Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0001142

Physical Location & Seq

Genomic Coordinates Reverse (-)

31066850 .. 31068925

Gene Structure 2076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG284000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGAGAACGGACTCGATTGGAGAATTGGGGAGAAATTTTCAGGGTTGACGAGGACTCCCAGCCCTGACCCTAGTCGGTCCTCCGAAACCGACGACATTGGCTTGTTCCAGGTCATGAAGGCCGTCGAAGCTGCCGAGGCCACCATCAAGCGACAGGTCGAGGAGAACATCCGCTTGAGGTCTGAGCTCGAATACAAGACTCTCGAGCTCCACAGACGTAAACAACTCCACGAACCATCATCGATGGCGCCGCGGTCGTCTCTCGATCTGGTGGGATCGGCTCGTCCGGAAGTGAACAATTCAGGAGATAATCAAGAAGCTAGGGCGCCCAATTCCGATAATGGGGGATACAGCACGGAAGGGGAATATTATGATCCGCCGCGGGTGAATTCCGGGGAAGGGTTGATGCGATTGGATCATCCCGGCGAGAAGAATCTTGTGATCAAGATTCATGAAAATGAGCAGGAGATCATGCAATTGCGGAAGCAGCTGGGGGATTACTCGATGAAAGAAGCACGGATTCGGAACGAAAAGCATGTTCTCGAGGGTCGCATTGCTTACATGCGTTTGGTATTTGATCAGCAGCAGCAGGATCTTGCTGATGCCGCTTCCAAGGCTCTGGTGTACAGGCAAGATATAATTGAGGAGAACATACGGCTGGCTTATGCTTTGCAGGATGTGCAGCAGGAGAGGACGACGTTCGTTTCGGCATTGCTGCCGATTCTGGCAGACTACTCATTGCAGCCGCAGGTTCATGATGCTCAGTCCATTGCCAGCAATGTTAAGATTTTGTTTAGGCATTTGCAGGAGAAGCTTATTATGACAGAGTCGAAATTGAAGCAGTTTCAGTATCAAGTAAGACCTTTACAGTCGAATTCGAATCAGTCTAGCACTAACAATACCCAACAGTCACCTCCATCTCATTCCATTGGTGCAGCTTTGGAAATTTCTAACAAAGATGGGCTTGAAATGGTTACTCACCCGCCATCTTCCCATGAGAAAGTACCGGCTTCTCCTCCTCCTGGTGCTCAGATGCAGACAACCACCCCGAATTGGGATCAATCGGGTGGCCCTCGGAGCGGTTCAGGTGGTGTTGACACAGGGAATATTGAACACAGTGAACCTCAAAACAGGAACTCTGTAACCCCAGCTGTACCTGCTAAGCCTACTATTGCTAGACTTGATGCAAATCGATATAGAGACGATACAACACCCGGAAAACAGGTCAAGTTTCGTGAGCCTGAGATGCAAACACACACAGATTATGATGATCATGACGAGGGATACAATGAGAGTGGAGGAACCTCTCCTTACACCGATCCCAGCTCCTCTTATCCTCGGTATCTATCACCGGTTCATGAAGATCTGTTTTTAGACGAGGATGATCCATTACCAGCTATTGAGGGCCTCCAGATTTCGGGTGAAGCATTACCGGGACATGAGCTCCAAGCAACTGGATACTCCATCAATGGAACAACCAGCTGCAACTTTGAGTGGGTACGCCACCTTCCAGATGGATCAGTTAACTACATTGAAGGAGCAAAGCAACCGAACTATCTTCTCACTGCTGATGATGTCGATACATACCTTGCTATCGAAGTTCAACCCCTGGATAACAGGAAGCGAAAGGGAGAGCTCGTGAAGGTGTTTGCAAACGATGACAAGAAGATCACTTGTGAGCCCGAAATGCAAAGCCAGATACAGAAGATTCTTCAGAAGGGTCATGGATCATTTAAGGTGTTTGAGAACACTGGGTTTCTTGACAAATGGGAACCTGCCACTTTGGCCATTAAGAGGGGAGCTTACAGCATTAAGCGCAGCTCTGAACCTAGTGTTGGTGGAGTTGTGGTGGCTGAGAAGTTTTCGCCCAACACAATCGTTTCGATTCCTTATGGAAGCCCTTCGGAATTCATCATCACCGATTCTGATATTGCTGGTGCTGATGCTGATCATCTTTTGAAAACAGACGATGCCAGCTGTTCTAGAGATACACTTGTGCTCATATTGAGATTATTTATCGTAAGGGCTGTTGAGAGAAGGACAAGGAAAGGGAAAAAAAGGTTCTTATTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

