RchiOBHm_Chr5g0036791

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0001142
Physical Location & Seq
Reverse (-)
31061636 .. 31063784
2149 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31559

Sequence Viewer

Length: 2079 bp
ATGGAGAACGGACTCGATTGGAGAATTGCGGAGAAATTTTCAGGGTTGACGAGGACTTCCAGCCCTGATCCTAGTCGGTCCTCCGAAACCGACGACATTGGCTTGTTCCAGGTCATGAAGGCCGTTGAAGCTGCCGAGGCCACCATCAAGAGACAGGTCGAGGAGAACATCCGCTTGAGGTCTGAGCTCGAATACAAGACTCTCGAGCTCCACAGACGTAAACAACTCCACGAACCATCATCGATGGCGCCGCGGTCGTCTCTCGATCTGGTAGGATCGGCTCGTCCGGAAGTGAACAATTCAGGAGATAATCAACAAGCTAGGGCGCCAAATTCCGATAATGGGGGATACAGCACCGAAGGGGAATATTATGACCCGCCGCGGGTGAATTCCGGGGAAGGGTTGATGCGATTGGATCATCCCGGCGAGAAGAATCTTGTGATCAAGATTCATGAAAATGAGCAGGAGATCATGCAATTGCGGAAGCAGCTTGGGGATTACTCGATGAAAGAAGCACAGATTCGGAACGAAAAGCATGTTCTCGAGGGTCGCATTGCTTATATGCGTTTGGTATTTGATCAGCAGCAGCAGGATCTTGCTGATGCTGCTTCCAAGGCTCTGGTGTACAGGCAAGATATAATTGAGGAGAACATACGGCTGGCTTATGCTTTGCAGGATGTGCAGCAGGAGAGGACGACGTTCGTTTCGGCATTGCTGCCGATTCTGGCAGACTACTCATTGCAGCCGCAGGTTCATGATGCTCAGTCCATTGCCAGCAATGTTCAGATTTTGTTTAGGCATTTGCAGGAGAAGCTTATTATGACAGAGTCGAAATTGAAGCAGTTTCAGTATCAAGTAAGACCTTTACAGTCGAATTCGAATCAGTCTAGCACTAACAATACCCAACAGTCACCTCCATCTCATTCCATTGGTGCAGCATTGGAAATTTCCAACAAAGATAGGCTTGAAATGGTTACTCACCCGCCATCTTCCCATGAGAAAGTACCGGCTTCTCCTCCTCCTGGTGCTCAGACGCAGACAACCGCCCCGAATTGGGATCAATCGGGTGGCCCTCGGAGCGGTTCTGGTGGTGTTGACACAGGGAATATTGAACACAGTGAACCTCAAAACAGGAACTCTGTAACCCCAGCTGTACCTGCTAAGCCTACTATTGCTAGACTTGATGCAAATCGATATAGAGACGATACAACACCCGGAAAACAGGTCAAGTTTCGTGAGCCTGAGATGCAAACACACACAGATTATGATGATCATGACGAGGGATACAATGAGAGTGGAGGAACCTCTCCTTACACCGATCCCAGCTCCTCCTCTTATCCTCGGTATCTATCACCGGTTCATGAAGATCTGTTTTTAGACGAGGATGATCCATTACCAGCTATTGAGGGCCTCCAGATTTCGGGTGAAGCTTTACCGGGACATGAGCTCCAAGCATCTGGATACTCCATTAATGGAACGACCAGTTGCAACTTTGAGTGGGTACGCCACCTTCCAGATGGATCAGTTAACTACATTGAAGGAGCAAAGCAACCGAACTATCTTCTCACTGCTGATGATGTCGATACATACCTTGCTATCGAAGTTCAACCCCTCGATAACAGGAAGCGAAAGGGAGAGCTCGTGAAGGTGTTTGCAAACGATCACAAGAAGATCACTTGTGAGCCCGAAATGCAAAGCCAGATACAGAAGATTCTTCAGAAGGGTCATGGATCATTTAAGGTGTTTGAGAACACTGGGTTTCTTGACATATGGGAACCTGCCACTTTGGCCATTAAGAGGGGAGCTTACAGCATTAAGCGCAGCTCTGAACCTAGTGTTGGTGGAGTTGTGGTGGCTGAGAAGTTTTCGCCCAACACAATCGTTTCGATTCCTTATGGAAGCCCTTCGGAATTCATCATTACTGATTCTGATATTGCTGGTGCTGATGCTGATCATCTTTTGAAAACAGACGATGCTAGCTGTTCTAGAGATACACTTGTGCTCATATTGAGATTATTTATCGTAAGGGCTGTTGAGAGAAGAACAAGGAAAGGGAAAAAAAGGGTCTTATTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

