Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001142

Physical Location & Seq

Genomic Coordinates Reverse (-)

32384053 .. 32386136

Gene Structure 2084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G023020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGAGAACGGACTCGATTGGAGAATTGCGGAGAAATTTTCAGGGTTGACGAGGACTACCAGCCCTGATCCTAGTCGGTCCTCCGAAACCGACGACATTGGCTTGTTCCAGGTCATGAAGGCCGTTGAAGCTGCCGAGGCCACCATCAAGAGACAGGTCGAGGAGAACATCCGCTTGAGGTCTGAGCTCGAATACAAGACTCTCGAGCTCCACAGACGTAAACAACTCCACGAACCATCATCGATGGCGCCGCTGTCGTCGTCTCTCGATCTGGTAGGATCGGCTCGTCCGGAAGTGAACAATTCAGGAGATAATCAACAAGCTGGGGCGCCCAATTCCGATAATGGGGGATACAGCACGGAAGGGGAATATTATGATCCGCCGCGGGTGAATTCCGGGGAAGGGTTGATGCGATTGGATCATCCCGGCGAGAACAATCTTGTGATCAAGATTCATGAAAATGAGCGGGAGATCATGCAATTGCGGAAGCAGCTGGGGGATTACTCGATGAAAGAAGCACAGATTCGGAACGAAAAGCATGTTCTCGAGGGTCGCATTGCTTATATGCGTTTGGTGTTTGATCAGCAGCAGCAGGATCTTGCTGATGCTGCTTCCAAGGCTCTGGTGTACAGGCAAGATATAATTGAGGAGAACATACGGCTGGCTTATGCTTTGCAGGATGTGCAGCAGGAGAGGACGACGTTCGTTTCGGCATTGCTGCCGATTCTGGCAGACTACTCATTGCAGCCGCATGTTCATGATGCTCAGTCCATTGCCAGCAATGTTAAGATTTTGTTTAGGCATTTGCAGGAGAAGCTTATTATGACAGAGTCGAAATTGAAGCAGTTTCAGTATCAAGTAAGACCTTTACAGTCGAATTCGAATCAGTCTAGCACTAACAATACCCAACAGTCACCTCCATCTCATTCCATTGGTGCAGCATTGGAAATTTCCAACAAAGATAGGCTTGAAATGGTTACTCACCCGCCATCTTCCCATGAGAAAGTACCGGCTTCTCCTCCTCCTGGTGCTCAGATGCAGACAACCGCCCCGAATTGGGATCAATCGGGTGGCCCTCGGAGCGGTTCTGGTGGTGTTGACACAGGGAATATTGAACACAGTGAACCTCAAAACAGTAACTCTGTAACCCCAGCTGTACCTGCTAAGCCTACTATTGCTAGACTTGATGCAAATCGATATAGAGACGATACAACACCCGGAAAACAGGTCAAGTTTCGTGAGCCTGAGATGCAAACACACACAGATTATGATGATCATGACGAGGGATACAATGAGAGTGGAGGAACCTCCCTTACACCGATCCCAGCTCCTCTTATCCTCGATGAGGATGATCCATTACCAGCCATTGAGGGCCTCCAGATTTCGGGTGAAGCATTACCGGGACATGAGCTCCAAGCATCTGGATACTCCATTAATGGAACAACCAGTTGCAACTTTGAGTGGGTACGCCACCTTCCAGATGGATCAGTTAACTACATTGAAGGAGCAAAGCAACCCAACTATCTTCTCACTGCTGATGATGTCGATACATACCTTGCTATCGAAGTTCAACCTCTGGATAACAGGAAGCGAAAGGGAGAGCTCGTGAAGGTGTTTGCAAACGATCACAAGAAGATCACTTGTGAGCCCGAAATGCAAAGCCAGATACAGAAGATTCTTCAGAAGGGTCATGGATCATTTAAGGTGTTTGAGAACACTGGGTTTCTTGACATATGGGAACCTGCCACTTTGGCCATTAAGAGGGGAGCTTACAGCATTAAGCGCAGCTCTGAACCTAGTGTTGGTGGAGTTGTGGTGGCTGAGAAGTTTTCGCCCAACACAATCGTTTCGATTCCTTACGGAAGCCCTTCGGAATTCATCATCACCGATTCTGATATTGCTGGTGCTGGTGCTGGTGCTGATCATCTTTTGAAAACAGACGATGCTAGCTGTTCTAGAGATACACTTGTGCTCATATTGAGATTATTTATCGTAAGGGCTGTTGAGAGAAGAACAAGGAAAGGGAAAAAAAGGGTCTTATTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

