Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001142

Physical Location & Seq

Genomic Coordinates Forward (+)

19673992 .. 19675557

Gene Structure 1566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0216200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGAAGAAATCGACGTTCCATCATTCTTTATCTGCCCAATTTCTCTGCAAATCATGAAAGATCCCGTGACCATCTCGACGGGGATAACCTACGACAGGGAGAGCATCGAGAAGTGGCTGTTCTCCAGCAAGAACAACACCTGCCCCGTAACGAAACAAGTAGTTTCCGACCCCGACTTAACCCCCAACCACACTCTCCGGCGGTTGCTCCAAGCTTGGTGCACGCTCAACGCTTCTCACGGCGTCGAAAGAATCCCAACTCCAAAGCCTCCCGTCAGCAAAGCTCAAATCTCCAAGTTATTAAACGACGCCCCGAAGTCGCCACAGTCCATCACAAAATGCCTCCGCAGGCTTAGATCCATCGCCTCCGAGAGCGAGGCCAACAAAAGATCCATGGAATCCGTCGGCGCAGTTGAGTTCTTGGCTTCGATACTCCTTAAAGGAGATAATGAACAGCAGGCAGAAGCACTGAGCGTCCTCTACAATCTCCAAGTCTCGGAATCCGCACTCCGGAGTCTTCTAGGCAAAGAGAGCGAGCTCATCGAGTCGTTGGTGAAGCTCATCCAAAGCAGCACCTACGAGTCGAGAGCTTACGCCGTAATAATGCTGAGATCGATGTTCGAAGTCGCCGATACAATGAAGATGATCAACTTGAGACCCGAGTTCTTCTCCGGAGTACTCCAGGTCTTGAGAGATCAGATTTCCCAGCAGGCCTCAAAAGCCACATTGCAACTGTTGATCAAGGTCTGTCCTTGGGGGAGAAACCGAATCAAGGCCGTGGAAGCCGGAGCCGTTAATGTCTTGATCGAGCTCCTTCTGGATGCTTCTCCGGACAGAAGGACTCACGAGATGGCAATGATGGTGCTCGACATGGTGTGTAGCTCGGCCGAGGGCCGAGCCGAGCTCCTCAAGCATGGGGCTGGGCTTGCAGTGGTTTCGAAGAAGATAATGAGGGTTTCGAAGGCGGCAAGCGAGAGGGCGGTGAGGATTCTGTTCTCGATTTGCAAATTCTCCGCGACGACCAATGTTTTGCAAGAAATGCTGCAGCTGGGTGTGGTGGCAAAGCTTTGCTTGGTGCTTCAAGTGGACAGTGGGAGCAAGACCAAGGAAAAGGCTCAAGAGATCTTGAAAATGCATGCAAAGACATGGAGGAACTCTACTTGTATACCAAAAAATTTGATTTCTTCTTATCCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

399

Amino Acids

44.23

Weight (kDa)

9.19

Isoelectric Point (pI)

