Rh3CG300000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0001142
Physical Location & Seq
Reverse (-)
30889343 .. 30901779
12437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG300000.1

Sequence Viewer

Length: 2175 bp
ATGGAGAACGGTTACGATCGGAAGTTCGCTGATAAATTCTCCGGGCTGGCGATTTCCGGCGGCGCCGGTGATTCTATTCGCTCCCCGAATAACAACAGCAACAACAACAATGATAGCAGCTTGTTTCAGGTTATGAAGGCCGTGGAAGCTGCGGAGGCCACGATTAAGCAACAGGTGGAAGAGAACATCCGATTGAGGACTGAGCTTCAGAACAAGATTCTTGAGCTCGATAGATATAAAGTAGAGGAATCGGGGGCACAAAGGCCGCGTTCCGATGATCCTTGGTCTGAGCGCGTCCAAGGATCTTATAAAGCTCATCAACCGGTTCCCCCTGTCGGTAGTCAAGAAGATAGGATTAGGAGTGCGGTCAATACTTCTGTACTTGATCCATCTGGTACACTAGTTCTACACCAAGAGAGTTTGAAGCCAAGGGCTGATGCTCCTCTACAAAGTAATATGGAAACCCACTCCTCGAGCAGCAAGATCAATGGAACAATGAAGGAACTTCCGGGTAGTCAGCAGCCTGCGGATAATGCTGGCTTGTCTCACTTATCTTCACCATCCACAACATCCTTCTCTCCTGGAAGGTTTAACACGCAAGGAGAATATGATCCAAGGTTCAATTTTTCTGGACAAGGGTTGATGCCTATAACTGAATTAAATCCTAGAAGCCTCTGGAAGCAGGATCTTATTGTCAAGATTCATGAACATGAAGAAGAGATTATGCAATTACGGAAAAATCTGTCTGATTATTCCGTAAAGGAAGCACAAATACGCAATGAAAAATATGTTCTGGAGAAGCGTATTGCTTATATGCGTCTGGCCTTTGATCAACAGCAACAGGATCTTGTTGATGCTGCATCGAAAGCTCTATCTTACCGGCAAGACATAATTGAGGAAAATATACGCCTCACATATGCATTACAGGATGCAGTGCAAGAGAGATCGACATTTGTTTCATCCTTGCTGCCACTTCTTGCAGATTACTCTTTGCAGCCACCCGTTCTTGATGCCCAATCAATTGTCAGCAATGTCAAGGTTCTTTTTAAACATTTGCAAGAAAAGCTCCTTCTTACTGAGACAAAACTAAAGGAGTCACAGTATCATTTACGACCTTGGAACTCAGAGTTGAATAACTCTAACATTCCCATGCAGTCACCATCTCATTCTGTTGGTGCCGTGTTGACAACTTCAAACAAAAATGGACTTGAACTGGTTCCTCAGCAAACATATTCTCAGGGAAAAGCACCCGTTTCTGCTTCTGATGTTCAGACTACCAGGGATTGGGATCTATTGGGTCGTGATCAGAGTGCTTTGGATGGTTTTGTCAATAGGAATGTGGAACCCAATGACCTGGGGAGGTATTCACCTTTGGTTAGCAGGAATTCTGCAGCACAAGATACACCTACTCAGCTTGATGTTACTCGAGGTGATGCACCAATAACTCGTTATAGTGAAGAAACCACCAATAAACAGGTCACATTTCGTGATCCTGTCAGGAACACAGAGCTTGATGATCAAGATCCTGAGGGAAGCCAAAATGAGAGAGAAATGGCAACCAATTGGAGTCCAGGAAACACTCCTTACACAACAACACCTGATGACCCCGGCTCTTCGTATCACAATTTTCTACCACCAGTTCTGGAAGAACCGTCTTCTTCATTTTCTGAGGCTGCAGAGGATGATCCATTACCAGCTATCGAGAACCTCCAAATTTCAGGAGAAGCTTTTCCGGGGAGAGAACTTCAAGCGTGCGGGTACTCTATCAATGGGACAACCAGTTGCAATTTTGAGTGGGTACGCCATTTGGAAGATGGATCAGTTAATTATATTGAGGGAGCAAAGCAACCAAACTATCTAATTACTGCTGATGATGTTCATACATATCTTGCTATTGAAGTCCAGCCTCTTGATAACAGGAATCGCAAGGGAGAGCTTGTAAGGGTTTTTGCAAATGAGGACAGAAAGATTGTCTGTGATCCTGAAATGCAAGGTCAGATAGAGAAGAATTATTATCAAGGTCATTCTTCATTTAAAATCCATCAGCCGACAGGATATCTTGATATATGGGAACCTGCTATATTGACCATTAAGAAGGACAGTTACAGTATTAAGCGTACGGAACCCAGTGGTGCTGTAATCAATGAAAAGTTTTCGCCGACAACTAGTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

