AT5G23490

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0001142
Physical Location & Seq
Forward (+)
7919377 .. 7926738
7362 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G23490.3

Sequence Viewer

Length: 2190 bp
ATGGAGAATGGCCATGAGGAAAGATTGGCGGAGAGATTTTCCGGATTGGGTTTCGAAGATTCTTCTCTTTTGCCTGAGAACGAGTTTAAGAACGACAACTTGTTTCAGGTCATCAAAGCTGTTGAAGCAGCAGAAACCACCATCAAGGAGCAGGTGGAAGAGAATAGCCGATTAAAAGCTGAACTTCAGCGAAGTGCTCTGGAATTGGCTAAATATAAATCAGATGAATCCTTGCCCCAAACTTCTAATATCGGAGATCACACAAATTCTACCACTGTGTCCCGCCTGGTTCACCAGCCAGTTGACTGGAAGCCAGTTGTGATCAAAGCTTCAGATGCTGATTCATCAGGCTTGCTGGTTGTTCACCCCCATGTGAATGCTAATGGTGAAGAAGCTACTGTGAGTAATCGTTTTGAAAGCCATTCTGAAGAAACTATAAGTAATGGCACTGTTAAAAGAGCTATAGATGGTACTGGTCCCTCTCAATTCGATTCGTCAATATCTCCTATGAGAATGCGATTGGAGGGAGAGCATGACGCACACTTCAGTTCGTCTACTCATGGATCTATGCCAGTTGGTGAAGTAAATCATTCAGGCAATGCATGGAAGCAGGACCTCATTCACAAGGTCCAGGAGCAGGAACAAGAAATTTCGCAGTTGAGAAGATATCTTACTGACTGTTCTGTTAAGGAAGCCCAAATTCGCAATGAAAAATATGTTCTGGAAAAGAGAATTGCCTACATGCGTCTGGCATTTGATCAACAGCAACAAGATCTTGTTGATGCTTCATCAAAAGCTCTCTCTTACAGACAAGAGATAATTGAAGAAAATATACGCCTAACATATGCCTTACAGGCTACACAGCAAGAAAGATCTACATTTGTATCATACTTGTTACCTCTTTTATCAGAGTATTCTCTGCAACCACAGGTTTCTGATGCTCAGTCTATTGTCAGCAATGTGAAGGTTTTGTTTAAGCATCTACAAGAAAAGCTCCTTCTTACTGAGACAAAGTTGAAGGAGTCGGAATATCAGTTAGCACCATGGCAGTCAGATGTGAACCACTCAAATGATTCCCCTTTGGCTCCATCGCGCTCAGCTGGTGTGGCATTAACCCACTCCACAAAAGATTCCATGTATTCTCATGATCACACAGCCATAGACTGGAATTTGGAGCGCCAGCAGCAAGATGAGCCAGGTAGCTCAGCTGTGAGGAATTACCATCTTGATGATTCTAGTACGTTTTCACCTCTTGAAAACAGTCAGTCGGCAGCCTTTGAGATGCATGTGCAACCAGGTACCAGCGTGGACGAATCTCCTGCTCATAAGAAAGTAGACGAAACTCCACCTAAGCATGTCCAGTTTCTTGAGCCTATCAGCAAGACGGTGGTCGACGATGCTCAAAATCCATCATATGGGTCTGCGTTTGATGACCCAAGCTCCTCAAATTCTCCTCTTTTGTCCCCAGTTTTTGAAGAACCTTCTTCCTCCTTTTCTGAGGGTGGAGATGATGACCCGTTACCAGGTATAGAGGACCTCCAAATTTCAGGAGAACCTTATCCTGGACATGAACTTCAGGCTTGTGGTTACTCCATTAATGGAACAACAAGTTGTAATTTTGAGTGGGTCTGTCACCTAGAAGATGGATCTGTGAATTACATTGATGGAGCAAAGCAGCCAAATTACCTTGTCACTGCTGATGATGTTGATTTATATCTTGCTATTGAGGTTCAGCCTTTGGATGACAGGAACCGAAAGGGGGAGCTTGTGAAGGTTTTTGCCAATGATAACCGCAAGATTGCTTGCCATCCAGATATGCAGAGCAATATAGAGAAGACTCTTCATACTGGTCATGCTTCATACAAAGTTTCTCTTGCGGTTGGCTTCGTGGATATATGGGAAGCAGCAACATTATCTATTAAGAGAGAAGGTTACAGCATCAAGTGTATTAGTGATCTCACAATTGCAGAAAAGTTCTCAGCATCTACTACTGTAACCATTCCGTTTGGGCAACCGGCAGAACTTGTTATCATTGGTTCTGATGGTAGTGAACATTCCTTACGAGCAGATAATGGATCGCCAGACCTTATCGGCTCAAGAGATGAAATAGTACTCACCCTGAGATTATTTATCAAGAGGGCTCTGCAGAGGAAGAAGGGAAAGAAGAGAGTATTTTTGTTTAACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