691

Amino Acids

77.21

Weight (kDa)

5.39

Isoelectric Point (pI)

53.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IG_AIR9	PF23197	468 - 549	1.3e-07	AIR9 A9 domain
DUF7046	PF23080	582 - 684	1.5e-25	Domain of unknown function (DUF7046)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08440 AT5G08440 AT5G08440 AT5G23490 AT5G23490 AT5G23490 AT5G23490 AT5G23510 AT5G23510 AT5G23510
fragaria_vesca	FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_3g21410 FvH4_7g23540
malus_domestica	MD03G1185400.v1.1 MD04G1186900.v1.1 MD11G1230900.v1.1
prunus_persica	Prupe.4G196300_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1
pyrus_communis	pycom03g16520 pycom03g16530
rosa_chinensis	RchiOBHm_Chr1g0368691 RchiOBHm_Chr3g0485101 RchiOBHm_Chr5g0036791
rosa_laevigata	RLG00000023166 RLG00000027197 RLG00000033721
rosa_multiflora	Rmu_co8159396.1_g000001 Rmu_sc0000399.1_g000002 Rmu_sc0006040.1_g000006 Rmu_sc0006040.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044160 Rroxscaffold_4G00288350 Rroxscaffold_6G00397190
rosa_rugosa	Rorug01G0343700 Rorug03G0216200 Rorug03G0216300
rosa_samantha	Rh3AG266300 Rh3BG301700 Rh3CG300000 Rh3DG295800 Rh5AG250300 Rh5BG252000 Rh5CG284000 Rh5DG260300
rosa_wichuraiana	Rw5G023020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	739, 1165, 1783
AccB1I	GGYRCC	2 cut(s)	247, 325
AccBSI	CCGCTC	1 cut(s)	1080
AccII	CGCG	2 cut(s)	253, 382
AccIII	TCCGGA	1 cut(s)	286
AclWI	GGATC	9 cut(s)	283, 368, 423, 600, 1065, 1313, 1379, 1525, 1735
AcoI	YGGCCR	1 cut(s)	1785
AcsI	RAATTY	5 cut(s)	35, 388, 874, 945, 1907
AcuI	CTGAAG	1 cut(s)	1697
AcyI	GRCGYC	2 cut(s)	248, 326
AfaI	GTAC	4 cut(s)	626, 1005, 1155, 1500
AfiI	CCNNNNNNNGG	9 cut(s)	342, 399, 1022, 1053, 1054, 1079, 1417, 1794, 1835
AgeI	ACCGGT	1 cut(s)	1351
AgsI	TTSAA	6 cut(s)	838, 968, 1112, 1535, 1604, 1960