724

Amino Acids

81.07

Weight (kDa)

5.02

Isoelectric Point (pI)

55.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IG_AIR9 PF23197 567 - 649 2.7e-07 AIR9 A9 domain
DUF7046 PF23080 682 - 723 1.9e-10 Domain of unknown function (DUF7046)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 309
Acc36I ACCTGC 1 cut(s) 2083
AccB1I GGYRCC 2 cut(s) 62, 1175
AccB7I CCANNNNNTGG 1 cut(s) 1284
AccII CGCG 2 cut(s) 268, 294
AciI CCGC 6 cut(s) 60, 152, 266, 365, 527, 1755
AcsI RAATTY 3 cut(s) 35, 1384, 1713
AcuI CTGAAG 1 cut(s) 191
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 5 cut(s) 381, 397, 1760, 1800, 2119
AfiI CCNNNNNNNGG 2 cut(s) 335, 1284
AgeI ACCGGT 1 cut(s) 322
AgsI TTSAA 7 cut(s) 424, 622, 1132, 1194, 1211, 1748, 1898
AhlI ACTAGT 2 cut(s) 400, 2165
AjnI CCWGG 4 cut(s) 580, 1277, 1353, 1570
Alw21I GWGCWC 1 cut(s) 228
Alw26I GTCTC 2 cut(s) 549, 1073
Ama87I CYCGRG 2 cut(s) 472, 1425
AoxI GGCC 4 cut(s) 138, 156, 263, 822
ApeKI GCWGC 9 cut(s) 117, 149, 477, 520, 857, 967, 994, 1391, 1673
ApoI RAATTY 3 cut(s) 35, 1384, 1713
AsiGI ACCGGT 1 cut(s) 322
Asp700I GAANNNNTTC 2 cut(s) 1215, 1728
AspLEI GCGC 2 cut(s) 65, 294
AsuC2I CCSGG 4 cut(s) 43, 510, 1608, 1734
AsuHPI GGTGA 5 cut(s) 80, 549, 1149, 1359, 1442
AvaI CYCGRG 2 cut(s) 472, 1425
AxyI CCTNAGG 1 cut(s) 1527
BaeGI GKGCMC 1 cut(s) 259
BaeI ACNNNNGTAYC 2 cut(s) 387, 420
BanI GGYRCC 2 cut(s) 62, 1175
BanII GRGCYC 1 cut(s) 228
BarI GAAGNNNNNNTAC 4 cut(s) 756, 788, 2087, 2119
BbsI GAAGAC 1 cut(s) 1647
Bbv12I GWGCWC 1 cut(s) 228
BbvCI CCTCAGC 1 cut(s) 1221
BbvI GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
BccI CCATC 6 cut(s) 397, 568, 1168, 1313, 1808, 2049
BceAI ACGGC 2 cut(s) 125, 1163
BciT130I CCWGG 4 cut(s) 582, 1279, 1355, 1572
BclI TGATCA 3 cut(s) 829, 1303, 1516
BcnI CCSGG 4 cut(s) 43, 510, 1608, 1734
BcoDI GTCTC 2 cut(s) 549, 1073
BcuI ACTAGT 2 cut(s) 400, 2165
BfaI CTAG 3 cut(s) 401, 666, 2166
BfmI CTRYAG 2 cut(s) 1389, 1674
BfoI RGCGCY 1 cut(s) 66
BfuAI ACCTGC 1 cut(s) 2083
Bme1390I CCNGG 8 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734
BmeT110I CYCGRG 2 cut(s) 472, 1425
BmiI GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
BmrFI CCNGG 8 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734
BmrI ACTGGG 1 cut(s) 2121
BmsI GCATC 7 cut(s) 427, 633, 844, 869, 919, 1000, 1423
BmuI ACTGGG 1 cut(s) 2121
BpiI GAAGAC 1 cut(s) 1647
