Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15280 |
| fragaria_vesca | FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880 |
| malus_domestica | MD09G1053400.v1.1 |
| prunus_persica | Prupe.3G265200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581 |
| rosa_laevigata | RLG00000021724 RLG00000021736 |
| rosa_multiflora | Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440 |
| rosa_rugosa | Rorug02G0530600 |
| rosa_samantha | Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700 |
| rosa_wichuraiana | Rw2G049750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 543 |
| AccI | GTMKAC | 1 cut(s) | 56 |
| AciI | CCGC | 1 cut(s) | 356 |
| AcsI | RAATTY | 1 cut(s) | 297 |
| AgsI | TTSAA | 4 cut(s) | 47, 145, 317, 599 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 309, 341, 431, 438, 463, 470 |
| AluBI | AGCT | 3 cut(s) | 26, 40, 678 |
| AluI | AGCT | 3 cut(s) | 26, 40, 678 |
| Alw21I | GWGCWC | 1 cut(s) | 703 |
| Alw44I | GTGCAC | 1 cut(s) | 699 |
| AoxI | GGCC | 2 cut(s) | 204, 510 |
| ApaLI | GTGCAC | 1 cut(s) | 699 |
| ApeKI | GCWGC | 1 cut(s) | 40 |
| ApoI | RAATTY | 1 cut(s) | 297 |
| BaeGI | GKGCMC | 1 cut(s) | 703 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 33 |
| BbsI | GAAGAC | 1 cut(s) | 446 |
| Bbv12I | GWGCWC | 1 cut(s) | 703 |
| BbvI | GCAGC | 1 cut(s) | 27 |
| BccI | CCATC | 3 cut(s) | 161, 475, 542 |
| BclI | TGATCA | 1 cut(s) | 418 |
| BfaI | CTAG | 3 cut(s) | 114, 567, 609 |
| BfuAI | ACCTGC | 1 cut(s) | 543 |
| BisI | GCNGC | 1 cut(s) | 41 |
| BlsI | GCNGC | 1 cut(s) | 42 |
| BmiI | GGNNCC | 1 cut(s) | 784 |
| BmsI | GCATC | 2 cut(s) | 100, 201 |
| BpiI | GAAGAC | 1 cut(s) | 446 |
| Bse3DI | GCAATG | 1 cut(s) | 392 |
| BseGI | GGATG | 1 cut(s) | 553 |
| BseMI | GCAATG | 1 cut(s) | 392 |
| BseMII | CTCAG | 2 cut(s) | 200, 678 |
| BseSI | GKGCMC | 1 cut(s) | 703 |
| BseXI | GCAGC | 1 cut(s) | 27 |
| BseYI | CCCAGC | 1 cut(s) | 716 |
| BshFI | GGCC | 2 cut(s) | 206, 512 |
| BsiHKAI | GWGCWC | 1 cut(s) | 703 |
| BslFI | GGGAC | 1 cut(s) | 761 |
| BsmFI | GGGAC | 1 cut(s) | 761 |
| BsmI | GAATGC | 1 cut(s) | 733 |
| BsnI | GGCC | 2 cut(s) | 206, 512 |
| Bsp1286I | GDGCHC | 1 cut(s) | 703 |
| Bsp143I | GATC | 2 cut(s) | 364, 418 |
| BspACI | CCGC | 1 cut(s) | 356 |
| BspANI | GGCC | 2 cut(s) | 206, 512 |
| BspCNI | CTCAG | 2 cut(s) | 199, 679 |
| BspLI | GGNNCC | 1 cut(s) | 784 |
| BspMI | ACCTGC | 1 cut(s) | 543 |
| BsrDI | GCAATG | 1 cut(s) | 392 |
| BssMI | GATC | 2 cut(s) | 364, 418 |
| Bst4CI | ACNGT | 3 cut(s) | 90, 305, 817 |
| Bst6I | CTCTTC | 1 cut(s) | 67 |
| BstDEI | CTNAG | 3 cut(s) | 186, 233, 687 |
| BstF5I | GGATG | 1 cut(s) | 553 |
| BstKTI | GATC | 2 cut(s) | 367, 421 |
| BstMBI | GATC | 2 cut(s) | 364, 418 |
| BstSLI | GKGCMC | 1 cut(s) | 703 |
| BstV1I | GCAGC | 1 cut(s) | 27 |
| BstV2I | GAAGAC | 1 cut(s) | 446 |
| BsuRI | GGCC | 2 cut(s) | 206, 512 |
| BtsCI | GGATG | 1 cut(s) | 553 |
| BtsI | GCAGTG | 1 cut(s) | 404 |
| BtsIMutI | CAGTG | 3 cut(s) | 95, 310, 404 |
| BveI | ACCTGC | 1 cut(s) | 543 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 73, 108 |
| CviAII | CATG | 2 cut(s) | 192, 202 |
| DdeI | CTNAG | 3 cut(s) | 186, 233, 687 |
| DpnI | GATC | 2 cut(s) | 366, 420 |
| DpnII | GATC | 2 cut(s) | 364, 418 |
| DraI | TTTAAA | 1 cut(s) | 624 |
| Eam1104I | CTCTTC | 1 cut(s) | 67 |
| EarI | CTCTTC | 1 cut(s) | 67 |
| EcoT22I | ATGCAT | 1 cut(s) | 735 |