AjnI	CCWGG	3 cut(s)	108, 1021, 1608
AjuI	GAANNNNNNNTTGG	2 cut(s)	1818, 1850
Alw21I	GWGCWC	6 cut(s)	189, 210, 1030, 1446, 1638, 2001
Alw26I	GTCTC	2 cut(s)	264, 1194
AlwI	GGATC	9 cut(s)	283, 368, 423, 600, 1065, 1313, 1379, 1525, 1735
Ama87I	CYCGRG	2 cut(s)	203, 542
Aor13HI	TCCGGA	1 cut(s)	286
AoxI	GGCC	5 cut(s)	120, 138, 1069, 1405, 1785
ApoI	RAATTY	5 cut(s)	35, 388, 874, 945, 1907
ArsI	GACNNNNNNTTYG	2 cut(s)	688, 720
AsiGI	ACCGGT	1 cut(s)	1351
Asp700I	GAANNNNTTC	1 cut(s)	1900
AspLEI	GCGC	3 cut(s)	250, 328, 1818
AspS9I	GGNCC	3 cut(s)	78, 1070, 1405
AsuC2I	CCSGG	4 cut(s)	394, 423, 1215, 1434
AsuHPI	GGTGA	6 cut(s)	397, 903, 971, 1341, 1433, 1909
AsuII	TTCGAA	1 cut(s)	878
AvaI	CYCGRG	2 cut(s)	203, 542
AvaII	GGWCC	1 cut(s)	78
BaeI	ACNNNNGTAYC	2 cut(s)	1980, 2013
BalI	TGGCCA	1 cut(s)	1787
BanI	GGYRCC	2 cut(s)	247, 325
BanII	GRGCYC	5 cut(s)	189, 210, 1446, 1638, 1683
BarI	GAAGNNNNNNTAC	2 cut(s)	1491, 1523
BauI	CACGAG	1 cut(s)	1637
Bbv12I	GWGCWC	6 cut(s)	189, 210, 1030, 1446, 1638, 2001
BccI	CCATC	8 cut(s)	152, 238, 244, 925, 953, 994, 1472, 1508
BceAI	ACGGC	2 cut(s)	107, 671
BciT130I	CCWGG	3 cut(s)	110, 1023, 1610
BciVI	GTATCC	3 cut(s)	341, 1277, 1451
BclI	TGATCA	4 cut(s)	441, 577, 1270, 1948
BcnI	CCSGG	4 cut(s)	394, 423, 1215, 1434
BcoDI	GTCTC	2 cut(s)	264, 1194
BfaI	CTAG	6 cut(s)	72, 321, 888, 1176, 1830, 1983
BfoI	RGCGCY	2 cut(s)	251, 329
BfuAI	ACCTGC	3 cut(s)	739, 1165, 1783
BfuI	GTATCC	3 cut(s)	341, 1277, 1451
BglI	GCCNNNNNGGC	1 cut(s)	1784
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	1 cut(s)	1161
Bme1390I	CCNGG	7 cut(s)	110, 394, 423, 1023, 1215, 1434, 1610
Bme18I	GGWCC	1 cut(s)	78
BmeT110I	CYCGRG	2 cut(s)	203, 542
BmgT120I	GGNCC	3 cut(s)	78, 1070, 1405
BmiI	GGNNCC	4 cut(s)	249, 327, 1303, 1773
BmrFI	CCNGG	7 cut(s)	110, 394, 423, 1023, 1215, 1434, 1610
BmrI	ACTGGG	1 cut(s)	1761
BmsI	GCATC	8 cut(s)	396, 592, 748, 1023, 1174, 1236, 1933, 1960
BmuI	ACTGGG	1 cut(s)	1761
BoxI	GACNNNNGTC	1 cut(s)	72
BpmI	CTGGAG	1 cut(s)	1394
Bpu1102I	GCTNAGC	1 cut(s)	1161
Bpu14I	TTCGAA	1 cut(s)	878
BpuEI	CTTGAG	1 cut(s)	196
