Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001142

Physical Location & Seq

Genomic Coordinates Reverse (-)

31830035 .. 31832119

Gene Structure 2085 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG250300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGAGAACGGACTCGATTGGAGAATTGCGGAGAAATTTTCAGGGTTGACGAGGACTTCCAGCCCTGATCCTAGTCGGTCCTCCGAAACAGACGACATTGGCTTGTTCCAGGTCATGAAGGCCGTTGAAGCTGCCGAGGCCACCATCAAGAGACAGGTCGAGGAGAACCTCCGCTTGAGGTCTGAGCTCGAATACAAGACTCTCGAGCTCCACAGACGTAAACAACTCCACGAACTATCATCGATGGCGCCGCGGTCGTCTCTCGATCTGGTAGGATCGGCTCGTCCGGAAGTGAACAATTCAGGAGATAATCAACAAGCTAGGGCGCCCAATTCCGATAATGGGGGATACAGCACGGAAGGGGAATATTATGATCCGCCGCGGGTGAATTCCGGGGAAGGGTTGATGCGATTGGATCATCCCAGCGAGAAGAATCTTGTGATCAAGATTCATGAAAATGAGCAGGAGATCATGCAATTGCGGAAGCAGCTGGGGGATTACTCGATGAAAGAAGCACAGATTCGGAACGAAAAGCATGTTCTCGAGGGTCGCATTGCTTATATGCGTTTGGTATTTGATCAGCAGCAGCAGGATCTTGCTGATGCTGCTTCCAAGGCTCTGGTGTACAGGCAAGATATAATTGAGGAGAACATACGGCTGGCTTATGCTTTGCAGGATGTGCAGCAGGAGAGGACGACAGTCGAAATTGAAGCAGTTTCAGTATCAACATTGGAAATTTCCAACAAAGATAGGCTTGAAATGGTTACTCACCCGCCATCTTCCCATGAGAAAGTACCGGCTTCTCCTCCTCCTGGTGCTCAGATGCAGACAACCGCCCCGAATTGGGATCAATCGGGTGGCCCTCGGAGCGGTTCTGGTGGTGTTGACACAGGGAATATTGAACACAGTGAACCTCAAAACAGGAACTCTGTAACCCCAGCTGTACCTGCTAAGCCTACTATTGCTAGACTTGATGCAAATCGATATAGAGACGATACAACACCCGGAAAACAGGTCAAGTTTCGTGAGCCTGAGATGCAAGCACACACAGATTATGATGATCATGACGAGGGATACAATGAGAGTGGAGGAACCTCTCCTTACACCGATCCCAGCTCCTCCTCTTATCCTCGGTATCTATCACCGGTTCATGAAGATCTGTTTTTAGATGAGGATGATCCATTACCAGCCATTGAGGGCCTCCAGATTTCAGGTGAAGCATTACCGGGACATGAGCTCCAAGCATCTGGATACTCCATTAATGGAACAACCAGTTGCAACTTTGAGTGGGTACGCCACCTTCCAGATGGATCAGTTAACTACATTGAAGGAGCAAAGCAACCCAACTATCTTCTCACTGCTGATGATGTCGATACATACCTTGCTATCGAAGTTCAACCCCTGGATAACAGGAAGCGAAAGGGAGAGCTCGTGAAGGTGTTTGCAAACTATCACAAGAAGATCACTTGTGAGCCCGAAATGCAAAGCCAGATACAGAAGATTCTTCAGAAGGGTCATGGATCATTTAAGGTGTTTGAGAACACTGGGTTTCTTGACATATGGGAACCTGCCACTTTGGCCATTAAGAGGGGAGCTTACAGCATTAAGCGCAGCTCTGAACCTAGTGTTGGTGGAGTTGTGGTGGCTGAGAAGTTTTCGCCCAACACAATCGTTTCGATTCCTTACGGAAGCCCTTCGGAATTCATCATCACCGATTCTGATATTGCTGGTGCTGGTGCTGATGCTGATCATGTTTTGAAAACAGACGATGCTAGCTGTTCTAGAGATACACTTGTGCTCATATTGAGATTATTTATCGTAAGGGCTGTTGAGAGAAGAACAAGGAAAGGGAAAAAAAGGGTCTTATTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

