Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001142

Physical Location & Seq

Genomic Coordinates Reverse (-)

31114332 .. 31116410

Gene Structure 2079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG260300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGAGAACGGACTCGATTGGAGAATTGCGGAGAAATTTTCAGGGTTGACGAGGACTTCCAGCCCTGATCCTAGTCGGTCCTCCGAAACCGACGACATTGGCTTGTTCCAGGTCATGAAGGCCGTTGAAGCTGCCGAGGCCACCATCAAGAGACAGGTCGAGGAGAACATCCGCTTGAGGTCTGAGCTCGAATACAAGACTCTCGAGCTCCACAGACGTAAACAACTCCACGAACCATCATCGATGGCGCCGCTGTCGTCGTCTCTCGATCTGGTAGGATCGGCTCGTCCGGAAGTGAACAATTCAGGAGATAATCAACAAGCTGGGGCGCCCAATTCCGATAATGGGGGATACAGCACGGAAGGGGAATATTATGATCCGCCGCGGGTGAATTCCGGGGAAGGGTTGATGCGATTGGATCATCCCGGCGAGAAGAATCTTGTGATCAAGATTCATGAAAATGAGCAGGAGATCATGCAATTGCGGAAGCAGCTGGGGGATTACTCGATGAAAGAAGCACAGATTCGGAACGAAAAGCATGTTCTCGAGGGTCGCATTGCTTATATGCGTTTGGTATTTGATCAGCAGCAGCAGGATCTTGCTGATGCTGCTTCCAAGGCTCTGGTGTACAGGCAAGATATAATTGAGGAGAACATACGGCTGGCTTATGCTTTGCAGGATGTGCAGCAGGAGAGGACGACGTTCGTTTCGGCATTGCTGCCGATTCTGGCAGACTACTCATTGCAGCCGCAGGTTCATGATGCTCAGTCCATTGCCAGCAATGTTAAGATTTTGTTTAGGCATTTGCAGGAGAAGCTTATTATGACAGAGTCGAAATTGAAGCAGTTTCAGTATCAAGTAAGACCTTTACAGTCGAATTCGAATCAGTCTAGCACTAACAATACCCAACAGTCACCTCCATCTCATTCCATTGGTGCAGCATTGGAAATTTCCAACAAAGATAGGCTTGAAATGGTTACTCACCCGCCATCTTCCCATGAGAAAGTACCGGCTTCTCCTCCTCCTGGTGCTCAGATGCAGACAACCGCCCCGAATTGGGATCAATCGGGTGGCCCTCGGAGCGGTTCTGGTGGTGTTGACACAGGGAATATTGAACACAGTGAACCTCAAAACAGTAACTCTGTAACCCCAGCTGTACCTGCTAAGCCTACTATTGCTAGACTTGATGCAAATCGATATAGAGACGATACAACACCCGGAAAACAGGTCAAGTTTCGTGAGCCTGAGATGCAAACACACACAGATTATGATGATCATGACGAGGGATACAATGAGAGTGGAGGAACCTCTCCTTACACCGATCCCAGCTCCTCTTATCCTCGGTATCTATCACCGGTTCATGAAGATCTGTTTTTAGATGAGGATGATCCATTACCAGCCATTGAGGGCCTCCAGATTTCGGGTGAAGCATTACCGGGACATGAGCTCCAAGCATCTGGATACTCCATTAATGGAACAACCAGTTGCAACTTTGAGTGGGTACGCCACCTTCCAGATGGATCAGTTAACTACATTGAAGGAGCAAAGCAACCCAACTATCTTCTCACTGCTGATGATGTCGATACATACCTTGCTATCGAAGTTCAACCCCTGGATAACAGGAAGCGAAAGGGAGAGCTCGTGAAGGTGTTTGCAAACGATCACAAGAAGATCACTTGTGAGCCCGAAATGCAAAGCCAGATACAGAAGATTCTTCAGAAGGGTCATGGATCATTTAAGGTGTTTGAGAACACTGGGTTTCTTGACATATGGGAACCTGCCACTTTGGCCATTAAGAGGGGAGCCTACAGCATTAAGCGCAGCTCTGAACCTAGTGTTGGTGGAGTTGTGGTGGCTGAGAAGTTTTCGCCCAACACAATCGTTTCGATTCCTTACGGAAGCCCTTCGGAATTCATCATCACCGATTCTGATATTGCTGGTGCTGGTGCTGATCATCTTTTGAAAACAGACGATGCTAGCTGTTCTAGAGATACACTTGTGCTCATATTGAGATTATTTATCGTAAGGGCTGTTGAGAGAAGAACAAGGAAAGGGAAAAAAAGGGTCTTATTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

692

Amino Acids

77.02

Weight (kDa)

5.37

Isoelectric Point (pI)