682

Amino Acids

75.65

Weight (kDa)

5.45

Isoelectric Point (pI)

51.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IG_AIR9	PF23197	457 - 538	1.1e-07	AIR9 A9 domain
DUF7046	PF23080	572 - 675	1e-26	Domain of unknown function (DUF7046)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08440 AT5G08440 AT5G08440 AT5G23490 AT5G23490 AT5G23490 AT5G23490 AT5G23510 AT5G23510 AT5G23510
fragaria_vesca	FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_3g21410 FvH4_7g23540
malus_domestica	MD03G1185400.v1.1 MD04G1186900.v1.1 MD11G1230900.v1.1
prunus_persica	Prupe.4G196300_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1
pyrus_communis	pycom03g16520 pycom03g16530
rosa_chinensis	RchiOBHm_Chr1g0368691 RchiOBHm_Chr3g0485101 RchiOBHm_Chr5g0036791
rosa_laevigata	RLG00000023166 RLG00000027197 RLG00000033721
rosa_multiflora	Rmu_co8159396.1_g000001 Rmu_sc0000399.1_g000002 Rmu_sc0006040.1_g000006 Rmu_sc0006040.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044160 Rroxscaffold_4G00288350 Rroxscaffold_6G00397190
rosa_rugosa	Rorug01G0343700 Rorug03G0216200 Rorug03G0216300
rosa_samantha	Rh3AG266300 Rh3BG301700 Rh3CG300000 Rh3DG295800 Rh5AG250300 Rh5BG252000 Rh5CG284000 Rh5DG260300
rosa_wichuraiana	Rw5G023020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1168, 1750
AccB1I	GGYRCC	2 cut(s)	247, 328
AccBSI	CCGCTC	2 cut(s)	466, 1083
AccII	CGCG	1 cut(s)	385
AccIII	TCCGGA	1 cut(s)	289
AcoI	YGGCCR	1 cut(s)	1752
AcsI	RAATTY	5 cut(s)	35, 391, 877, 948, 1874
AcuI	CTGAAG	1 cut(s)	1664
AcyI	GRCGYC	2 cut(s)	248, 329
AfaI	GTAC	4 cut(s)	629, 1008, 1158, 1467
AgsI	TTSAA	7 cut(s)	128, 841, 971, 1115, 1502, 1571, 1933
AjnI	CCWGG	2 cut(s)	108, 1024
AjuI	GAANNNNNNNTTGG	2 cut(s)	1785, 1817
Alw21I	GWGCWC	6 cut(s)	189, 210, 1033, 1413, 1605, 1974
Alw26I	GTCTC	3 cut(s)	145, 267, 1197
Ama87I	CYCGRG	2 cut(s)	203, 545
Aor13HI	TCCGGA	1 cut(s)	289
AoxI	GGCC	5 cut(s)	120, 138, 1072, 1372, 1752
ApoI	RAATTY	5 cut(s)	35, 391, 877, 948, 1874
ArsI	GACNNNNNNTTYG	2 cut(s)	691, 723
AseI	ATTAAT	1 cut(s)	1434
Asp700I	GAANNNNTTC	1 cut(s)	1867
AspLEI	GCGC	3 cut(s)	250, 331, 1785
AspS9I	GGNCC	3 cut(s)	78, 1073, 1372
AsuC2I	CCSGG	4 cut(s)	397, 426, 1218, 1401