692

Amino Acids

77.26

Weight (kDa)

5.42

Isoelectric Point (pI)

54.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IG_AIR9 PF23197 469 - 550 1.1e-07 AIR9 A9 domain
DUF7046 PF23080 583 - 685 8.6e-27 Domain of unknown function (DUF7046)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 739, 1165, 1786
AccB1I GGYRCC 2 cut(s) 247, 325
AccBSI CCGCTC 1 cut(s) 1080
AccII CGCG 2 cut(s) 253, 382
AccIII TCCGGA 1 cut(s) 286
AclWI GGATC 9 cut(s) 62, 283, 423, 600, 1065, 1313, 1382, 1528, 1738
AcoI YGGCCR 1 cut(s) 1788
AcsI RAATTY 6 cut(s) 35, 331, 388, 874, 945, 1910
AcuI CTGAAG 1 cut(s) 1700
AcyI GRCGYC 2 cut(s) 248, 326
AfaI GTAC 4 cut(s) 626, 1005, 1155, 1503
AgeI ACCGGT 1 cut(s) 1354
AgsI TTSAA 7 cut(s) 128, 838, 968, 1112, 1538, 1607, 1963
AjnI CCWGG 2 cut(s) 108, 1021
AjuI GAANNNNNNNTTGG 2 cut(s) 1821, 1853
Alw21I GWGCWC 6 cut(s) 189, 210, 1030, 1449, 1641, 2004
Alw26I GTCTC 3 cut(s) 145, 264, 1194
AlwI GGATC 9 cut(s) 62, 283, 423, 600, 1065, 1313, 1382, 1528, 1738
Ama87I CYCGRG 2 cut(s) 203, 542
Aor13HI TCCGGA 1 cut(s) 286
AoxI GGCC 5 cut(s) 120, 138, 1069, 1408, 1788
ApoI RAATTY 6 cut(s) 35, 331, 388, 874, 945, 1910
ArsI GACNNNNNNTTYG 2 cut(s) 688, 720
AseI ATTAAT 1 cut(s) 1470
AsiGI ACCGGT 1 cut(s) 1354
Asp700I GAANNNNTTC 1 cut(s) 1903
AspLEI GCGC 3 cut(s) 250, 328, 1821
AspS9I GGNCC 3 cut(s) 78, 1070, 1408
AsuC2I CCSGG 4 cut(s) 394, 423, 1215, 1437
AsuHPI GGTGA 5 cut(s) 397, 903, 971, 1344, 1436
AsuII TTCGAA 1 cut(s) 878
AsuNHI GCTAGC 1 cut(s) 1976
AvaI CYCGRG 2 cut(s) 203, 542
AvaII GGWCC 1 cut(s) 78
BaeI ACNNNNGTAYC 2 cut(s) 1983, 2016
BalI TGGCCA 1 cut(s) 1790
BanI GGYRCC 2 cut(s) 247, 325
BanII GRGCYC 5 cut(s) 189, 210, 1449, 1641, 1686
BarI GAAGNNNNNNTAC 2 cut(s) 1494, 1526
BauI CACGAG 1 cut(s) 1640
Bbv12I GWGCWC 6 cut(s) 189, 210, 1030, 1449, 1641, 2004
BccI CCATC 6 cut(s) 152, 238, 244, 925, 994, 1511
BceAI ACGGC 2 cut(s) 107, 671
BciT130I CCWGG 2 cut(s) 110, 1023
BciVI GTATCC 3 cut(s) 341, 1277, 1454
BclI TGATCA 4 cut(s) 441, 577, 1270, 1951
BcnI CCSGG 4 cut(s) 394, 423, 1215, 1437
