Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001142

Physical Location & Seq

Genomic Coordinates Reverse (-)

31360011 .. 31362080

Gene Structure 2070 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033721

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGAGAACGGACTCGATTGGAGAATTGCGGAGAAATTTTCAGGGTTGACGAGGACTCCCAGCCCTGATCCTAGTCGGTCCTCCGAAACCGACGACATTGGCTTGTCCCAGGTCATGAAGGCCGTCGAAGCTGCCGAGGCCACCATCAAGCAACAGGTCGAGGAGAACATCCGCTTGAGGTGTGAGCTCGAATACAAGACTCTCGAGCTCCACAGACGTAAACAACTCCACGAACCATCGTCGATGGCGCCGCGGTCGTCTCTCGATCTGGGAGGATCGGCTCGTCCGGAAGTGAACAATTCAGGAGATAATAGGGTGCCCAATTCCGATAATGGGGGATACAGCACGGAAGGGGAATATTATGATCCGCCCCGGGTGAATTCCGGGGAAGGGTTGATGCAATTGGACCATCCCGGCGAGAAGAATCTTGTGATCAAGATTCATGAAAATGAGCAGGAGATCATGCAATTGCGGAAGCAGCTGGCGGATTACTCGATGAAAGAAGCACAGATTCGGAACGAAAAGTATGTTCTCGAGGGTCGCATTGCTTACATGCGTTTGGTATTTGACCAGCAGCAGCAGGATCTTGCTGATGCTGCTTCCAAGGCTCTGGTGTACAGGCAAGATATAATTGAGGAGAACATACGGCTGGCTTATGCTTTGCAGGATGTGCAGCAGGAGAGGATGACGTTCCTTTCGGCATTGCTGCCGATTCTGGCAGACTACTCGTTGCAGCCGCAGGTTCATGATGCTCAGTCCATTGCCAGCAATGTTAAGATTTTGTTTAGGCATTTGCAGGAGAAGCTTATTATGACAGACTCGAAATTGAAGCAATTTCAGTATCAAGTAAGACCTTTACAGTCGAATTCGAATCAGTCTAGCACTAACAATACCCAACAGTCACCTCCATCTCATTCCATTGGTGCAGCATTGGAAATTTCTAACAAAGATGGGCTTGAAATGGTTACTCACCCGCCATCTTCCCATGAGAAAGTACCGGCTTCTCCTGCTCCTGGTGCTCAGATGCAGACAACCGCCCCGAATTGGGATCAACCGGGTGGCCCTCGGAGCGGTTCAGGTGGTGTTGACACAGGGAATATTGAACACAGTGAACCTCAAAACAGGGACTCTGTAACCCCAGCTGTACCTGCTAAGCCTACTATTGCTAGACTTGATGCAAATCGATATAGAGACGATACAACACCCGGAAAACAGGTCAAGTTTCGTGAGCCCGAGATGCAAACACACACAGATTATGATGATCATGACGAGGGATACAATGAGAGTGGAGGAACCTCTCCTTACACTGATCCCAGCTCCTCCTCTTATCCTCGGTATCTATCACCGGTTCATGAAGATCTGTTTTTAGATGAGGATGATCCATTACCAGCCATTGAGGGCCTCCAGATTTCGGGTGAAGCATTACCGGGACATGAGCTCCAAGCATCTGGATACTCCATTAATGGAACAACCAGTTGCAACTTTGAGTGGGTACGCCACCTTCCAGATGGATCAGTTAACTACATTGAAGGAGCAAAGCAACCGAACTATCTTCTCACTGCTGATGATGTCGATACATACCTTGCTATCGAAGTTCAACCCCTGGACAACAGGAAGCGAAAGGGAGAGCTCGTGAAGGTGTTTGCAAACGATCACAAGAAGATCACCTGTGAGCCCGAAATGCAAAGCCAGATACAGAAGATTCTTCAAAAGGGTCACGGATCATTTAAGGTGTTTGAGAACACTGGGTTTCTTGACATATGGGAACCTGCCACTTTGGCCATTAAGAGGGGAGCTTACAGCATTAAGCGCAGCTCTGAACCTAGTGTTGGTGGAGTTGTGGTGGCTGAGAAGTTTTCGCCCAATACAACCGTTTCGATTCCTTATGGAAGCCCTTCGGAATTCATCATCACCGATTCTGATATTGCTGGTGCTGATGCTGATCATCTTTTGAAAACAGACGATGCTAGCTGTTCTAGAGATACGCTTGTGCTCATATTGAGATTATTTATCGTAAAGGCTGTTGAGAGAAGGACAAGGAAAGGGAAAAAAAGGGTCTTATTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