AsuHPI	GGTGA	5 cut(s)	400, 906, 974, 1400, 1876
AsuII	TTCGAA	1 cut(s)	881
AsuNHI	GCTAGC	1 cut(s)	1946
AvaI	CYCGRG	2 cut(s)	203, 545
AvaII	GGWCC	1 cut(s)	78
BaeI	ACNNNNGTAYC	2 cut(s)	1953, 1986
BalI	TGGCCA	1 cut(s)	1754
BanI	GGYRCC	2 cut(s)	247, 328
BanII	GRGCYC	5 cut(s)	189, 210, 1413, 1605, 1650
BarI	GAAGNNNNNNTAC	2 cut(s)	1458, 1490
BauI	CACGAG	1 cut(s)	1604
Bbv12I	GWGCWC	6 cut(s)	189, 210, 1033, 1413, 1605, 1974
BccI	CCATC	6 cut(s)	152, 238, 244, 928, 997, 1475
BceAI	ACGGC	2 cut(s)	107, 674
BciT130I	CCWGG	2 cut(s)	110, 1026
BciVI	GTATCC	3 cut(s)	344, 1280, 1418
BclI	TGATCA	4 cut(s)	444, 580, 1273, 1921
BcnI	CCSGG	4 cut(s)	397, 426, 1218, 1401
BcoDI	GTCTC	3 cut(s)	145, 267, 1197
BfaI	CTAG	6 cut(s)	72, 891, 1179, 1797, 1947, 1956
BfoI	RGCGCY	2 cut(s)	251, 332
BfuAI	ACCTGC	2 cut(s)	1168, 1750
BfuI	GTATCC	3 cut(s)	344, 1280, 1418
BglI	GCCNNNNNGGC	1 cut(s)	1751
BlpI	GCTNAGC	1 cut(s)	1164
Bme1390I	CCNGG	6 cut(s)	110, 397, 426, 1026, 1218, 1401
Bme18I	GGWCC	1 cut(s)	78
BmeT110I	CYCGRG	2 cut(s)	203, 545
BmgT120I	GGNCC	3 cut(s)	78, 1073, 1372
BmiI	GGNNCC	4 cut(s)	249, 330, 1306, 1740
BmrFI	CCNGG	6 cut(s)	110, 397, 426, 1026, 1218, 1401
BmrI	ACTGGG	1 cut(s)	1728
BmsI	GCATC	8 cut(s)	399, 595, 751, 1026, 1177, 1239, 1427, 1933
BmtI	GCTAGC	1 cut(s)	1950
BmuI	ACTGGG	1 cut(s)	1728
BpmI	CTGGAG	1 cut(s)	1361
Bpu1102I	GCTNAGC	1 cut(s)	1164
Bpu14I	TTCGAA	1 cut(s)	881
BpuEI	CTTGAG	1 cut(s)	196
BpuMI	CCSGG	4 cut(s)	397, 426, 1218, 1401
Bsa29I	ATCGAT	2 cut(s)	242, 1195
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaHI	GRCGYC	2 cut(s)	248, 329
BsaJI	CCNNGG	5 cut(s)	135, 383, 396, 615, 1076
BsaWI	WCCGGW	1 cut(s)	289
BsaXI	ACNNNNNCTCC	6 cut(s)	1395, 1425, 1590, 1620, 1800, 1830
Bse118I	RCCGGY	1 cut(s)	1009
Bse1I	ACTGG	2 cut(s)	1446, 1723
Bse3DI	GCAATG	5 cut(s)	555, 713, 740, 771, 787
Bse8I	GATNNNNATC	1 cut(s)	1191
BseAI	TCCGGA	1 cut(s)	289
BseBI	CCWGG	2 cut(s)	110, 1026
BseCI	ATCGAT	2 cut(s)	242, 1195
BseDI	CCNNGG	5 cut(s)	135, 383, 396, 615, 1076
BseGI	GGATG	4 cut(s)	168, 421, 685, 1354
BseJI	GATNNNNATC	1 cut(s)	1191
BseMI	GCAATG	5 cut(s)	555, 713, 740, 771, 787
BseMII	CTCAG	5 cut(s)	174, 779, 1046, 1236, 1812
BseNI	ACTGG	2 cut(s)	1446, 1723
BseRI	GAGGAG	5 cut(s)	176, 662, 1008, 1011, 1320
BseYI	CCCAGC	4 cut(s)	323, 493, 1150, 1324
BsgI	GTGCAG	2 cut(s)	704, 957
