Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15280 |
| fragaria_vesca | FvH4_6g47953 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48150 FvH4_6g48880 FvH4_6g48880 |
| malus_domestica | MD09G1053400.v1.1 |
| prunus_persica | Prupe.3G265200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0167491 RchiOBHm_Chr2g0167571 RchiOBHm_Chr2g0167581 |
| rosa_laevigata | RLG00000021724 RLG00000021736 |
| rosa_multiflora | Rmu_sc0000056.1_g000010 Rmu_sc0000056.1_g000011 Rmu_sc0001970.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083370 Rroxscaffold_2G00083410 Rroxscaffold_2G00083440 |
| rosa_rugosa | Rorug02G0530600 |
| rosa_samantha | Rh2AG597900 Rh2AG598800 Rh2AG599200 Rh2AG599300 Rh2AG599400 Rh2BG609400 Rh2BG609800 Rh2BG609900 Rh2BG610000 Rh2CG580300 Rh2DG620700 Rh2DG621000 Rh2DG621100 Rh2DG621900 Rh2DG622000 Rh2DG622100 Rh2DG622600 Rh2DG622700 |
| rosa_wichuraiana | Rw2G049750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 451 |
| AcsI | RAATTY | 2 cut(s) | 91, 312 |
| AgsI | TTSAA | 2 cut(s) | 118, 325 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 219, 251 |
| AluBI | AGCT | 2 cut(s) | 198, 366 |
| AluI | AGCT | 2 cut(s) | 198, 366 |
| ApoI | RAATTY | 2 cut(s) | 91, 312 |
| BaeGI | GKGCMC | 1 cut(s) | 223 |
| BbsI | GAAGAC | 1 cut(s) | 427 |
| BccI | CCATC | 1 cut(s) | 62 |
| BpiI | GAAGAC | 1 cut(s) | 427 |
| BpmI | CTGGAG | 1 cut(s) | 382 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 355, 385, 456, 486 |
| BseGI | GGATG | 1 cut(s) | 73 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseSI | GKGCMC | 1 cut(s) | 223 |
| BseYI | CCCAGC | 1 cut(s) | 483 |
| BslFI | GGGAC | 1 cut(s) | 289 |
| BsmFI | GGGAC | 1 cut(s) | 289 |
| BsmI | GAATGC | 2 cut(s) | 34, 253 |
| Bsp1286I | GDGCHC | 1 cut(s) | 223 |
| BspACI | CCGC | 1 cut(s) | 451 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspHI | TCATGA | 2 cut(s) | 99, 351 |
| BspQI | GCTCTTC | 1 cut(s) | 277 |
| Bst6I | CTCTTC | 1 cut(s) | 277 |
| BstC8I | GCNNGC | 1 cut(s) | 481 |
| BstDEI | CTNAG | 2 cut(s) | 136, 207 |
| BstEII | GGTNACC | 1 cut(s) | 337 |
| BstF5I | GGATG | 1 cut(s) | 73 |
| BstNSI | RCATGY | 1 cut(s) | 483 |
| BstPI | GGTNACC | 1 cut(s) | 337 |
| BstSLI | GKGCMC | 1 cut(s) | 223 |
| BstV2I | GAAGAC | 1 cut(s) | 427 |
| BtsCI | GGATG | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 1 cut(s) | 481 |
| CciI | TCATGA | 2 cut(s) | 99, 351 |
| CviAII | CATG | 3 cut(s) | 100, 352, 480 |
| CviJI | RGCY | 8 cut(s) | 107, 113, 127, 198, 267, 321, 360, 366 |
| CviKI_1 | RGCY | 8 cut(s) | 107, 113, 127, 198, 267, 321, 360, 366 |
| DdeI | CTNAG | 2 cut(s) | 136, 207 |