690

Amino Acids

76.77

Weight (kDa)

5.26

Isoelectric Point (pI)

53.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IG_AIR9	PF23197	466 - 547	1.1e-07	AIR9 A9 domain
DUF7046	PF23080	580 - 682	3.4e-27	Domain of unknown function (DUF7046)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08440 AT5G08440 AT5G08440 AT5G23490 AT5G23490 AT5G23490 AT5G23490 AT5G23510 AT5G23510 AT5G23510
fragaria_vesca	FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_3g21410 FvH4_7g23540
malus_domestica	MD03G1185400.v1.1 MD04G1186900.v1.1 MD11G1230900.v1.1
prunus_persica	Prupe.4G196300_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1
pyrus_communis	pycom03g16520 pycom03g16530
rosa_chinensis	RchiOBHm_Chr1g0368691 RchiOBHm_Chr3g0485101 RchiOBHm_Chr5g0036791
rosa_laevigata	RLG00000023166 RLG00000027197 RLG00000033721
rosa_multiflora	Rmu_co8159396.1_g000001 Rmu_sc0000399.1_g000002 Rmu_sc0006040.1_g000006 Rmu_sc0006040.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044160 Rroxscaffold_4G00288350 Rroxscaffold_6G00397190
rosa_rugosa	Rorug01G0343700 Rorug03G0216200 Rorug03G0216300
rosa_samantha	Rh3AG266300 Rh3BG301700 Rh3CG300000 Rh3DG295800 Rh5AG250300 Rh5BG252000 Rh5CG284000 Rh5DG260300
rosa_wichuraiana	Rw5G023020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	730, 1156, 1777
AccB1I	GGYRCC	2 cut(s)	247, 316
AccBSI	CCGCTC	1 cut(s)	1071
AccII	CGCG	1 cut(s)	253
AccIII	TCCGGA	1 cut(s)	286
AclWI	GGATC	9 cut(s)	62, 283, 359, 591, 1056, 1304, 1373, 1519, 1729
AcoI	YGGCCR	1 cut(s)	1779
AcsI	RAATTY	5 cut(s)	35, 379, 865, 936, 1901
AcyI	GRCGYC	1 cut(s)	248
AfaI	GTAC	4 cut(s)	617, 996, 1146, 1494
AfiI	CCNNNNNNNGG	9 cut(s)	333, 390, 1013, 1044, 1045, 1070, 1411, 1788, 1829
AgeI	ACCGGT	1 cut(s)	1345
AgsI	TTSAA	7 cut(s)	829, 959, 1103, 1529, 1598, 1709, 1954
AjnI	CCWGG	3 cut(s)	108, 1012, 1602
AjuI	GAANNNNNNNTTGG	2 cut(s)	1812, 1844