624

Amino Acids

69.58

Weight (kDa)

5.22

Isoelectric Point (pI)

51.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IG_AIR9	PF23197	399 - 480	9.3e-08	AIR9 A9 domain
DUF7046	PF23080	513 - 617	2.3e-27	Domain of unknown function (DUF7046)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08440 AT5G08440 AT5G08440 AT5G23490 AT5G23490 AT5G23490 AT5G23490 AT5G23510 AT5G23510 AT5G23510
fragaria_vesca	FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_3g21410 FvH4_7g23540
malus_domestica	MD03G1185400.v1.1 MD04G1186900.v1.1 MD11G1230900.v1.1
prunus_persica	Prupe.4G196300_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1
pyrus_communis	pycom03g16520 pycom03g16530
rosa_chinensis	RchiOBHm_Chr1g0368691 RchiOBHm_Chr3g0485101 RchiOBHm_Chr5g0036791
rosa_laevigata	RLG00000023166 RLG00000027197 RLG00000033721
rosa_multiflora	Rmu_co8159396.1_g000001 Rmu_sc0000399.1_g000002 Rmu_sc0006040.1_g000006 Rmu_sc0006040.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044160 Rroxscaffold_4G00288350 Rroxscaffold_6G00397190
rosa_rugosa	Rorug01G0343700 Rorug03G0216200 Rorug03G0216300
rosa_samantha	Rh3AG266300 Rh3BG301700 Rh3CG300000 Rh3DG295800 Rh5AG250300 Rh5BG252000 Rh5CG284000 Rh5DG260300
rosa_wichuraiana	Rw5G023020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	955, 1576
AccB1I	GGYRCC	2 cut(s)	247, 325
AccBSI	CCGCTC	1 cut(s)	870
AccII	CGCG	2 cut(s)	253, 382
AccIII	TCCGGA	1 cut(s)	286
AcoI	YGGCCR	1 cut(s)	1578
AcsI	RAATTY	4 cut(s)	35, 388, 735, 1700
AcuI	CTGAAG	1 cut(s)	1490
AcyI	GRCGYC	2 cut(s)	248, 326
AfaI	GTAC	4 cut(s)	626, 795, 945, 1293
AfiI	CCNNNNNNNGG	8 cut(s)	342, 399, 812, 843, 844, 869, 1587, 1628
AgeI	ACCGGT	1 cut(s)	1144
AgsI	TTSAA	7 cut(s)	128, 710, 758, 902, 1328, 1397, 1759
AjnI	CCWGG	3 cut(s)	108, 811, 1401
AjuI	GAANNNNNNNTTGG	2 cut(s)	1611, 1643
Alw21I	GWGCWC	6 cut(s)	189, 210, 820, 1239, 1431, 1800
Alw26I	GTCTC	3 cut(s)	145, 264, 984
Ama87I	CYCGRG	2 cut(s)	203, 542