729

Amino Acids

81.11

Weight (kDa)

5.03

Isoelectric Point (pI)

53.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IG_AIR9 PF23197 510 - 592 3.6e-06 AIR9 A9 domain
DUF7046 PF23080 601 - 628 6.8e-07 Domain of unknown function (DUF7046)
DUF7046 PF23080 627 - 695 1.3e-24 Domain of unknown function (DUF7046)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 142
Acc36I ACCTGC 1 cut(s) 142
Acc65I GGTACC 1 cut(s) 1298
AccB1I GGYRCC 1 cut(s) 1298
AccB7I CCANNNNNTGG 2 cut(s) 1164, 1415
AccI GTMKAC 3 cut(s) 554, 1335, 1392
AccII CGCG 1 cut(s) 1093
AccIII TCCGGA 1 cut(s) 41
AciI CCGC 4 cut(s) 29, 283, 1792, 1877
AclWI GGATC 3 cut(s) 571, 1654, 2083
AcoI YGGCCR 1 cut(s) 10
AcsI RAATTY 6 cut(s) 265, 648, 699, 1168, 1447, 1542
AcuI CTGAAG 5 cut(s) 170, 315, 447, 529, 1559
AfaI GTAC 4 cut(s) 472, 1240, 1300, 2112
AfiI CCNNNNNNNGG 6 cut(s) 637, 1164, 1415, 1523, 1562, 1759
AgsI TTSAA 6 cut(s) 125, 416, 824, 1018, 1256, 1475
AjnI CCWGG 6 cut(s) 285, 630, 1195, 1294, 1522, 1561
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 1 cut(s) 1001
AlwI GGATC 3 cut(s) 571, 1654, 2083
AlwNI CAGNNNCTG 1 cut(s) 338
Aor13HI TCCGGA 1 cut(s) 41
AoxI GGCC 1 cut(s) 10
ApeKI GCWGC 5 cut(s) 128, 1183, 1271, 1675, 1904
ApoI RAATTY 6 cut(s) 265, 648, 699, 1168, 1447, 1542
AseI ATTAAT 1 cut(s) 1596
Asp718I GGTACC 1 cut(s) 1298
AspLEI GCGC 2 cut(s) 1095, 1179
AspS9I GGNCC 4 cut(s) 476, 613, 628, 1534
AsuHPI GGTGA 7 cut(s) 284, 356, 398, 590, 1239, 1625, 2107
AsuII TTCGAA 1 cut(s) 54
AvaII GGWCC 4 cut(s) 476, 613, 628, 1534
BaeI ACNNNNGTAYC 4 cut(s) 867, 900, 1290, 1323
BalI TGGCCA 1 cut(s) 12
BanI GGYRCC 1 cut(s) 1298
BanII GRGCYC 1 cut(s) 2143
BarI GAAGNNNNNNTAC 4 cut(s) 655, 687, 816, 848
BbsI GAAGAC 1 cut(s) 1841
Bbv12I GWGCWC 1 cut(s) 199
BbvI GCAGC 5 cut(s) 140, 1195, 1283, 1687, 1916
BccI CCATC 9 cut(s) 149, 461, 1096, 1230, 1417, 1637, 1658, 1815, 2036