Alw21I	GWGCWC	6 cut(s)	189, 210, 1021, 1440, 1632, 1995
Alw26I	GTCTC	2 cut(s)	264, 1185
AlwI	GGATC	9 cut(s)	62, 283, 359, 591, 1056, 1304, 1373, 1519, 1729
Ama87I	CYCGRG	4 cut(s)	203, 372, 533, 1232
Aor13HI	TCCGGA	1 cut(s)	286
AoxI	GGCC	5 cut(s)	120, 138, 1060, 1399, 1779
ApoI	RAATTY	5 cut(s)	35, 379, 865, 936, 1901
ArsI	GACNNNNNNTTYG	2 cut(s)	679, 711
AseI	ATTAAT	1 cut(s)	1461
AsiGI	ACCGGT	1 cut(s)	1345
Asp700I	GAANNNNTTC	1 cut(s)	1894
AspLEI	GCGC	2 cut(s)	250, 1812
AspS9I	GGNCC	4 cut(s)	78, 406, 1061, 1399
AsuC2I	CCSGG	7 cut(s)	373, 374, 385, 414, 1056, 1206, 1428
AsuHPI	GGTGA	7 cut(s)	388, 894, 962, 1335, 1427, 1657, 1903
AsuII	TTCGAA	1 cut(s)	869
AsuNHI	GCTAGC	1 cut(s)	1967
AvaI	CYCGRG	4 cut(s)	203, 372, 533, 1232
AvaII	GGWCC	2 cut(s)	78, 406
BaeGI	GKGCMC	1 cut(s)	321
BaeI	ACNNNNGTAYC	2 cut(s)	1974, 2007
BalI	TGGCCA	1 cut(s)	1781
BanI	GGYRCC	2 cut(s)	247, 316
BanII	GRGCYC	6 cut(s)	189, 210, 1233, 1440, 1632, 1677
BarI	GAAGNNNNNNTAC	2 cut(s)	1485, 1517
BauI	CACGAG	1 cut(s)	1631
Bbv12I	GWGCWC	6 cut(s)	189, 210, 1021, 1440, 1632, 1995
BccI	CCATC	8 cut(s)	152, 238, 244, 417, 916, 944, 985, 1502
BceAI	ACGGC	2 cut(s)	107, 662
BcgI	CGANNNNNNTGC	2 cut(s)	708, 742
BciT130I	CCWGG	3 cut(s)	110, 1014, 1604
BciVI	GTATCC	3 cut(s)	332, 1268, 1445
BclI	TGATCA	3 cut(s)	432, 1261, 1942
BcnI	CCSGG	7 cut(s)	373, 374, 385, 414, 1056, 1206, 1428
BcoDI	GTCTC	2 cut(s)	264, 1185
BfaI	CTAG	6 cut(s)	72, 879, 1167, 1824, 1968, 1977
BfoI	RGCGCY	1 cut(s)	251
BfuAI	ACCTGC	3 cut(s)	730, 1156, 1777
BfuI	GTATCC	3 cut(s)	332, 1268, 1445
BglI	GCCNNNNNGGC	1 cut(s)	1778
BglII	AGATCT	1 cut(s)	1357
BlpI	GCTNAGC	1 cut(s)	1152
Bme18I	GGWCC	2 cut(s)	78, 406
BmeT110I	CYCGRG	4 cut(s)	203, 372, 533, 1232
BmgT120I	GGNCC	4 cut(s)	78, 406, 1061, 1399
BmiI	GGNNCC	4 cut(s)	249, 318, 1294, 1767
BmrI	ACTGGG	1 cut(s)	1755
BmsI	GCATC	9 cut(s)	387, 583, 739, 1014, 1165, 1227, 1454, 1927, 1954
BmtI	GCTAGC	1 cut(s)	1971
BmuI	ACTGGG	1 cut(s)	1755
BpmI	CTGGAG	1 cut(s)	1388
Bpu1102I	GCTNAGC	1 cut(s)	1152
Bpu14I	TTCGAA	1 cut(s)	869
BpuEI	CTTGAG	1 cut(s)	196
BpuMI	CCSGG	7 cut(s)	373, 374, 385, 414, 1056, 1206, 1428
Bsa29I	ATCGAT	1 cut(s)	1183