Aor13HI	TCCGGA	1 cut(s)	286
AoxI	GGCC	5 cut(s)	120, 138, 859, 1198, 1578
ApeKI	GCWGC	7 cut(s)	131, 487, 583, 586, 605, 682, 1611
ApoI	RAATTY	4 cut(s)	35, 388, 735, 1700
AseI	ATTAAT	1 cut(s)	1260
AsiGI	ACCGGT	1 cut(s)	1144
Asp700I	GAANNNNTTC	1 cut(s)	1693
AspLEI	GCGC	3 cut(s)	250, 328, 1611
AspS9I	GGNCC	3 cut(s)	78, 860, 1198
AsuC2I	CCSGG	3 cut(s)	394, 1005, 1227
AsuHPI	GGTGA	5 cut(s)	397, 761, 1134, 1226, 1702
AsuNHI	GCTAGC	1 cut(s)	1772
AvaI	CYCGRG	2 cut(s)	203, 542
AvaII	GGWCC	1 cut(s)	78
BaeI	ACNNNNGTAYC	2 cut(s)	1779, 1812
BalI	TGGCCA	1 cut(s)	1580
BanI	GGYRCC	2 cut(s)	247, 325
BanII	GRGCYC	5 cut(s)	189, 210, 1239, 1431, 1476
BarI	GAAGNNNNNNTAC	2 cut(s)	1284, 1316
BauI	CACGAG	1 cut(s)	1430
Bbv12I	GWGCWC	6 cut(s)	189, 210, 820, 1239, 1431, 1800
BbvI	GCAGC	7 cut(s)	118, 499, 592, 595, 598, 694, 1623
BccI	CCATC	4 cut(s)	152, 238, 784, 1301
BceAI	ACGGC	2 cut(s)	107, 671
BciT130I	CCWGG	3 cut(s)	110, 813, 1403
BciVI	GTATCC	3 cut(s)	341, 1067, 1244
BclI	TGATCA	4 cut(s)	441, 577, 1060, 1747
BcnI	CCSGG	3 cut(s)	394, 1005, 1227
BcoDI	GTCTC	3 cut(s)	145, 264, 984
BfaI	CTAG	6 cut(s)	72, 321, 966, 1623, 1773, 1782
BfoI	RGCGCY	2 cut(s)	251, 329
BfuAI	ACCTGC	2 cut(s)	955, 1576
BfuI	GTATCC	3 cut(s)	341, 1067, 1244
BglI	GCCNNNNNGGC	1 cut(s)	1577
BglII	AGATCT	1 cut(s)	1156
BisI	GCNGC	9 cut(s)	132, 251, 380, 488, 584, 587, 606, 683, 1612
BlpI	GCTNAGC	1 cut(s)	951
BlsI	GCNGC	9 cut(s)	133, 252, 381, 489, 585, 588, 607, 684, 1613
Bme1390I	CCNGG	6 cut(s)	110, 394, 813, 1005, 1227, 1403
Bme18I	GGWCC	1 cut(s)	78
BmeT110I	CYCGRG	2 cut(s)	203, 542
BmgT120I	GGNCC	3 cut(s)	78, 860, 1198
BmiI	GGNNCC	4 cut(s)	249, 327, 1093, 1566
BmrFI	CCNGG	6 cut(s)	110, 394, 813, 1005, 1227, 1403
BmrI	ACTGGG	1 cut(s)	1554
BmsI	GCATC	8 cut(s)	396, 592, 813, 964, 1026, 1253, 1732, 1759
BmtI	GCTAGC	1 cut(s)	1776
BmuI	ACTGGG	1 cut(s)	1554
BoxI	GACNNNNGTC	1 cut(s)	698
BpmI	CTGGAG	1 cut(s)	1187
Bpu1102I	GCTNAGC	1 cut(s)	951
BpuEI	CTTGAG	1 cut(s)	196
BpuMI	CCSGG	3 cut(s)	394, 1005, 1227
Bsa29I	ATCGAT	2 cut(s)	242, 982
BsaBI	GATNNNNATC	2 cut(s)	978, 1746
BsaHI	GRCGYC	2 cut(s)	248, 326
