Rroxscaffold_6G00397190

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0001142
Physical Location & Seq
Forward (+)
18852453 .. 18861704
9252 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00397190.1

Sequence Viewer

Length: 2268 bp
ATGGAGAACGGTTACGATCGGAAATTCGCTGAGAAATTCTCCGGGCTGGCGATTTCCGGCGGCGCCGGTGATCCTATTCGCTCCCCCCCTAATAACAACAGCAACAACAACAACAACAATGATAGCAGCTTGTTTCAGGTTATGAAGGCCGTGGAAGCTGCGGAGGCCACGATTAAGCAACAGGTGGAAGAGAACAACCGATTGAGGACTGAGCTTCAGAACAAGATTCTTGAGCTCGATAGATATAAAATAGAGGAGTCGGGGGCACAAAGGCCGCGTTCCGATGATCCTTGGTCTGAGCGCGTCCGAGGATCTTATGAAGCTCATCAACCGGTTCCCCCTGTCGGTAGTCAAGAAGATAGGATTAGGAGTGCGGTCAATACTTCTGTACTTGATCCATCTGGTACACTAGTTCTACACCAAGAGAGTTTGAAGCCAAGGGCTGATGCTCCTCTACAAAGTAATGTGGAAACCCACTCCTCGAGCAGCAAGATCAATGGAACAATGAAGGAACTTCCGGGTAGTCAGCAGCCTGCGGATAATGCTGGCTTGTCTCACTTATCTTCACCATCCACAACATCCTTCTCTCCTGGAAGGTTTAACATGCAAGGAGATTATGATCCAAGGTTCAATTTTTCTGGACAAGGGTTGATGCCTATAACTGAATTAAATCCTAGAAGCCTCTGGAAGCAGGATCTTATTGTCAAGATTCATGAACATGAAGAAGAGATTATGCAATTACGGAAACATCTGTCTGATTATTCCGTAAAGGAAGCACAAATACGCAATGAAAAATATGTTCTGGAGAAGCGCATTGCTTATATGCGTCTGGCCTTTGATCAACAGCAACAGGATCTTGTTGATGCTGCATCGAAAGCTCTATCTTACCGACAAGACATAATTGAGGAAAATATACGCCTCACATATGCATTACAGGATGCACAGCAAGAGAGATCGACATTTGTTTCATCCTTGCTGCCACTTCTTGCAGAGTACTCTTTGCAGCCACCCGTTCTTGATGCCCAATCAATTGTCAGCAATGTCAAGGTTCTTTTTAAACATTTGCAAGAAAAGCTCCTTCTTACTGAGACAAAACTAAAGGAGTCACAGTATCATTTAAGACCTTGGAACTCAGAGTTGAATAACTCTAACATTCCCATGCAGTCACCATCTCACTCTCTTGGTGCAGTATTGACAACTTCAAACAAAAATGGGCTTGAACTGGTTCCTCAGCAAACATATTCCCAGGGAAAAGCACCCGTTTCTGCTTCTGATGTTCAGACTACCAGGGATTGGGATCTATTGGGTCGTGATCAGAGTGCTTTGGATGGTGTTGTCAATAGGAATGTGGAACCCAATGACCTGGGGAGGTATTCACCTTTTGCTAGCAGGAATTCTGCAGCACAAGATACACCTGCTCAGCTTGATGTTACTCGAGGTGATGCACCAATAACTCGTTATAGTGAAGAAACCACCAATAAACAGGTCACATTTCGTGATCCTGTCAGGAACACAGAGCTTGATGATCAAGATCCTGAGGGAAACCAAAATGAGAGAGAAATGGCAACCAATTGGAGTCCAGGAAACACTCCTTACACAACAACACCTGATGACCCCGGCTCCTCTGAACTGGATGCTTTGAAACCTAACATGTTGCAATATGCAGCTGCAGATGATGATCCATTACCAGCTATCGAGAACCTCCAAATTTCAGGAGAAGCTTTTCCGGGGAGAGAACTTCAAGCGTGCGGGTACTCTATCAATGGGACAACCAGTTGCAATTTTGAGTGGGTACGCCATATGGAAGATGGATCAGTTAATTATATCGAGGGAGCAAAGCAACCAAACTATCTAATTAGTGCTGACGATGTTCATACATATCTTGCTATTGAAGTCCAGCCTCTTGATAACAGGAATCGCAAGGGAGAGCTTGTAAAGGTTTATGCAAATGAGAACAAAAAGATTGTCTGTGATCCTGAAATGCAAGGTCAGATAGAGAAGAATTATTATCAAGGTCATTCTTCATTTAAAATCTATCAGTCGACAGGATATCTTGATATATGGGAACCTGCTATATTGGCCATTAAGAAGGACAGTTACAGTATTAAGCGTACGGAACCCAGTGGTGCTGTAATCAATGAAAAGTTTTCTCCGACAACTATTGTTGGAATTCCTTATGGAAGCCCTACAGAGTTCGTGCTAACTGGTTCTGGTGGTAGTCAGCATCTCTTAAAAACAGACAATGACCAGGCAGATTATAGCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