BsaBI	GATNNNNATC	2 cut(s)	1179, 1941
BsaHI	GRCGYC	1 cut(s)	248
BsaWI	WCCGGW	2 cut(s)	286, 1345
BsaXI	ACNNNNNCTCC	8 cut(s)	40, 70, 1422, 1452, 1617, 1647, 1827, 1857
Bsc4I	CCNNNNNNNGG	9 cut(s)	333, 390, 1013, 1044, 1045, 1070, 1411, 1788, 1829
Bse118I	RCCGGY	2 cut(s)	997, 1345
Bse1I	ACTGG	2 cut(s)	1473, 1750
Bse3DI	GCAATG	4 cut(s)	543, 701, 759, 775
Bse8I	GATNNNNATC	2 cut(s)	1179, 1941
BseAI	TCCGGA	1 cut(s)	286
BseBI	CCWGG	3 cut(s)	110, 1014, 1604
BseCI	ATCGAT	1 cut(s)	1183
BseGI	GGATG	5 cut(s)	168, 409, 673, 690, 1381
BseJI	GATNNNNATC	2 cut(s)	1179, 1941
BseLI	CCNNNNNNNGG	9 cut(s)	333, 390, 1013, 1044, 1045, 1070, 1411, 1788, 1829
BseMI	GCAATG	4 cut(s)	543, 701, 759, 775
BseMII	CTCAG	3 cut(s)	767, 1034, 1839
BseNI	ACTGG	2 cut(s)	1473, 1750
BseRI	GAGGAG	4 cut(s)	176, 650, 1309, 1312
BseSI	GKGCMC	1 cut(s)	321
BseYI	CCCAGC	3 cut(s)	59, 1138, 1313
BsgI	GTGCAG	2 cut(s)	692, 945
Bsh1236I	CGCG	1 cut(s)	253
Bsh1285I	CGRYCG	1 cut(s)	257
BshFI	GGCC	5 cut(s)	122, 140, 1062, 1401, 1781
BshNI	GGYRCC	2 cut(s)	247, 316
BshTI	ACCGGT	1 cut(s)	1345
BshVI	ATCGAT	1 cut(s)	1183
BsiEI	CGRYCG	1 cut(s)	257
BsiHKAI	GWGCWC	6 cut(s)	189, 210, 1021, 1440, 1632, 1995
BsiHKCI	CYCGRG	4 cut(s)	203, 372, 533, 1232
BsiSI	CCGG	9 cut(s)	287, 373, 384, 414, 998, 1055, 1206, 1346, 1427
BslFI	GGGAC	3 cut(s)	91, 1139, 1443
BslI	CCNNNNNNNGG	9 cut(s)	333, 390, 1013, 1044, 1045, 1070, 1411, 1788, 1829
BsmAI	GTCTC	2 cut(s)	264, 1185
BsmBI	CGTCTC	2 cut(s)	264, 1185
BsmFI	GGGAC	3 cut(s)	91, 1139, 1443
BsnI	GGCC	5 cut(s)	122, 140, 1062, 1401, 1781
BsoBI	CYCGRG	4 cut(s)	203, 372, 533, 1232
Bsp119I	TTCGAA	1 cut(s)	869
Bsp1286I	GDGCHC	9 cut(s)	189, 210, 321, 1021, 1233, 1440, 1632, 1677, 1995
Bsp13I	TCCGGA	1 cut(s)	286
Bsp1407I	TGTACA	1 cut(s)	615
Bsp1720I	GCTNAGC	1 cut(s)	1152
BspANI	GGCC	5 cut(s)	122, 140, 1062, 1401, 1781
BspCNI	CTCAG	3 cut(s)	766, 1033, 1840
BspDI	ATCGAT	1 cut(s)	1183
BspEI	TCCGGA	1 cut(s)	286
BspFNI	CGCG	1 cut(s)	253
BspHI	TCATGA	5 cut(s)	114, 442, 745, 1264, 1351
BspLI	GGNNCC	4 cut(s)	249, 318, 1294, 1767
BspMI	ACCTGC	3 cut(s)	730, 1156, 1777
BspOI	GCTAGC	1 cut(s)	1971