BsaJI	CCNNGG	8 cut(s)	135, 251, 380, 393, 612, 863, 1130, 1401
BsaWI	WCCGGW	2 cut(s)	286, 1144
BsaXI	ACNNNNNCTCC	6 cut(s)	1221, 1251, 1416, 1446, 1626, 1656
Bsc4I	CCNNNNNNNGG	8 cut(s)	342, 399, 812, 843, 844, 869, 1587, 1628
Bse118I	RCCGGY	2 cut(s)	796, 1144
Bse1I	ACTGG	2 cut(s)	1272, 1549
Bse3DI	GCAATG	1 cut(s)	552
Bse8I	GATNNNNATC	2 cut(s)	978, 1746
BseAI	TCCGGA	1 cut(s)	286
BseBI	CCWGG	3 cut(s)	110, 813, 1403
BseCI	ATCGAT	2 cut(s)	242, 982
BseDI	CCNNGG	8 cut(s)	135, 251, 380, 393, 612, 863, 1130, 1401
BseGI	GGATG	3 cut(s)	418, 682, 1180
BseJI	GATNNNNATC	2 cut(s)	978, 1746
BseLI	CCNNNNNNNGG	8 cut(s)	342, 399, 812, 843, 844, 869, 1587, 1628
BseMI	GCAATG	1 cut(s)	552
BseMII	CTCAG	4 cut(s)	174, 833, 1023, 1638
BseNI	ACTGG	2 cut(s)	1272, 1549
BseRI	GAGGAG	6 cut(s)	176, 659, 795, 798, 1108, 1111
BseXI	GCAGC	7 cut(s)	118, 499, 592, 595, 598, 694, 1623
BseYI	CCCAGC	4 cut(s)	422, 490, 937, 1112
BsgI	GTGCAG	1 cut(s)	701
Bsh1236I	CGCG	2 cut(s)	253, 382
Bsh1285I	CGRYCG	1 cut(s)	257
BshFI	GGCC	5 cut(s)	122, 140, 861, 1200, 1580
BshNI	GGYRCC	2 cut(s)	247, 325
BshTI	ACCGGT	1 cut(s)	1144
BshVI	ATCGAT	2 cut(s)	242, 982
BsiEI	CGRYCG	1 cut(s)	257
BsiHKAI	GWGCWC	6 cut(s)	189, 210, 820, 1239, 1431, 1800
BsiHKCI	CYCGRG	2 cut(s)	203, 542
BsiSI	CCGG	6 cut(s)	287, 393, 797, 1005, 1145, 1226
BslFI	GGGAC	1 cut(s)	1242
BslI	CCNNNNNNNGG	8 cut(s)	342, 399, 812, 843, 844, 869, 1587, 1628
BsmAI	GTCTC	3 cut(s)	145, 264, 984
BsmBI	CGTCTC	2 cut(s)	264, 984
BsmFI	GGGAC	1 cut(s)	1242
BsnI	GGCC	5 cut(s)	122, 140, 861, 1200, 1580
BsoBI	CYCGRG	2 cut(s)	203, 542
Bsp1286I	GDGCHC	7 cut(s)	189, 210, 820, 1239, 1431, 1476, 1800
Bsp13I	TCCGGA	1 cut(s)	286
Bsp1407I	TGTACA	1 cut(s)	624
Bsp1720I	GCTNAGC	1 cut(s)	951
BspANI	GGCC	5 cut(s)	122, 140, 861, 1200, 1580
BspCNI	CTCAG	4 cut(s)	175, 832, 1024, 1639
BspDI	ATCGAT	2 cut(s)	242, 982
BspEI	TCCGGA	1 cut(s)	286
BspFNI	CGCG	2 cut(s)	253, 382
BspHI	TCATGA	4 cut(s)	114, 451, 1063, 1150
BspLI	GGNNCC	4 cut(s)	249, 327, 1093, 1566
BspMI	ACCTGC	2 cut(s)	955, 1576
BspOI	GCTAGC	1 cut(s)	1776
BspT107I	GGYRCC	2 cut(s)	247, 325