BpmI CTGGAG 1 cut(s) 815
Bpu10I CCTNAGC 1 cut(s) 1221
BpuEI CTTGAG 1 cut(s) 242
BpuMI CCSGG 4 cut(s) 43, 510, 1608, 1734
BsaBI GATNNNNATC 2 cut(s) 1287, 1521
BsaHI GRCGYC 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 322
BsaXI ACNNNNNCTCC 4 cut(s) 1085, 1115, 1923, 1953
Bsc4I CCNNNNNNNGG 2 cut(s) 335, 1284
Bse118I RCCGGY 3 cut(s) 65, 322, 879
Bse1I ACTGG 4 cut(s) 1218, 1637, 1779, 2127
Bse21I CCTNAGG 1 cut(s) 1527
Bse3DI GCAATG 2 cut(s) 784, 1036
Bse8I GATNNNNATC 2 cut(s) 1287, 1521
BseBI CCWGG 4 cut(s) 582, 1279, 1355, 1572
BseGI GGATG 7 cut(s) 186, 560, 569, 934, 959, 1324, 1687
BseJI GATNNNNATC 2 cut(s) 1287, 1521
BseLI CCNNNNNNNGG 2 cut(s) 335, 1284
BseMI GCAATG 2 cut(s) 784, 1036
BseMII CTCAG 9 cut(s) 192, 279, 1068, 1137, 1235, 1250, 1424, 1518, 1659
BseNI ACTGG 4 cut(s) 1218, 1637, 1779, 2127
BseRI GAGGAG 2 cut(s) 432, 460
BseSI GKGCMC 1 cut(s) 259
BseXI GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
Bsh1236I CGCG 2 cut(s) 268, 294
Bsh1285I CGRYCG 1 cut(s) 19
BshFI GGCC 4 cut(s) 140, 158, 265, 824
BshNI GGYRCC 2 cut(s) 62, 1175
BshTI ACCGGT 1 cut(s) 322
BsiEI CGRYCG 1 cut(s) 19
BsiHKAI GWGCWC 1 cut(s) 228
BsiHKCI CYCGRG 2 cut(s) 472, 1425
BsiSI CCGG 8 cut(s) 42, 57, 66, 323, 509, 880, 1608, 1733
BsiWI CGTACG 1 cut(s) 2117
BslFI GGGAC 1 cut(s) 1786
BslI CCNNNNNNNGG 2 cut(s) 335, 1284
BsmAI GTCTC 2 cut(s) 549, 1073
BsmFI GGGAC 1 cut(s) 1786
BsnI GGCC 4 cut(s) 140, 158, 265, 824
BsoBI CYCGRG 2 cut(s) 472, 1425
Bsp1286I GDGCHC 2 cut(s) 228, 259
BspACI CCGC 6 cut(s) 60, 152, 266, 365, 527, 1755
BspANI GGCC 4 cut(s) 140, 158, 265, 824
BspCNI CTCAG 9 cut(s) 193, 280, 1069, 1136, 1234, 1249, 1423, 1519, 1660
BspFNI CGCG 2 cut(s) 268, 294
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
BspMAI CTGCAG 2 cut(s) 1393, 1678
BspMI ACCTGC 1 cut(s) 2083
BspQI GCTCTTC 1 cut(s) 1618
BspT107I GGYRCC 2 cut(s) 62, 1175
BsrDI GCAATG 2 cut(s) 784, 1036
BsrFI RCCGGY 3 cut(s) 65, 322, 879
BsrI ACTGG 4 cut(s) 1218, 1637, 1779, 2127
BssAI RCCGGY 3 cut(s) 65, 322, 879
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
Bst2UI CCWGG 4 cut(s) 582, 1279, 1355, 1572
Bst4CI ACNGT 5 cut(s) 11, 1101, 1653, 2102, 2108
Bst6I CTCTTC 3 cut(s) 174, 711, 1618
BstACI GRCGYC 1 cut(s) 63
BstC8I GCNNGC 4 cut(s) 48, 525, 538, 1753
BstDEI CTNAG 9 cut(s) 201, 288, 1077, 1123, 1221, 1236, 1410, 1527, 1668
BstDSI CCRYGG 1 cut(s) 141
BstF5I GGATG 7 cut(s) 186, 560, 569, 934, 959, 1324, 1687