BspPI	GGATC	9 cut(s)	62, 283, 359, 591, 1056, 1304, 1373, 1519, 1729
BspT104I	TTCGAA	1 cut(s)	869
BspT107I	GGYRCC	2 cut(s)	247, 316
BsrBI	CCGCTC	1 cut(s)	1071
BsrDI	GCAATG	4 cut(s)	543, 701, 759, 775
BsrFI	RCCGGY	2 cut(s)	997, 1345
BsrGI	TGTACA	1 cut(s)	615
BsrI	ACTGG	2 cut(s)	1473, 1750
BssAI	RCCGGY	2 cut(s)	997, 1345
BssNI	GRCGYC	1 cut(s)	248
BssSI	CACGAG	1 cut(s)	1631
BssT1I	CCWWGG	1 cut(s)	603
Bst2BI	CACGAG	1 cut(s)	1631
Bst2UI	CCWGG	3 cut(s)	110, 1014, 1604
Bst4CI	ACNGT	4 cut(s)	861, 900, 1109, 1873
BstACI	GRCGYC	1 cut(s)	248
BstAPI	GCANNNNNTGC	1 cut(s)	670
BstAUI	TGTACA	1 cut(s)	615
BstBI	TTCGAA	1 cut(s)	869
BstC8I	GCNNGC	4 cut(s)	483, 651, 766, 1969
BstDEI	CTNAG	4 cut(s)	753, 1020, 1152, 1848
BstDSI	CCRYGG	1 cut(s)	251
BstF5I	GGATG	5 cut(s)	168, 409, 673, 690, 1381
BstFNI	CGCG	1 cut(s)	253
BstH2I	RGCGCY	1 cut(s)	251
BstHHI	GCGC	2 cut(s)	250, 1812
BstMAI	GTCTC	2 cut(s)	264, 1185
BstMCI	CGRYCG	1 cut(s)	257
BstNI	CCWGG	3 cut(s)	110, 1014, 1604
BstNSI	RCATGY	1 cut(s)	556
BstSLI	GKGCMC	1 cut(s)	321
BstUI	CGCG	1 cut(s)	253
BstX2I	RGATCY	2 cut(s)	583, 1357
BstXI	CCANNNNNNTGG	2 cut(s)	610, 1448
BstYI	RGATCY	2 cut(s)	583, 1357
Bsu15I	ATCGAT	1 cut(s)	1183
BsuI	GTATCC	3 cut(s)	332, 1268, 1445
BsuRI	GGCC	5 cut(s)	122, 140, 1062, 1401, 1781
BsuTUI	ATCGAT	1 cut(s)	1183
BtgI	CCRYGG	1 cut(s)	251
BtsCI	GGATG	5 cut(s)	168, 409, 673, 690, 1381
BtsI	GCAGTG	1 cut(s)	1557
BtsIMutI	CAGTG	4 cut(s)	1114, 1305, 1557, 1743
BveI	ACCTGC	3 cut(s)	730, 1156, 1777
Cac8I	GCNNGC	4 cut(s)	483, 651, 766, 1969
CciI	TCATGA	5 cut(s)	114, 442, 745, 1264, 1351
CfoI	GCGC	2 cut(s)	250, 1812
Cfr10I	RCCGGY	2 cut(s)	997, 1345
Cfr13I	GGNCC	4 cut(s)	78, 406, 1061, 1399
Cfr42I	CCGCGG	1 cut(s)	254
Cfr9I	CCCGGG	1 cut(s)	372
ClaI	ATCGAT	1 cut(s)	1183
Csp6I	GTAC	4 cut(s)	616, 995, 1145, 1493
CspAI	ACCGGT	1 cut(s)	1345
CspCI	CAANNNNNGTGG	2 cut(s)	1267, 1302
CviAII	CATG	9 cut(s)	115, 443, 463, 553, 746, 986, 1265, 1352, 1433
CviQI	GTAC	4 cut(s)	616, 995, 1145, 1493
DdeI	CTNAG	4 cut(s)	753, 1020, 1152, 1848
DinI	GGCGCC	1 cut(s)	249
EaeI	YGGCCR	1 cut(s)	1779
EciI	GGCGGA	2 cut(s)	357, 500
Ecl136II	GAGCTC	4 cut(s)	187, 208, 1438, 1630
Eco130I	CCWWGG	1 cut(s)	603