57.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	6 - 75	3.1e-19	U-box domain
ARM_PUB	PF25598	97 - 397	1.8e-86	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08440 AT5G08440 AT5G08440 AT5G23490 AT5G23490 AT5G23490 AT5G23490 AT5G23510 AT5G23510 AT5G23510
fragaria_vesca	FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_3g21410 FvH4_7g23540
malus_domestica	MD03G1185400.v1.1 MD04G1186900.v1.1 MD11G1230900.v1.1
prunus_persica	Prupe.4G196300_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1
pyrus_communis	pycom03g16520 pycom03g16530
rosa_chinensis	RchiOBHm_Chr1g0368691 RchiOBHm_Chr3g0485101 RchiOBHm_Chr5g0036791
rosa_laevigata	RLG00000023166 RLG00000027197 RLG00000033721
rosa_multiflora	Rmu_co8159396.1_g000001 Rmu_sc0000399.1_g000002 Rmu_sc0006040.1_g000006 Rmu_sc0006040.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044160 Rroxscaffold_4G00288350 Rroxscaffold_6G00397190
rosa_rugosa	Rorug01G0343700 Rorug03G0216200 Rorug03G0216300
rosa_samantha	Rh3AG266300 Rh3BG301700 Rh3CG300000 Rh3DG295800 Rh5AG250300 Rh5BG252000 Rh5CG284000 Rh5DG260300
rosa_wichuraiana	Rw5G023020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	149
Acc36I	ACCTGC	1 cut(s)	149
AccI	GTMKAC	1 cut(s)	1165
AccII	CGCG	1 cut(s)	1016
AccIII	TCCGGA	3 cut(s)	510, 671, 829
AciI	CCGC	6 cut(s)	202, 346, 504, 965, 980, 1014
AclWI	GGATC	3 cut(s)	56, 351, 384
AcoI	YGGCCR	1 cut(s)	885
AcsI	RAATTY	2 cut(s)	1007, 1174
AcyI	GRCGYC	2 cut(s)	243, 309
AfaI	GTAC	1 cut(s)	678
AfiI	CCNNNNNNNGG	4 cut(s)	96, 496, 510, 772
AgsI	TTSAA	2 cut(s)	1082, 1129
AjnI	CCWGG	1 cut(s)	681
Alw21I	GWGCWC	5 cut(s)	224, 540, 813, 867, 906
Alw26I	GTCTC	2 cut(s)	499, 649
Alw44I	GTGCAC	1 cut(s)	220
AlwI	GGATC	3 cut(s)	56, 351, 384
Ama87I	CYCGRG	1 cut(s)	659
Aor13HI	TCCGGA	3 cut(s)	510, 671, 829
AoxI	GGCC	5 cut(s)	378, 711, 774, 885, 892
ApaLI	GTGCAC	1 cut(s)	220
ApeKI	GCWGC	3 cut(s)	570, 1042, 1045
ApoI	RAATTY	2 cut(s)	1007, 1174
ArsI	GACNNNNNNTTYG	2 cut(s)	1012, 1044
AspLEI	GCGC	1 cut(s)	410
AspS9I	GGNCC	1 cut(s)	892
AsuHPI	GGTGA	2 cut(s)	565, 994
AsuII	TTCGAA	3 cut(s)	621, 938, 959
AvaI	CYCGRG	1 cut(s)	659
BaeGI	GKGCMC	1 cut(s)	224
BanII	GRGCYC	3 cut(s)	540, 813, 906
BauI	CACGAG	1 cut(s)	845
BbsI	GAAGAC	1 cut(s)	509
Bbv12I	GWGCWC	5 cut(s)	224, 540, 813, 867, 906
BbvI	GCAGC	3 cut(s)	582, 1029, 1057
BccI	CCATC	6 cut(s)	28, 80, 338, 368, 844, 853
BceAI	ACGGC	4 cut(s)	256, 581, 761, 776
BcgI	CGANNNNNNTGC	2 cut(s)	918, 952
BciT130I	CCWGG	1 cut(s)	683
BclI	TGATCA	2 cut(s)	645, 738
BcoDI	GTCTC	2 cut(s)	499, 649