755

Amino Acids

84.39

Weight (kDa)

5.0

Isoelectric Point (pI)

52.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IG_AIR9 PF23197 565 - 647 1.8e-07 AIR9 A9 domain
DUF7046 PF23080 679 - 752 4.9e-21 Domain of unknown function (DUF7046)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1423
Acc36I ACCTGC 2 cut(s) 1423, 2077
AccB1I GGYRCC 1 cut(s) 62
AccB7I CCANNNNNTGG 1 cut(s) 1293
AccI GTMKAC 1 cut(s) 2042
AccII CGCG 2 cut(s) 277, 303
AciI CCGC 6 cut(s) 60, 161, 275, 374, 536, 1749
AcoI YGGCCR 1 cut(s) 2079
AcsI RAATTY 5 cut(s) 23, 35, 1393, 1707, 2169
AcuI CTGAAG 1 cut(s) 200
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 6 cut(s) 390, 406, 995, 1754, 1794, 2113
AfiI CCNNNNNNNGG 2 cut(s) 344, 1293
AflIII ACRYGT 1 cut(s) 1650
AgeI ACCGGT 1 cut(s) 331
AgsI TTSAA 8 cut(s) 433, 631, 1141, 1203, 1220, 1642, 1742, 1892
AhlI ACTAGT 1 cut(s) 409
AjnI CCWGG 6 cut(s) 589, 1245, 1286, 1362, 1579, 2247
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 2 cut(s) 558, 1082
Ama87I CYCGRG 2 cut(s) 481, 1434
AoxI GGCC 5 cut(s) 147, 165, 272, 831, 2079
ApoI RAATTY 5 cut(s) 23, 35, 1393, 1707, 2169
ArsI GACNNNNNNTTYG 2 cut(s) 1950, 1982
AsiGI ACCGGT 1 cut(s) 331
Asp700I GAANNNNTTC 2 cut(s) 1224, 1722
AspLEI GCGC 3 cut(s) 65, 303, 813
AsuC2I CCSGG 4 cut(s) 43, 519, 1617, 1728
AsuHPI GGTGA 5 cut(s) 80, 558, 1158, 1368, 1451
AsuNHI GCTAGC 1 cut(s) 1385
AvaI CYCGRG 2 cut(s) 481, 1434
AxyI CCTNAGG 1 cut(s) 1536
BaeGI GKGCMC 1 cut(s) 268
BaeI ACNNNNGTAYC 2 cut(s) 396, 429
BalI TGGCCA 1 cut(s) 2081
BanI GGYRCC 1 cut(s) 62
BanII GRGCYC 1 cut(s) 237
BarI GAAGNNNNNNTAC 4 cut(s) 765, 797, 2081, 2113
Bbv12I GWGCWC 1 cut(s) 237
BbvCI CCTCAGC 1 cut(s) 1230
BccI CCATC 5 cut(s) 406, 577, 1177, 1322, 1802
BceAI ACGGC 1 cut(s) 134
BciT130I CCWGG 6 cut(s) 591, 1247, 1288, 1364, 1581, 2249
BclI TGATCA 3 cut(s) 838, 1312, 1525
BcnI CCSGG 4 cut(s) 43, 519, 1617, 1728
BcoDI GTCTC 2 cut(s) 558, 1082
BcuI ACTAGT 1 cut(s) 409
BfaI CTAG 3 cut(s) 410, 675, 1386
BfmI CTRYAG 3 cut(s) 1398, 1668, 2187
BfoI RGCGCY 1 cut(s) 66
BfuAI ACCTGC 2 cut(s) 1423, 2077
BlpI GCTNAGC 1 cut(s) 1419
BmcAI AGTACT 1 cut(s) 995
BmeT110I CYCGRG 2 cut(s) 481, 1434
BmiI GGNNCC 7 cut(s) 64, 336, 1227, 1353, 1621, 2067, 2118
BmrI ACTGGG 1 cut(s) 2115
BmsI GCATC 9 cut(s) 436, 642, 853, 878, 928, 1009, 1432, 1624, 2233
BmtI GCTAGC 1 cut(s) 1389