BcgI CGANNNNNNTGC 2 cut(s) 1301, 1335
BciT130I CCWGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
BclI TGATCA 3 cut(s) 321, 757, 1147
BcoDI GTCTC 1 cut(s) 1001
BfaI CTAG 2 cut(s) 1236, 1637
BfmI CTRYAG 2 cut(s) 462, 2144
BfoI RGCGCY 1 cut(s) 1180
BfuAI ACCTGC 1 cut(s) 142
BglI GCCNNNNNGGC 1 cut(s) 854
BglII AGATCT 2 cut(s) 772, 872
BisI GCNGC 5 cut(s) 129, 1184, 1272, 1676, 1905
BlpI GCTNAGC 2 cut(s) 1096, 1204
BlsI GCNGC 5 cut(s) 130, 1185, 1273, 1677, 1906
BmcAI AGTACT 1 cut(s) 2112
Bme1390I CCNGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
Bme18I GGWCC 4 cut(s) 476, 613, 628, 1534
BmgT120I GGNCC 4 cut(s) 476, 613, 628, 1534
BmiI GGNNCC 4 cut(s) 478, 1086, 1300, 1751
BmrFI CCNGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
BmrI ACTGGG 1 cut(s) 1460
BmsI GCATC 8 cut(s) 325, 772, 928, 988, 1272, 1387, 1947, 1991
BmuI ACTGGG 1 cut(s) 1460
BoxI GACNNNNGTC 1 cut(s) 1388
BpiI GAAGAC 1 cut(s) 1841
Bpu10I CCTNAGC 1 cut(s) 1350
Bpu1102I GCTNAGC 2 cut(s) 1096, 1204
Bpu14I TTCGAA 1 cut(s) 54
BpuEI CTTGAG 2 cut(s) 1388, 2080
BsaBI GATNNNNATC 1 cut(s) 1713
BsaJI CCNNGG 1 cut(s) 1043
BsaWI WCCGGW 1 cut(s) 41
BsaXI ACNNNNNCTCC 2 cut(s) 1424, 1454
Bsc4I CCNNNNNNNGG 6 cut(s) 637, 1164, 1415, 1523, 1562, 1759
Bse118I RCCGGY 1 cut(s) 2014
Bse1I ACTGG 9 cut(s) 299, 311, 314, 478, 572, 1169, 1360, 1466, 1852
Bse3DI GCAATG 3 cut(s) 604, 712, 964
Bse8I GATNNNNATC 1 cut(s) 1713
BseAI TCCGGA 1 cut(s) 41
BseBI CCWGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
BseDI CCNNGG 1 cut(s) 1043
BseGI GGATG 2 cut(s) 1747, 1807
BseJI GATNNNNATC 1 cut(s) 1713
BseLI CCNNNNNNNGG 6 cut(s) 637, 1164, 1415, 1523, 1562, 1759
BseMI GCAATG 3 cut(s) 604, 712, 964
BseMII CTCAG 8 cut(s) 66, 956, 996, 1110, 1218, 1488, 1992, 2111
BseNI ACTGG 9 cut(s) 299, 311, 314, 478, 572, 1169, 1360, 1466, 1852
BseRI GAGGAG 2 cut(s) 1432, 1443
BseXI GCAGC 5 cut(s) 140, 1195, 1283, 1687, 1916
Bsh1236I CGCG 1 cut(s) 1093
BshFI GGCC 1 cut(s) 12
BshNI GGYRCC 1 cut(s) 1298
BsiHKAI GWGCWC 1 cut(s) 199
BsiSI CCGG 2 cut(s) 42, 2015
BslFI GGGAC 3 cut(s) 265, 462, 1447
BslI CCNNNNNNNGG 6 cut(s) 637, 1164, 1415, 1523, 1562, 1759