BfaI	CTAG	1 cut(s)	521
BfmI	CTRYAG	1 cut(s)	1043
BfuAI	ACCTGC	1 cut(s)	149
BglII	AGATCT	1 cut(s)	1122
BisI	GCNGC	4 cut(s)	571, 966, 1043, 1046
BlsI	GCNGC	4 cut(s)	572, 967, 1044, 1047
BmcAI	AGTACT	1 cut(s)	678
Bme1390I	CCNGG	1 cut(s)	683
BmeT110I	CYCGRG	1 cut(s)	659
BmgT120I	GGNCC	1 cut(s)	892
BmiI	GGNNCC	1 cut(s)	790
BmrFI	CCNGG	1 cut(s)	683
BmsI	GCATC	2 cut(s)	114, 811
BpiI	GAAGAC	1 cut(s)	509
BplI	GAGNNNNNCTC	4 cut(s)	653, 685, 888, 920
BpmI	CTGGAG	2 cut(s)	109, 665
Bpu14I	TTCGAA	3 cut(s)	621, 938, 959
BpuEI	CTTGAG	4 cut(s)	673, 709, 893, 1101
Bsa29I	ATCGAT	1 cut(s)	614
BsaHI	GRCGYC	2 cut(s)	243, 309
BsaI	GGTCTC	1 cut(s)	649
BsaJI	CCNNGG	5 cut(s)	393, 752, 777, 888, 1104
BsaWI	WCCGGW	3 cut(s)	510, 671, 829
Bsc4I	CCNNNNNNNGG	4 cut(s)	96, 496, 510, 772
Bse3DI	GCAATG	2 cut(s)	725, 861
BseAI	TCCGGA	3 cut(s)	510, 671, 829
BseBI	CCWGG	1 cut(s)	683
BseCI	ATCGAT	1 cut(s)	614
BseDI	CCNNGG	5 cut(s)	393, 752, 777, 888, 1104
BseGI	GGATG	2 cut(s)	561, 826
BseLI	CCNNNNNNNGG	4 cut(s)	96, 496, 510, 772
BseMI	GCAATG	2 cut(s)	725, 861
BseMII	CTCAG	2 cut(s)	461, 599
BseRI	GAGGAG	1 cut(s)	896
BseSI	GKGCMC	1 cut(s)	224
BseX3I	CGGCCG	1 cut(s)	885
BseXI	GCAGC	3 cut(s)	582, 1029, 1057
BseYI	CCCAGC	3 cut(s)	705, 920, 1048
Bsh1236I	CGCG	1 cut(s)	1016
Bsh1285I	CGRYCG	1 cut(s)	888
BshFI	GGCC	5 cut(s)	380, 713, 776, 887, 894
BshVI	ATCGAT	1 cut(s)	614
BsiEI	CGRYCG	1 cut(s)	888
BsiHKAI	GWGCWC	5 cut(s)	224, 540, 813, 867, 906
BsiHKCI	CYCGRG	1 cut(s)	659
BsiSI	CCGG	5 cut(s)	199, 511, 672, 786, 830
BslI	CCNNNNNNNGG	4 cut(s)	96, 496, 510, 772
BsmAI	GTCTC	2 cut(s)	499, 649
BsnI	GGCC	5 cut(s)	380, 713, 776, 887, 894
Bso31I	GGTCTC	1 cut(s)	649
BsoBI	CYCGRG	1 cut(s)	659
Bsp119I	TTCGAA	3 cut(s)	621, 938, 959
Bsp1286I	GDGCHC	5 cut(s)	224, 540, 813, 867, 906
Bsp13I	TCCGGA	3 cut(s)	510, 671, 829
Bsp143I	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
Bsp19I	CCATGG	1 cut(s)	393
BspACI	CCGC	6 cut(s)	202, 346, 504, 965, 980, 1014
BspANI	GGCC	5 cut(s)	380, 713, 776, 887, 894
BspCNI	CTCAG	2 cut(s)	462, 600
BspDI	ATCGAT	1 cut(s)	614
BspEI	TCCGGA	3 cut(s)	510, 671, 829
BspFNI	CGCG	1 cut(s)	1016
BspHI	TCATGA	1 cut(s)	54
BspLI	GGNNCC	1 cut(s)	790
BspMAI	CTGCAG	1 cut(s)	1047
BspMI	ACCTGC	1 cut(s)	149
BspPI	GGATC	3 cut(s)	56, 351, 384
BspT104I	TTCGAA	3 cut(s)	621, 938, 959
BspTNI	GGTCTC	1 cut(s)	649
BsrDI	GCAATG	2 cut(s)	725, 861
BssECI	CCNNGG	5 cut(s)	393, 752, 777, 888, 1104
BssMI	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
BssNAI	GTATAC	1 cut(s)	1166
BssNI	GRCGYC	2 cut(s)	243, 309