BcoDI GTCTC 3 cut(s) 145, 264, 1194
BfaI CTAG 7 cut(s) 72, 321, 888, 1176, 1833, 1977, 1986
BfoI RGCGCY 2 cut(s) 251, 329
BfuAI ACCTGC 3 cut(s) 739, 1165, 1786
BfuI GTATCC 3 cut(s) 341, 1277, 1454
BglI GCCNNNNNGGC 1 cut(s) 1787
BglII AGATCT 1 cut(s) 1366
BlpI GCTNAGC 1 cut(s) 1161
Bme1390I CCNGG 6 cut(s) 110, 394, 423, 1023, 1215, 1437
Bme18I GGWCC 1 cut(s) 78
BmeT110I CYCGRG 2 cut(s) 203, 542
BmgT120I GGNCC 3 cut(s) 78, 1070, 1408
BmiI GGNNCC 4 cut(s) 249, 327, 1303, 1776
BmrFI CCNGG 6 cut(s) 110, 394, 423, 1023, 1215, 1437
BmrI ACTGGG 1 cut(s) 1764
BmsI GCATC 8 cut(s) 396, 592, 748, 1174, 1236, 1463, 1936, 1963
BmtI GCTAGC 1 cut(s) 1980
BmuI ACTGGG 1 cut(s) 1764
BpmI CTGGAG 1 cut(s) 1397
Bpu1102I GCTNAGC 1 cut(s) 1161
Bpu14I TTCGAA 1 cut(s) 878
BpuEI CTTGAG 1 cut(s) 196
BpuMI CCSGG 4 cut(s) 394, 423, 1215, 1437
Bsa29I ATCGAT 2 cut(s) 242, 1192
BsaBI GATNNNNATC 2 cut(s) 1188, 1950
BsaHI GRCGYC 2 cut(s) 248, 326
BsaJI CCNNGG 7 cut(s) 135, 251, 380, 393, 612, 1073, 1340
BsaWI WCCGGW 2 cut(s) 286, 1354
BsaXI ACNNNNNCTCC 6 cut(s) 1431, 1461, 1626, 1656, 1836, 1866
Bse118I RCCGGY 2 cut(s) 1006, 1354
Bse1I ACTGG 2 cut(s) 1482, 1759
Bse3DI GCAATG 5 cut(s) 552, 710, 737, 768, 784
Bse8I GATNNNNATC 2 cut(s) 1188, 1950
BseAI TCCGGA 1 cut(s) 286
BseBI CCWGG 2 cut(s) 110, 1023
BseCI ATCGAT 2 cut(s) 242, 1192
BseDI CCNNGG 7 cut(s) 135, 251, 380, 393, 612, 1073, 1340
BseGI GGATG 4 cut(s) 168, 418, 682, 1390
BseJI GATNNNNATC 2 cut(s) 1188, 1950
BseMI GCAATG 5 cut(s) 552, 710, 737, 768, 784
BseMII CTCAG 5 cut(s) 174, 776, 1043, 1233, 1848
BseNI ACTGG 2 cut(s) 1482, 1759
BseRI GAGGAG 6 cut(s) 176, 659, 1005, 1008, 1318, 1321
BseYI CCCAGC 2 cut(s) 1147, 1322
BsgI GTGCAG 2 cut(s) 701, 954
Bsh1236I CGCG 2 cut(s) 253, 382
Bsh1285I CGRYCG 1 cut(s) 257
BshFI GGCC 5 cut(s) 122, 140, 1071, 1410, 1790
BshNI GGYRCC 2 cut(s) 247, 325
BshTI ACCGGT 1 cut(s) 1354
BshVI ATCGAT 2 cut(s) 242, 1192
BsiEI CGRYCG 1 cut(s) 257
BsiHKAI GWGCWC 6 cut(s) 189, 210, 1030, 1449, 1641, 2004
BsiHKCI CYCGRG 2 cut(s) 203, 542
BsiSI CCGG 7 cut(s) 287, 393, 423, 1007, 1215, 1355, 1436
BslFI GGGAC 1 cut(s) 1452
BsmAI GTCTC 3 cut(s) 145, 264, 1194
BsmBI CGTCTC 2 cut(s) 264, 1194
BsmFI GGGAC 1 cut(s) 1452