BsmAI GTCTC 1 cut(s) 1001
BsmFI GGGAC 3 cut(s) 265, 462, 1447
BsmI GAATGC 2 cut(s) 382, 519
BsnI GGCC 1 cut(s) 12
Bsp119I TTCGAA 1 cut(s) 54
Bsp1286I GDGCHC 2 cut(s) 199, 2143
Bsp13I TCCGGA 1 cut(s) 41
Bsp1720I GCTNAGC 2 cut(s) 1096, 1204
Bsp19I CCATGG 1 cut(s) 1043
BspACI CCGC 4 cut(s) 29, 283, 1792, 1877
BspANI GGCC 1 cut(s) 12
BspCNI CTCAG 8 cut(s) 67, 955, 997, 1109, 1217, 1489, 1991, 2112
BspEI TCCGGA 1 cut(s) 41
BspFNI CGCG 1 cut(s) 1093
BspHI TCATGA 1 cut(s) 1144
BspLI GGNNCC 4 cut(s) 478, 1086, 1300, 1751
BspMAI CTGCAG 1 cut(s) 2148
BspMI ACCTGC 1 cut(s) 142
BspPI GGATC 3 cut(s) 571, 1654, 2083
BspT104I TTCGAA 1 cut(s) 54
BspT107I GGYRCC 1 cut(s) 1298
BsrDI GCAATG 3 cut(s) 604, 712, 964
BsrFI RCCGGY 1 cut(s) 2014
BsrI ACTGG 9 cut(s) 299, 311, 314, 478, 572, 1169, 1360, 1466, 1852
BssAI RCCGGY 1 cut(s) 2014
BssECI CCNNGG 1 cut(s) 1043
BssT1I CCWWGG 1 cut(s) 1043
Bst2UI CCWGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
Bst4CI ACNGT 7 cut(s) 277, 400, 451, 680, 1262, 1387, 1993
Bst6I CTCTTC 3 cut(s) 153, 1845, 2159
BstBI TTCGAA 1 cut(s) 54
BstC8I GCNNGC 3 cut(s) 353, 1181, 1804
BstDEI CTNAG 9 cut(s) 75, 942, 1005, 1096, 1204, 1350, 1497, 1978, 2120
BstDSI CCRYGG 1 cut(s) 1043
BstF5I GGATG 2 cut(s) 1747, 1807
BstFNI CGCG 1 cut(s) 1093
BstH2I RGCGCY 1 cut(s) 1180
BstHHI GCGC 2 cut(s) 1095, 1179
BstMAI GTCTC 1 cut(s) 1001
BstMWI GCNNNNNNNGC 6 cut(s) 125, 335, 854, 1106, 1183, 1192
BstNI CCWGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
BstNSI RCATGY 3 cut(s) 745, 1289, 1358
BstPAI GACNNNNGTC 1 cut(s) 1388
BstSCI CCNGG 6 cut(s) 285, 630, 1195, 1294, 1522, 1561
BstSFI CTRYAG 2 cut(s) 462, 2144
BstUI CGCG 1 cut(s) 1093
BstV1I GCAGC 5 cut(s) 140, 1195, 1283, 1687, 1916
BstV2I GAAGAC 1 cut(s) 1841
BstX2I RGATCY 4 cut(s) 563, 772, 872, 1646
BstXI CCANNNNNNTGG 1 cut(s) 306
BstYI RGATCY 4 cut(s) 563, 772, 872, 1646
BsuRI GGCC 1 cut(s) 12
BtgI CCRYGG 1 cut(s) 1043
BtgZI GCGATG 1 cut(s) 1074
BtsCI GGATG 2 cut(s) 1747, 1807
BtsI GCAGTG 1 cut(s) 1692
BtsIMutI CAGTG 3 cut(s) 273, 447, 1692
BveI ACCTGC 1 cut(s) 142
Cac8I GCNNGC 3 cut(s) 353, 1181, 1804
CaiI CAGNNNCTG 1 cut(s) 338
CciI TCATGA 1 cut(s) 1144