BmuI ACTGGG 1 cut(s) 2115
BplI GAGNNNNNCTC 2 cut(s) 23, 55
BpmI CTGGAG 1 cut(s) 824
Bpu10I CCTNAGC 1 cut(s) 1230
Bpu1102I GCTNAGC 1 cut(s) 1419
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 4 cut(s) 43, 519, 1617, 1728
BsaBI GATNNNNATC 4 cut(s) 618, 1296, 1530, 1677
BsaHI GRCGYC 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 331
BsaXI ACNNNNNCTCC 6 cut(s) 1094, 1124, 1604, 1634, 1917, 1947
Bsc4I CCNNNNNNNGG 2 cut(s) 344, 1293
Bse118I RCCGGY 2 cut(s) 65, 331
Bse1I ACTGG 5 cut(s) 1227, 1635, 1773, 2121, 2209
Bse21I CCTNAGG 1 cut(s) 1536
Bse3DI GCAATG 3 cut(s) 793, 813, 1045
Bse8I GATNNNNATC 4 cut(s) 618, 1296, 1530, 1677
BseBI CCWGG 6 cut(s) 591, 1247, 1288, 1364, 1581, 2249
BseGI GGATG 6 cut(s) 569, 578, 943, 968, 1333, 1639
BseJI GATNNNNATC 4 cut(s) 618, 1296, 1530, 1677
BseLI CCNNNNNNNGG 2 cut(s) 344, 1293
BseMI GCAATG 3 cut(s) 793, 813, 1045
BseMII CTCAG 8 cut(s) 21, 201, 288, 1077, 1146, 1244, 1433, 1527
BseNI ACTGG 5 cut(s) 1227, 1635, 1773, 2121, 2209
BseRI GAGGAG 4 cut(s) 269, 441, 469, 1612
BseSI GKGCMC 1 cut(s) 268
BsgI GTGCAG 1 cut(s) 1206
Bsh1236I CGCG 2 cut(s) 277, 303
Bsh1285I CGRYCG 1 cut(s) 19
BshFI GGCC 5 cut(s) 149, 167, 274, 833, 2081
BshNI GGYRCC 1 cut(s) 62
BshTI ACCGGT 1 cut(s) 331
BsiEI CGRYCG 1 cut(s) 19
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 2 cut(s) 481, 1434
BsiSI CCGG 7 cut(s) 42, 57, 66, 332, 518, 1617, 1727
BsiWI CGTACG 1 cut(s) 2111
BslFI GGGAC 1 cut(s) 1780
BslI CCNNNNNNNGG 2 cut(s) 344, 1293
BsmAI GTCTC 2 cut(s) 558, 1082
BsmFI GGGAC 1 cut(s) 1780
BsnI GGCC 5 cut(s) 149, 167, 274, 833, 2081
BsoBI CYCGRG 2 cut(s) 481, 1434
Bsp1286I GDGCHC 2 cut(s) 237, 268
Bsp1720I GCTNAGC 1 cut(s) 1419
BspACI CCGC 6 cut(s) 60, 161, 275, 374, 536, 1749
BspANI GGCC 5 cut(s) 149, 167, 274, 833, 2081
BspCNI CTCAG 8 cut(s) 22, 202, 289, 1078, 1145, 1243, 1432, 1528
BspFNI CGCG 2 cut(s) 277, 303
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 7 cut(s) 64, 336, 1227, 1353, 1621, 2067, 2118
BspMAI CTGCAG 2 cut(s) 1402, 1672
BspMI ACCTGC 2 cut(s) 1423, 2077
BspOI GCTAGC 1 cut(s) 1389
BspT107I GGYRCC 1 cut(s) 62
BsrDI GCAATG 3 cut(s) 793, 813, 1045
BsrFI RCCGGY 2 cut(s) 65, 331
BsrI ACTGG 5 cut(s) 1227, 1635, 1773, 2121, 2209
BssAI RCCGGY 2 cut(s) 65, 331
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 4 cut(s) 290, 437, 623, 1124
Bst2UI CCWGG 6 cut(s) 591, 1247, 1288, 1364, 1581, 2249
Bst4CI ACNGT 4 cut(s) 11, 1110, 2096, 2102
Bst6I CTCTTC 2 cut(s) 183, 720