BsnI GGCC 5 cut(s) 122, 140, 1071, 1410, 1790
BsoBI CYCGRG 2 cut(s) 203, 542
Bsp119I TTCGAA 1 cut(s) 878
Bsp1286I GDGCHC 7 cut(s) 189, 210, 1030, 1449, 1641, 1686, 2004
Bsp13I TCCGGA 1 cut(s) 286
Bsp1407I TGTACA 1 cut(s) 624
Bsp1720I GCTNAGC 1 cut(s) 1161
BspANI GGCC 5 cut(s) 122, 140, 1071, 1410, 1790
BspCNI CTCAG 5 cut(s) 175, 775, 1042, 1234, 1849
BspDI ATCGAT 2 cut(s) 242, 1192
BspEI TCCGGA 1 cut(s) 286
BspFNI CGCG 2 cut(s) 253, 382
BspHI TCATGA 5 cut(s) 114, 451, 754, 1273, 1360
BspLI GGNNCC 4 cut(s) 249, 327, 1303, 1776
BspMI ACCTGC 3 cut(s) 739, 1165, 1786
BspOI GCTAGC 1 cut(s) 1980
BspPI GGATC 9 cut(s) 62, 283, 423, 600, 1065, 1313, 1382, 1528, 1738
BspT104I TTCGAA 1 cut(s) 878
BspT107I GGYRCC 2 cut(s) 247, 325
BsrBI CCGCTC 1 cut(s) 1080
BsrDI GCAATG 5 cut(s) 552, 710, 737, 768, 784
BsrFI RCCGGY 2 cut(s) 1006, 1354
BsrGI TGTACA 1 cut(s) 624
BsrI ACTGG 2 cut(s) 1482, 1759
BssAI RCCGGY 2 cut(s) 1006, 1354
BssECI CCNNGG 7 cut(s) 135, 251, 380, 393, 612, 1073, 1340
BssNI GRCGYC 2 cut(s) 248, 326
BssSI CACGAG 1 cut(s) 1640
BssT1I CCWWGG 1 cut(s) 612
Bst2BI CACGAG 1 cut(s) 1640
Bst2UI CCWGG 2 cut(s) 110, 1023
Bst4CI ACNGT 3 cut(s) 870, 909, 1118
BstACI GRCGYC 2 cut(s) 248, 326
BstAPI GCANNNNNTGC 1 cut(s) 679
BstAUI TGTACA 1 cut(s) 624
BstBI TTCGAA 1 cut(s) 878
BstC8I GCNNGC 3 cut(s) 660, 775, 1978
BstDEI CTNAG 6 cut(s) 183, 762, 1029, 1161, 1242, 1857
BstDSI CCRYGG 2 cut(s) 251, 380
BstF5I GGATG 4 cut(s) 168, 418, 682, 1390
BstFNI CGCG 2 cut(s) 253, 382
BstH2I RGCGCY 2 cut(s) 251, 329
BstHHI GCGC 3 cut(s) 250, 328, 1821
BstMAI GTCTC 3 cut(s) 145, 264, 1194
BstMCI CGRYCG 1 cut(s) 257
BstNI CCWGG 2 cut(s) 110, 1023
BstNSI RCATGY 1 cut(s) 539
BstSCI CCNGG 6 cut(s) 108, 392, 421, 1021, 1213, 1435
BstUI CGCG 2 cut(s) 253, 382
BstX2I RGATCY 2 cut(s) 592, 1366
BstXI CCANNNNNNTGG 2 cut(s) 619, 1457
BstYI RGATCY 2 cut(s) 592, 1366
Bsu15I ATCGAT 2 cut(s) 242, 1192
BsuI GTATCC 3 cut(s) 341, 1277, 1454
BsuRI GGCC 5 cut(s) 122, 140, 1071, 1410, 1790
BsuTUI ATCGAT 2 cut(s) 242, 1192
BtgI CCRYGG 2 cut(s) 251, 380
BtsCI GGATG 4 cut(s) 168, 418, 682, 1390
BtsI GCAGTG 1 cut(s) 1566
BtsIMutI CAGTG 3 cut(s) 1123, 1566, 1752
BveI ACCTGC 3 cut(s) 739, 1165, 1786