CfoI GCGC 2 cut(s) 1095, 1179
Cfr10I RCCGGY 1 cut(s) 2014
Cfr13I GGNCC 4 cut(s) 476, 613, 628, 1534
CseI GACGC 2 cut(s) 545, 734
CsiI ACCWGGT 2 cut(s) 1294, 1522
Csp6I GTAC 4 cut(s) 471, 1239, 1299, 2111
CviQI GTAC 4 cut(s) 471, 1239, 1299, 2111
DdeI CTNAG 9 cut(s) 75, 942, 1005, 1096, 1204, 1350, 1497, 1978, 2120
EaeI YGGCCR 1 cut(s) 10
Eam1104I CTCTTC 3 cut(s) 153, 1845, 2159
EarI CTCTTC 3 cut(s) 153, 1845, 2159
EciI GGCGGA 1 cut(s) 44
Eco130I CCWWGG 1 cut(s) 1043
Eco24I GRGCYC 1 cut(s) 2143
Eco32I GATATC 1 cut(s) 668
Eco47I GGWCC 4 cut(s) 476, 613, 628, 1534
Eco57I CTGAAG 5 cut(s) 170, 315, 447, 529, 1559
EcoO109I RGGNCCY 2 cut(s) 613, 1534
EcoRII CCWGG 6 cut(s) 285, 630, 1195, 1294, 1522, 1561
EcoRV GATATC 1 cut(s) 668
EcoT14I CCWWGG 1 cut(s) 1043
EcoT22I ATGCAT 2 cut(s) 604, 1287
EcoT38I GRGCYC 1 cut(s) 2143
ErhI CCWWGG 1 cut(s) 1043
FalI AAGNNNNNCTT 4 cut(s) 168, 200, 1857, 1889
FaqI GGGAC 3 cut(s) 265, 462, 1447
FauI CCCGC 1 cut(s) 290
FauNDI CATATG 2 cut(s) 844, 1414
FbaI TGATCA 3 cut(s) 321, 757, 1147
FblI GTMKAC 3 cut(s) 554, 1335, 1392
Fnu4HI GCNGC 5 cut(s) 129, 1184, 1272, 1676, 1905
FokI GGATG 2 cut(s) 1754, 1794
FriOI GRGCYC 1 cut(s) 2143
Fsp4HI GCNGC 5 cut(s) 129, 1184, 1272, 1676, 1905
FspBI CTAG 2 cut(s) 1236, 1637
GlaI GCGC 2 cut(s) 1094, 1178
GluI GCNGC 5 cut(s) 129, 1184, 1272, 1676, 1905
HaeII RGCGCY 1 cut(s) 1180
HaeIII GGCC 1 cut(s) 12
HapII CCGG 2 cut(s) 42, 2015
HgaI GACGC 2 cut(s) 545, 734
HhaI GCGC 2 cut(s) 1095, 1179
Hin6I GCGC 2 cut(s) 1093, 1177
HinP1I GCGC 2 cut(s) 1093, 1177
HincII GTYRAC 2 cut(s) 304, 1393
HindII GTYRAC 2 cut(s) 304, 1393
HindIII AAGCTT 1 cut(s) 327
HpaII CCGG 2 cut(s) 42, 2015
HphI GGTGA 7 cut(s) 284, 356, 398, 590, 1239, 1625, 2107
Hpy166II GTNNAC 9 cut(s) 292, 304, 364, 555, 1060, 1309, 1336, 1393, 2051
Hpy8I GTNNAC 9 cut(s) 292, 304, 364, 555, 1060, 1309, 1336, 1393, 2051
Hpy99I CGWCG 1 cut(s) 1397
HpyAV CCTTC 7 cut(s) 958, 1007, 1012, 1491, 1765, 1922, 2149
HpyCH4III ACNGT 7 cut(s) 277, 400, 451, 680, 1262, 1387, 1993
HpyCH4IV ACGT 1 cut(s) 1241
HpyCH4V TGCA 7 cut(s) 602, 922, 1285, 1291, 1819, 1967, 2146
HpyF10VI GCNNNNNNNGC 6 cut(s) 125, 335, 854, 1106, 1183, 1192
