RchiOBHm_Chr3g0485101

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0001142
Physical Location & Seq
Reverse (-)
31670663 .. 31682775
12113 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44976

Sequence Viewer

Length: 2361 bp
ATGGAGAACGGTTACGATCGGAAATTCGCTGATAAATTCTCCGGGCTGGCGATTTCCGGCGGCGCCGGTGATCCTCTTCGCTCCCCTAATAACAACAGCAACAACAACAATGATAGCAGCTTGTTTCAGGTTATGAAGGCCGTGGAAGCTGCGGAGGCCACGATTAAGCAACAGGTGGAAGAGAACATCCGATTGAGGACTGAGCTTCAGAACAAGATTCTTGAGCTCGATAGATATAAAATAGAGGAATCGGGGGCACAAAGGCCGCGTTCCGATGATCCTTGGTCTGAGCGCGTCCAAGGATCTTATGAAGCTCATCAACCGGTTCCCCCTGTCGGTAGTCAAGAAGATAGGATTAGGAGTGCGGTCAATACTTCTGTACTTGATCCATCTGGTACACTAGTTCTACACCAAGAGAGTTTGAAGCCAAGGGCTGATGCTCCTCTACAAAGTAATGTGGAAACCCACTCCTCGAGCAGCAAGATCAATGGAACAATGAAGGAACTTCCGGGTAGTCAGCAGCCTGCGGATAATGCTGGCTTGTCTCACTTATCTTCACCATCCACAACATCCTTCTCTCCTGGAAGGTTTAACATGCAAGGAGAATATGATCCAAGGTTCAATTTTTCTGGACAAGGGTTGATGCCTATAACTGAATTAAATCCTAGAAGCCTCTGGAAGCAGGATCTTATTGTCAAGATTCATGAACATGAAGAAGAGATTATGCAATTACGGAAAAATCTGTCTGATTATTCCGTAAAGGAAGCACAAATACGCAATGAAAAATATGTTCTGGAGAAGCGCATTGCTTATATGCGTCTGGCCTTTGATCAACAGCAACAGGATCTTGTTGATGCTGCATCGAAAGCTCTATCTTACCGACAAGACATAATTGAGGAAAATATACGCCTCACATATGCGTTACAGGATGCAGTGCAAGAGAGATCGACATTTGTTTCATCCTTGCTGCCACTTCTTGCAGAGTACTCTTTGCAGCCACCCGTTCTTGATGCCCAATCAATTGTCAGCAATGTCAAGGTTCTTTTTAAACATTTGCAAGAAAAGCTCCTTCTTACTGAGACAAAACTGAAGGAGTCACATTATCATTTACGACCTTGGAACTCAGAGTTGAATAACTCTAACATTCCCATGCAGTCACCATCTCATTCTGTTGGTGCCGTGTTGACAACTTCAAACAAAAATGGACTTGAACTGGTTCCTCAGCAAACATATTCTCAGGGAAAAGCACCCGTTTCTGCTTCTGATGTTCAGACTACCAGGGATTGGGATCTATTGGGTCGTGATCAGAGTGCTTTGGATGGTGTTGTCAATAGGAATGTGGAACCCAATGACCTGGGGAGGTATTCACCTTTTGCTAGCAGGAATTCTGCAGCACAAGATACACCTACTCAGCTTGATGTTACTCGAGGTGATGCACCAATAACTCGTTATAGTGAAGAAACCACCAATAAACAGGTCACATTTCGTGATCCTGTCAGGAACACAGAGCTTGATGATCAAGATCCTGAGGGAAGCCAAAATGAGAGAGAAATGGCAACCAATTGGAGTCCAGGAAACACTCCTTACACAACAACACCTGATGACCCCGGCTCTTCGTATCATAATTTTCTACCACCAGTTCTGGAAGAACCGTCTTCTTCATTTTCTGAGGCTGCAGAGGATGATCCATTACCAGCTATCGAGAACCTCCAAATTTCAGGAGAAGCTTTTCCGGGGAGAGAACTTCAAGCGTGCGGGTACTCTATCAATGGGACAACCAGTTGCAATTTTGAGTGGGTACGCCATATGGAAGATGGATCAGTTAATTATATTGAGGGAGCAAAGCAACCAAACTATCTAATTACTGCTGACGATGTTCATACATATCTTGCTATTGAAGTCCAGCCTCTCGATAACAGGAATCGCAAGGGAGAGCTTGTAAGGGTTTTTGCAAATGAGGACAGAAAGATTGTCTGTGATCCTGAAATGCAAGGTCAGATAGAGAAGAATTATTATCAAGGTCATTCTTCATTTAAAATCCATCAGCCGACAGGATATCTTGATATATGGGAACCTGCTATATTGACCATTAAGAAGGACAGTTACAGTATTAAGCGTACGGAACCCAGTGGTGCTGTAATCAATGAAAAGTTTTCGCCGACAACTAGTGTTGGAATTCCTTATGGAAGCCCTACAGAGTTCGTGCTAACTGGTTCTGGTGGTAGTCAGCATCTCTTAAAAGCAGACAATGACCAGGCAGATTATAGCTGTTCTAGAGATACGATTGTGCTCACATTGAGATCATTTATCCTAAGGGCTGTTGAGAGAAAGAAAAAGAAAAAGAAAGGAATTCTTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