BstACI GRCGYC 1 cut(s) 63
BstC8I GCNNGC 5 cut(s) 48, 534, 547, 1387, 1747
BstDEI CTNAG 8 cut(s) 30, 210, 297, 1086, 1132, 1230, 1419, 1536
BstDSI CCRYGG 1 cut(s) 150
BstF5I GGATG 6 cut(s) 569, 578, 943, 968, 1333, 1639
BstFNI CGCG 2 cut(s) 277, 303
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 3 cut(s) 65, 303, 813
BstMAI GTCTC 2 cut(s) 558, 1082
BstMCI CGRYCG 1 cut(s) 19
BstMWI GCNNNNNNNGC 6 cut(s) 155, 164, 542, 875, 1072, 2078
BstNI CCWGG 6 cut(s) 591, 1247, 1288, 1364, 1581, 2249
BstNSI RCATGY 2 cut(s) 607, 1654
BstSFI CTRYAG 3 cut(s) 1398, 1668, 2187
BstSLI GKGCMC 1 cut(s) 268
BstUI CGCG 2 cut(s) 277, 303
BstX2I RGATCY 5 cut(s) 311, 694, 853, 1297, 1531
BstXI CCANNNNNNTGG 1 cut(s) 1363
BstYI RGATCY 5 cut(s) 311, 694, 853, 1297, 1531
Bsu36I CCTNAGG 1 cut(s) 1536
BsuRI GGCC 5 cut(s) 149, 167, 274, 833, 2081
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 6 cut(s) 569, 578, 943, 968, 1333, 1639
BtsIMutI CAGTG 1 cut(s) 2128
BveI ACCTGC 2 cut(s) 1423, 2077
Cac8I GCNNGC 5 cut(s) 48, 534, 547, 1387, 1747
CciI TCATGA 1 cut(s) 712
CfoI GCGC 3 cut(s) 65, 303, 813
Cfr10I RCCGGY 2 cut(s) 65, 331
CseI GACGC 2 cut(s) 292, 815
Csp6I GTAC 6 cut(s) 389, 405, 994, 1753, 1793, 2112
CspAI ACCGGT 1 cut(s) 331
CviAII CATG 5 cut(s) 604, 713, 719, 1159, 1651
CviQI GTAC 6 cut(s) 389, 405, 994, 1753, 1793, 2112
DdeI CTNAG 8 cut(s) 30, 210, 297, 1086, 1132, 1230, 1419, 1536
DinI GGCGCC 1 cut(s) 64
DraI TTTAAA 2 cut(s) 1057, 2029
EaeI YGGCCR 1 cut(s) 2079
Eam1104I CTCTTC 2 cut(s) 183, 720
EarI CTCTTC 2 cut(s) 183, 720
Ecl136II GAGCTC 1 cut(s) 235
Eco130I CCWWGG 4 cut(s) 290, 437, 623, 1124
Eco24I GRGCYC 1 cut(s) 237
Eco32I GATATC 1 cut(s) 2051
Eco53kI GAGCTC 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 200
Eco81I CCTNAGG 1 cut(s) 1536
Eco88I CYCGRG 2 cut(s) 481, 1434
EcoICRI GAGCTC 1 cut(s) 235
EcoRI GAATTC 2 cut(s) 1393, 2169
EcoRII CCWGG 6 cut(s) 589, 1245, 1286, 1362, 1579, 2247
EcoRV GATATC 1 cut(s) 2051
EcoT14I CCWWGG 4 cut(s) 290, 437, 623, 1124
EcoT22I ATGCAT 1 cut(s) 931
EcoT38I GRGCYC 1 cut(s) 237
EgeI GGCGCC 1 cut(s) 64
EheI GGCGCC 1 cut(s) 64
ErhI CCWWGG 4 cut(s) 290, 437, 623, 1124
FaeI CATG 5 cut(s) 607, 716, 722, 1162, 1654
FaqI GGGAC 1 cut(s) 1780
FatI CATG 5 cut(s) 603, 712, 718, 1158, 1650
FauI CCCGC 1 cut(s) 1742
FauNDI CATATG 2 cut(s) 925, 1800
FbaI TGATCA 3 cut(s) 838, 1312, 1525
FblI GTMKAC 1 cut(s) 2042
FokI GGATG 6 cut(s) 556, 565, 950, 955, 1340, 1646