BpuMI	CCSGG	4 cut(s)	394, 423, 1215, 1434
Bsa29I	ATCGAT	2 cut(s)	242, 1192
BsaBI	GATNNNNATC	2 cut(s)	1188, 1947
BsaHI	GRCGYC	2 cut(s)	248, 326
BsaJI	CCNNGG	8 cut(s)	135, 251, 380, 393, 612, 1073, 1337, 1608
BsaWI	WCCGGW	2 cut(s)	286, 1351
BsaXI	ACNNNNNCTCC	8 cut(s)	40, 70, 1428, 1458, 1623, 1653, 1833, 1863
Bsc4I	CCNNNNNNNGG	9 cut(s)	342, 399, 1022, 1053, 1054, 1079, 1417, 1794, 1835
Bse118I	RCCGGY	2 cut(s)	1006, 1351
Bse1I	ACTGG	2 cut(s)	1459, 1756
Bse3DI	GCAATG	5 cut(s)	552, 710, 737, 768, 784
Bse8I	GATNNNNATC	2 cut(s)	1188, 1947
BseAI	TCCGGA	1 cut(s)	286
BseBI	CCWGG	3 cut(s)	110, 1023, 1610
BseCI	ATCGAT	2 cut(s)	242, 1192
BseDI	CCNNGG	8 cut(s)	135, 251, 380, 393, 612, 1073, 1337, 1608
BseGI	GGATG	4 cut(s)	168, 418, 682, 1387
BseJI	GATNNNNATC	2 cut(s)	1188, 1947
BseLI	CCNNNNNNNGG	9 cut(s)	342, 399, 1022, 1053, 1054, 1079, 1417, 1794, 1835
BseMI	GCAATG	5 cut(s)	552, 710, 737, 768, 784
BseMII	CTCAG	5 cut(s)	174, 776, 1043, 1233, 1845
BseNI	ACTGG	2 cut(s)	1459, 1756
BseRI	GAGGAG	5 cut(s)	176, 659, 1005, 1008, 1318
BseYI	CCCAGC	4 cut(s)	59, 490, 1147, 1322
BsgI	GTGCAG	2 cut(s)	701, 954
Bsh1236I	CGCG	2 cut(s)	253, 382
Bsh1285I	CGRYCG	1 cut(s)	257
BshFI	GGCC	5 cut(s)	122, 140, 1071, 1407, 1787
BshNI	GGYRCC	2 cut(s)	247, 325
BshTI	ACCGGT	1 cut(s)	1351
BshVI	ATCGAT	2 cut(s)	242, 1192
BsiEI	CGRYCG	1 cut(s)	257
BsiHKAI	GWGCWC	6 cut(s)	189, 210, 1030, 1446, 1638, 2001
BsiHKCI	CYCGRG	2 cut(s)	203, 542
BsiSI	CCGG	7 cut(s)	287, 393, 423, 1007, 1215, 1352, 1433
BslFI	GGGAC	1 cut(s)	1449
BslI	CCNNNNNNNGG	9 cut(s)	342, 399, 1022, 1053, 1054, 1079, 1417, 1794, 1835
BsmAI	GTCTC	2 cut(s)	264, 1194
BsmBI	CGTCTC	2 cut(s)	264, 1194
BsmFI	GGGAC	1 cut(s)	1449
BsnI	GGCC	5 cut(s)	122, 140, 1071, 1407, 1787
BsoBI	CYCGRG	2 cut(s)	203, 542
Bsp119I	TTCGAA	1 cut(s)	878
Bsp1286I	GDGCHC	7 cut(s)	189, 210, 1030, 1446, 1638, 1683, 2001
Bsp13I	TCCGGA	1 cut(s)	286
Bsp1407I	TGTACA	1 cut(s)	624
Bsp1720I	GCTNAGC	1 cut(s)	1161
BspANI	GGCC	5 cut(s)	122, 140, 1071, 1407, 1787
BspCNI	CTCAG	5 cut(s)	175, 775, 1042, 1234, 1846
BspDI	ATCGAT	2 cut(s)	242, 1192
BspEI	TCCGGA	1 cut(s)	286
BspFNI	CGCG	2 cut(s)	253, 382