BsrBI	CCGCTC	1 cut(s)	870
BsrDI	GCAATG	1 cut(s)	552
BsrFI	RCCGGY	2 cut(s)	796, 1144
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	1272, 1549
BssAI	RCCGGY	2 cut(s)	796, 1144
BssECI	CCNNGG	8 cut(s)	135, 251, 380, 393, 612, 863, 1130, 1401
BssNI	GRCGYC	2 cut(s)	248, 326
BssSI	CACGAG	1 cut(s)	1430
BssT1I	CCWWGG	1 cut(s)	612
Bst2BI	CACGAG	1 cut(s)	1430
Bst2UI	CCWGG	3 cut(s)	110, 813, 1403
Bst4CI	ACNGT	2 cut(s)	700, 908
BstACI	GRCGYC	2 cut(s)	248, 326
BstAPI	GCANNNNNTGC	1 cut(s)	679
BstAUI	TGTACA	1 cut(s)	624
BstC8I	GCNNGC	3 cut(s)	660, 1041, 1774
BstDEI	CTNAG	5 cut(s)	183, 819, 951, 1032, 1647
BstDSI	CCRYGG	2 cut(s)	251, 380
BstF5I	GGATG	3 cut(s)	418, 682, 1180
BstFNI	CGCG	2 cut(s)	253, 382
BstH2I	RGCGCY	2 cut(s)	251, 329
BstHHI	GCGC	3 cut(s)	250, 328, 1611
BstMAI	GTCTC	3 cut(s)	145, 264, 984
BstMCI	CGRYCG	1 cut(s)	257
BstNI	CCWGG	3 cut(s)	110, 813, 1403
BstNSI	RCATGY	1 cut(s)	539
BstPAI	GACNNNNGTC	1 cut(s)	698
BstSCI	CCNGG	6 cut(s)	108, 392, 811, 1003, 1225, 1401
BstUI	CGCG	2 cut(s)	253, 382
BstV1I	GCAGC	7 cut(s)	118, 499, 592, 595, 598, 694, 1623
BstX2I	RGATCY	2 cut(s)	592, 1156
BstXI	CCANNNNNNTGG	2 cut(s)	619, 1247
BstYI	RGATCY	2 cut(s)	592, 1156
Bsu15I	ATCGAT	2 cut(s)	242, 982
BsuI	GTATCC	3 cut(s)	341, 1067, 1244
BsuRI	GGCC	5 cut(s)	122, 140, 861, 1200, 1580
BsuTUI	ATCGAT	2 cut(s)	242, 982
BtgI	CCRYGG	2 cut(s)	251, 380
BtsCI	GGATG	3 cut(s)	418, 682, 1180
BtsI	GCAGTG	1 cut(s)	1356
BtsIMutI	CAGTG	3 cut(s)	913, 1356, 1542
BveI	ACCTGC	2 cut(s)	955, 1576
Cac8I	GCNNGC	3 cut(s)	660, 1041, 1774
CciI	TCATGA	4 cut(s)	114, 451, 1063, 1150
CfoI	GCGC	3 cut(s)	250, 328, 1611
Cfr10I	RCCGGY	2 cut(s)	796, 1144
Cfr13I	GGNCC	3 cut(s)	78, 860, 1198
Cfr42I	CCGCGG	2 cut(s)	254, 383
ClaI	ATCGAT	2 cut(s)	242, 982
Csp6I	GTAC	4 cut(s)	625, 794, 944, 1292
CspAI	ACCGGT	1 cut(s)	1144
CspCI	CAANNNNNGTGG	2 cut(s)	1066, 1101
CviQI	GTAC	4 cut(s)	625, 794, 944, 1292
DdeI	CTNAG	5 cut(s)	183, 819, 951, 1032, 1647
DinI	GGCGCC	2 cut(s)	249, 327
EaeI	YGGCCR	1 cut(s)	1578
EciI	GGCGGA	1 cut(s)	366
Ecl136II	GAGCTC	4 cut(s)	187, 208, 1237, 1429