786

Amino Acids

87.93

Weight (kDa)

5.2

Isoelectric Point (pI)

55.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IG_AIR9 PF23197 567 - 649 1.1e-07 AIR9 A9 domain
DUF7046 PF23080 680 - 782 9.2e-35 Domain of unknown function (DUF7046)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2083
AccB1I GGYRCC 2 cut(s) 62, 1175
AccB7I CCANNNNNTGG 1 cut(s) 1284
AccII CGCG 2 cut(s) 268, 294
AciI CCGC 6 cut(s) 60, 152, 266, 365, 527, 1755
AcsI RAATTY 6 cut(s) 23, 35, 1384, 1713, 2175, 2349
AcuI CTGAAG 2 cut(s) 191, 1109
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 6 cut(s) 381, 397, 986, 1760, 1800, 2119
AfiI CCNNNNNNNGG 2 cut(s) 335, 1284
AgeI ACCGGT 1 cut(s) 322
AgsI TTSAA 7 cut(s) 424, 622, 1132, 1194, 1211, 1748, 1898
AhlI ACTAGT 2 cut(s) 400, 2165
AjnI CCWGG 5 cut(s) 580, 1277, 1353, 1570, 2253
Alw21I GWGCWC 2 cut(s) 228, 2292
Alw26I GTCTC 2 cut(s) 549, 1073
Ama87I CYCGRG 2 cut(s) 472, 1425
AoxI GGCC 4 cut(s) 138, 156, 263, 822
ApeKI GCWGC 9 cut(s) 117, 149, 477, 520, 857, 967, 994, 1391, 1673
ApoI RAATTY 6 cut(s) 23, 35, 1384, 1713, 2175, 2349
AsiGI ACCGGT 1 cut(s) 322
Asp700I GAANNNNTTC 2 cut(s) 1215, 1728
AspLEI GCGC 3 cut(s) 65, 294, 804
AsuC2I CCSGG 4 cut(s) 43, 510, 1608, 1734
AsuHPI GGTGA 5 cut(s) 80, 549, 1149, 1359, 1442
AsuNHI GCTAGC 1 cut(s) 1376
AvaI CYCGRG 2 cut(s) 472, 1425
AxyI CCTNAGG 2 cut(s) 1527, 2312
BaeGI GKGCMC 1 cut(s) 259
BaeI ACNNNNGTAYC 4 cut(s) 387, 420, 2271, 2304
BanI GGYRCC 2 cut(s) 62, 1175
BanII GRGCYC 1 cut(s) 228
BarI GAAGNNNNNNTAC 4 cut(s) 756, 788, 2087, 2119
BbsI GAAGAC 1 cut(s) 1647
Bbv12I GWGCWC 2 cut(s) 228, 2292
BbvCI CCTCAGC 1 cut(s) 1221
BbvI GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
BccI CCATC 6 cut(s) 397, 568, 1168, 1313, 1808, 2049
BceAI ACGGC 2 cut(s) 125, 1163
BciT130I CCWGG 5 cut(s) 582, 1279, 1355, 1572, 2255
BclI TGATCA 3 cut(s) 829, 1303, 1516
BcnI CCSGG 4 cut(s) 43, 510, 1608, 1734
BcoDI GTCTC 2 cut(s) 549, 1073
BcuI ACTAGT 2 cut(s) 400, 2165
BfaI CTAG 5 cut(s) 401, 666, 1377, 2166, 2274
BfmI CTRYAG 3 cut(s) 1389, 1674, 2193
BfoI RGCGCY 1 cut(s) 66
BfuAI ACCTGC 1 cut(s) 2083
BmcAI AGTACT 1 cut(s) 986
Bme1390I CCNGG 9 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734, 2255
BmeT110I CYCGRG 2 cut(s) 472, 1425
BmiI GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