BspHI	TCATGA	5 cut(s)	114, 451, 754, 1273, 1357
BspLI	GGNNCC	4 cut(s)	249, 327, 1303, 1773
BspMI	ACCTGC	3 cut(s)	739, 1165, 1783
BspPI	GGATC	9 cut(s)	283, 368, 423, 600, 1065, 1313, 1379, 1525, 1735
BspT104I	TTCGAA	1 cut(s)	878
BspT107I	GGYRCC	2 cut(s)	247, 325
BsrBI	CCGCTC	1 cut(s)	1080
BsrDI	GCAATG	5 cut(s)	552, 710, 737, 768, 784
BsrFI	RCCGGY	2 cut(s)	1006, 1351
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	1459, 1756
BssAI	RCCGGY	2 cut(s)	1006, 1351
BssECI	CCNNGG	8 cut(s)	135, 251, 380, 393, 612, 1073, 1337, 1608
BssNI	GRCGYC	2 cut(s)	248, 326
BssSI	CACGAG	1 cut(s)	1637
BssT1I	CCWWGG	1 cut(s)	612
Bst2BI	CACGAG	1 cut(s)	1637
Bst2UI	CCWGG	3 cut(s)	110, 1023, 1610
Bst4CI	ACNGT	3 cut(s)	870, 909, 1118
BstACI	GRCGYC	2 cut(s)	248, 326
BstAPI	GCANNNNNTGC	1 cut(s)	679
BstAUI	TGTACA	1 cut(s)	624
BstBI	TTCGAA	1 cut(s)	878
BstC8I	GCNNGC	3 cut(s)	660, 775, 1975
BstDEI	CTNAG	6 cut(s)	183, 762, 1029, 1161, 1242, 1854
BstDSI	CCRYGG	2 cut(s)	251, 380
BstF5I	GGATG	4 cut(s)	168, 418, 682, 1387
BstFNI	CGCG	2 cut(s)	253, 382
BstH2I	RGCGCY	2 cut(s)	251, 329
BstHHI	GCGC	3 cut(s)	250, 328, 1818
BstMAI	GTCTC	2 cut(s)	264, 1194
BstMCI	CGRYCG	1 cut(s)	257
BstNI	CCWGG	3 cut(s)	110, 1023, 1610
BstNSI	RCATGY	2 cut(s)	539, 565
BstPAI	GACNNNNGTC	1 cut(s)	72
BstSCI	CCNGG	7 cut(s)	108, 392, 421, 1021, 1213, 1432, 1608
BstUI	CGCG	2 cut(s)	253, 382
BstX2I	RGATCY	2 cut(s)	592, 1363
BstXI	CCANNNNNNTGG	2 cut(s)	619, 1454
BstYI	RGATCY	2 cut(s)	592, 1363
Bsu15I	ATCGAT	2 cut(s)	242, 1192
BsuI	GTATCC	3 cut(s)	341, 1277, 1451
BsuRI	GGCC	5 cut(s)	122, 140, 1071, 1407, 1787
BsuTUI	ATCGAT	2 cut(s)	242, 1192
BtgI	CCRYGG	2 cut(s)	251, 380
BtsCI	GGATG	4 cut(s)	168, 418, 682, 1387
BtsI	GCAGTG	1 cut(s)	1563
BtsIMutI	CAGTG	3 cut(s)	1123, 1563, 1749
BveI	ACCTGC	3 cut(s)	739, 1165, 1783
Cac8I	GCNNGC	3 cut(s)	660, 775, 1975
CciI	TCATGA	5 cut(s)	114, 451, 754, 1273, 1357
CfoI	GCGC	3 cut(s)	250, 328, 1818
Cfr10I	RCCGGY	2 cut(s)	1006, 1351
Cfr13I	GGNCC	3 cut(s)	78, 1070, 1405
Cfr42I	CCGCGG	2 cut(s)	254, 383
ClaI	ATCGAT	2 cut(s)	242, 1192
Csp6I	GTAC	4 cut(s)	625, 1004, 1154, 1499
CspAI	ACCGGT	1 cut(s)	1351