FriOI GRGCYC 1 cut(s) 237
FspBI CTAG 3 cut(s) 410, 675, 1386
GlaI GCGC 3 cut(s) 64, 302, 812
GsuI CTGGAG 1 cut(s) 824
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 5 cut(s) 149, 167, 274, 833, 2081
HapII CCGG 7 cut(s) 42, 57, 66, 332, 518, 1617, 1727
HgaI GACGC 2 cut(s) 292, 815
HhaI GCGC 3 cut(s) 65, 303, 813
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 5 cut(s) 607, 716, 722, 1162, 1654
Hin6I GCGC 3 cut(s) 63, 301, 811
HinP1I GCGC 3 cut(s) 63, 301, 811
HincII GTYRAC 1 cut(s) 2043
HindII GTYRAC 1 cut(s) 2043
HindIII AAGCTT 1 cut(s) 1719
HinfI GANTC 6 cut(s) 226, 257, 709, 1103, 1576, 1915
HpaII CCGG 7 cut(s) 42, 57, 66, 332, 518, 1617, 1727
HphI GGTGA 5 cut(s) 80, 558, 1158, 1368, 1451
Hpy166II GTNNAC 2 cut(s) 407, 2043
Hpy8I GTNNAC 2 cut(s) 407, 2043
HpyAV CCTTC 6 cut(s) 139, 502, 588, 592, 1088, 2083
HpyCH4III ACNGT 4 cut(s) 11, 1110, 2096, 2102
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 164, 542, 875, 1072, 2078
HpyF3I CTNAG 8 cut(s) 30, 210, 297, 1086, 1132, 1230, 1419, 1536
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 5 cut(s) 607, 716, 722, 1162, 1654
HspAI GCGC 3 cut(s) 63, 301, 811
KasI GGCGCC 1 cut(s) 62
Ksp22I TGATCA 3 cut(s) 838, 1312, 1525
LmnI GCTCC 5 cut(s) 86, 454, 1080, 1625, 1832
LweI GCATC 9 cut(s) 436, 642, 853, 878, 928, 1009, 1432, 1624, 2233
MaeI CTAG 3 cut(s) 410, 675, 1386
MaeIII GTNAC 6 cut(s) 11, 1104, 1164, 1429, 1486, 2096
MboII GAAGA 9 cut(s) 200, 368, 555, 734, 737, 1478, 1817, 2011, 2013
MfeI CAATTG 2 cut(s) 1029, 1570
MflI RGATCY 5 cut(s) 311, 694, 853, 1297, 1531
MhlI GDGCHC 2 cut(s) 237, 268
MlsI TGGCCA 1 cut(s) 2081
MluNI TGGCCA 1 cut(s) 2081
Mly113I GGCGCC 1 cut(s) 63
MlyI GAGTC 3 cut(s) 266, 1112, 1585
MmeI TCCRAC 2 cut(s) 2146, 2177
Mox20I TGGCCA 1 cut(s) 2081
Mph1103I ATGCAT 1 cut(s) 931
MroXI GAANNNNTTC 2 cut(s) 1224, 1722
MscI TGGCCA 1 cut(s) 2081
MslI CAYNNNNRTG 2 cut(s) 717, 1157
Msp20I TGGCCA 1 cut(s) 2081
MspA1I CMGCKG 1 cut(s) 1667
MspI CCGG 7 cut(s) 42, 57, 66, 332, 518, 1617, 1727
MunI CAATTG 2 cut(s) 1029, 1570
MvaI CCWGG 6 cut(s) 591, 1247, 1288, 1364, 1581, 2249
MvnI CGCG 2 cut(s) 277, 303
MwoI GCNNNNNNNGC 6 cut(s) 155, 164, 542, 875, 1072, 2078
NarI GGCGCC 1 cut(s) 63
NciI CCSGG 4 cut(s) 43, 519, 1617, 1728
NdeI CATATG 2 cut(s) 925, 1800
NheI GCTAGC 1 cut(s) 1385
NlaIII CATG 5 cut(s) 607, 716, 722, 1162, 1654
NlaIV GGNNCC 7 cut(s) 64, 336, 1227, 1353, 1621, 2067, 2118
NmuCI GTSAC 3 cut(s) 1104, 1164, 1486
NsiI ATGCAT 1 cut(s) 931
