Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002362

Physical Location & Seq

Genomic Coordinates Reverse (-)

36313575 .. 36318098

Gene Structure 4524 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g48150.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3636 bp

ATGAGAGGAAGCATTACTACCATTGCTCTATACAATGTGCTGCTTCCAGTTTTGTCTACCTCTTCACTCCACAAGCCTCACATCAAACAGGTTGGTTCTCTCTACTCTCTGTTCTCATCATCATCATCTTCAACAACCCAAGTAGATTCATCTCCTAATTGTTTCAAAGGTTTAGTGCCTCAACTGACTCGTAGGCTTAGGCGGGTTTCGGAGCCGAAACCCGAAGATGTGCTTGAATTATTGCTGGGTTTTGAATTGCAGTGTGGGAAAGTTGGATTTGATGCTAGAAAGGTTGAGTCTTTGTGGGGAGTTTTCAAGTGGGTTAGTGAGAAAGTTGAGGGTTTTAAGCATAAACCTCGGTCATGTGAGGTCATGGCCTCAATGCTTGTCAGAGTGGGATTGATTAGAGAAGTTGATGTCTTGCTTTCCACAATGGAGAGTCAAGGAGTTTTGTTGGGTAGTGGAGAAATTTACAGTGATTTGATTGAAGGGTATGTTGGTGTTGGTGAGTTAGATAGGGCTATTGCGGTGTATGATCGAATTAGGGGGCGTGTAGTGCCATCATTGCAGTGTTGTGGTGTGCTACTTGACGAATTGGTGGGAATGAGGAAGACCCAATTGGCGTTTCGAGTTTGTAGTGATATGGTGGAGATGGGTTTTGATTTGATAGATGTGAAGAAGGCCACATTTGAGGGTGTCATTAAGCTGCTTTGCAGGGATGGGAAGATTCAGGAGGCAAGAGATTTTGTCAAGGAGGCTATGGCTTTCGAAATCAAGCCTAGCAACTTGGTTTTAAATGAAGTTGCATATGGTTATTGTGAGAAGAAGGACTTTGATGATTTGATGAGCTTTTATGCTGAGATAAAGTGTGCCCCAGAAGTTGTGGCTGGGAATAGGGTTATGCATTCTCTTTGTAGCCATTTTGGAACAAGAAGAGCAGAACCATATTTGCAAGAGTTGGAACTTTTAGGCTTCAATCCTGATGAGGTAACCTTTGGGATCATGATTGGATGGAGCTGTCGTGAACAGAAACTAAAAAGTGCTTTTCTTTACCTATCAGAGATGTTGAGAAGACACTTAAACCCCCATGTATGCACCTATAATGCTCTTATCAGTGGGGTCTTTATGGAGGGTATGTGGAAGCATGCTGGGGAAGTCTTTGCTGAGATGGTAGATAGGGGGACTACACCTGATTTGTCGACTTTCAGGATTCTTTTAGCAGGCTATTGTAAAGCTAGACAATTTGATGAAGCCAAAAGGATAGTTTTTGATATGGCAAGCCATGGACTGATTCAACTCTCTTCAGATGAGGATCCACTAACCAAAGCATTTATGGTTCTGGGTTTCAAGCCATTAGCTGTGACACTGAAGAGAGATAATGATGTGGGATTTGCTAAAACGGAGTTTTATGATAATCTTGGGAATGGACTTTATTTGGATACAGACCTGGATGAGTACGAGAAAAGAATGACCAGGATCCTAGAAGATTGCATGGTACCCGATTATTACTCTCTTATGAAGAAAGAATGCACTCGGGGAAATTTGAAGGGTGCATTGGTTTTGGCAGATGAAATGATCCGGTGGGGACAAGATTTGTCATTGTCTATGATCTCCGACTTACTGAAAGGGCTTTCTGCATCCCATTTACATACCAAGGAAATCACCAGCATTGTAGATAAAAAGCTTCACTTGGTAAATCAGCTAGACCAAGAAACTCTGAACTTTCTTGCCCAAGCATACGGCAAGAAAGGATTGACATATAATACAAGGATAGTAGTGAATGGAATGATAGAAAGGCATCTGAAAATCAACAACGAGACTTACACTGCTTTAGTAAAAGGTTTTTGTAAAAAAGGAAACTTGAGGGAGCTGAATGCTTGCTGGAATCTTGCTCAAATTGACGGATGGTTACCAAGGCCGGAAGATTGTAAGGCCTTGATTGAATGTCTTTTCCTTCATAAAATGCTAAGAGAAGCAGTGCAGCTTCTTGAAAGCATTCTGATATCCTACCCAGACTTAAGGTCAGATATGTGTCATATGATCCTAGACAAGCTGTTTGTTACAGGTTGTACGGGAATTGCAAGCACATTGTTAGAAGATCTTGAACAGCGTGGCAACATCTTGGATCAGATGGCTTATAACAGTCTTATTAGAGGATTGTGCAAGGAGAAGAATTTTCGTGTAGCCTTTACAGTGCTGGACAGTATGCTGGCTAAAAATTTTGCTCCATGTTTGGATGTTACTGTGCAGTTAATTCCTCGGTTGTGCAAGGCTGATAGATTTGGAAAAGTGGTGCACTTGAAAGAGATTGGTCTAAGAGAGAAATCATCGTTTTCACTTTCTCTAGATCATGCATTAATAGAAGGCTGTTGTATTTCAGGGAAAGTTACAGAAGCAATCACTCTACTACAGAGTATGCTGTTAAAGGGGATACATCCTGATGCTAAAATTTATAATTTTCTGGTTCAGGGTCATTGCAAGGTTAACGACTTAAAGAAAGTTTGGGAGTTACTTTGTGTTATGACAAGAAAAAGTTCCAACATTTCACTCTCAACTTACCGCAATATGGTGGGTTTGATGTCTCTGGAAGGTAGAGTTTTTCATGCATGGAACTTGACTGAACTTATGATTGGACAAAATGATCCTCATGAGCTCAGCATCTACAATATTCTGATATTCTATATTTTCCCAACAGGGAATACTTTGCTTGTGAAGAAAGTTGTAGAGCGGTTGCAAGATAAGAAATTGCTACTTGATGAAGTAACTTACAACTTTCTTGTACATGGGTTTTGTCGATGTAAAGATGTGTTGAGTGCCGAGGACCATCTGTACACTATGATCTCTAAGGATTTCAGACCAAGCAACCGCAACTTGAGAAAAGTTATAATCGGCCTATGTGATATGGGGGAGATTGAGAAAGCCTCAGAATTGAGTCGACAGATGGAATTGAGAGGCTGGATTCATGATTCAATTATTCAAAACGCAATAGTTGAAGGCCTTCTTTCTCACGGTAGGGTTCAAGAAGCTGAAAATTTTCTGGACAGGATGGTAGAAAAATGTTTAATTCCAGAAAATGTCAACTATGATAATATAATCAAACTATTTTGCTCGTATGGAGGACCGGTTAGGGCAGTTAGCCTTCTGGATATAATGCTGAAGAAAGGGAATGTTCCAGATTCTACCAGTTATGATTCCCTCATTAGTTCTTTCTGTGCACTTTATAATCTGGAGCAAGCTATGGATTTTCATGCCGAGATGCTGGATAGAAATCTTAAGCCAAGCATAGGCACTTGGGACATTCTGGTCCATAACCTTTGCCAATATGGAAAAACAGCAGTGGCAGAAAGGCTTTTGAAGTCAATGGTTTGTGCAGGTGAAACAGTGACCATGAAGATATACTTGTCTGTAATTAATAGGTATCGCTCAGAGAACAATCTTGGAAAGGTCTCGGAGCTCATGCAAGCAATGCAACAGAGTGGTTATGAGCCAGACTTTGAGTCACATTGGTCTCTCATAAGGAATTTAAGACTTTCTAGTGACAAGGACAATGCAAACAGCAGCAAGGGTTTCCTGTCAAAGCTTCTGTCTGCAAGTGGATTTTCTAGGCAAAAGTATTCCAAGGCCAAACAAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048037 GO:0051536 GO:0051540 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

1212

Amino Acids

136.89

Weight (kDa)

7.11

Isoelectric Point (pI)

32.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	327 - 372	2.6e-07	PPR repeat family
PPR_2	PF13041	362 - 411	1.5e-13	PPR repeat family
PPR_2	PF13041	813 - 857	8.1e-06	PPR repeat family
PPR_2	PF13041	1024 - 1071	3.4e-07	PPR repeat family
PPR_2	PF13041	1058 - 1107	3.7e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15280