Eco130I	CCWWGG	1 cut(s)	612
Eco24I	GRGCYC	5 cut(s)	189, 210, 1239, 1431, 1476
Eco47I	GGWCC	1 cut(s)	78
Eco53kI	GAGCTC	4 cut(s)	187, 208, 1237, 1429
Eco57I	CTGAAG	1 cut(s)	1490
Eco88I	CYCGRG	2 cut(s)	203, 542
EcoICRI	GAGCTC	4 cut(s)	187, 208, 1237, 1429
EcoO109I	RGGNCCY	1 cut(s)	1198
EcoRI	GAATTC	2 cut(s)	388, 1700
EcoRII	CCWGG	3 cut(s)	108, 811, 1401
EcoT14I	CCWWGG	1 cut(s)	612
EcoT38I	GRGCYC	5 cut(s)	189, 210, 1239, 1431, 1476
EgeI	GGCGCC	2 cut(s)	249, 327
EheI	GGCGCC	2 cut(s)	249, 327
ErhI	CCWWGG	1 cut(s)	612
Esp3I	CGTCTC	2 cut(s)	264, 984
FalI	AAGNNNNNCTT	2 cut(s)	738, 770
FaqI	GGGAC	1 cut(s)	1242
FauI	CCCGC	2 cut(s)	375, 780
FauNDI	CATATG	1 cut(s)	1559
FbaI	TGATCA	4 cut(s)	441, 577, 1060, 1747
Fnu4HI	GCNGC	9 cut(s)	132, 251, 380, 488, 584, 587, 606, 683, 1612
FokI	GGATG	3 cut(s)	405, 689, 1187
FriOI	GRGCYC	5 cut(s)	189, 210, 1239, 1431, 1476
Fsp4HI	GCNGC	9 cut(s)	132, 251, 380, 488, 584, 587, 606, 683, 1612
FspBI	CTAG	6 cut(s)	72, 321, 966, 1623, 1773, 1782
GlaI	GCGC	3 cut(s)	249, 327, 1610
GluI	GCNGC	9 cut(s)	132, 251, 380, 488, 584, 587, 606, 683, 1612
GsaI	CCCAGC	4 cut(s)	426, 494, 941, 1116
GsuI	CTGGAG	1 cut(s)	1187
HaeII	RGCGCY	2 cut(s)	251, 329
HaeIII	GGCC	5 cut(s)	122, 140, 861, 1200, 1580
HapII	CCGG	6 cut(s)	287, 393, 797, 1005, 1145, 1226
HhaI	GCGC	3 cut(s)	250, 328, 1611
Hin1I	GRCGYC	2 cut(s)	248, 326
Hin6I	GCGC	3 cut(s)	248, 326, 1609
HinP1I	GCGC	3 cut(s)	248, 326, 1609
HincII	GTYRAC	3 cut(s)	48, 886, 1318
HindII	GTYRAC	3 cut(s)	48, 886, 1318
HinfI	GANTC	8 cut(s)	12, 199, 433, 448, 520, 1501, 1678, 1715
HpaI	GTTAAC	1 cut(s)	1318
HpaII	CCGG	6 cut(s)	287, 393, 797, 1005, 1145, 1226
HphI	GGTGA	5 cut(s)	397, 761, 1134, 1226, 1702
Hpy166II	GTNNAC	7 cut(s)	48, 221, 295, 625, 886, 911, 1318
Hpy8I	GTNNAC	7 cut(s)	48, 221, 295, 625, 886, 911, 1318
HpyAV	CCTTC	8 cut(s)	112, 353, 392, 1310, 1322, 1429, 1504, 1704
HpyCH4III	ACNGT	2 cut(s)	700, 908
HpyCH4IV	ACGT	1 cut(s)	217
HpyCH4V	TGCA	9 cut(s)	475, 673, 682, 826, 977, 1039, 1278, 1445, 1483
HpyF3I	CTNAG	5 cut(s)	183, 819, 951, 1032, 1647
HpySE526I	ACGT	1 cut(s)	217