BmrFI CCNGG 9 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734, 2255
BmrI ACTGGG 1 cut(s) 2121
BmsI GCATC 8 cut(s) 427, 633, 844, 869, 919, 1000, 1423, 2239
BmtI GCTAGC 1 cut(s) 1380
BmuI ACTGGG 1 cut(s) 2121
BpiI GAAGAC 1 cut(s) 1647
BpmI CTGGAG 1 cut(s) 815
Bpu10I CCTNAGC 1 cut(s) 1221
BpuEI CTTGAG 1 cut(s) 242
BpuMI CCSGG 4 cut(s) 43, 510, 1608, 1734
BsaBI GATNNNNATC 2 cut(s) 1287, 1521
BsaHI GRCGYC 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 322
BsaXI ACNNNNNCTCC 2 cut(s) 1923, 1953
Bsc4I CCNNNNNNNGG 2 cut(s) 335, 1284
Bse118I RCCGGY 2 cut(s) 65, 322
Bse1I ACTGG 5 cut(s) 1218, 1637, 1779, 2127, 2215
Bse21I CCTNAGG 2 cut(s) 1527, 2312
Bse3DI GCAATG 3 cut(s) 784, 804, 1036
Bse8I GATNNNNATC 2 cut(s) 1287, 1521
BseBI CCWGG 5 cut(s) 582, 1279, 1355, 1572, 2255
BseGI GGATG 7 cut(s) 186, 560, 569, 934, 959, 1324, 1687
BseJI GATNNNNATC 2 cut(s) 1287, 1521
BseLI CCNNNNNNNGG 2 cut(s) 335, 1284
BseMI GCAATG 3 cut(s) 784, 804, 1036
BseMII CTCAG 9 cut(s) 192, 279, 1068, 1137, 1235, 1250, 1424, 1518, 1659
BseNI ACTGG 5 cut(s) 1218, 1637, 1779, 2127, 2215
BseRI GAGGAG 2 cut(s) 432, 460
BseSI GKGCMC 1 cut(s) 259
BseXI GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
Bsh1236I CGCG 2 cut(s) 268, 294
Bsh1285I CGRYCG 1 cut(s) 19
BshFI GGCC 4 cut(s) 140, 158, 265, 824
BshNI GGYRCC 2 cut(s) 62, 1175
BshTI ACCGGT 1 cut(s) 322
BsiEI CGRYCG 1 cut(s) 19
BsiHKAI GWGCWC 2 cut(s) 228, 2292
BsiHKCI CYCGRG 2 cut(s) 472, 1425
BsiSI CCGG 7 cut(s) 42, 57, 66, 323, 509, 1608, 1733
BsiWI CGTACG 1 cut(s) 2117
BslFI GGGAC 1 cut(s) 1786
BslI CCNNNNNNNGG 2 cut(s) 335, 1284
BsmAI GTCTC 2 cut(s) 549, 1073
BsmFI GGGAC 1 cut(s) 1786
BsnI GGCC 4 cut(s) 140, 158, 265, 824
BsoBI CYCGRG 2 cut(s) 472, 1425
Bsp1286I GDGCHC 3 cut(s) 228, 259, 2292
BspACI CCGC 6 cut(s) 60, 152, 266, 365, 527, 1755
BspANI GGCC 4 cut(s) 140, 158, 265, 824
BspCNI CTCAG 9 cut(s) 193, 280, 1069, 1136, 1234, 1249, 1423, 1519, 1660
BspFNI CGCG 2 cut(s) 268, 294
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
BspMAI CTGCAG 2 cut(s) 1393, 1678
BspMI ACCTGC 1 cut(s) 2083
BspOI GCTAGC 1 cut(s) 1380
BspQI GCTCTTC 1 cut(s) 1618
BspT107I GGYRCC 2 cut(s) 62, 1175
BsrDI GCAATG 3 cut(s) 784, 804, 1036
BsrFI RCCGGY 2 cut(s) 65, 322
BsrI ACTGG 5 cut(s) 1218, 1637, 1779, 2127, 2215
BssAI RCCGGY 2 cut(s) 65, 322
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
Bst2UI CCWGG 5 cut(s) 582, 1279, 1355, 1572, 2255
Bst4CI ACNGT 4 cut(s) 11, 1653, 2102, 2108