fragaria_vesca	FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880
malus_domestica	MD09G1053400.v1.1
prunus_persica	Prupe.3G265200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581
rosa_laevigata	RLG00000021724 RLG00000021736
rosa_multiflora	Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002
rosa_roxburghii	Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440
rosa_rugosa	Rorug02G0530600
rosa_samantha	Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700
rosa_wichuraiana	Rw2G049750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	2139, 2454, 2885, 3222
AarI	CACCTGC	1 cut(s)	3362
AasI	GACNNNNNNGTC	1 cut(s)	3302
Acc36I	ACCTGC	1 cut(s)	3362
Acc65I	GGTACC	1 cut(s)	1495
AccB1I	GGYRCC	1 cut(s)	1495
AccBSI	CCGCTC	1 cut(s)	2728
AccI	GTMKAC	3 cut(s)	56, 1199, 2935
AciI	CCGC	5 cut(s)	202, 527, 2560, 2728, 2866
AclWI	GGATC	9 cut(s)	1007, 1307, 1320, 1471, 1484, 1570, 2035, 2133, 2636
AcsI	RAATTY	7 cut(s)	468, 1540, 2173, 2218, 2448, 3031, 3520
AcuI	CTGAAG	3 cut(s)	1287, 1388, 3176
AfaI	GTAC	5 cut(s)	1457, 1497, 2071, 2781, 2831
AfiI	CCNNNNNNNGG	3 cut(s)	2566, 3284, 3630
AflII	CTTAAG	2 cut(s)	2017, 3272
AgeI	ACCGGT	1 cut(s)	3121
AhdI	GACNNNNNGTC	2 cut(s)	2020, 3496
AjnI	CCWGG	2 cut(s)	1446, 1472
Alw21I	GWGCWC	4 cut(s)	2298, 2655, 3217, 3456
Alw26I	GTCTC	4 cut(s)	1811, 2586, 3451, 3513
Alw44I	GTGCAC	2 cut(s)	2294, 3213
AlwI	GGATC	9 cut(s)	1007, 1307, 1320, 1471, 1484, 1570, 2035, 2133, 2636
Ama87I	CYCGRG	1 cut(s)	1533
AoxI	GGCC	7 cut(s)	375, 681, 1916, 1932, 2890, 2995, 3621
ApaLI	GTGCAC	2 cut(s)	2294, 3213
ApeKI	GCWGC	4 cut(s)	40, 706, 1981, 3558
ApoI	RAATTY	7 cut(s)	468, 1540, 2173, 2218, 2448, 3031, 3520
ArsI	GACNNNNNNTTYG	4 cut(s)	2039, 2071, 3569, 3601
AseI	ATTAAT	2 cut(s)	2357, 3411
AsiGI	ACCGGT	1 cut(s)	3121
Asp700I	GAANNNNTTC	4 cut(s)	1995, 2533, 2997, 3033
Asp718I	GGTACC	1 cut(s)	1495
AspS9I	GGNCC	3 cut(s)	2821, 3119, 3304
AsuHPI	GGTGA	3 cut(s)	518, 1654, 3386
AsuII	TTCGAA	1 cut(s)	768
AvaI	CYCGRG	1 cut(s)	1533
AvaII	GGWCC	3 cut(s)	2821, 3119, 3304
BaeGI	GKGCMC	3 cut(s)	874, 2298, 3217
BamHI	GGATCC	2 cut(s)	1312, 1476
BanI	GGYRCC	1 cut(s)	1495
BanII	GRGCYC	2 cut(s)	2655, 3456
BarI	GAAGNNNNNNTAC	1 cut(s)	33
BbsI	GAAGAC	2 cut(s)	617, 1078
Bbv12I	GWGCWC	4 cut(s)	2298, 2655, 3217, 3456