BssSI	CACGAG	1 cut(s)	845
BssT1I	CCWWGG	3 cut(s)	393, 752, 1104
Bst1107I	GTATAC	1 cut(s)	1166
Bst2BI	CACGAG	1 cut(s)	845
Bst2UI	CCWGG	1 cut(s)	683
Bst4CI	ACNGT	3 cut(s)	327, 735, 1091
BstACI	GRCGYC	2 cut(s)	243, 309
BstAPI	GCANNNNNTGC	1 cut(s)	1039
BstBI	TTCGAA	3 cut(s)	621, 938, 959
BstC8I	GCNNGC	8 cut(s)	224, 350, 459, 536, 711, 927, 970, 1137
BstDEI	CTNAG	3 cut(s)	353, 470, 608
BstDSI	CCRYGG	2 cut(s)	393, 777
BstENI	CCTNNNNNAGG	1 cut(s)	94
BstF5I	GGATG	2 cut(s)	561, 826
BstFNI	CGCG	1 cut(s)	1016
BstHHI	GCGC	1 cut(s)	410
BstKTI	GATC	9 cut(s)	64, 359, 392, 614, 648, 697, 741, 807, 1125
BstMAI	GTCTC	2 cut(s)	499, 649
BstMBI	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
BstMCI	CGRYCG	1 cut(s)	888
BstMWI	GCNNNNNNNGC	6 cut(s)	531, 719, 782, 910, 926, 1039
BstNI	CCWGG	1 cut(s)	683
BstNSI	RCATGY	1 cut(s)	1139
BstSCI	CCNGG	1 cut(s)	681
BstSFI	CTRYAG	1 cut(s)	1043
BstSLI	GKGCMC	1 cut(s)	224
BstUI	CGCG	1 cut(s)	1016
BstV1I	GCAGC	3 cut(s)	582, 1029, 1057
BstV2I	GAAGAC	1 cut(s)	509
BstX2I	RGATCY	4 cut(s)	61, 356, 389, 1122
BstYI	RGATCY	4 cut(s)	61, 356, 389, 1122
BstZ17I	GTATAC	1 cut(s)	1166
BstZI	CGGCCG	1 cut(s)	885
Bsu15I	ATCGAT	1 cut(s)	614
BsuRI	GGCC	5 cut(s)	380, 713, 776, 887, 894
BsuTUI	ATCGAT	1 cut(s)	614
BtgI	CCRYGG	2 cut(s)	393, 777
BtgZI	GCGATG	1 cut(s)	346
BtsCI	GGATG	2 cut(s)	561, 826
BtsI	GCAGTG	1 cut(s)	936
BtsIMutI	CAGTG	3 cut(s)	467, 936, 1096
BveI	ACCTGC	1 cut(s)	149
Cac8I	GCNNGC	8 cut(s)	224, 350, 459, 536, 711, 927, 970, 1137
CciI	TCATGA	1 cut(s)	54
CfoI	GCGC	1 cut(s)	410
Cfr13I	GGNCC	1 cut(s)	892
ClaI	ATCGAT	1 cut(s)	614
CseI	GACGC	3 cut(s)	232, 317, 463
Csp6I	GTAC	1 cut(s)	677
CviAII	CATG	6 cut(s)	55, 394, 871, 914, 1136, 1146
CviQI	GTAC	1 cut(s)	677
DdeI	CTNAG	3 cut(s)	353, 470, 608
DpnI	GATC	9 cut(s)	63, 358, 391, 613, 647, 696, 740, 806, 1124
DpnII	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
EaeI	YGGCCR	1 cut(s)	885
EagI	CGGCCG	1 cut(s)	885
Ecl136II	GAGCTC	3 cut(s)	538, 811, 904
EclXI	CGGCCG	1 cut(s)	885
Eco130I	CCWWGG	3 cut(s)	393, 752, 1104
Eco147I	AGGCCT	1 cut(s)	713
Eco24I	GRGCYC	3 cut(s)	540, 813, 906
Eco31I	GGTCTC	1 cut(s)	649
Eco52I	CGGCCG	1 cut(s)	885
Eco53kI	GAGCTC	3 cut(s)	538, 811, 904
Eco88I	CYCGRG	1 cut(s)	659
EcoICRI	GAGCTC	3 cut(s)	538, 811, 904
EcoNI	CCTNNNNNAGG	1 cut(s)	94
EcoRII	CCWGG	1 cut(s)	681
EcoT14I	CCWWGG	3 cut(s)	393, 752, 1104
EcoT22I	ATGCAT	1 cut(s)	1137
EcoT38I	GRGCYC	3 cut(s)	540, 813, 906
ErhI	CCWWGG	3 cut(s)	393, 752, 1104
FaeI	CATG	6 cut(s)	58, 397, 874, 917, 1139, 1149