HpyF3I CTNAG 9 cut(s) 75, 942, 1005, 1096, 1204, 1350, 1497, 1978, 2120
HpySE526I ACGT 1 cut(s) 1241
HspAI GCGC 2 cut(s) 1093, 1177
Kpn2I TCCGGA 1 cut(s) 41
KpnI GGTACC 1 cut(s) 1302
Ksp22I TGATCA 3 cut(s) 321, 757, 1147
LmnI GCTCC 8 cut(s) 148, 634, 999, 1090, 1174, 1445, 1667, 1762
Lsp1109I GCAGC 5 cut(s) 140, 1195, 1283, 1687, 1916
LweI GCATC 8 cut(s) 325, 772, 928, 988, 1272, 1387, 1947, 1991
MabI ACCWGGT 2 cut(s) 1294, 1522
MaeI CTAG 2 cut(s) 1236, 1637
MaeII ACGT 1 cut(s) 1241
MaeIII GTNAC 7 cut(s) 894, 1518, 1586, 1631, 1690, 1931, 1993
MfeI CAATTG 1 cut(s) 1962
MflI RGATCY 4 cut(s) 563, 772, 872, 1646
MhlI GDGCHC 2 cut(s) 199, 2143
MlsI TGGCCA 1 cut(s) 12
MluNI TGGCCA 1 cut(s) 12
MlyI GAGTC 2 cut(s) 1031, 1831
MmeI TCCRAC 1 cut(s) 1005
Mox20I TGGCCA 1 cut(s) 12
Mph1103I ATGCAT 2 cut(s) 604, 1287
MroI TCCGGA 1 cut(s) 41
MscI TGGCCA 1 cut(s) 12
MseI TTAA 9 cut(s) 87, 173, 453, 687, 975, 1112, 1596, 1920, 2181
MslI CAYNNNNRTG 4 cut(s) 369, 375, 1068, 1227
Msp20I TGGCCA 1 cut(s) 12
MspA1I CMGCKG 2 cut(s) 1100, 1208
MspI CCGG 2 cut(s) 42, 2015
MspR9I CCNGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
MunI CAATTG 1 cut(s) 1962
Mva1269I GAATGC 2 cut(s) 382, 519
MvaI CCWGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
MvnI CGCG 1 cut(s) 1093
MwoI GCNNNNNNNGC 6 cut(s) 125, 335, 854, 1106, 1183, 1192
NcoI CCATGG 1 cut(s) 1043
NdeI CATATG 2 cut(s) 844, 1414
NlaIV GGNNCC 4 cut(s) 478, 1086, 1300, 1751
NmuCI GTSAC 2 cut(s) 1631, 1690
NsiI ATGCAT 2 cut(s) 604, 1287
NspI RCATGY 3 cut(s) 745, 1289, 1358
NspV TTCGAA 1 cut(s) 54
PagI TCATGA 1 cut(s) 1144
PaqCI CACCTGC 1 cut(s) 142
PctI GAATGC 2 cut(s) 382, 519
PfeI GAWTC 8 cut(s) 59, 227, 341, 491, 1073, 1130, 1232, 1313
PflMI CCANNNNNTGG 2 cut(s) 1164, 1415
PfoI TCCNGGA 2 cut(s) 630, 1561
PkrI GCNGC 5 cut(s) 130, 1185, 1273, 1677, 1906
PleI GAGTC 2 cut(s) 1030, 1831
PpsI GAGTC 2 cut(s) 1030, 1831
PpuMI RGGWCCY 2 cut(s) 613, 1534
PshAI GACNNNNGTC 1 cut(s) 1388
PshBI ATTAAT 1 cut(s) 1596
Psp5II RGGWCCY 2 cut(s) 613, 1534
Psp6I CCWGG 6 cut(s) 285, 630, 1195, 1294, 1522, 1561
PspGI CCWGG 6 cut(s) 285, 630, 1195, 1294, 1522, 1561
PspN4I GGNNCC 4 cut(s) 478, 1086, 1300, 1751