Cac8I GCNNGC 3 cut(s) 660, 775, 1978
CciI TCATGA 5 cut(s) 114, 451, 754, 1273, 1360
CfoI GCGC 3 cut(s) 250, 328, 1821
Cfr10I RCCGGY 2 cut(s) 1006, 1354
Cfr13I GGNCC 3 cut(s) 78, 1070, 1408
Cfr42I CCGCGG 2 cut(s) 254, 383
ClaI ATCGAT 2 cut(s) 242, 1192
CseI GACGC 1 cut(s) 1042
Csp6I GTAC 4 cut(s) 625, 1004, 1154, 1502
CspAI ACCGGT 1 cut(s) 1354
CspCI CAANNNNNGTGG 2 cut(s) 1276, 1311
CviQI GTAC 4 cut(s) 625, 1004, 1154, 1502
DdeI CTNAG 6 cut(s) 183, 762, 1029, 1161, 1242, 1857
DinI GGCGCC 2 cut(s) 249, 327
EaeI YGGCCR 1 cut(s) 1788
Ecl136II GAGCTC 4 cut(s) 187, 208, 1447, 1639
Eco130I CCWWGG 1 cut(s) 612
Eco24I GRGCYC 5 cut(s) 189, 210, 1449, 1641, 1686
Eco47I GGWCC 1 cut(s) 78
Eco53kI GAGCTC 4 cut(s) 187, 208, 1447, 1639
Eco57I CTGAAG 1 cut(s) 1700
Eco88I CYCGRG 2 cut(s) 203, 542
EcoICRI GAGCTC 4 cut(s) 187, 208, 1447, 1639
EcoO109I RGGNCCY 1 cut(s) 1408
EcoRI GAATTC 3 cut(s) 388, 874, 1910
EcoRII CCWGG 2 cut(s) 108, 1021
EcoT14I CCWWGG 1 cut(s) 612
EcoT38I GRGCYC 5 cut(s) 189, 210, 1449, 1641, 1686
EgeI GGCGCC 2 cut(s) 249, 327
EheI GGCGCC 2 cut(s) 249, 327
ErhI CCWWGG 1 cut(s) 612
Esp3I CGTCTC 2 cut(s) 264, 1194
FalI AAGNNNNNCTT 2 cut(s) 948, 980
FaqI GGGAC 1 cut(s) 1452
FauI CCCGC 3 cut(s) 375, 384, 990
FauNDI CATATG 1 cut(s) 1769
FbaI TGATCA 4 cut(s) 441, 577, 1270, 1951
FokI GGATG 4 cut(s) 155, 405, 689, 1397
FriOI GRGCYC 5 cut(s) 189, 210, 1449, 1641, 1686
FspBI CTAG 7 cut(s) 72, 321, 888, 1176, 1833, 1977, 1986
GlaI GCGC 3 cut(s) 249, 327, 1820
GsaI CCCAGC 2 cut(s) 1151, 1326
GsuI CTGGAG 1 cut(s) 1397
HaeII RGCGCY 2 cut(s) 251, 329
HaeIII GGCC 5 cut(s) 122, 140, 1071, 1410, 1790
HapII CCGG 7 cut(s) 287, 393, 423, 1007, 1215, 1355, 1436
HgaI GACGC 1 cut(s) 1042
HhaI GCGC 3 cut(s) 250, 328, 1821
Hin1I GRCGYC 2 cut(s) 248, 326
Hin6I GCGC 3 cut(s) 248, 326, 1819
HinP1I GCGC 3 cut(s) 248, 326, 1819
HincII GTYRAC 3 cut(s) 48, 1096, 1528
HindII GTYRAC 3 cut(s) 48, 1096, 1528
HindIII AAGCTT 2 cut(s) 812, 1428
HpaI GTTAAC 1 cut(s) 1528
HpaII CCGG 7 cut(s) 287, 393, 423, 1007, 1215, 1355, 1436
HphI GGTGA 5 cut(s) 397, 903, 971, 1344, 1436
Hpy166II GTNNAC 7 cut(s) 48, 221, 295, 625, 1096, 1121, 1528
Hpy8I GTNNAC 7 cut(s) 48, 221, 295, 625, 1096, 1121, 1528