CspCI	CAANNNNNGTGG	2 cut(s)	1276, 1311
CviQI	GTAC	4 cut(s)	625, 1004, 1154, 1499
DdeI	CTNAG	6 cut(s)	183, 762, 1029, 1161, 1242, 1854
DinI	GGCGCC	2 cut(s)	249, 327
EaeI	YGGCCR	1 cut(s)	1785
EciI	GGCGGA	1 cut(s)	366
Ecl136II	GAGCTC	4 cut(s)	187, 208, 1444, 1636
Eco130I	CCWWGG	1 cut(s)	612
Eco24I	GRGCYC	5 cut(s)	189, 210, 1446, 1638, 1683
Eco47I	GGWCC	1 cut(s)	78
Eco53kI	GAGCTC	4 cut(s)	187, 208, 1444, 1636
Eco57I	CTGAAG	1 cut(s)	1697
Eco88I	CYCGRG	2 cut(s)	203, 542
EcoICRI	GAGCTC	4 cut(s)	187, 208, 1444, 1636
EcoO109I	RGGNCCY	1 cut(s)	1405
EcoRI	GAATTC	3 cut(s)	388, 874, 1907
EcoRII	CCWGG	3 cut(s)	108, 1021, 1608
EcoT14I	CCWWGG	1 cut(s)	612
EcoT38I	GRGCYC	5 cut(s)	189, 210, 1446, 1638, 1683
EgeI	GGCGCC	2 cut(s)	249, 327
EheI	GGCGCC	2 cut(s)	249, 327
ErhI	CCWWGG	1 cut(s)	612
Esp3I	CGTCTC	2 cut(s)	264, 1194
FalI	AAGNNNNNCTT	2 cut(s)	948, 980
FaqI	GGGAC	1 cut(s)	1449
FauI	CCCGC	2 cut(s)	375, 990
FbaI	TGATCA	4 cut(s)	441, 577, 1270, 1948
FokI	GGATG	4 cut(s)	155, 405, 689, 1394
FriOI	GRGCYC	5 cut(s)	189, 210, 1446, 1638, 1683
FspBI	CTAG	6 cut(s)	72, 321, 888, 1176, 1830, 1983
GlaI	GCGC	3 cut(s)	249, 327, 1817
GsaI	CCCAGC	4 cut(s)	63, 494, 1151, 1326
GsuI	CTGGAG	1 cut(s)	1394
HaeII	RGCGCY	2 cut(s)	251, 329
HaeIII	GGCC	5 cut(s)	122, 140, 1071, 1407, 1787
HapII	CCGG	7 cut(s)	287, 393, 423, 1007, 1215, 1352, 1433
HhaI	GCGC	3 cut(s)	250, 328, 1818
Hin1I	GRCGYC	2 cut(s)	248, 326
Hin6I	GCGC	3 cut(s)	248, 326, 1816
HinP1I	GCGC	3 cut(s)	248, 326, 1816
HincII	GTYRAC	3 cut(s)	48, 1096, 1525
HindII	GTYRAC	3 cut(s)	48, 1096, 1525
HindIII	AAGCTT	1 cut(s)	812
HpaI	GTTAAC	1 cut(s)	1525
HpaII	CCGG	7 cut(s)	287, 393, 423, 1007, 1215, 1352, 1433
HphI	GGTGA	6 cut(s)	397, 903, 971, 1341, 1433, 1909
Hpy166II	GTNNAC	7 cut(s)	48, 221, 295, 625, 1096, 1121, 1525
Hpy8I	GTNNAC	7 cut(s)	48, 221, 295, 625, 1096, 1121, 1525
Hpy99I	CGWCG	3 cut(s)	95, 128, 700
HpyAV	CCTTC	9 cut(s)	112, 353, 392, 1517, 1529, 1636, 1711, 1911, 2031
HpyCH4III	ACNGT	3 cut(s)	870, 909, 1118
HpyCH4IV	ACGT	2 cut(s)	217, 698
HpyF3I	CTNAG	6 cut(s)	183, 762, 1029, 1161, 1242, 1854
HpySE526I	ACGT	2 cut(s)	217, 698