FaiI	YATR	7 cut(s)	56, 395, 872, 915, 1137, 1147, 1166
FalI	AAGNNNNNCTT	2 cut(s)	1055, 1087
FatI	CATG	6 cut(s)	54, 393, 870, 913, 1135, 1145
FbaI	TGATCA	2 cut(s)	645, 738
FblI	GTMKAC	1 cut(s)	1165
Fnu4HI	GCNGC	4 cut(s)	571, 966, 1043, 1046
FokI	GGATG	2 cut(s)	548, 833
FriOI	GRGCYC	3 cut(s)	540, 813, 906
Fsp4HI	GCNGC	4 cut(s)	571, 966, 1043, 1046
FspBI	CTAG	1 cut(s)	521
GlaI	GCGC	1 cut(s)	409
GluI	GCNGC	4 cut(s)	571, 966, 1043, 1046
GsaI	CCCAGC	3 cut(s)	709, 924, 1052
GsuI	CTGGAG	2 cut(s)	109, 665
HaeIII	GGCC	5 cut(s)	380, 713, 776, 887, 894
HapII	CCGG	5 cut(s)	199, 511, 672, 786, 830
HgaI	GACGC	3 cut(s)	232, 317, 463
HhaI	GCGC	1 cut(s)	410
Hin1I	GRCGYC	2 cut(s)	243, 309
Hin1II	CATG	6 cut(s)	58, 397, 874, 917, 1139, 1149
Hin6I	GCGC	1 cut(s)	408
HinP1I	GCGC	1 cut(s)	408
HindIII	AAGCTT	2 cut(s)	213, 1064
HinfI	GANTC	9 cut(s)	252, 398, 500, 514, 545, 581, 768, 841, 988
HpaII	CCGG	5 cut(s)	199, 511, 672, 786, 830
HphI	GGTGA	2 cut(s)	565, 994
Hpy166II	GTNNAC	3 cut(s)	222, 1087, 1166
Hpy188I	TCNGA	4 cut(s)	169, 370, 499, 699
Hpy8I	GTNNAC	3 cut(s)	222, 1087, 1166
Hpy99I	CGWCG	6 cut(s)	17, 82, 248, 311, 407, 1021
HpyAV	CCTTC	3 cut(s)	824, 831, 955
HpyCH4III	ACNGT	3 cut(s)	327, 735, 1091
HpyCH4IV	ACGT	1 cut(s)	15
HpyCH4V	TGCA	9 cut(s)	49, 222, 730, 929, 1005, 1033, 1045, 1135, 1139
HpyF10VI	GCNNNNNNNGC	6 cut(s)	531, 719, 782, 910, 926, 1039
HpyF3I	CTNAG	3 cut(s)	353, 470, 608
HpySE526I	ACGT	1 cut(s)	15
Hsp92I	GRCGYC	2 cut(s)	243, 309
Hsp92II	CATG	6 cut(s)	58, 397, 874, 917, 1139, 1149
HspAI	GCGC	1 cut(s)	408
Kpn2I	TCCGGA	3 cut(s)	510, 671, 829
Ksp22I	TGATCA	2 cut(s)	645, 738
Kzo9I	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
LmnI	GCTCC	5 cut(s)	213, 788, 816, 909, 1095
Lsp1109I	GCAGC	3 cut(s)	582, 1029, 1057
LweI	GCATC	2 cut(s)	114, 811
MaeI	CTAG	1 cut(s)	521
MaeII	ACGT	1 cut(s)	15
MaeIII	GTNAC	2 cut(s)	67, 148
MalI	GATC	9 cut(s)	63, 358, 391, 613, 647, 696, 740, 806, 1124
MboI	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
MboII	GAAGA	7 cut(s)	17, 509, 652, 658, 952, 955, 1176
MflI	RGATCY	4 cut(s)	61, 356, 389, 1122
MhlI	GDGCHC	5 cut(s)	224, 540, 813, 867, 906
MluCI	AATT	3 cut(s)	39, 1007, 1174
MlyI	GAGTC	4 cut(s)	523, 554, 590, 835
MmeI	TCCRAC	1 cut(s)	192
Mph1103I	ATGCAT	1 cut(s)	1137
MroI	TCCGGA	3 cut(s)	510, 671, 829
MseI	TTAA	4 cut(s)	179, 302, 438, 795
MspA1I	CMGCKG	1 cut(s)	1048
MspI	CCGG	5 cut(s)	199, 511, 672, 786, 830
MspR9I	CCNGG	1 cut(s)	683
MvaI	CCWGG	1 cut(s)	683
MvnI	CGCG	1 cut(s)	1016
MwoI	GCNNNNNNNGC	6 cut(s)	531, 719, 782, 910, 926, 1039