Hpy99I CGWCG 2 cut(s) 95, 700
HpyAV CCTTC 8 cut(s) 112, 353, 392, 1520, 1532, 1639, 1714, 1914
HpyCH4III ACNGT 3 cut(s) 870, 909, 1118
HpyCH4IV ACGT 2 cut(s) 217, 698
HpyF3I CTNAG 6 cut(s) 183, 762, 1029, 1161, 1242, 1857
HpySE526I ACGT 2 cut(s) 217, 698
Hsp92I GRCGYC 2 cut(s) 248, 326
HspAI GCGC 3 cut(s) 248, 326, 1819
KasI GGCGCC 2 cut(s) 247, 325
Kpn2I TCCGGA 1 cut(s) 286
Ksp22I TGATCA 4 cut(s) 441, 577, 1270, 1951
KspAI GTTAAC 1 cut(s) 1528
KspI CCGCGG 2 cut(s) 254, 383
LmnI GCTCC 6 cut(s) 213, 1077, 1331, 1452, 1541, 1802
LweI GCATC 8 cut(s) 396, 592, 748, 1174, 1236, 1463, 1936, 1963
MaeI CTAG 7 cut(s) 72, 321, 888, 1176, 1833, 1977, 1986
MaeII ACGT 2 cut(s) 217, 698
MaeIII GTNAC 3 cut(s) 909, 973, 1141
MbiI CCGCTC 1 cut(s) 1080
MboII GAAGA 8 cut(s) 442, 981, 1376, 1553, 1681, 1706, 1720, 2052
MfeI CAATTG 1 cut(s) 476
MflI RGATCY 2 cut(s) 592, 1366
MhlI GDGCHC 7 cut(s) 189, 210, 1030, 1449, 1641, 1686, 2004
MlsI TGGCCA 1 cut(s) 1790
MluNI TGGCCA 1 cut(s) 1790
Mly113I GGCGCC 2 cut(s) 248, 326
MlyI GAGTC 3 cut(s) 6, 193, 836
MmeI TCCRAC 1 cut(s) 975
Mox20I TGGCCA 1 cut(s) 1790
MroI TCCGGA 1 cut(s) 286
MroXI GAANNNNTTC 1 cut(s) 1903
MscI TGGCCA 1 cut(s) 1790
MseI TTAA 5 cut(s) 1470, 1527, 1737, 1794, 1815
MslI CAYNNNNRTG 1 cut(s) 456
Msp20I TGGCCA 1 cut(s) 1790
MspA1I CMGCKG 3 cut(s) 253, 382, 1151
MspI CCGG 7 cut(s) 287, 393, 423, 1007, 1215, 1355, 1436
MspR9I CCNGG 6 cut(s) 110, 394, 423, 1023, 1215, 1437
MunI CAATTG 1 cut(s) 476
MvaI CCWGG 2 cut(s) 110, 1023
MvnI CGCG 2 cut(s) 253, 382
NarI GGCGCC 2 cut(s) 248, 326
NciI CCSGG 4 cut(s) 394, 423, 1215, 1437
NdeI CATATG 1 cut(s) 1769
NheI GCTAGC 1 cut(s) 1976
NlaIV GGNNCC 4 cut(s) 249, 327, 1303, 1776
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 1 cut(s) 909
NspI RCATGY 1 cut(s) 539
NspV TTCGAA 1 cut(s) 878
PaeR7I CTCGAG 2 cut(s) 203, 542
PagI TCATGA 5 cut(s) 114, 451, 754, 1273, 1360
PdmI GAANNNNTTC 1 cut(s) 1903
PfeI GAWTC 8 cut(s) 433, 448, 520, 721, 880, 1711, 1888, 1925
PflFI GACNNNGTC 1 cut(s) 826
PinAI ACCGGT 1 cut(s) 1354
PleI GAGTC 3 cut(s) 6, 193, 835
PluTI GGCGCC 2 cut(s) 251, 329
PpsI GAGTC 3 cut(s) 6, 193, 835
PshBI ATTAAT 1 cut(s) 1470
Psp124BI GAGCTC 4 cut(s) 189, 210, 1449, 1641