BbvI	GCAGC	4 cut(s)	27, 693, 1993, 3570
BceAI	ACGGC	1 cut(s)	1756
BcgI	CGANNNNNNTGC	2 cut(s)	338, 372
BciT130I	CCWGG	2 cut(s)	1448, 1474
BciVI	GTATCC	2 cut(s)	1432, 2424
BcoDI	GTCTC	4 cut(s)	1811, 2586, 3451, 3513
BfaI	CTAG	9 cut(s)	285, 780, 1236, 1481, 1703, 2045, 2345, 3534, 3603
BfmI	CTRYAG	1 cut(s)	2408
BfrI	CTTAAG	2 cut(s)	2017, 3272
BfuAI	ACCTGC	1 cut(s)	3362
BfuI	GTATCC	2 cut(s)	1432, 2424
BglII	AGATCT	1 cut(s)	2098
BisI	GCNGC	4 cut(s)	41, 707, 1982, 3559
BlpI	GCTNAGC	1 cut(s)	2654
BlsI	GCNGC	4 cut(s)	42, 708, 1983, 3560
Bme1390I	CCNGG	2 cut(s)	1448, 1474
Bme18I	GGWCC	3 cut(s)	2821, 3119, 3304
BmeRI	GACNNNNNGTC	2 cut(s)	2020, 3496
BmeT110I	CYCGRG	1 cut(s)	1533
BmgT120I	GGNCC	3 cut(s)	2821, 3119, 3304
BmiI	GGNNCC	4 cut(s)	213, 1314, 1478, 1497
BmrFI	CCNGG	2 cut(s)	1448, 1474
BmsI	GCATC	6 cut(s)	271, 1646, 1807, 2431, 2667, 3246
BpiI	GAAGAC	2 cut(s)	617, 1078
BplI	GAGNNNNNCTC	2 cut(s)	2906, 2938
BpmI	CTGGAG	1 cut(s)	3248
Bpu10I	CCTNAGC	1 cut(s)	197
Bpu1102I	GCTNAGC	1 cut(s)	2654
Bpu14I	TTCGAA	1 cut(s)	768
BpuEI	CTTGAG	2 cut(s)	1882, 2893
BsaBI	GATNNNNATC	2 cut(s)	1311, 3267
BsaI	GGTCTC	2 cut(s)	3451, 3513
BsaJI	CCNNGG	7 cut(s)	356, 1282, 1653, 1913, 2258, 2817, 3618
BsaWI	WCCGGW	2 cut(s)	1578, 3121
BsaXI	ACNNNNNCTCC	6 cut(s)	1006, 1036, 1121, 1151, 3108, 3138
Bsc4I	CCNNNNNNNGG	3 cut(s)	2566, 3284, 3630
Bse118I	RCCGGY	1 cut(s)	3121
Bse1I	ACTGG	2 cut(s)	47, 3183
Bse3DI	GCAATG	4 cut(s)	21, 563, 2473, 3471
Bse8I	GATNNNNATC	2 cut(s)	1311, 3267
BseBI	CCWGG	2 cut(s)	1448, 1474
BseDI	CCNNGG	7 cut(s)	356, 1282, 1653, 1913, 2258, 2817, 3618
BseGI	GGATG	8 cut(s)	724, 1016, 1456, 1637, 1910, 2242, 2434, 3051
BseJI	GATNNNNATC	2 cut(s)	1311, 3267
BseLI	CCNNNNNNNGG	3 cut(s)	2566, 3284, 3630
BseMI	GCAATG	4 cut(s)	21, 563, 2473, 3471
BseMII	CTCAG	5 cut(s)	849, 1155, 2668, 2937, 3438
BseNI	ACTGG	2 cut(s)	47, 3183
BseSI	GKGCMC	3 cut(s)	874, 2298, 3217
BseXI	GCAGC	4 cut(s)	27, 693, 1993, 3570
BseYI	CCCAGC	3 cut(s)	244, 887, 1148
BsgI	GTGCAG	3 cut(s)	2000, 2267, 3390
BshFI	GGCC	7 cut(s)	377, 683, 1918, 1934, 2892, 2997, 3623
BshNI	GGYRCC	1 cut(s)	1495
BshTI	ACCGGT	1 cut(s)	3121
BsiHKAI	GWGCWC	4 cut(s)	2298, 2655, 3217, 3456
BsiHKCI	CYCGRG	1 cut(s)	1533
BsiSI	CCGG	3 cut(s)	1579, 1919, 3122
BslFI	GGGAC	3 cut(s)	1195, 1599, 3308