Eco24I	GRGCYC	6 cut(s)	189, 210, 1233, 1440, 1632, 1677
Eco47I	GGWCC	2 cut(s)	78, 406
Eco53kI	GAGCTC	4 cut(s)	187, 208, 1438, 1630
Eco88I	CYCGRG	4 cut(s)	203, 372, 533, 1232
EcoICRI	GAGCTC	4 cut(s)	187, 208, 1438, 1630
EcoO109I	RGGNCCY	1 cut(s)	1399
EcoRI	GAATTC	3 cut(s)	379, 865, 1901
EcoRII	CCWGG	3 cut(s)	108, 1012, 1602
EcoT14I	CCWWGG	1 cut(s)	603
EcoT38I	GRGCYC	6 cut(s)	189, 210, 1233, 1440, 1632, 1677
EgeI	GGCGCC	1 cut(s)	249
EheI	GGCGCC	1 cut(s)	249
ErhI	CCWWGG	1 cut(s)	603
Esp3I	CGTCTC	2 cut(s)	264, 1185
FaeI	CATG	9 cut(s)	118, 446, 466, 556, 749, 989, 1268, 1355, 1436
FalI	AAGNNNNNCTT	2 cut(s)	939, 971
FaqI	GGGAC	3 cut(s)	91, 1139, 1443
FatI	CATG	9 cut(s)	114, 442, 462, 552, 745, 985, 1264, 1351, 1432
FauI	CCCGC	1 cut(s)	981
FauNDI	CATATG	1 cut(s)	1760
FbaI	TGATCA	3 cut(s)	432, 1261, 1942
FokI	GGATG	5 cut(s)	155, 396, 680, 697, 1388
FriOI	GRGCYC	6 cut(s)	189, 210, 1233, 1440, 1632, 1677
FspBI	CTAG	6 cut(s)	72, 879, 1167, 1824, 1968, 1977
GlaI	GCGC	2 cut(s)	249, 1811
GsaI	CCCAGC	3 cut(s)	63, 1142, 1317
GsuI	CTGGAG	1 cut(s)	1388
HaeII	RGCGCY	1 cut(s)	251
HaeIII	GGCC	5 cut(s)	122, 140, 1062, 1401, 1781
HapII	CCGG	9 cut(s)	287, 373, 384, 414, 998, 1055, 1206, 1346, 1427
HhaI	GCGC	2 cut(s)	250, 1812
Hin1I	GRCGYC	1 cut(s)	248
Hin1II	CATG	9 cut(s)	118, 446, 466, 556, 749, 989, 1268, 1355, 1436
Hin6I	GCGC	2 cut(s)	248, 1810
HinP1I	GCGC	2 cut(s)	248, 1810
HincII	GTYRAC	3 cut(s)	48, 1087, 1519
HindII	GTYRAC	3 cut(s)	48, 1087, 1519
HindIII	AAGCTT	1 cut(s)	803
HpaI	GTTAAC	1 cut(s)	1519
HpaII	CCGG	9 cut(s)	287, 373, 384, 414, 998, 1055, 1206, 1346, 1427
HphI	GGTGA	7 cut(s)	388, 894, 962, 1335, 1427, 1657, 1903
Hpy166II	GTNNAC	7 cut(s)	48, 221, 295, 616, 1087, 1112, 1519
Hpy188I	TCNGA	9 cut(s)	85, 328, 516, 1023, 1068, 1819, 1900, 1921, 2069
Hpy8I	GTNNAC	7 cut(s)	48, 221, 295, 616, 1087, 1112, 1519
Hpy99I	CGWCG	3 cut(s)	95, 128, 244
HpyAV	CCTTC	8 cut(s)	112, 344, 383, 1511, 1523, 1630, 1905, 2025
HpyCH4III	ACNGT	4 cut(s)	861, 900, 1109, 1873
HpyCH4IV	ACGT	2 cut(s)	217, 689
HpyF3I	CTNAG	4 cut(s)	753, 1020, 1152, 1848
HpySE526I	ACGT	2 cut(s)	217, 689
Hsp92I	GRCGYC	1 cut(s)	248