BstFNI CGCG 2 cut(s) 268, 294
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 2 cut(s) 65, 294
BstMAI GTCTC 2 cut(s) 549, 1073
BstMCI CGRYCG 1 cut(s) 19
BstMWI GCNNNNNNNGC 5 cut(s) 146, 155, 533, 866, 1063
BstNI CCWGG 4 cut(s) 582, 1279, 1355, 1572
BstSCI CCNGG 8 cut(s) 41, 508, 580, 1277, 1353, 1570, 1606, 1732
BstSFI CTRYAG 2 cut(s) 1389, 1674
BstSLI GKGCMC 1 cut(s) 259
BstUI CGCG 2 cut(s) 268, 294
BstV1I GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
BstV2I GAAGAC 1 cut(s) 1647
BstX2I RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
BstXI CCANNNNNNTGG 1 cut(s) 1354
BstYI RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
Bsu36I CCTNAGG 1 cut(s) 1527
BsuRI GGCC 4 cut(s) 140, 158, 265, 824
BtgI CCRYGG 1 cut(s) 141
BtsCI GGATG 7 cut(s) 186, 560, 569, 934, 959, 1324, 1687
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 2 cut(s) 939, 2134
BveI ACCTGC 1 cut(s) 2083
Cac8I GCNNGC 4 cut(s) 48, 525, 538, 1753
CciI TCATGA 1 cut(s) 703
CfoI GCGC 2 cut(s) 65, 294
Cfr10I RCCGGY 3 cut(s) 65, 322, 879
CseI GACGC 2 cut(s) 283, 806
Csp6I GTAC 5 cut(s) 380, 396, 1759, 1799, 2118
CspAI ACCGGT 1 cut(s) 322
CviAII CATG 3 cut(s) 704, 710, 1150
CviQI GTAC 5 cut(s) 380, 396, 1759, 1799, 2118
DdeI CTNAG 9 cut(s) 201, 288, 1077, 1123, 1221, 1236, 1410, 1527, 1668
DinI GGCGCC 1 cut(s) 64
DraI TTTAAA 2 cut(s) 1048, 2035
Eam1104I CTCTTC 3 cut(s) 174, 711, 1618
EarI CTCTTC 3 cut(s) 174, 711, 1618
Ecl136II GAGCTC 1 cut(s) 226
Eco130I CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
Eco24I GRGCYC 1 cut(s) 228
Eco32I GATATC 1 cut(s) 2057
Eco53kI GAGCTC 1 cut(s) 226
Eco57I CTGAAG 1 cut(s) 191
Eco81I CCTNAGG 1 cut(s) 1527
Eco88I CYCGRG 2 cut(s) 472, 1425
EcoICRI GAGCTC 1 cut(s) 226
EcoRI GAATTC 1 cut(s) 1384
EcoRII CCWGG 4 cut(s) 580, 1277, 1353, 1570
EcoRV GATATC 1 cut(s) 2057
EcoT14I CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
EcoT22I ATGCAT 1 cut(s) 922
EcoT38I GRGCYC 1 cut(s) 228
EgeI GGCGCC 1 cut(s) 64
EheI GGCGCC 1 cut(s) 64
ErhI CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
FaeI CATG 3 cut(s) 707, 713, 1153
FaqI GGGAC 1 cut(s) 1786
FatI CATG 3 cut(s) 703, 709, 1149
FauI CCCGC 1 cut(s) 1748
FauNDI CATATG 1 cut(s) 916
FbaI TGATCA 3 cut(s) 829, 1303, 1516
FokI GGATG 7 cut(s) 173, 547, 556, 941, 946, 1331, 1694
FriOI GRGCYC 1 cut(s) 228
FspBI CTAG 3 cut(s) 401, 666, 2166
GlaI GCGC 2 cut(s) 64, 293
GsuI CTGGAG 1 cut(s) 815