Bsh1236I	CGCG	1 cut(s)	385
BshFI	GGCC	5 cut(s)	122, 140, 1074, 1374, 1754
BshNI	GGYRCC	2 cut(s)	247, 328
BshVI	ATCGAT	2 cut(s)	242, 1195
BsiHKAI	GWGCWC	6 cut(s)	189, 210, 1033, 1413, 1605, 1974
BsiHKCI	CYCGRG	2 cut(s)	203, 545
BsiSI	CCGG	6 cut(s)	290, 396, 426, 1010, 1218, 1400
BslFI	GGGAC	1 cut(s)	1416
BsmAI	GTCTC	3 cut(s)	145, 267, 1197
BsmBI	CGTCTC	2 cut(s)	267, 1197
BsmFI	GGGAC	1 cut(s)	1416
BsnI	GGCC	5 cut(s)	122, 140, 1074, 1374, 1754
BsoBI	CYCGRG	2 cut(s)	203, 545
Bsp119I	TTCGAA	1 cut(s)	881
Bsp1286I	GDGCHC	7 cut(s)	189, 210, 1033, 1413, 1605, 1650, 1974
Bsp13I	TCCGGA	1 cut(s)	289
Bsp1407I	TGTACA	1 cut(s)	627
Bsp1720I	GCTNAGC	1 cut(s)	1164
BspANI	GGCC	5 cut(s)	122, 140, 1074, 1374, 1754
BspCNI	CTCAG	5 cut(s)	175, 778, 1045, 1237, 1813
BspDI	ATCGAT	2 cut(s)	242, 1195
BspEI	TCCGGA	1 cut(s)	289
BspFNI	CGCG	1 cut(s)	385
BspHI	TCATGA	4 cut(s)	114, 454, 757, 1276
BspLI	GGNNCC	4 cut(s)	249, 330, 1306, 1740
BspMI	ACCTGC	2 cut(s)	1168, 1750
BspOI	GCTAGC	1 cut(s)	1950
BspT104I	TTCGAA	1 cut(s)	881
BspT107I	GGYRCC	2 cut(s)	247, 328
BsrBI	CCGCTC	2 cut(s)	466, 1083
BsrDI	GCAATG	5 cut(s)	555, 713, 740, 771, 787
BsrFI	RCCGGY	1 cut(s)	1009
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	2 cut(s)	1446, 1723
BssAI	RCCGGY	1 cut(s)	1009
BssECI	CCNNGG	5 cut(s)	135, 383, 396, 615, 1076
BssNI	GRCGYC	2 cut(s)	248, 329
BssSI	CACGAG	1 cut(s)	1604
BssT1I	CCWWGG	1 cut(s)	615
Bst2BI	CACGAG	1 cut(s)	1604
Bst2UI	CCWGG	2 cut(s)	110, 1026
Bst4CI	ACNGT	4 cut(s)	873, 912, 1121, 1136
BstACI	GRCGYC	2 cut(s)	248, 329
BstAPI	GCANNNNNTGC	1 cut(s)	682
BstAUI	TGTACA	1 cut(s)	627
BstBI	TTCGAA	1 cut(s)	881
BstC8I	GCNNGC	3 cut(s)	663, 778, 1948
BstDEI	CTNAG	6 cut(s)	183, 765, 1032, 1164, 1245, 1821
BstDSI	CCRYGG	1 cut(s)	383
BstENI	CCTNNNNNAGG	1 cut(s)	1343
BstF5I	GGATG	4 cut(s)	168, 421, 685, 1354
BstFNI	CGCG	1 cut(s)	385
BstH2I	RGCGCY	2 cut(s)	251, 332
BstHHI	GCGC	3 cut(s)	250, 331, 1785
BstMAI	GTCTC	3 cut(s)	145, 267, 1197
BstNI	CCWGG	2 cut(s)	110, 1026
BstNSI	RCATGY	2 cut(s)	542, 755
BstSCI	CCNGG	6 cut(s)	108, 395, 424, 1024, 1216, 1399
BstUI	CGCG	1 cut(s)	385
BstX2I	RGATCY	1 cut(s)	595
BstXI	CCANNNNNNTGG	2 cut(s)	622, 1421
BstYI	RGATCY	1 cut(s)	595
Bsu15I	ATCGAT	2 cut(s)	242, 1195
BsuI	GTATCC	3 cut(s)	344, 1280, 1418
BsuRI	GGCC	5 cut(s)	122, 140, 1074, 1374, 1754