Hsp92I	GRCGYC	2 cut(s)	248, 326
HspAI	GCGC	3 cut(s)	248, 326, 1609
KasI	GGCGCC	2 cut(s)	247, 325
Kpn2I	TCCGGA	1 cut(s)	286
Ksp22I	TGATCA	4 cut(s)	441, 577, 1060, 1747
KspAI	GTTAAC	1 cut(s)	1318
KspI	CCGCGG	2 cut(s)	254, 383
LmnI	GCTCC	6 cut(s)	213, 867, 1121, 1242, 1331, 1592
Lsp1109I	GCAGC	7 cut(s)	118, 499, 592, 595, 598, 694, 1623
LweI	GCATC	8 cut(s)	396, 592, 813, 964, 1026, 1253, 1732, 1759
MaeI	CTAG	6 cut(s)	72, 321, 966, 1623, 1773, 1782
MaeII	ACGT	1 cut(s)	217
MaeIII	GTNAC	2 cut(s)	763, 931
MbiI	CCGCTC	1 cut(s)	870
MboII	GAAGA	8 cut(s)	442, 771, 1166, 1343, 1471, 1496, 1510, 1848
MfeI	CAATTG	1 cut(s)	476
MflI	RGATCY	2 cut(s)	592, 1156
MhlI	GDGCHC	7 cut(s)	189, 210, 820, 1239, 1431, 1476, 1800
MlsI	TGGCCA	1 cut(s)	1580
MluNI	TGGCCA	1 cut(s)	1580
Mly113I	GGCGCC	2 cut(s)	248, 326
MlyI	GAGTC	2 cut(s)	6, 193
MmeI	TCCRAC	1 cut(s)	765
Mox20I	TGGCCA	1 cut(s)	1580
MroI	TCCGGA	1 cut(s)	286
MroXI	GAANNNNTTC	1 cut(s)	1693
MscI	TGGCCA	1 cut(s)	1580
MseI	TTAA	5 cut(s)	1260, 1317, 1527, 1584, 1605
MslI	CAYNNNNRTG	1 cut(s)	456
Msp20I	TGGCCA	1 cut(s)	1580
MspA1I	CMGCKG	4 cut(s)	253, 382, 490, 941
MspI	CCGG	6 cut(s)	287, 393, 797, 1005, 1145, 1226
MspR9I	CCNGG	6 cut(s)	110, 394, 813, 1005, 1227, 1403
MunI	CAATTG	1 cut(s)	476
MvaI	CCWGG	3 cut(s)	110, 813, 1403
MvnI	CGCG	2 cut(s)	253, 382
NarI	GGCGCC	2 cut(s)	248, 326
NciI	CCSGG	3 cut(s)	394, 1005, 1227
NdeI	CATATG	1 cut(s)	1559
NheI	GCTAGC	1 cut(s)	1772
NlaIV	GGNNCC	4 cut(s)	249, 327, 1093, 1566
NmeAIII	GCCGAG	1 cut(s)	160
NspI	RCATGY	1 cut(s)	539
PaeR7I	CTCGAG	2 cut(s)	203, 542
PagI	TCATGA	4 cut(s)	114, 451, 1063, 1150
PdmI	GAANNNNTTC	1 cut(s)	1693
PfeI	GAWTC	6 cut(s)	433, 448, 520, 1501, 1678, 1715
PinAI	ACCGGT	1 cut(s)	1144
PkrI	GCNGC	9 cut(s)	133, 252, 381, 489, 585, 588, 607, 684, 1613
PleI	GAGTC	2 cut(s)	6, 193
PluTI	GGCGCC	2 cut(s)	251, 329
PpsI	GAGTC	2 cut(s)	6, 193
PshAI	GACNNNNGTC	1 cut(s)	698
PshBI	ATTAAT	1 cut(s)	1260
Psp124BI	GAGCTC	4 cut(s)	189, 210, 1239, 1431
Psp6I	CCWGG	3 cut(s)	108, 811, 1401
PspFI	CCCAGC	4 cut(s)	422, 490, 937, 1112
PspGI	CCWGG	3 cut(s)	108, 811, 1401