| DraI | TTTAAA | 1 cut(s) | 144 |
| Eam1104I | CTCTTC | 1 cut(s) | 277 |
| EarI | CTCTTC | 1 cut(s) | 277 |
| Eco91I | GGTNACC | 1 cut(s) | 337 |
| EcoO65I | GGTNACC | 1 cut(s) | 337 |
| EcoT22I | ATGCAT | 1 cut(s) | 255 |
| FaeI | CATG | 3 cut(s) | 103, 355, 483 |
| FaqI | GGGAC | 1 cut(s) | 289 |
| FatI | CATG | 3 cut(s) | 99, 351, 479 |
| FauI | CCCGC | 1 cut(s) | 444 |
| FokI | GGATG | 1 cut(s) | 80 |
| GsaI | CCCAGC | 1 cut(s) | 487 |
| GsuI | CTGGAG | 1 cut(s) | 382 |
| Hin1II | CATG | 3 cut(s) | 103, 355, 483 |
| HinfI | GANTC | 3 cut(s) | 76, 179, 348 |
| Hpy166II | GTNNAC | 2 cut(s) | 374, 400 |
| Hpy188I | TCNGA | 2 cut(s) | 184, 409 |
| Hpy188III | TCNNGA | 5 cut(s) | 80, 100, 329, 352, 371 |
| Hpy8I | GTNNAC | 2 cut(s) | 374, 400 |
| HpyAV | CCTTC | 3 cut(s) | 97, 169, 482 |
| HpyCH4V | TGCA | 3 cut(s) | 63, 253, 301 |
| HpyF3I | CTNAG | 2 cut(s) | 136, 207 |
| Hsp92II | CATG | 3 cut(s) | 103, 355, 483 |
| LguI | GCTCTTC | 1 cut(s) | 277 |
| LmnI | GCTCC | 1 cut(s) | 363 |
| LpnPI | CCDG | 6 cut(s) | 49, 65, 237, 342, 346, 469 |
| MaeIII | GTNAC | 1 cut(s) | 337 |
| MboII | GAAGA | 4 cut(s) | 37, 184, 294, 432 |
| MhlI | GDGCHC | 1 cut(s) | 223 |
| MluCI | AATT | 2 cut(s) | 91, 312 |
| MlyI | GAGTC | 1 cut(s) | 173 |
| MnlI | CCTC | 4 cut(s) | 34, 76, 328, 458 |
| Mph1103I | ATGCAT | 1 cut(s) | 255 |
| MseI | TTAA | 3 cut(s) | 143, 213, 384 |
| MspA1I | CMGCKG | 1 cut(s) | 451 |
| Mva1269I | GAATGC | 2 cut(s) | 34, 253 |
| NlaIII | CATG | 3 cut(s) | 103, 355, 483 |
| NsiI | ATGCAT | 1 cut(s) | 255 |
| NspI | RCATGY | 1 cut(s) | 483 |
| PaeI | GCATGC | 1 cut(s) | 483 |
| PagI | TCATGA | 2 cut(s) | 99, 351 |
| PciSI | GCTCTTC | 1 cut(s) | 277 |
| PctI | GAATGC | 2 cut(s) | 34, 253 |
| PfeI | GAWTC | 2 cut(s) | 76, 348 |
| PleI | GAGTC | 1 cut(s) | 173 |
| PpsI | GAGTC | 1 cut(s) | 173 |
| PspEI | GGTNACC | 1 cut(s) | 337 |
| PspFI | CCCAGC | 1 cut(s) | 483 |
| SapI | GCTCTTC | 1 cut(s) | 277 |
| SaqAI | TTAA | 3 cut(s) | 143, 213, 384 |
| SchI | GAGTC | 1 cut(s) | 173 |
| SduI | GDGCHC | 1 cut(s) | 223 |
| SetI | ASST | 8 cut(s) | 200, 295, 339, 344, 368, 405, 429, 493 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| SphI | GCATGC | 1 cut(s) | 483 |
| Sse9I | AATT | 2 cut(s) | 91, 312 |
| SsiI | CCGC | 1 cut(s) | 451 |
| TasI | AATT | 2 cut(s) | 91, 312 |
| TfiI | GAWTC | 2 cut(s) | 76, 348 |
| Tru1I | TTAA | 3 cut(s) | 143, 213, 384 |
| Tru9I | TTAA | 3 cut(s) | 143, 213, 384 |
| TspDTI | ATGAA | 3 cut(s) | 38, 116, 162 |
| XapI | RAATTY | 2 cut(s) | 91, 312 |
| XceI | RCATGY | 1 cut(s) | 483 |
| Zsp2I | ATGCAT | 1 cut(s) | 255 |