Hsp92I	GRCGYC	2 cut(s)	248, 326
HspAI	GCGC	3 cut(s)	248, 326, 1816
KasI	GGCGCC	2 cut(s)	247, 325
Kpn2I	TCCGGA	1 cut(s)	286
Ksp22I	TGATCA	4 cut(s)	441, 577, 1270, 1948
KspAI	GTTAAC	1 cut(s)	1525
KspI	CCGCGG	2 cut(s)	254, 383
LmnI	GCTCC	6 cut(s)	213, 1077, 1331, 1449, 1538, 1799
LweI	GCATC	8 cut(s)	396, 592, 748, 1023, 1174, 1236, 1933, 1960
MaeI	CTAG	6 cut(s)	72, 321, 888, 1176, 1830, 1983
MaeII	ACGT	2 cut(s)	217, 698
MaeIII	GTNAC	3 cut(s)	909, 973, 1141
MbiI	CCGCTC	1 cut(s)	1080
MboII	GAAGA	7 cut(s)	442, 981, 1373, 1550, 1678, 1703, 1717
MfeI	CAATTG	1 cut(s)	476
MflI	RGATCY	2 cut(s)	592, 1363
MhlI	GDGCHC	7 cut(s)	189, 210, 1030, 1446, 1638, 1683, 2001
MlsI	TGGCCA	1 cut(s)	1787
MluNI	TGGCCA	1 cut(s)	1787
Mly113I	GGCGCC	2 cut(s)	248, 326
MlyI	GAGTC	4 cut(s)	6, 49, 193, 836
Mox20I	TGGCCA	1 cut(s)	1787
MroI	TCCGGA	1 cut(s)	286
MroXI	GAANNNNTTC	1 cut(s)	1900
MscI	TGGCCA	1 cut(s)	1787
MseI	TTAA	5 cut(s)	783, 1524, 1734, 1791, 1812
MslI	CAYNNNNRTG	1 cut(s)	456
Msp20I	TGGCCA	1 cut(s)	1787
MspA1I	CMGCKG	6 cut(s)	253, 382, 490, 1151, 1482, 1977
MspI	CCGG	7 cut(s)	287, 393, 423, 1007, 1215, 1352, 1433
MspR9I	CCNGG	7 cut(s)	110, 394, 423, 1023, 1215, 1434, 1610
MunI	CAATTG	1 cut(s)	476
MvaI	CCWGG	3 cut(s)	110, 1023, 1610
MvnI	CGCG	2 cut(s)	253, 382
NarI	GGCGCC	2 cut(s)	248, 326
NciI	CCSGG	4 cut(s)	394, 423, 1215, 1434
NlaIV	GGNNCC	4 cut(s)	249, 327, 1303, 1773
NmeAIII	GCCGAG	1 cut(s)	160
NmuCI	GTSAC	1 cut(s)	909
NspI	RCATGY	2 cut(s)	539, 565
NspV	TTCGAA	1 cut(s)	878
PaeR7I	CTCGAG	2 cut(s)	203, 542
PagI	TCATGA	5 cut(s)	114, 451, 754, 1273, 1357
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PdmI	GAANNNNTTC	1 cut(s)	1900
PfeI	GAWTC	8 cut(s)	433, 448, 520, 721, 880, 1708, 1885, 1922
PflFI	GACNNNGTC	1 cut(s)	826
PinAI	ACCGGT	1 cut(s)	1351
PleI	GAGTC	4 cut(s)	6, 49, 193, 835
PluTI	GGCGCC	2 cut(s)	251, 329
PpsI	GAGTC	4 cut(s)	6, 49, 193, 835
PshAI	GACNNNNGTC	1 cut(s)	72
Psp124BI	GAGCTC	4 cut(s)	189, 210, 1446, 1638
Psp6I	CCWGG	3 cut(s)	108, 1021, 1608
PspFI	CCCAGC	4 cut(s)	59, 490, 1147, 1322
PspGI	CCWGG	3 cut(s)	108, 1021, 1608
PspN4I	GGNNCC	4 cut(s)	249, 327, 1303, 1773