Bst6I CTCTTC 4 cut(s) 81, 174, 711, 1618
BstACI GRCGYC 1 cut(s) 63
BstC8I GCNNGC 5 cut(s) 48, 525, 538, 1378, 1753
BstDSI CCRYGG 1 cut(s) 141
BstF5I GGATG 7 cut(s) 186, 560, 569, 934, 959, 1324, 1687
BstFNI CGCG 2 cut(s) 268, 294
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 3 cut(s) 65, 294, 804
BstMAI GTCTC 2 cut(s) 549, 1073
BstMCI CGRYCG 1 cut(s) 19
BstMWI GCNNNNNNNGC 5 cut(s) 146, 155, 533, 866, 1063
BstNI CCWGG 5 cut(s) 582, 1279, 1355, 1572, 2255
BstNSI RCATGY 1 cut(s) 598
BstSCI CCNGG 9 cut(s) 41, 508, 580, 1277, 1353, 1570, 1606, 1732, 2253
BstSFI CTRYAG 3 cut(s) 1389, 1674, 2193
BstSLI GKGCMC 1 cut(s) 259
BstUI CGCG 2 cut(s) 268, 294
BstV1I GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
BstV2I GAAGAC 1 cut(s) 1647
BstX2I RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
BstXI CCANNNNNNTGG 1 cut(s) 1354
BstYI RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
Bsu36I CCTNAGG 2 cut(s) 1527, 2312
BsuRI GGCC 4 cut(s) 140, 158, 265, 824
BtgI CCRYGG 1 cut(s) 141
BtsCI GGATG 7 cut(s) 186, 560, 569, 934, 959, 1324, 1687
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 2 cut(s) 939, 2134
BveI ACCTGC 1 cut(s) 2083
Cac8I GCNNGC 5 cut(s) 48, 525, 538, 1378, 1753
CciI TCATGA 1 cut(s) 703
CfoI GCGC 3 cut(s) 65, 294, 804
Cfr10I RCCGGY 2 cut(s) 65, 322
CseI GACGC 2 cut(s) 283, 806
Csp6I GTAC 6 cut(s) 380, 396, 985, 1759, 1799, 2118
CspAI ACCGGT 1 cut(s) 322
CviAII CATG 4 cut(s) 595, 704, 710, 1150
CviQI GTAC 6 cut(s) 380, 396, 985, 1759, 1799, 2118
DinI GGCGCC 1 cut(s) 64
DraI TTTAAA 2 cut(s) 1048, 2035
Eam1104I CTCTTC 4 cut(s) 81, 174, 711, 1618
EarI CTCTTC 4 cut(s) 81, 174, 711, 1618
Ecl136II GAGCTC 1 cut(s) 226
Eco130I CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
Eco24I GRGCYC 1 cut(s) 228
Eco32I GATATC 1 cut(s) 2057
Eco53kI GAGCTC 1 cut(s) 226
Eco57I CTGAAG 2 cut(s) 191, 1109
Eco81I CCTNAGG 2 cut(s) 1527, 2312
Eco88I CYCGRG 2 cut(s) 472, 1425
EcoICRI GAGCTC 1 cut(s) 226
EcoRI GAATTC 3 cut(s) 1384, 2175, 2349
EcoRII CCWGG 5 cut(s) 580, 1277, 1353, 1570, 2253
EcoRV GATATC 1 cut(s) 2057
EcoT14I CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
EcoT38I GRGCYC 1 cut(s) 228
EgeI GGCGCC 1 cut(s) 64
EheI GGCGCC 1 cut(s) 64
ErhI CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
FaeI CATG 4 cut(s) 598, 707, 713, 1153
FalI AAGNNNNNCTT 1 cut(s) 2337
FaqI GGGAC 1 cut(s) 1786
FatI CATG 4 cut(s) 594, 703, 709, 1149
FauI CCCGC 1 cut(s) 1748
FauNDI CATATG 2 cut(s) 916, 1806