BslI	CCNNNNNNNGG	3 cut(s)	2566, 3284, 3630
BsmAI	GTCTC	4 cut(s)	1811, 2586, 3451, 3513
BsmFI	GGGAC	3 cut(s)	1195, 1599, 3308
BsmI	GAATGC	4 cut(s)	904, 1532, 1879, 1995
BsnI	GGCC	7 cut(s)	377, 683, 1918, 1934, 2892, 2997, 3623
Bso31I	GGTCTC	2 cut(s)	3451, 3513
BsoBI	CYCGRG	1 cut(s)	1533
Bsp119I	TTCGAA	1 cut(s)	768
Bsp1286I	GDGCHC	5 cut(s)	874, 2298, 2655, 3217, 3456
Bsp1407I	TGTACA	2 cut(s)	2779, 2829
Bsp1720I	GCTNAGC	1 cut(s)	2654
Bsp19I	CCATGG	1 cut(s)	1282
BspACI	CCGC	5 cut(s)	202, 527, 2560, 2728, 2866
BspANI	GGCC	7 cut(s)	377, 683, 1918, 1934, 2892, 2997, 3623
BspCNI	CTCAG	5 cut(s)	850, 1156, 2667, 2936, 3437
BspHI	TCATGA	3 cut(s)	1002, 2647, 2962
BspLI	GGNNCC	4 cut(s)	213, 1314, 1478, 1497
BspMI	ACCTGC	1 cut(s)	3362
BspPI	GGATC	9 cut(s)	1007, 1307, 1320, 1471, 1484, 1570, 2035, 2133, 2636
BspQI	GCTCTTC	1 cut(s)	928
BspT104I	TTCGAA	1 cut(s)	768
BspT107I	GGYRCC	1 cut(s)	1495
BspTI	CTTAAG	2 cut(s)	2017, 3272
BspTNI	GGTCTC	2 cut(s)	3451, 3513
BsrBI	CCGCTC	1 cut(s)	2728
BsrDI	GCAATG	4 cut(s)	21, 563, 2473, 3471
BsrFI	RCCGGY	1 cut(s)	3121
BsrGI	TGTACA	2 cut(s)	2779, 2829
BsrI	ACTGG	2 cut(s)	47, 3183
BssAI	RCCGGY	1 cut(s)	3121
BssECI	CCNNGG	7 cut(s)	356, 1282, 1653, 1913, 2258, 2817, 3618
BssT1I	CCWWGG	4 cut(s)	1282, 1653, 1913, 3618
Bst2UI	CCWGG	2 cut(s)	1448, 1474
Bst4CI	ACNGT	7 cut(s)	476, 2144, 2194, 2204, 2245, 3011, 3382
Bst6I	CTCTTC	4 cut(s)	67, 928, 1306, 1364
BstAFI	CTTAAG	2 cut(s)	2017, 3272
BstAPI	GCANNNNNTGC	1 cut(s)	3466
BstAUI	TGTACA	2 cut(s)	2779, 2829
BstBI	TTCGAA	1 cut(s)	768
BstC8I	GCNNGC	8 cut(s)	1146, 1222, 1279, 1879, 2083, 2211, 3234, 3462
BstDEI	CTNAG	9 cut(s)	197, 858, 1164, 1967, 2315, 2654, 2844, 2923, 3424
BstDSI	CCRYGG	1 cut(s)	1282
BstEII	GGTNACC	2 cut(s)	988, 1908
BstF5I	GGATG	8 cut(s)	724, 1016, 1456, 1637, 1910, 2242, 2434, 3051
BstMAI	GTCTC	4 cut(s)	1811, 2586, 3451, 3513
BstMWI	GCNNNNNNNGC	3 cut(s)	556, 565, 3466
BstNI	CCWGG	2 cut(s)	1448, 1474
BstNSI	RCATGY	1 cut(s)	1148
BstPI	GGTNACC	2 cut(s)	988, 1908
BstSCI	CCNGG	2 cut(s)	1446, 1472
BstSFI	CTRYAG	1 cut(s)	2408
BstSLI	GKGCMC	3 cut(s)	874, 2298, 3217
BstV1I	GCAGC	4 cut(s)	27, 693, 1993, 3570
BstV2I	GAAGAC	2 cut(s)	617, 1078
BstX2I	RGATCY	3 cut(s)	1312, 1476, 2098
BstYI	RGATCY	3 cut(s)	1312, 1476, 2098