BsuTUI	ATCGAT	2 cut(s)	242, 1195
BtgI	CCRYGG	1 cut(s)	383
BtsCI	GGATG	4 cut(s)	168, 421, 685, 1354
BtsI	GCAGTG	1 cut(s)	1530
BtsIMutI	CAGTG	3 cut(s)	1126, 1530, 1716
BveI	ACCTGC	2 cut(s)	1168, 1750
Cac8I	GCNNGC	3 cut(s)	663, 778, 1948
CciI	TCATGA	4 cut(s)	114, 454, 757, 1276
CfoI	GCGC	3 cut(s)	250, 331, 1785
Cfr10I	RCCGGY	1 cut(s)	1009
Cfr13I	GGNCC	3 cut(s)	78, 1073, 1372
Cfr42I	CCGCGG	1 cut(s)	386
ClaI	ATCGAT	2 cut(s)	242, 1195
Csp6I	GTAC	4 cut(s)	628, 1007, 1157, 1466
CspCI	CAANNNNNGTGG	2 cut(s)	1279, 1314
CviQI	GTAC	4 cut(s)	628, 1007, 1157, 1466
DdeI	CTNAG	6 cut(s)	183, 765, 1032, 1164, 1245, 1821
DinI	GGCGCC	2 cut(s)	249, 330
EaeI	YGGCCR	1 cut(s)	1752
EciI	GGCGGA	1 cut(s)	369
Ecl136II	GAGCTC	4 cut(s)	187, 208, 1411, 1603
Eco130I	CCWWGG	1 cut(s)	615
Eco24I	GRGCYC	5 cut(s)	189, 210, 1413, 1605, 1650
Eco47I	GGWCC	1 cut(s)	78
Eco53kI	GAGCTC	4 cut(s)	187, 208, 1411, 1603
Eco57I	CTGAAG	1 cut(s)	1664
Eco88I	CYCGRG	2 cut(s)	203, 545
EcoICRI	GAGCTC	4 cut(s)	187, 208, 1411, 1603
EcoNI	CCTNNNNNAGG	1 cut(s)	1343
EcoO109I	RGGNCCY	1 cut(s)	1372
EcoRI	GAATTC	3 cut(s)	391, 877, 1874
EcoRII	CCWGG	2 cut(s)	108, 1024
EcoT14I	CCWWGG	1 cut(s)	615
EcoT38I	GRGCYC	5 cut(s)	189, 210, 1413, 1605, 1650
EgeI	GGCGCC	2 cut(s)	249, 330
EheI	GGCGCC	2 cut(s)	249, 330
ErhI	CCWWGG	1 cut(s)	615
Esp3I	CGTCTC	2 cut(s)	267, 1197
FalI	AAGNNNNNCTT	2 cut(s)	951, 983
FaqI	GGGAC	1 cut(s)	1416
FauI	CCCGC	3 cut(s)	378, 459, 993
FauNDI	CATATG	1 cut(s)	1733
FbaI	TGATCA	4 cut(s)	444, 580, 1273, 1921
FokI	GGATG	4 cut(s)	155, 408, 692, 1361
FriOI	GRGCYC	5 cut(s)	189, 210, 1413, 1605, 1650
FspBI	CTAG	6 cut(s)	72, 891, 1179, 1797, 1947, 1956
GlaI	GCGC	3 cut(s)	249, 330, 1784
GsaI	CCCAGC	4 cut(s)	327, 497, 1154, 1328
GsuI	CTGGAG	1 cut(s)	1361
HaeII	RGCGCY	2 cut(s)	251, 332
HaeIII	GGCC	5 cut(s)	122, 140, 1074, 1374, 1754
HapII	CCGG	6 cut(s)	290, 396, 426, 1010, 1218, 1400
HhaI	GCGC	3 cut(s)	250, 331, 1785
Hin1I	GRCGYC	2 cut(s)	248, 329
Hin6I	GCGC	3 cut(s)	248, 329, 1783
HinP1I	GCGC	3 cut(s)	248, 329, 1783
HincII	GTYRAC	3 cut(s)	48, 1099, 1492
HindII	GTYRAC	3 cut(s)	48, 1099, 1492
HindIII	AAGCTT	1 cut(s)	815
HpaI	GTTAAC	1 cut(s)	1492
HpaII	CCGG	6 cut(s)	290, 396, 426, 1010, 1218, 1400
HphI	GGTGA	5 cut(s)	400, 906, 974, 1400, 1876
Hpy166II	GTNNAC	7 cut(s)	48, 221, 298, 628, 1099, 1124, 1492