PspPI	GGNCC	3 cut(s)	78, 1070, 1405
PsuI	RGATCY	2 cut(s)	592, 1363
PsyI	GACNNNGTC	1 cut(s)	826
PvuII	CAGCTG	4 cut(s)	490, 1151, 1482, 1977
RsaI	GTAC	4 cut(s)	626, 1005, 1155, 1500
RsaNI	GTAC	4 cut(s)	625, 1004, 1154, 1499
RseI	CAYNNNNRTG	1 cut(s)	456
SacI	GAGCTC	4 cut(s)	189, 210, 1446, 1638
SacII	CCGCGG	2 cut(s)	254, 383
SaqAI	TTAA	5 cut(s)	783, 1524, 1734, 1791, 1812
Sau96I	GGNCC	3 cut(s)	78, 1070, 1405
SchI	GAGTC	4 cut(s)	6, 49, 193, 836
ScrFI	CCNGG	7 cut(s)	110, 394, 423, 1023, 1215, 1434, 1610
SduI	GDGCHC	7 cut(s)	189, 210, 1030, 1446, 1638, 1683, 2001
SfaNI	GCATC	8 cut(s)	396, 592, 748, 1023, 1174, 1236, 1933, 1960
SfoI	GGCGCC	2 cut(s)	249, 327
Sfr274I	CTCGAG	2 cut(s)	203, 542
Sfr303I	CCGCGG	2 cut(s)	254, 383
SfuI	TTCGAA	1 cut(s)	878
SgrBI	CCGCGG	2 cut(s)	254, 383
SinI	GGWCC	1 cut(s)	78
SlaI	CTCGAG	2 cut(s)	203, 542
SmiMI	CAYNNNNRTG	1 cut(s)	456
SmlI	CTYRAG	3 cut(s)	175, 203, 542
SmoI	CTYRAG	3 cut(s)	175, 203, 542
SspDI	GGCGCC	2 cut(s)	247, 325
SspI	AATATT	2 cut(s)	368, 1108
SspMI	CTAG	6 cut(s)	72, 321, 888, 1176, 1830, 1983
SstI	GAGCTC	4 cut(s)	189, 210, 1446, 1638
StyD4I	CCNGG	7 cut(s)	108, 392, 421, 1021, 1213, 1432, 1608
StyI	CCWWGG	1 cut(s)	612
TaaI	ACNGT	3 cut(s)	870, 909, 1118
TaiI	ACGT	2 cut(s)	220, 701
TaqII	GACCGA	1 cut(s)	66
TatI	WGTACW	1 cut(s)	624
TauI	GCSGC	4 cut(s)	253, 382, 608, 748
TfiI	GAWTC	8 cut(s)	433, 448, 520, 721, 880, 1708, 1885, 1922
Tru1I	TTAA	5 cut(s)	783, 1524, 1734, 1791, 1812
Tru9I	TTAA	5 cut(s)	783, 1524, 1734, 1791, 1812
TscAI	CASTG	3 cut(s)	1123, 1570, 1756
TseFI	GTSAC	1 cut(s)	909
Tsp45I	GTSAC	1 cut(s)	909
TspDTI	ATGAA	8 cut(s)	131, 440, 468, 521, 743, 1346, 1374, 1900
TspGWI	ACGGA	3 cut(s)	24, 371, 532
TspRI	CASTG	3 cut(s)	1123, 1570, 1756
Tth111I	GACNNNGTC	1 cut(s)	826
VpaK11BI	GGWCC	1 cut(s)	78
XapI	RAATTY	5 cut(s)	35, 388, 874, 945, 1907
XbaI	TCTAGA	1 cut(s)	1982
XceI	RCATGY	2 cut(s)	539, 565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1511
XhoI	CTCGAG	2 cut(s)	203, 542
XmnI	GAANNNNTTC	1 cut(s)	1900
XspI	CTAG	6 cut(s)	72, 321, 888, 1176, 1830, 1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.