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 4 cut(s) 140, 158, 265, 824
HapII CCGG 8 cut(s) 42, 57, 66, 323, 509, 880, 1608, 1733
HgaI GACGC 2 cut(s) 283, 806
HhaI GCGC 2 cut(s) 65, 294
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 3 cut(s) 707, 713, 1153
Hin6I GCGC 2 cut(s) 63, 292
HinP1I GCGC 2 cut(s) 63, 292
HincII GTYRAC 1 cut(s) 1185
HindII GTYRAC 1 cut(s) 1185
HindIII AAGCTT 1 cut(s) 1725
HinfI GANTC 7 cut(s) 71, 217, 248, 700, 1094, 1567, 1921
HpaII CCGG 8 cut(s) 42, 57, 66, 323, 509, 880, 1608, 1733
HphI GGTGA 5 cut(s) 80, 549, 1149, 1359, 1442
Hpy166II GTNNAC 2 cut(s) 398, 1185
Hpy8I GTNNAC 2 cut(s) 398, 1185
HpyAV CCTTC 6 cut(s) 130, 493, 579, 583, 1079, 2089
HpyCH4III ACNGT 5 cut(s) 11, 1101, 1653, 2102, 2108
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 155, 533, 866, 1063
HpyF3I CTNAG 9 cut(s) 201, 288, 1077, 1123, 1221, 1236, 1410, 1527, 1668
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 3 cut(s) 707, 713, 1153
HspAI GCGC 2 cut(s) 63, 292
KasI GGCGCC 1 cut(s) 62
Ksp22I TGATCA 3 cut(s) 829, 1303, 1516
LguI GCTCTTC 1 cut(s) 1618
LmnI GCTCC 4 cut(s) 86, 445, 1071, 1838
Lsp1109I GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
LweI GCATC 7 cut(s) 427, 633, 844, 869, 919, 1000, 1423
MaeI CTAG 3 cut(s) 401, 666, 2166
MaeIII GTNAC 6 cut(s) 11, 1095, 1155, 1420, 1477, 2102
MfeI CAATTG 2 cut(s) 1020, 1561
MflI RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
MhlI GDGCHC 2 cut(s) 228, 259
Mly113I GGCGCC 1 cut(s) 63
MlyI GAGTC 2 cut(s) 1103, 1576
Mph1103I ATGCAT 1 cut(s) 922
MroXI GAANNNNTTC 2 cut(s) 1215, 1728
MseI TTAA 8 cut(s) 165, 591, 659, 1047, 1824, 2034, 2091, 2112
MslI CAYNNNNRTG 2 cut(s) 708, 1148
MspI CCGG 8 cut(s) 42, 57, 66, 323, 509, 880, 1608, 1733
MspR9I CCNGG 8 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734
MunI CAATTG 2 cut(s) 1020, 1561
MvaI CCWGG 4 cut(s) 582, 1279, 1355, 1572
MvnI CGCG 2 cut(s) 268, 294
MwoI GCNNNNNNNGC 5 cut(s) 146, 155, 533, 866, 1063
NarI GGCGCC 1 cut(s) 63
NciI CCSGG 4 cut(s) 43, 510, 1608, 1734
NdeI CATATG 1 cut(s) 916
NlaIII CATG 3 cut(s) 707, 713, 1153
NlaIV GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
NmuCI GTSAC 3 cut(s) 1095, 1155, 1477
NsiI ATGCAT 1 cut(s) 922
PaeR7I CTCGAG 2 cut(s) 472, 1425
PagI TCATGA 1 cut(s) 703
PciSI GCTCTTC 1 cut(s) 1618
PdmI GAANNNNTTC 2 cut(s) 1215, 1728
PfeI GAWTC 5 cut(s) 71, 217, 248, 700, 1921
Pfl23II CGTACG 1 cut(s) 2117