PspN4I	GGNNCC	4 cut(s)	249, 327, 1093, 1566
PspPI	GGNCC	3 cut(s)	78, 860, 1198
PsuI	RGATCY	2 cut(s)	592, 1156
PvuII	CAGCTG	2 cut(s)	490, 941
RsaI	GTAC	4 cut(s)	626, 795, 945, 1293
RsaNI	GTAC	4 cut(s)	625, 794, 944, 1292
RseI	CAYNNNNRTG	1 cut(s)	456
SacI	GAGCTC	4 cut(s)	189, 210, 1239, 1431
SacII	CCGCGG	2 cut(s)	254, 383
SaqAI	TTAA	5 cut(s)	1260, 1317, 1527, 1584, 1605
SatI	GCNGC	9 cut(s)	132, 251, 380, 488, 584, 587, 606, 683, 1612
Sau96I	GGNCC	3 cut(s)	78, 860, 1198
SchI	GAGTC	2 cut(s)	6, 193
ScrFI	CCNGG	6 cut(s)	110, 394, 813, 1005, 1227, 1403
SduI	GDGCHC	7 cut(s)	189, 210, 820, 1239, 1431, 1476, 1800
SfaNI	GCATC	8 cut(s)	396, 592, 813, 964, 1026, 1253, 1732, 1759
SfoI	GGCGCC	2 cut(s)	249, 327
Sfr274I	CTCGAG	2 cut(s)	203, 542
Sfr303I	CCGCGG	2 cut(s)	254, 383
SgrBI	CCGCGG	2 cut(s)	254, 383
SinI	GGWCC	1 cut(s)	78
SlaI	CTCGAG	2 cut(s)	203, 542
SmiMI	CAYNNNNRTG	1 cut(s)	456
SmlI	CTYRAG	3 cut(s)	175, 203, 542
SmoI	CTYRAG	3 cut(s)	175, 203, 542
SspDI	GGCGCC	2 cut(s)	247, 325
SspI	AATATT	2 cut(s)	368, 898
SspMI	CTAG	6 cut(s)	72, 321, 966, 1623, 1773, 1782
SstI	GAGCTC	4 cut(s)	189, 210, 1239, 1431
StyD4I	CCNGG	6 cut(s)	108, 392, 811, 1003, 1225, 1401
StyI	CCWWGG	1 cut(s)	612
TaaI	ACNGT	2 cut(s)	700, 908
TaiI	ACGT	1 cut(s)	220
TaqII	GACCGA	1 cut(s)	66
TatI	WGTACW	1 cut(s)	624
TauI	GCSGC	2 cut(s)	253, 382
TfiI	GAWTC	6 cut(s)	433, 448, 520, 1501, 1678, 1715
Tru1I	TTAA	5 cut(s)	1260, 1317, 1527, 1584, 1605
Tru9I	TTAA	5 cut(s)	1260, 1317, 1527, 1584, 1605
TscAI	CASTG	3 cut(s)	913, 1363, 1549
TseI	GCWGC	7 cut(s)	131, 487, 583, 586, 605, 682, 1611
TspDTI	ATGAA	7 cut(s)	131, 440, 468, 521, 1139, 1167, 1693
TspGWI	ACGGA	3 cut(s)	24, 371, 1701
TspRI	CASTG	3 cut(s)	913, 1363, 1549
VpaK11BI	GGWCC	1 cut(s)	78
VspI	ATTAAT	1 cut(s)	1260
XapI	RAATTY	4 cut(s)	35, 388, 735, 1700
XbaI	TCTAGA	1 cut(s)	1781
XceI	RCATGY	1 cut(s)	539
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XhoI	CTCGAG	2 cut(s)	203, 542
XmnI	GAANNNNTTC	1 cut(s)	1693
XspI	CTAG	6 cut(s)	72, 321, 966, 1623, 1773, 1782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.