Hsp92II	CATG	9 cut(s)	118, 446, 466, 556, 749, 989, 1268, 1355, 1436
HspAI	GCGC	2 cut(s)	248, 1810
KasI	GGCGCC	1 cut(s)	247
Kpn2I	TCCGGA	1 cut(s)	286
Ksp22I	TGATCA	3 cut(s)	432, 1261, 1942
KspAI	GTTAAC	1 cut(s)	1519
KspI	CCGCGG	1 cut(s)	254
LmnI	GCTCC	7 cut(s)	213, 1015, 1068, 1322, 1443, 1532, 1793
LweI	GCATC	9 cut(s)	387, 583, 739, 1014, 1165, 1227, 1454, 1927, 1954
MaeI	CTAG	6 cut(s)	72, 879, 1167, 1824, 1968, 1977
MaeII	ACGT	2 cut(s)	217, 689
MaeIII	GTNAC	4 cut(s)	900, 964, 1132, 1715
MbiI	CCGCTC	1 cut(s)	1071
MboII	GAAGA	7 cut(s)	433, 972, 1367, 1544, 1672, 1697, 1711
MfeI	CAATTG	2 cut(s)	401, 467
MflI	RGATCY	2 cut(s)	583, 1357
MhlI	GDGCHC	9 cut(s)	189, 210, 321, 1021, 1233, 1440, 1632, 1677, 1995
MlsI	TGGCCA	1 cut(s)	1781
MluNI	TGGCCA	1 cut(s)	1781
Mly113I	GGCGCC	1 cut(s)	248
MlyI	GAGTC	5 cut(s)	6, 49, 193, 812, 1121
Mox20I	TGGCCA	1 cut(s)	1781
MroI	TCCGGA	1 cut(s)	286
MroXI	GAANNNNTTC	1 cut(s)	1894
MscI	TGGCCA	1 cut(s)	1781
MseI	TTAA	6 cut(s)	774, 1461, 1518, 1728, 1785, 1806
MslI	CAYNNNNRTG	1 cut(s)	447
Msp20I	TGGCCA	1 cut(s)	1781
MspA1I	CMGCKG	3 cut(s)	253, 481, 1142
MspI	CCGG	9 cut(s)	287, 373, 384, 414, 998, 1055, 1206, 1346, 1427
MunI	CAATTG	2 cut(s)	401, 467
MvaI	CCWGG	3 cut(s)	110, 1014, 1604
MvnI	CGCG	1 cut(s)	253
NarI	GGCGCC	1 cut(s)	248
NciI	CCSGG	7 cut(s)	373, 374, 385, 414, 1056, 1206, 1428
NdeI	CATATG	1 cut(s)	1760
NheI	GCTAGC	1 cut(s)	1967
NlaIII	CATG	9 cut(s)	118, 446, 466, 556, 749, 989, 1268, 1355, 1436
NlaIV	GGNNCC	4 cut(s)	249, 318, 1294, 1767
NmeAIII	GCCGAG	1 cut(s)	160
NmuCI	GTSAC	2 cut(s)	900, 1715
NspI	RCATGY	1 cut(s)	556
NspV	TTCGAA	1 cut(s)	869
PaeR7I	CTCGAG	2 cut(s)	203, 533
PagI	TCATGA	5 cut(s)	114, 442, 745, 1264, 1351
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PdmI	GAANNNNTTC	1 cut(s)	1894
PfeI	GAWTC	8 cut(s)	424, 439, 511, 712, 871, 1702, 1879, 1916
PinAI	ACCGGT	1 cut(s)	1345
PleI	GAGTC	5 cut(s)	6, 49, 193, 812, 1121
PluTI	GGCGCC	1 cut(s)	251
PpsI	GAGTC	5 cut(s)	6, 49, 193, 812, 1121
PshBI	ATTAAT	1 cut(s)	1461
Psp124BI	GAGCTC	4 cut(s)	189, 210, 1440, 1632
Psp6I	CCWGG	3 cut(s)	108, 1012, 1602
PspFI	CCCAGC	3 cut(s)	59, 1138, 1313