| FaeI | CATG | 2 cut(s) | 195, 205 |
| FaqI | GGGAC | 1 cut(s) | 761 |
| FatI | CATG | 2 cut(s) | 191, 201 |
| FbaI | TGATCA | 1 cut(s) | 418 |
| FblI | GTMKAC | 1 cut(s) | 56 |
| Fnu4HI | GCNGC | 1 cut(s) | 41 |
| FokI | GGATG | 1 cut(s) | 560 |
| Fsp4HI | GCNGC | 1 cut(s) | 41 |
| FspBI | CTAG | 3 cut(s) | 114, 567, 609 |
| GluI | GCNGC | 1 cut(s) | 41 |
| GsaI | CCCAGC | 1 cut(s) | 720 |
| HaeIII | GGCC | 2 cut(s) | 206, 512 |
| Hin1II | CATG | 2 cut(s) | 195, 205 |
| HinfI | GANTC | 3 cut(s) | 125, 268, 556 |
| Hpy166II | GTNNAC | 2 cut(s) | 57, 701 |
| Hpy188I | TCNGA | 1 cut(s) | 221 |
| Hpy188III | TCNNGA | 2 cut(s) | 488, 560 |
| Hpy8I | GTNNAC | 2 cut(s) | 57, 701 |
| HpyAV | CCTTC | 2 cut(s) | 311, 649 |
| HpyCH4III | ACNGT | 3 cut(s) | 90, 305, 817 |
| HpyCH4V | TGCA | 6 cut(s) | 397, 543, 701, 733, 773, 799 |
| HpyF3I | CTNAG | 3 cut(s) | 186, 233, 687 |
| Hsp92II | CATG | 2 cut(s) | 195, 205 |
| Ksp22I | TGATCA | 1 cut(s) | 418 |
| Kzo9I | GATC | 2 cut(s) | 364, 418 |
| LpnPI | CCDG | 6 cut(s) | 323, 529, 545, 548, 702, 717 |
| Lsp1109I | GCAGC | 1 cut(s) | 27 |
| LweI | GCATC | 2 cut(s) | 100, 201 |
| MaeI | CTAG | 3 cut(s) | 114, 567, 609 |
| MaeIII | GTNAC | 2 cut(s) | 305, 411 |
| MalI | GATC | 2 cut(s) | 366, 420 |
| MboI | GATC | 2 cut(s) | 364, 418 |
| MboII | GAAGA | 3 cut(s) | 54, 451, 565 |
| MfeI | CAATTG | 2 cut(s) | 422, 446 |
| MhlI | GDGCHC | 1 cut(s) | 703 |
| MluCI | AATT | 7 cut(s) | 297, 369, 422, 446, 613, 630, 800 |
| MlyI | GAGTC | 2 cut(s) | 134, 277 |
| MmeI | TCCRAC | 2 cut(s) | 82, 760 |
| Mph1103I | ATGCAT | 1 cut(s) | 735 |
| MseI | TTAA | 4 cut(s) | 174, 531, 623, 693 |
| MslI | CAYNNNNRTG | 2 cut(s) | 397, 824 |
| MunI | CAATTG | 2 cut(s) | 422, 446 |
| Mva1269I | GAATGC | 1 cut(s) | 733 |
| NdeII | GATC | 2 cut(s) | 364, 418 |
| NlaIII | CATG | 2 cut(s) | 195, 205 |
| NlaIV | GGNNCC | 1 cut(s) | 784 |
| NmuCI | GTSAC | 1 cut(s) | 305 |
| NsiI | ATGCAT | 1 cut(s) | 735 |
| PctI | GAATGC | 1 cut(s) | 733 |
| PfeI | GAWTC | 1 cut(s) | 556 |
| PkrI | GCNGC | 1 cut(s) | 42 |
| PleI | GAGTC | 2 cut(s) | 133, 276 |
| PpsI | GAGTC | 2 cut(s) | 133, 276 |
| PspFI | CCCAGC | 1 cut(s) | 716 |
| PspN4I | GGNNCC | 1 cut(s) | 784 |
| RseI | CAYNNNNRTG | 2 cut(s) | 397, 824 |
| SaqAI | TTAA | 4 cut(s) | 174, 531, 623, 693 |
| SatI | GCNGC | 1 cut(s) | 41 |
| Sau3AI | GATC | 2 cut(s) | 364, 418 |
| SchI | GAGTC | 2 cut(s) | 134, 277 |
| SduI | GDGCHC | 1 cut(s) | 703 |
| SfaNI | GCATC | 2 cut(s) | 100, 201 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 397, 824 |
| Sse9I | AATT | 7 cut(s) | 297, 369, 422, 446, 613, 630, 800 |
| SsiI | CCGC | 1 cut(s) | 356 |
| SspMI | CTAG | 3 cut(s) | 114, 567, 609 |
| TaaI | ACNGT | 3 cut(s) | 90, 305, 817 |
| TaqI | TCGA | 3 cut(s) | 209, 367, 457 |
| TasI | AATT | 7 cut(s) | 297, 369, 422, 446, 613, 630, 800 |
| TfiI | GAWTC | 1 cut(s) | 556 |
| Tru1I | TTAA | 4 cut(s) | 174, 531, 623, 693 |
| Tru9I | TTAA | 4 cut(s) | 174, 531, 623, 693 |
| TscAI | CASTG | 3 cut(s) | 95, 310, 404 |
| TseFI | GTSAC | 1 cut(s) | 305 |
| TseI | GCWGC | 1 cut(s) | 40 |
| Tsp45I | GTSAC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 1 cut(s) | 642 |
| TspRI | CASTG | 3 cut(s) | 95, 310, 404 |
| VneI | GTGCAC | 1 cut(s) | 699 |
| XapI | RAATTY | 1 cut(s) | 297 |
| XmiI | GTMKAC | 1 cut(s) | 56 |
| XspI | CTAG | 3 cut(s) | 114, 567, 609 |
| Zsp2I | ATGCAT | 1 cut(s) | 735 |