BsuI	GTATCC	2 cut(s)	1432, 2424
BsuRI	GGCC	7 cut(s)	377, 683, 1918, 1934, 2892, 2997, 3623
BtgI	CCRYGG	1 cut(s)	1282
BtsCI	GGATG	8 cut(s)	724, 1016, 1456, 1637, 1910, 2242, 2434, 3051
BtsI	GCAGTG	5 cut(s)	266, 575, 1824, 1983, 3342
BveI	ACCTGC	1 cut(s)	3362
Cac8I	GCNNGC	8 cut(s)	1146, 1222, 1279, 1879, 2083, 2211, 3234, 3462
CciI	TCATGA	3 cut(s)	1002, 2647, 2962
Cfr10I	RCCGGY	1 cut(s)	3121
Cfr13I	GGNCC	3 cut(s)	2821, 3119, 3304
Csp6I	GTAC	5 cut(s)	1456, 1496, 2070, 2780, 2830
CspAI	ACCGGT	1 cut(s)	3121
CviQI	GTAC	5 cut(s)	1456, 1496, 2070, 2780, 2830
DdeI	CTNAG	9 cut(s)	197, 858, 1164, 1967, 2315, 2654, 2844, 2923, 3424
DraI	TTTAAA	1 cut(s)	795
DrdI	GACNNNNNNGTC	1 cut(s)	3302
DriI	GACNNNNNGTC	2 cut(s)	2020, 3496
DseDI	GACNNNNNNGTC	1 cut(s)	3302
Eam1104I	CTCTTC	4 cut(s)	67, 928, 1306, 1364
Eam1105I	GACNNNNNGTC	2 cut(s)	2020, 3496
EarI	CTCTTC	4 cut(s)	67, 928, 1306, 1364
Ecl136II	GAGCTC	2 cut(s)	2653, 3454
Eco130I	CCWWGG	4 cut(s)	1282, 1653, 1913, 3618
Eco147I	AGGCCT	2 cut(s)	1934, 2997
Eco24I	GRGCYC	2 cut(s)	2655, 3456
Eco31I	GGTCTC	2 cut(s)	3451, 3513
Eco32I	GATATC	1 cut(s)	2004
Eco47I	GGWCC	3 cut(s)	2821, 3119, 3304
Eco53kI	GAGCTC	2 cut(s)	2653, 3454
Eco57I	CTGAAG	3 cut(s)	1287, 1388, 3176
Eco88I	CYCGRG	1 cut(s)	1533
Eco91I	GGTNACC	2 cut(s)	988, 1908
EcoICRI	GAGCTC	2 cut(s)	2653, 3454
EcoO65I	GGTNACC	2 cut(s)	988, 1908
EcoRII	CCWGG	2 cut(s)	1446, 1472
EcoRV	GATATC	1 cut(s)	2004
EcoT14I	CCWWGG	4 cut(s)	1282, 1653, 1913, 3618
EcoT22I	ATGCAT	3 cut(s)	906, 2356, 2608
EcoT38I	GRGCYC	2 cut(s)	2655, 3456
ErhI	CCWWGG	4 cut(s)	1282, 1653, 1913, 3618
FaqI	GGGAC	3 cut(s)	1195, 1599, 3308
FauI	CCCGC	1 cut(s)	195
FauNDI	CATATG	2 cut(s)	808, 2037
FblI	GTMKAC	3 cut(s)	56, 1199, 2935
Fnu4HI	GCNGC	4 cut(s)	41, 707, 1982, 3559
FokI	GGATG	8 cut(s)	731, 1023, 1463, 1624, 1917, 2249, 2421, 3058
FriOI	GRGCYC	2 cut(s)	2655, 3456
Fsp4HI	GCNGC	4 cut(s)	41, 707, 1982, 3559
FspBI	CTAG	9 cut(s)	285, 780, 1236, 1481, 1703, 2045, 2345, 3534, 3603
GluI	GCNGC	4 cut(s)	41, 707, 1982, 3559
GsaI	CCCAGC	3 cut(s)	248, 891, 1152
GsuI	CTGGAG	1 cut(s)	3248
HaeIII	GGCC	7 cut(s)	377, 683, 1918, 1934, 2892, 2997, 3623
HapII	CCGG	3 cut(s)	1579, 1919, 3122
HincII	GTYRAC	4 cut(s)	1200, 2485, 2936, 3079
HindII	GTYRAC	4 cut(s)	1200, 2485, 2936, 3079