NcoI	CCATGG	1 cut(s)	393
NdeII	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
NlaIII	CATG	6 cut(s)	58, 397, 874, 917, 1139, 1149
NlaIV	GGNNCC	1 cut(s)	790
NmeAIII	GCCGAG	4 cut(s)	863, 913, 920, 925
NmuCI	GTSAC	1 cut(s)	67
NsiI	ATGCAT	1 cut(s)	1137
NspI	RCATGY	1 cut(s)	1139
NspV	TTCGAA	3 cut(s)	621, 938, 959
PaeI	GCATGC	1 cut(s)	1139
PagI	TCATGA	1 cut(s)	54
PaqCI	CACCTGC	1 cut(s)	149
PceI	AGGCCT	1 cut(s)	713
PcsI	WCGNNNNNNNCGW	1 cut(s)	627
PfeI	GAWTC	5 cut(s)	252, 398, 500, 768, 988
PkrI	GCNGC	4 cut(s)	572, 967, 1044, 1047
PleI	GAGTC	4 cut(s)	522, 553, 589, 835
PpsI	GAGTC	4 cut(s)	522, 553, 589, 835
Psp124BI	GAGCTC	3 cut(s)	540, 813, 906
Psp6I	CCWGG	1 cut(s)	681
PspFI	CCCAGC	3 cut(s)	705, 920, 1048
PspGI	CCWGG	1 cut(s)	681
PspN4I	GGNNCC	1 cut(s)	790
PspPI	GGNCC	1 cut(s)	892
PstI	CTGCAG	1 cut(s)	1047
PsuI	RGATCY	4 cut(s)	61, 356, 389, 1122
PvuII	CAGCTG	1 cut(s)	1048
RsaI	GTAC	1 cut(s)	678
RsaNI	GTAC	1 cut(s)	677
SacI	GAGCTC	3 cut(s)	540, 813, 906
SaqAI	TTAA	4 cut(s)	179, 302, 438, 795
SatI	GCNGC	4 cut(s)	571, 966, 1043, 1046
Sau3AI	GATC	9 cut(s)	61, 356, 389, 611, 645, 694, 738, 804, 1122
Sau96I	GGNCC	1 cut(s)	892
ScaI	AGTACT	1 cut(s)	678
SchI	GAGTC	4 cut(s)	523, 554, 590, 835
ScrFI	CCNGG	1 cut(s)	683
SduI	GDGCHC	5 cut(s)	224, 540, 813, 867, 906
SfaNI	GCATC	2 cut(s)	114, 811
SfcI	CTRYAG	1 cut(s)	1043
SfuI	TTCGAA	3 cut(s)	621, 938, 959
SmlI	CTYRAG	4 cut(s)	652, 688, 908, 1116
SmoI	CTYRAG	4 cut(s)	652, 688, 908, 1116
SphI	GCATGC	1 cut(s)	1139
Sse9I	AATT	3 cut(s)	39, 1007, 1174
SseBI	AGGCCT	1 cut(s)	713
SsiI	CCGC	6 cut(s)	202, 346, 504, 965, 980, 1014
SspMI	CTAG	1 cut(s)	521
SstI	GAGCTC	3 cut(s)	540, 813, 906
StuI	AGGCCT	1 cut(s)	713
StyD4I	CCNGG	1 cut(s)	681
StyI	CCWWGG	3 cut(s)	393, 752, 1104
TaaI	ACNGT	3 cut(s)	327, 735, 1091
TaiI	ACGT	1 cut(s)	18
TasI	AATT	3 cut(s)	39, 1007, 1174
TatI	WGTACW	1 cut(s)	676
TauI	GCSGC	1 cut(s)	968
TfiI	GAWTC	5 cut(s)	252, 398, 500, 768, 988
Tru1I	TTAA	4 cut(s)	179, 302, 438, 795
Tru9I	TTAA	4 cut(s)	179, 302, 438, 795
TscAI	CASTG	3 cut(s)	474, 936, 1096
TseFI	GTSAC	1 cut(s)	67
TseI	GCWGC	3 cut(s)	570, 1042, 1045
Tsp45I	GTSAC	1 cut(s)	67
TspDTI	ATGAA	3 cut(s)	71, 465, 653
TspGWI	ACGGA	1 cut(s)	391
TspRI	CASTG	3 cut(s)	474, 936, 1096
VneI	GTGCAC	1 cut(s)	220
XagI	CCTNNNNNAGG	1 cut(s)	94
XapI	RAATTY	2 cut(s)	1007, 1174
XceI	RCATGY	1 cut(s)	1139
XmiI	GTMKAC	1 cut(s)	1165
XspI	CTAG	1 cut(s)	521
ZrmI	AGTACT	1 cut(s)	678
Zsp2I	ATGCAT	1 cut(s)	1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.