Hpy8I	GTNNAC	7 cut(s)	48, 221, 298, 628, 1099, 1124, 1492
Hpy99I	CGWCG	3 cut(s)	95, 262, 703
HpyAV	CCTTC	8 cut(s)	112, 356, 395, 1484, 1496, 1603, 1678, 1878
HpyCH4III	ACNGT	4 cut(s)	873, 912, 1121, 1136
HpyCH4IV	ACGT	2 cut(s)	217, 701
HpyF3I	CTNAG	6 cut(s)	183, 765, 1032, 1164, 1245, 1821
HpySE526I	ACGT	2 cut(s)	217, 701
Hsp92I	GRCGYC	2 cut(s)	248, 329
HspAI	GCGC	3 cut(s)	248, 329, 1783
KasI	GGCGCC	2 cut(s)	247, 328
Kpn2I	TCCGGA	1 cut(s)	289
Ksp22I	TGATCA	4 cut(s)	444, 580, 1273, 1921
KspAI	GTTAAC	1 cut(s)	1492
KspI	CCGCGG	1 cut(s)	386
LmnI	GCTCC	6 cut(s)	213, 1080, 1333, 1416, 1505, 1766
LweI	GCATC	8 cut(s)	399, 595, 751, 1026, 1177, 1239, 1427, 1933
MaeI	CTAG	6 cut(s)	72, 891, 1179, 1797, 1947, 1956
MaeII	ACGT	2 cut(s)	217, 701
MaeIII	GTNAC	4 cut(s)	912, 976, 1136, 1144
MbiI	CCGCTC	2 cut(s)	466, 1083
MboII	GAAGA	6 cut(s)	984, 1517, 1645, 1670, 1684, 2022
MfeI	CAATTG	1 cut(s)	479
MflI	RGATCY	1 cut(s)	595
MhlI	GDGCHC	7 cut(s)	189, 210, 1033, 1413, 1605, 1650, 1974
MlsI	TGGCCA	1 cut(s)	1754
MluNI	TGGCCA	1 cut(s)	1754
Mly113I	GGCGCC	2 cut(s)	248, 329
MlyI	GAGTC	3 cut(s)	6, 193, 839
MmeI	TCCRAC	1 cut(s)	978
Mox20I	TGGCCA	1 cut(s)	1754
MroI	TCCGGA	1 cut(s)	289
MroXI	GAANNNNTTC	1 cut(s)	1867
MscI	TGGCCA	1 cut(s)	1754
MseI	TTAA	6 cut(s)	786, 1434, 1491, 1701, 1758, 1779
MslI	CAYNNNNRTG	2 cut(s)	459, 756
Msp20I	TGGCCA	1 cut(s)	1754
MspA1I	CMGCKG	4 cut(s)	253, 385, 493, 1154
MspI	CCGG	6 cut(s)	290, 396, 426, 1010, 1218, 1400
MspR9I	CCNGG	6 cut(s)	110, 397, 426, 1026, 1218, 1401
MunI	CAATTG	1 cut(s)	479
MvaI	CCWGG	2 cut(s)	110, 1026
MvnI	CGCG	1 cut(s)	385
NarI	GGCGCC	2 cut(s)	248, 329
NciI	CCSGG	4 cut(s)	397, 426, 1218, 1401
NdeI	CATATG	1 cut(s)	1733
NheI	GCTAGC	1 cut(s)	1946
NlaIV	GGNNCC	4 cut(s)	249, 330, 1306, 1740
NmeAIII	GCCGAG	1 cut(s)	160
NmuCI	GTSAC	1 cut(s)	912
NspI	RCATGY	2 cut(s)	542, 755
NspV	TTCGAA	1 cut(s)	881
PaeR7I	CTCGAG	2 cut(s)	203, 545
PagI	TCATGA	4 cut(s)	114, 454, 757, 1276
PdmI	GAANNNNTTC	1 cut(s)	1867
PfeI	GAWTC	7 cut(s)	451, 523, 724, 883, 1675, 1852, 1889
PflFI	GACNNNGTC	1 cut(s)	829
PleI	GAGTC	3 cut(s)	6, 193, 838
PluTI	GGCGCC	2 cut(s)	251, 332
PpsI	GAGTC	3 cut(s)	6, 193, 838
PshBI	ATTAAT	1 cut(s)	1434
Psp124BI	GAGCTC	4 cut(s)	189, 210, 1413, 1605
Psp6I	CCWGG	2 cut(s)	108, 1024