NspI RCATGY 2 cut(s) 607, 1654
PaeR7I CTCGAG 2 cut(s) 481, 1434
PagI TCATGA 1 cut(s) 712
PaqCI CACCTGC 1 cut(s) 1423
PasI CCCWGGG 1 cut(s) 1246
PciI ACATGT 1 cut(s) 1650
PdmI GAANNNNTTC 2 cut(s) 1224, 1722
PfeI GAWTC 3 cut(s) 226, 709, 1915
Pfl23II CGTACG 1 cut(s) 2111
PflMI CCANNNNNTGG 1 cut(s) 1293
PfoI TCCNGGA 2 cut(s) 589, 1579
PinAI ACCGGT 1 cut(s) 331
Ple19I CGATCG 1 cut(s) 19
PleI GAGTC 3 cut(s) 265, 1111, 1584
PluTI GGCGCC 1 cut(s) 66
PpsI GAGTC 3 cut(s) 265, 1111, 1584
PscI ACATGT 1 cut(s) 1650
Psp124BI GAGCTC 1 cut(s) 237
Psp6I CCWGG 6 cut(s) 589, 1245, 1286, 1362, 1579, 2247
PspGI CCWGG 6 cut(s) 589, 1245, 1286, 1362, 1579, 2247
PspLI CGTACG 1 cut(s) 2111
PspN4I GGNNCC 7 cut(s) 64, 336, 1227, 1353, 1621, 2067, 2118
PspXI VCTCGAGB 2 cut(s) 481, 1434
PstI CTGCAG 2 cut(s) 1402, 1672
PsuI RGATCY 5 cut(s) 311, 694, 853, 1297, 1531
PvuI CGATCG 1 cut(s) 19
PvuII CAGCTG 1 cut(s) 1667
RsaI GTAC 6 cut(s) 390, 406, 995, 1754, 1794, 2113
RsaNI GTAC 6 cut(s) 389, 405, 994, 1753, 1793, 2112
RseI CAYNNNNRTG 2 cut(s) 717, 1157
SacI GAGCTC 1 cut(s) 237
SalI GTCGAC 1 cut(s) 2041
ScaI AGTACT 1 cut(s) 995
SchI GAGTC 3 cut(s) 266, 1112, 1585
SduI GDGCHC 2 cut(s) 237, 268
SfaNI GCATC 9 cut(s) 436, 642, 853, 878, 928, 1009, 1432, 1624, 2233
SfcI CTRYAG 3 cut(s) 1398, 1668, 2187
SfoI GGCGCC 1 cut(s) 64
Sfr274I CTCGAG 2 cut(s) 481, 1434
SgrAI CRCCGGYG 1 cut(s) 65
SlaI CTCGAG 2 cut(s) 481, 1434
SmiMI CAYNNNNRTG 2 cut(s) 717, 1157
SmlI CTYRAG 3 cut(s) 230, 481, 1434
SmoI CTYRAG 3 cut(s) 230, 481, 1434
SpeI ACTAGT 1 cut(s) 409
SsiI CCGC 6 cut(s) 60, 161, 275, 374, 536, 1749
SspDI GGCGCC 1 cut(s) 62
SspMI CTAG 3 cut(s) 410, 675, 1386
SstI GAGCTC 1 cut(s) 237
StyI CCWWGG 4 cut(s) 290, 437, 623, 1124
TaaI ACNGT 4 cut(s) 11, 1110, 2096, 2102
TaqI TCGA 8 cut(s) 237, 482, 872, 956, 1435, 1695, 1827, 2042
TatI WGTACW 2 cut(s) 388, 993
TauI GCSGC 2 cut(s) 63, 277
TfiI GAWTC 3 cut(s) 226, 709, 1915
TscAI CASTG 1 cut(s) 2128
TseFI GTSAC 3 cut(s) 1104, 1164, 1486
Tsp45I GTSAC 3 cut(s) 1104, 1164, 1486
TspGWI ACGGA 3 cut(s) 754, 757, 2129
TspRI CASTG 1 cut(s) 2128
Van91I CCANNNNNTGG 1 cut(s) 1293
XapI RAATTY 5 cut(s) 23, 35, 1393, 1707, 2169
XceI RCATGY 2 cut(s) 607, 1654
XcmI CCANNNNNNNNNTGG 1 cut(s) 1805
XhoI CTCGAG 2 cut(s) 481, 1434
XmiI GTMKAC 1 cut(s) 2042
XmnI GAANNNNTTC 2 cut(s) 1224, 1722
XspI CTAG 3 cut(s) 410, 675, 1386
ZrmI AGTACT 1 cut(s) 995
Zsp2I ATGCAT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.