FbaI TGATCA 3 cut(s) 829, 1303, 1516
FokI GGATG 7 cut(s) 173, 547, 556, 941, 946, 1331, 1694
FriOI GRGCYC 1 cut(s) 228
FspBI CTAG 5 cut(s) 401, 666, 1377, 2166, 2274
GlaI GCGC 3 cut(s) 64, 293, 803
GsuI CTGGAG 1 cut(s) 815
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 4 cut(s) 140, 158, 265, 824
HapII CCGG 7 cut(s) 42, 57, 66, 323, 509, 1608, 1733
HgaI GACGC 2 cut(s) 283, 806
HhaI GCGC 3 cut(s) 65, 294, 804
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 4 cut(s) 598, 707, 713, 1153
Hin6I GCGC 3 cut(s) 63, 292, 802
HinP1I GCGC 3 cut(s) 63, 292, 802
HincII GTYRAC 1 cut(s) 1185
HindII GTYRAC 1 cut(s) 1185
HindIII AAGCTT 1 cut(s) 1725
HinfI GANTC 6 cut(s) 217, 248, 700, 1094, 1567, 1921
HpaII CCGG 7 cut(s) 42, 57, 66, 323, 509, 1608, 1733
HphI GGTGA 5 cut(s) 80, 549, 1149, 1359, 1442
Hpy166II GTNNAC 2 cut(s) 398, 1185
Hpy8I GTNNAC 2 cut(s) 398, 1185
HpyAV CCTTC 7 cut(s) 130, 493, 579, 583, 1079, 1084, 2089
HpyCH4III ACNGT 4 cut(s) 11, 1653, 2102, 2108
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 155, 533, 866, 1063
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 4 cut(s) 598, 707, 713, 1153
HspAI GCGC 3 cut(s) 63, 292, 802
KasI GGCGCC 1 cut(s) 62
Ksp22I TGATCA 3 cut(s) 829, 1303, 1516
LguI GCTCTTC 1 cut(s) 1618
LmnI GCTCC 4 cut(s) 86, 445, 1071, 1838
Lsp1109I GCAGC 9 cut(s) 129, 136, 489, 532, 844, 954, 1006, 1403, 1660
LweI GCATC 8 cut(s) 427, 633, 844, 869, 919, 1000, 1423, 2239
MaeI CTAG 5 cut(s) 401, 666, 1377, 2166, 2274
MaeIII GTNAC 7 cut(s) 11, 921, 1095, 1155, 1420, 1477, 2102
MfeI CAATTG 2 cut(s) 1020, 1561
MflI RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
MhlI GDGCHC 3 cut(s) 228, 259, 2292
Mly113I GGCGCC 1 cut(s) 63
MlyI GAGTC 2 cut(s) 1103, 1576
MmeI TCCRAC 1 cut(s) 2152
MroXI GAANNNNTTC 2 cut(s) 1215, 1728
MslI CAYNNNNRTG 2 cut(s) 708, 1148
MspI CCGG 7 cut(s) 42, 57, 66, 323, 509, 1608, 1733
MspR9I CCNGG 9 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734, 2255
MunI CAATTG 2 cut(s) 1020, 1561
MvaI CCWGG 5 cut(s) 582, 1279, 1355, 1572, 2255
MvnI CGCG 2 cut(s) 268, 294
MwoI GCNNNNNNNGC 5 cut(s) 146, 155, 533, 866, 1063
NarI GGCGCC 1 cut(s) 63
NciI CCSGG 4 cut(s) 43, 510, 1608, 1734
NdeI CATATG 2 cut(s) 916, 1806
NheI GCTAGC 1 cut(s) 1376
NlaIII CATG 4 cut(s) 598, 707, 713, 1153
NlaIV GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
NmuCI GTSAC 3 cut(s) 1095, 1155, 1477
NspI RCATGY 1 cut(s) 598
PaeR7I CTCGAG 2 cut(s) 472, 1425
PagI TCATGA 1 cut(s) 703