HindIII	AAGCTT	2 cut(s)	1682, 3578
HpaI	GTTAAC	1 cut(s)	2485
HpaII	CCGG	3 cut(s)	1579, 1919, 3122
HphI	GGTGA	3 cut(s)	518, 1654, 3386
Hpy166II	GTNNAC	9 cut(s)	57, 1025, 1200, 2296, 2485, 2832, 2936, 3079, 3215
Hpy8I	GTNNAC	9 cut(s)	57, 1025, 1200, 2296, 2485, 2832, 2936, 3079, 3215
HpyCH4III	ACNGT	7 cut(s)	476, 2144, 2194, 2204, 2245, 3011, 3382
HpyF10VI	GCNNNNNNNGC	3 cut(s)	556, 565, 3466
HpyF3I	CTNAG	9 cut(s)	197, 858, 1164, 1967, 2315, 2654, 2844, 2923, 3424
KpnI	GGTACC	1 cut(s)	1499
KspAI	GTTAAC	1 cut(s)	2485
LguI	GCTCTTC	1 cut(s)	928
LmnI	GCTCC	6 cut(s)	211, 1014, 1867, 2230, 3229, 3451
Lsp1109I	GCAGC	4 cut(s)	27, 693, 1993, 3570
LweI	GCATC	6 cut(s)	271, 1646, 1807, 2431, 2667, 3246
MaeI	CTAG	9 cut(s)	285, 780, 1236, 1481, 1703, 2045, 2345, 3534, 3603
MbiI	CCGCTC	1 cut(s)	2728
MfeI	CAATTG	1 cut(s)	617
MflI	RGATCY	3 cut(s)	1312, 1476, 2098
MhlI	GDGCHC	5 cut(s)	874, 2298, 2655, 3217, 3456
MlyI	GAGTC	5 cut(s)	181, 305, 448, 2941, 3506
MmeI	TCCRAC	4 cut(s)	253, 939, 1638, 2562
Mph1103I	ATGCAT	3 cut(s)	906, 2356, 2608
MroXI	GAANNNNTTC	4 cut(s)	1995, 2533, 2997, 3033
MslI	CAYNNNNRTG	2 cut(s)	568, 2439
MspCI	CTTAAG	2 cut(s)	2017, 3272
MspI	CCGG	3 cut(s)	1579, 1919, 3122
MspR9I	CCNGG	2 cut(s)	1448, 1474
MunI	CAATTG	1 cut(s)	617
Mva1269I	GAATGC	4 cut(s)	904, 1532, 1879, 1995
MvaI	CCWGG	2 cut(s)	1448, 1474
MwoI	GCNNNNNNNGC	3 cut(s)	556, 565, 3466
NcoI	CCATGG	1 cut(s)	1282
NdeI	CATATG	2 cut(s)	808, 2037
NlaIV	GGNNCC	4 cut(s)	213, 1314, 1478, 1497
NmeAIII	GCCGAG	2 cut(s)	2842, 3277
NmuCI	GTSAC	4 cut(s)	1360, 3382, 3498, 3536
NsiI	ATGCAT	3 cut(s)	906, 2356, 2608
NspI	RCATGY	1 cut(s)	1148
NspV	TTCGAA	1 cut(s)	768
PaeI	GCATGC	1 cut(s)	1148
PagI	TCATGA	3 cut(s)	1002, 2647, 2962
PaqCI	CACCTGC	1 cut(s)	3362
PceI	AGGCCT	2 cut(s)	1934, 2997
PciSI	GCTCTTC	1 cut(s)	928
PctI	GAATGC	4 cut(s)	904, 1532, 1879, 1995
PdmI	GAANNNNTTC	4 cut(s)	1995, 2533, 2997, 3033
PfeI	GAWTC	9 cut(s)	146, 727, 1210, 1291, 1885, 2959, 2966, 3176, 3191
PinAI	ACCGGT	1 cut(s)	3121
PkrI	GCNGC	4 cut(s)	42, 708, 1983, 3560
PleI	GAGTC	5 cut(s)	181, 304, 447, 2940, 3505
PpsI	GAGTC	5 cut(s)	181, 304, 447, 2940, 3505
PshBI	ATTAAT	2 cut(s)	2357, 3411
PsiI	TTATAA	4 cut(s)	2139, 2454, 2885, 3222
Psp124BI	GAGCTC	2 cut(s)	2655, 3456