PspPI GGNCC 4 cut(s) 476, 613, 628, 1534
PspPPI RGGWCCY 2 cut(s) 613, 1534
PsrI GAACNNNNNNTAC 2 cut(s) 2043, 2075
PstI CTGCAG 1 cut(s) 2148
PstNI CAGNNNCTG 1 cut(s) 338
PsuI RGATCY 4 cut(s) 563, 772, 872, 1646
PvuII CAGCTG 2 cut(s) 1100, 1208
RsaI GTAC 4 cut(s) 472, 1240, 1300, 2112
RsaNI GTAC 4 cut(s) 471, 1239, 1299, 2111
RseI CAYNNNNRTG 4 cut(s) 369, 375, 1068, 1227
SalI GTCGAC 1 cut(s) 1391
SaqAI TTAA 9 cut(s) 87, 173, 453, 687, 975, 1112, 1596, 1920, 2181
SatI GCNGC 5 cut(s) 129, 1184, 1272, 1676, 1905
Sau96I GGNCC 4 cut(s) 476, 613, 628, 1534
ScaI AGTACT 1 cut(s) 2112
SchI GAGTC 2 cut(s) 1031, 1831
ScrFI CCNGG 6 cut(s) 287, 632, 1197, 1296, 1524, 1563
SduI GDGCHC 2 cut(s) 199, 2143
SexAI ACCWGGT 2 cut(s) 1294, 1522
SfaNI GCATC 8 cut(s) 325, 772, 928, 988, 1272, 1387, 1947, 1991
SfcI CTRYAG 2 cut(s) 462, 2144
SfuI TTCGAA 1 cut(s) 54
SinI GGWCC 4 cut(s) 476, 613, 628, 1534
SmiMI CAYNNNNRTG 4 cut(s) 369, 375, 1068, 1227
SmlI CTYRAG 2 cut(s) 1367, 2095
SmoI CTYRAG 2 cut(s) 1367, 2095
SsiI CCGC 4 cut(s) 29, 283, 1792, 1877
SspMI CTAG 2 cut(s) 1236, 1637
StyD4I CCNGG 6 cut(s) 285, 630, 1195, 1294, 1522, 1561
StyI CCWWGG 1 cut(s) 1043
TaaI ACNGT 7 cut(s) 277, 400, 451, 680, 1262, 1387, 1993
TaiI ACGT 1 cut(s) 1244
TaqI TCGA 3 cut(s) 54, 489, 1392
TatI WGTACW 1 cut(s) 2110
TfiI GAWTC 8 cut(s) 59, 227, 341, 491, 1073, 1130, 1232, 1313
Tru1I TTAA 9 cut(s) 87, 173, 453, 687, 975, 1112, 1596, 1920, 2181
Tru9I TTAA 9 cut(s) 87, 173, 453, 687, 975, 1112, 1596, 1920, 2181
TscAI CASTG 3 cut(s) 280, 454, 1699
TseFI GTSAC 2 cut(s) 1631, 1690
TseI GCWGC 5 cut(s) 128, 1183, 1271, 1675, 1904
Tsp45I GTSAC 2 cut(s) 1631, 1690
TspDTI ATGAA 8 cut(s) 240, 333, 723, 777, 1584, 1832, 1848, 2118
TspGWI ACGGA 1 cut(s) 1992
TspRI CASTG 3 cut(s) 280, 454, 1699
Van91I CCANNNNNTGG 2 cut(s) 1164, 1415
VpaK11BI GGWCC 4 cut(s) 476, 613, 628, 1534
VspI ATTAAT 1 cut(s) 1596
XapI RAATTY 6 cut(s) 265, 648, 699, 1168, 1447, 1542
XceI RCATGY 3 cut(s) 745, 1289, 1358
XmiI GTMKAC 3 cut(s) 554, 1335, 1392
XspI CTAG 2 cut(s) 1236, 1637
ZrmI AGTACT 1 cut(s) 2112
Zsp2I ATGCAT 2 cut(s) 604, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.