PciSI GCTCTTC 1 cut(s) 1618
PdmI GAANNNNTTC 2 cut(s) 1215, 1728
PfeI GAWTC 4 cut(s) 217, 248, 700, 1921
Pfl23II CGTACG 1 cut(s) 2117
PflMI CCANNNNNTGG 1 cut(s) 1284
PfoI TCCNGGA 2 cut(s) 580, 1570
PinAI ACCGGT 1 cut(s) 322
Ple19I CGATCG 1 cut(s) 19
PleI GAGTC 2 cut(s) 1102, 1575
PluTI GGCGCC 1 cut(s) 66
PpsI GAGTC 2 cut(s) 1102, 1575
Psp124BI GAGCTC 1 cut(s) 228
Psp6I CCWGG 5 cut(s) 580, 1277, 1353, 1570, 2253
PspGI CCWGG 5 cut(s) 580, 1277, 1353, 1570, 2253
PspLI CGTACG 1 cut(s) 2117
PspN4I GGNNCC 7 cut(s) 64, 327, 1177, 1218, 1344, 2073, 2124
PspXI VCTCGAGB 2 cut(s) 472, 1425
PstI CTGCAG 2 cut(s) 1393, 1678
PsuI RGATCY 5 cut(s) 302, 685, 844, 1288, 1522
PvuI CGATCG 1 cut(s) 19
RsaI GTAC 6 cut(s) 381, 397, 986, 1760, 1800, 2119
RsaNI GTAC 6 cut(s) 380, 396, 985, 1759, 1799, 2118
RseI CAYNNNNRTG 2 cut(s) 708, 1148
SacI GAGCTC 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 1618
ScaI AGTACT 1 cut(s) 986
SchI GAGTC 2 cut(s) 1103, 1576
ScrFI CCNGG 9 cut(s) 43, 510, 582, 1279, 1355, 1572, 1608, 1734, 2255
SduI GDGCHC 3 cut(s) 228, 259, 2292
SfaNI GCATC 8 cut(s) 427, 633, 844, 869, 919, 1000, 1423, 2239
SfcI CTRYAG 3 cut(s) 1389, 1674, 2193
SfoI GGCGCC 1 cut(s) 64
Sfr274I CTCGAG 2 cut(s) 472, 1425
SgrAI CRCCGGYG 1 cut(s) 65
SlaI CTCGAG 2 cut(s) 472, 1425
SmiMI CAYNNNNRTG 2 cut(s) 708, 1148
SmlI CTYRAG 3 cut(s) 221, 472, 1425
SmoI CTYRAG 3 cut(s) 221, 472, 1425
SpeI ACTAGT 2 cut(s) 400, 2165
SsiI CCGC 6 cut(s) 60, 152, 266, 365, 527, 1755
SspDI GGCGCC 1 cut(s) 62
SspMI CTAG 5 cut(s) 401, 666, 1377, 2166, 2274
SstI GAGCTC 1 cut(s) 228
StyD4I CCNGG 9 cut(s) 41, 508, 580, 1277, 1353, 1570, 1606, 1732, 2253
StyI CCWWGG 5 cut(s) 281, 298, 428, 614, 1115
TaaI ACNGT 4 cut(s) 11, 1653, 2102, 2108
TaqI TCGA 7 cut(s) 228, 473, 863, 947, 1426, 1701, 1911
TatI WGTACW 2 cut(s) 379, 984
TauI GCSGC 2 cut(s) 63, 268
TfiI GAWTC 4 cut(s) 217, 248, 700, 1921
TscAI CASTG 2 cut(s) 939, 2134
TseFI GTSAC 3 cut(s) 1095, 1155, 1477
TseI GCWGC 9 cut(s) 117, 149, 477, 520, 857, 967, 994, 1391, 1673
Tsp45I GTSAC 3 cut(s) 1095, 1155, 1477
TspGWI ACGGA 3 cut(s) 745, 748, 2135
TspRI CASTG 2 cut(s) 939, 2134
Van91I CCANNNNNTGG 1 cut(s) 1284
XapI RAATTY 6 cut(s) 23, 35, 1384, 1713, 2175, 2349
XbaI TCTAGA 1 cut(s) 2273
XceI RCATGY 1 cut(s) 598
XcmI CCANNNNNNNNNTGG 1 cut(s) 1811
XhoI CTCGAG 2 cut(s) 472, 1425
XmnI GAANNNNTTC 2 cut(s) 1215, 1728
XspI CTAG 5 cut(s) 401, 666, 1377, 2166, 2274
ZrmI AGTACT 1 cut(s) 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.