Psp6I	CCWGG	2 cut(s)	1446, 1472
PspEI	GGTNACC	2 cut(s)	988, 1908
PspFI	CCCAGC	3 cut(s)	244, 887, 1148
PspGI	CCWGG	2 cut(s)	1446, 1472
PspN4I	GGNNCC	4 cut(s)	213, 1314, 1478, 1497
PspPI	GGNCC	3 cut(s)	2821, 3119, 3304
PsuI	RGATCY	3 cut(s)	1312, 1476, 2098
RsaI	GTAC	5 cut(s)	1457, 1497, 2071, 2781, 2831
RsaNI	GTAC	5 cut(s)	1456, 1496, 2070, 2780, 2830
RseI	CAYNNNNRTG	2 cut(s)	568, 2439
SacI	GAGCTC	2 cut(s)	2655, 3456
SalI	GTCGAC	2 cut(s)	1198, 2934
SapI	GCTCTTC	1 cut(s)	928
SatI	GCNGC	4 cut(s)	41, 707, 1982, 3559
Sau96I	GGNCC	3 cut(s)	2821, 3119, 3304
SchI	GAGTC	5 cut(s)	181, 305, 448, 2941, 3506
ScrFI	CCNGG	2 cut(s)	1448, 1474
SduI	GDGCHC	5 cut(s)	874, 2298, 2655, 3217, 3456
SfaNI	GCATC	6 cut(s)	271, 1646, 1807, 2431, 2667, 3246
SfcI	CTRYAG	1 cut(s)	2408
SfuI	TTCGAA	1 cut(s)	768
SinI	GGWCC	3 cut(s)	2821, 3119, 3304
SmiMI	CAYNNNNRTG	2 cut(s)	568, 2439
SmlI	CTYRAG	4 cut(s)	1861, 2017, 2872, 3272
SmoI	CTYRAG	4 cut(s)	1861, 2017, 2872, 3272
SphI	GCATGC	1 cut(s)	1148
SseBI	AGGCCT	2 cut(s)	1934, 2997
SsiI	CCGC	5 cut(s)	202, 527, 2560, 2728, 2866
SspI	AATATT	1 cut(s)	2668
SspMI	CTAG	9 cut(s)	285, 780, 1236, 1481, 1703, 2045, 2345, 3534, 3603
SstI	GAGCTC	2 cut(s)	2655, 3456
StuI	AGGCCT	2 cut(s)	1934, 2997
StyD4I	CCNGG	2 cut(s)	1446, 1472
StyI	CCWWGG	4 cut(s)	1282, 1653, 1913, 3618
TaaI	ACNGT	7 cut(s)	476, 2144, 2194, 2204, 2245, 3011, 3382
TaqI	TCGA	6 cut(s)	538, 628, 768, 1199, 2794, 2935
TaqII	GACCGA	1 cut(s)	348
TatI	WGTACW	2 cut(s)	2779, 2829
TfiI	GAWTC	9 cut(s)	146, 727, 1210, 1291, 1885, 2959, 2966, 3176, 3191
TseFI	GTSAC	4 cut(s)	1360, 3382, 3498, 3536
TseI	GCWGC	4 cut(s)	40, 706, 1981, 3558
Tsp45I	GTSAC	4 cut(s)	1360, 3382, 3498, 3536
TspGWI	ACGGA	2 cut(s)	1415, 1917
Vha464I	CTTAAG	2 cut(s)	2017, 3272
VneI	GTGCAC	2 cut(s)	2294, 3213
VpaK11BI	GGWCC	3 cut(s)	2821, 3119, 3304
VspI	ATTAAT	2 cut(s)	2357, 3411
XapI	RAATTY	7 cut(s)	468, 1540, 2173, 2218, 2448, 3031, 3520
XbaI	TCTAGA	1 cut(s)	2344
XceI	RCATGY	1 cut(s)	1148
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1330
XmiI	GTMKAC	3 cut(s)	56, 1199, 2935
XmnI	GAANNNNTTC	4 cut(s)	1995, 2533, 2997, 3033
XspI	CTAG	9 cut(s)	285, 780, 1236, 1481, 1703, 2045, 2345, 3534, 3603
Zsp2I	ATGCAT	3 cut(s)	906, 2356, 2608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.