Psp6I CCWGG 2 cut(s) 108, 1021
PspFI CCCAGC 2 cut(s) 1147, 1322
PspGI CCWGG 2 cut(s) 108, 1021
PspN4I GGNNCC 4 cut(s) 249, 327, 1303, 1776
PspPI GGNCC 3 cut(s) 78, 1070, 1408
PsuI RGATCY 2 cut(s) 592, 1366
PsyI GACNNNGTC 1 cut(s) 826
PvuII CAGCTG 1 cut(s) 1151
RsaI GTAC 4 cut(s) 626, 1005, 1155, 1503
RsaNI GTAC 4 cut(s) 625, 1004, 1154, 1502
RseI CAYNNNNRTG 1 cut(s) 456
SacI GAGCTC 4 cut(s) 189, 210, 1449, 1641
SacII CCGCGG 2 cut(s) 254, 383
SaqAI TTAA 5 cut(s) 1470, 1527, 1737, 1794, 1815
Sau96I GGNCC 3 cut(s) 78, 1070, 1408
SchI GAGTC 3 cut(s) 6, 193, 836
ScrFI CCNGG 6 cut(s) 110, 394, 423, 1023, 1215, 1437
SduI GDGCHC 7 cut(s) 189, 210, 1030, 1449, 1641, 1686, 2004
SfaNI GCATC 8 cut(s) 396, 592, 748, 1174, 1236, 1463, 1936, 1963
SfoI GGCGCC 2 cut(s) 249, 327
Sfr274I CTCGAG 2 cut(s) 203, 542
Sfr303I CCGCGG 2 cut(s) 254, 383
SfuI TTCGAA 1 cut(s) 878
SgrBI CCGCGG 2 cut(s) 254, 383
SinI GGWCC 1 cut(s) 78
SlaI CTCGAG 2 cut(s) 203, 542
SmiMI CAYNNNNRTG 1 cut(s) 456
SmlI CTYRAG 3 cut(s) 175, 203, 542
SmoI CTYRAG 3 cut(s) 175, 203, 542
SspDI GGCGCC 2 cut(s) 247, 325
SspI AATATT 2 cut(s) 368, 1108
SspMI CTAG 7 cut(s) 72, 321, 888, 1176, 1833, 1977, 1986
SstI GAGCTC 4 cut(s) 189, 210, 1449, 1641
StyD4I CCNGG 6 cut(s) 108, 392, 421, 1021, 1213, 1435
StyI CCWWGG 1 cut(s) 612
TaaI ACNGT 3 cut(s) 870, 909, 1118
TaiI ACGT 2 cut(s) 220, 701
TaqII GACCGA 1 cut(s) 66
TatI WGTACW 1 cut(s) 624
TauI GCSGC 3 cut(s) 253, 382, 748
TfiI GAWTC 8 cut(s) 433, 448, 520, 721, 880, 1711, 1888, 1925
Tru1I TTAA 5 cut(s) 1470, 1527, 1737, 1794, 1815
Tru9I TTAA 5 cut(s) 1470, 1527, 1737, 1794, 1815
TscAI CASTG 3 cut(s) 1123, 1573, 1759
TseFI GTSAC 1 cut(s) 909
Tsp45I GTSAC 1 cut(s) 909
TspDTI ATGAA 8 cut(s) 131, 440, 468, 521, 743, 1349, 1377, 1903
TspGWI ACGGA 1 cut(s) 24
TspRI CASTG 3 cut(s) 1123, 1573, 1759
Tth111I GACNNNGTC 1 cut(s) 826
VpaK11BI GGWCC 1 cut(s) 78
VspI ATTAAT 1 cut(s) 1470
XapI RAATTY 6 cut(s) 35, 331, 388, 874, 945, 1910
XbaI TCTAGA 1 cut(s) 1985
XceI RCATGY 1 cut(s) 539
XcmI CCANNNNNNNNNTGG 1 cut(s) 1514
XhoI CTCGAG 2 cut(s) 203, 542
XmnI GAANNNNTTC 1 cut(s) 1903
XspI CTAG 7 cut(s) 72, 321, 888, 1176, 1833, 1977, 1986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.