PflMI CCANNNNNTGG 1 cut(s) 1284
PfoI TCCNGGA 2 cut(s) 580, 1570
PinAI ACCGGT 1 cut(s) 322
Ple19I CGATCG 1 cut(s) 19
PleI GAGTC 2 cut(s) 1102, 1575
PluTI GGCGCC 1 cut(s) 66
PpsI GAGTC 2 cut(s) 1102, 1575
PsiI TTATAA 1 cut(s) 309
Psp124BI GAGCTC 1 cut(s) 228
Psp6I CCWGG 4 cut(s) 580, 1277, 1353, 1570
PspGI CCWGG 4 cut(s) 580, 1277, 1353, 1570
PspLI CGTACG 1 cut(s) 2117
PspN4I GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
PspXI VCTCGAGB 2 cut(s) 472, 1425
PstI CTGCAG 2 cut(s) 1393, 1678
PsuI RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
PvuI CGATCG 1 cut(s) 19
RsaI GTAC 5 cut(s) 381, 397, 1760, 1800, 2119
RsaNI GTAC 5 cut(s) 380, 396, 1759, 1799, 2118
RseI CAYNNNNRTG 2 cut(s) 708, 1148
SacI GAGCTC 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 1618
SaqAI TTAA 8 cut(s) 165, 591, 659, 1047, 1824, 2034, 2091, 2112
SchI GAGTC 2 cut(s) 1103, 1576
ScrFI CCNGG 8 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734
SduI GDGCHC 2 cut(s) 228, 259
SfaNI GCATC 7 cut(s) 427, 633, 844, 869, 919, 1000, 1423
SfcI CTRYAG 2 cut(s) 1389, 1674
SfoI GGCGCC 1 cut(s) 64
Sfr274I CTCGAG 2 cut(s) 472, 1425
SgrAI CRCCGGYG 1 cut(s) 65
SlaI CTCGAG 2 cut(s) 472, 1425
SmiMI CAYNNNNRTG 2 cut(s) 708, 1148
SmlI CTYRAG 3 cut(s) 221, 472, 1425
SmoI CTYRAG 3 cut(s) 221, 472, 1425
SpeI ACTAGT 2 cut(s) 400, 2165
SsiI CCGC 6 cut(s) 60, 152, 266, 365, 527, 1755
SspDI GGCGCC 1 cut(s) 62
SspMI CTAG 3 cut(s) 401, 666, 2166
SstI GAGCTC 1 cut(s) 228
StyD4I CCNGG 8 cut(s) 41, 508, 580, 1277, 1353, 1570, 1606, 1732
StyI CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
TaaI ACNGT 5 cut(s) 11, 1101, 1653, 2102, 2108
TaqI TCGA 6 cut(s) 228, 473, 863, 947, 1426, 1701
TatI WGTACW 1 cut(s) 379
TauI GCSGC 2 cut(s) 63, 268
TfiI GAWTC 5 cut(s) 71, 217, 248, 700, 1921
Tru1I TTAA 8 cut(s) 165, 591, 659, 1047, 1824, 2034, 2091, 2112
Tru9I TTAA 8 cut(s) 165, 591, 659, 1047, 1824, 2034, 2091, 2112
TscAI CASTG 2 cut(s) 939, 2134
TseFI GTSAC 3 cut(s) 1095, 1155, 1477
TseI GCWGC 9 cut(s) 117, 149, 477, 520, 857, 967, 994, 1391, 1673
Tsp45I GTSAC 3 cut(s) 1095, 1155, 1477
TspGWI ACGGA 3 cut(s) 745, 748, 2135
TspRI CASTG 2 cut(s) 939, 2134
Van91I CCANNNNNTGG 1 cut(s) 1284
XapI RAATTY 3 cut(s) 35, 1384, 1713
XcmI CCANNNNNNNNNTGG 1 cut(s) 1811
XhoI CTCGAG 2 cut(s) 472, 1425
XmnI GAANNNNTTC 2 cut(s) 1215, 1728
XspI CTAG 3 cut(s) 401, 666, 2166
Zsp2I ATGCAT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.