PspFI	CCCAGC	4 cut(s)	323, 493, 1150, 1324
PspGI	CCWGG	2 cut(s)	108, 1024
PspN4I	GGNNCC	4 cut(s)	249, 330, 1306, 1740
PspPI	GGNCC	3 cut(s)	78, 1073, 1372
PsrI	GAACNNNNNNTAC	2 cut(s)	1297, 1329
PsuI	RGATCY	1 cut(s)	595
PsyI	GACNNNGTC	1 cut(s)	829
PvuII	CAGCTG	2 cut(s)	493, 1154
RsaI	GTAC	4 cut(s)	629, 1008, 1158, 1467
RsaNI	GTAC	4 cut(s)	628, 1007, 1157, 1466
RseI	CAYNNNNRTG	2 cut(s)	459, 756
SacI	GAGCTC	4 cut(s)	189, 210, 1413, 1605
SacII	CCGCGG	1 cut(s)	386
SaqAI	TTAA	6 cut(s)	786, 1434, 1491, 1701, 1758, 1779
Sau96I	GGNCC	3 cut(s)	78, 1073, 1372
SchI	GAGTC	3 cut(s)	6, 193, 839
ScrFI	CCNGG	6 cut(s)	110, 397, 426, 1026, 1218, 1401
SduI	GDGCHC	7 cut(s)	189, 210, 1033, 1413, 1605, 1650, 1974
SfaNI	GCATC	8 cut(s)	399, 595, 751, 1026, 1177, 1239, 1427, 1933
SfoI	GGCGCC	2 cut(s)	249, 330
Sfr274I	CTCGAG	2 cut(s)	203, 545
Sfr303I	CCGCGG	1 cut(s)	386
SfuI	TTCGAA	1 cut(s)	881
SgrBI	CCGCGG	1 cut(s)	386
SinI	GGWCC	1 cut(s)	78
SlaI	CTCGAG	2 cut(s)	203, 545
SmiMI	CAYNNNNRTG	2 cut(s)	459, 756
SmlI	CTYRAG	3 cut(s)	175, 203, 545
SmoI	CTYRAG	3 cut(s)	175, 203, 545
SspDI	GGCGCC	2 cut(s)	247, 328
SspI	AATATT	2 cut(s)	371, 1111
SspMI	CTAG	6 cut(s)	72, 891, 1179, 1797, 1947, 1956
SstI	GAGCTC	4 cut(s)	189, 210, 1413, 1605
StyD4I	CCNGG	6 cut(s)	108, 395, 424, 1024, 1216, 1399
StyI	CCWWGG	1 cut(s)	615
TaaI	ACNGT	4 cut(s)	873, 912, 1121, 1136
TaiI	ACGT	2 cut(s)	220, 704
TaqII	GACCGA	1 cut(s)	66
TatI	WGTACW	1 cut(s)	627
TauI	GCSGC	3 cut(s)	253, 385, 751
TfiI	GAWTC	7 cut(s)	451, 523, 724, 883, 1675, 1852, 1889
Tru1I	TTAA	6 cut(s)	786, 1434, 1491, 1701, 1758, 1779
Tru9I	TTAA	6 cut(s)	786, 1434, 1491, 1701, 1758, 1779
TscAI	CASTG	3 cut(s)	1126, 1537, 1723
TseFI	GTSAC	1 cut(s)	912
Tsp45I	GTSAC	1 cut(s)	912
TspDTI	ATGAA	6 cut(s)	131, 443, 471, 524, 746, 1867
TspGWI	ACGGA	3 cut(s)	24, 374, 1875
TspRI	CASTG	3 cut(s)	1126, 1537, 1723
Tth111I	GACNNNGTC	1 cut(s)	829
VpaK11BI	GGWCC	1 cut(s)	78
VspI	ATTAAT	1 cut(s)	1434
XagI	CCTNNNNNAGG	1 cut(s)	1343
XapI	RAATTY	5 cut(s)	35, 391, 877, 948, 1874
XbaI	TCTAGA	1 cut(s)	1955
XceI	RCATGY	2 cut(s)	542, 755
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1478
XhoI	CTCGAG	2 cut(s)	203, 545
XmnI	GAANNNNTTC	1 cut(s)	1867
XspI	CTAG	6 cut(s)	72, 891, 1179, 1797, 1947, 1956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.