PspGI	CCWGG	3 cut(s)	108, 1012, 1602
PspN4I	GGNNCC	4 cut(s)	249, 318, 1294, 1767
PspPI	GGNCC	4 cut(s)	78, 406, 1061, 1399
PsuI	RGATCY	2 cut(s)	583, 1357
PvuII	CAGCTG	2 cut(s)	481, 1142
RsaI	GTAC	4 cut(s)	617, 996, 1146, 1494
RsaNI	GTAC	4 cut(s)	616, 995, 1145, 1493
RseI	CAYNNNNRTG	1 cut(s)	447
SacI	GAGCTC	4 cut(s)	189, 210, 1440, 1632
SacII	CCGCGG	1 cut(s)	254
SaqAI	TTAA	6 cut(s)	774, 1461, 1518, 1728, 1785, 1806
Sau96I	GGNCC	4 cut(s)	78, 406, 1061, 1399
SchI	GAGTC	5 cut(s)	6, 49, 193, 812, 1121
SduI	GDGCHC	9 cut(s)	189, 210, 321, 1021, 1233, 1440, 1632, 1677, 1995
SfaNI	GCATC	9 cut(s)	387, 583, 739, 1014, 1165, 1227, 1454, 1927, 1954
SfoI	GGCGCC	1 cut(s)	249
Sfr274I	CTCGAG	2 cut(s)	203, 533
Sfr303I	CCGCGG	1 cut(s)	254
SfuI	TTCGAA	1 cut(s)	869
SgrBI	CCGCGG	1 cut(s)	254
SinI	GGWCC	2 cut(s)	78, 406
SlaI	CTCGAG	2 cut(s)	203, 533
SmaI	CCCGGG	1 cut(s)	374
SmiMI	CAYNNNNRTG	1 cut(s)	447
SmlI	CTYRAG	3 cut(s)	175, 203, 533
SmoI	CTYRAG	3 cut(s)	175, 203, 533
SspDI	GGCGCC	1 cut(s)	247
SspI	AATATT	2 cut(s)	359, 1099
SspMI	CTAG	6 cut(s)	72, 879, 1167, 1824, 1968, 1977
SstI	GAGCTC	4 cut(s)	189, 210, 1440, 1632
StyI	CCWWGG	1 cut(s)	603
TaaI	ACNGT	4 cut(s)	861, 900, 1109, 1873
TaiI	ACGT	2 cut(s)	220, 692
TaqII	GACCGA	1 cut(s)	66
TatI	WGTACW	1 cut(s)	615
TauI	GCSGC	2 cut(s)	253, 739
TfiI	GAWTC	8 cut(s)	424, 439, 511, 712, 871, 1702, 1879, 1916
Tru1I	TTAA	6 cut(s)	774, 1461, 1518, 1728, 1785, 1806
Tru9I	TTAA	6 cut(s)	774, 1461, 1518, 1728, 1785, 1806
TscAI	CASTG	4 cut(s)	1114, 1312, 1564, 1750
TseFI	GTSAC	2 cut(s)	900, 1715
Tsp45I	GTSAC	2 cut(s)	900, 1715
TspDTI	ATGAA	8 cut(s)	131, 431, 459, 512, 734, 1340, 1368, 1894
TspGWI	ACGGA	3 cut(s)	24, 362, 1734
TspMI	CCCGGG	1 cut(s)	372
TspRI	CASTG	4 cut(s)	1114, 1312, 1564, 1750
VpaK11BI	GGWCC	2 cut(s)	78, 406
VspI	ATTAAT	1 cut(s)	1461
XapI	RAATTY	5 cut(s)	35, 379, 865, 936, 1901
XbaI	TCTAGA	1 cut(s)	1976
XceI	RCATGY	1 cut(s)	556
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1505
XhoI	CTCGAG	2 cut(s)	203, 533
XmaI	CCCGGG	1 cut(s)	372
XmnI	GAANNNNTTC	1 cut(s)	1894
XspI	CTAG	6 cut(s)	72, 879, 1167, 1824, 1968, 1977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.