	39, 331, 340
NciI	CCSGG	1 cut(s)	2146
NcoI	CCATGG	1 cut(s)	1057
NlaIV	GGNNCC	3 cut(s)	1089, 1253, 1272
NmuCI	GTSAC	1 cut(s)	1135
NsiI	ATGCAT	1 cut(s)	2059
NspI	RCATGY	1 cut(s)	923
NspV	TTCGAA	1 cut(s)	403
PaeI	GCATGC	1 cut(s)	923
PagI	TCATGA	4 cut(s)	618, 777, 1971, 2098
PciSI	GCTCTTC	1 cut(s)	703
PctI	GAATGC	2 cut(s)	1307, 1695
PfeI	GAWTC	6 cut(s)	502, 985, 1066, 1242, 1434, 2339
PkrI	GCNGC	1 cut(s)	1683
PleI	GAGTC	1 cut(s)	78
PpsI	GAGTC	1 cut(s)	78
Psp6I	CCWGG	2 cut(s)	1192, 1221
PspEI	GGTNACC	1 cut(s)	763
PspFI	CCCAGC	2 cut(s)	662, 923
PspGI	CCWGG	2 cut(s)	1192, 1221
PspN4I	GGNNCC	3 cut(s)	1089, 1253, 1272
PspPI	GGNCC	2 cut(s)	294, 1616
PsuI	RGATCY	2 cut(s)	1087, 1251
RsaI	GTAC	4 cut(s)	871, 1272, 2232, 2274
RsaNI	GTAC	4 cut(s)	870, 1271, 2231, 2273
RseI	CAYNNNNRTG	1 cut(s)	343
SalI	GTCGAC	1 cut(s)	973
SapI	GCTCTTC	1 cut(s)	703
SaqAI	TTAA	8 cut(s)	120, 569, 639, 810, 1718, 1874, 1935, 1943
SatI	GCNGC	1 cut(s)	1682
Sau96I	GGNCC	2 cut(s)	294, 1616
SchI	GAGTC	1 cut(s)	79
ScrFI	CCNGG	3 cut(s)	1194, 1223, 2146
SduI	GDGCHC	1 cut(s)	649
SfaNI	GCATC	4 cut(s)	1421, 1582, 1882, 2118
SfcI	CTRYAG	1 cut(s)	1859
SfuI	TTCGAA	1 cut(s)	403
SmiMI	CAYNNNNRTG	1 cut(s)	343
SmlI	CTYRAG	3 cut(s)	809, 1717, 2282
SmoI	CTYRAG	3 cut(s)	809, 1717, 2282
SphI	GCATGC	1 cut(s)	923
SsiI	CCGC	5 cut(s)	891, 1091, 1682, 2011, 2304
SspI	AATATT	1 cut(s)	2119
SspMI	CTAG	6 cut(s)	59, 555, 734, 1256, 1478, 1796
StyD4I	CCNGG	3 cut(s)	1192, 1221, 2144
StyI	CCWWGG	2 cut(s)	1057, 1428
TaaI	ACNGT	4 cut(s)	20, 109, 251, 2272
TaqI	TCGA	3 cut(s)	313, 403, 974
TatI	WGTACW	1 cut(s)	2230
TauI	GCSGC	1 cut(s)	1684
TfiI	GAWTC	6 cut(s)	502, 985, 1066, 1242, 1434, 2339
Tru1I	TTAA	8 cut(s)	120, 569, 639, 810, 1718, 1874, 1935, 1943
Tru9I	TTAA	8 cut(s)	120, 569, 639, 810, 1718, 1874, 1935, 1943
TscAI	CASTG	6 cut(s)	40, 256, 350, 1252, 1606, 1683
TseFI	GTSAC	1 cut(s)	1135
Tsp45I	GTSAC	1 cut(s)	1135
TspDTI	ATGAA	7 cut(s)	588, 607, 1038, 1310, 1359, 2042, 2223
TspRI	CASTG	6 cut(s)	40, 256, 350, 1252, 1606, 1683
Vha464I	CTTAAG	2 cut(s)	809, 1717
XapI	RAATTY	8 cut(s)	83, 243, 405, 517, 738, 1016, 1315, 1899
XbaI	TCTAGA	1 cut(s)	1795
XceI	RCATGY	1 cut(s)	923
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1105
XmiI	GTMKAC	1 cut(s)	974
XspI	CTAG	6 cut(s)	59, 555, 734, 1256, 1478, 1796
Zsp2I	ATGCAT	1 cut(s)	2059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.