53.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IG_AIR9	PF23197	469 - 550	1.1e-07	AIR9 A9 domain
DUF7046	PF23080	583 - 685	3.2e-27	Domain of unknown function (DUF7046)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08440 AT5G08440 AT5G08440 AT5G23490 AT5G23490 AT5G23490 AT5G23490 AT5G23510 AT5G23510 AT5G23510
fragaria_vesca	FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_1g25960 FvH4_3g21410 FvH4_7g23540
malus_domestica	MD03G1185400.v1.1 MD04G1186900.v1.1 MD11G1230900.v1.1
prunus_persica	Prupe.4G196300_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1 Prupe.4G288600_v2.0.a1
pyrus_communis	pycom03g16520 pycom03g16530
rosa_chinensis	RchiOBHm_Chr1g0368691 RchiOBHm_Chr3g0485101 RchiOBHm_Chr5g0036791
rosa_laevigata	RLG00000023166 RLG00000027197 RLG00000033721
rosa_multiflora	Rmu_co8159396.1_g000001 Rmu_sc0000399.1_g000002 Rmu_sc0006040.1_g000006 Rmu_sc0006040.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044160 Rroxscaffold_4G00288350 Rroxscaffold_6G00397190
rosa_rugosa	Rorug01G0343700 Rorug03G0216200 Rorug03G0216300
rosa_samantha	Rh3AG266300 Rh3BG301700 Rh3CG300000 Rh3DG295800 Rh5AG250300 Rh5BG252000 Rh5CG284000 Rh5DG260300
rosa_wichuraiana	Rw5G023020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	742, 1168, 1786
AccB1I	GGYRCC	2 cut(s)	247, 328
AccBSI	CCGCTC	1 cut(s)	1083
AccII	CGCG	1 cut(s)	385
AccIII	TCCGGA	1 cut(s)	289
AcoI	YGGCCR	1 cut(s)	1788
AcsI	RAATTY	5 cut(s)	35, 391, 877, 948, 1910
AcuI	CTGAAG	1 cut(s)	1700
AcyI	GRCGYC	2 cut(s)	248, 329
AfaI	GTAC	4 cut(s)	629, 1008, 1158, 1503
AfiI	CCNNNNNNNGG	9 cut(s)	345, 402, 1025, 1056, 1057, 1082, 1420, 1797, 1838
AgeI	ACCGGT	1 cut(s)	1354
AgsI	TTSAA	7 cut(s)	128, 841, 971, 1115, 1538, 1607, 1963
AjnI	CCWGG	3 cut(s)	108, 1024, 1611
AjuI	GAANNNNNNNTTGG	2 cut(s)	1821, 1853
Alw21I	GWGCWC	6 cut(s)	189, 210, 1033, 1449, 1641, 2004
Alw26I	GTCTC	3 cut(s)	145, 267, 1197
Ama87I	CYCGRG	2 cut(s)	203, 545
Aor13HI	TCCGGA	1 cut(s)	289
AoxI	GGCC	5 cut(s)	120, 138, 1072, 1408, 1788
ApoI	RAATTY	5 cut(s)	35, 391, 877, 948, 1910
ArsI	GACNNNNNNTTYG	2 cut(s)	691, 723
AseI	ATTAAT	1 cut(s)	1470
AsiGI	ACCGGT	1 cut(s)	1354
Asp700I	GAANNNNTTC	1 cut(s)	1903
AspLEI	GCGC	3 cut(s)	250, 331, 1821
AspS9I	GGNCC	3 cut(s)	78, 1073, 1408
AsuC2I	CCSGG	4 cut(s)	397, 426, 1218, 1437
AsuHPI	GGTGA	6 cut(s)	400, 906, 974, 1344, 1436, 1912
AsuII	TTCGAA	1 cut(s)	881
AsuNHI	GCTAGC	1 cut(s)	1976
AvaI	CYCGRG	2 cut(s)	203, 545
AvaII	GGWCC	1 cut(s)	78
BaeI	ACNNNNGTAYC	2 cut(s)	1983, 2016
BalI	TGGCCA	1 cut(s)	1790
BanI	GGYRCC	2 cut(s)	247, 328
BanII	GRGCYC	5 cut(s)	189, 210, 1449, 1641, 1686
BarI	GAAGNNNNNNTAC	2 cut(s)	1494, 1526
BauI	CACGAG	1 cut(s)	1640
Bbv12I	GWGCWC	6 cut(s)	189, 210, 1033, 1449, 1641, 2004
BccI	CCATC	6 cut(s)	152, 238, 244, 928, 997, 1511
BceAI	ACGGC	2 cut(s)	107, 674
BciT130I	CCWGG	3 cut(s)	110, 1026, 1613
BciVI	GTATCC	3 cut(s)	344, 1280, 1454
BclI	TGATCA	4 cut(s)	444, 580, 1273, 1951
BcnI	CCSGG	4 cut(s)	397, 426, 1218, 1437
BcoDI	GTCTC	3 cut(s)	145, 267, 1197
BfaI	CTAG	6 cut(s)	72, 891, 1179, 1833, 1977, 1986
BfmI	CTRYAG	1 cut(s)	1807
BfoI	RGCGCY	2 cut(s)	251, 332
BfuAI	ACCTGC	3 cut(s)	742, 1168, 1786
BfuI	GTATCC	3 cut(s)	344, 1280, 1454
BglI	GCCNNNNNGGC	1 cut(s)	1787
BglII	AGATCT	1 cut(s)	1366
BlpI	GCTNAGC	1 cut(s)	1164
Bme1390I	CCNGG	7 cut(s)	110, 397, 426, 1026, 1218, 1437, 1613
Bme18I	GGWCC	1 cut(s)	78
BmeT110I	CYCGRG	2 cut(s)	203, 545
BmgT120I	GGNCC	3 cut(s)	78, 1073, 1408
BmiI	GGNNCC	5 cut(s)	249, 330, 1306, 1776, 1804
BmrFI	CCNGG	7 cut(s)	110, 397, 426, 1026, 1218, 1437, 1613
BmrI	ACTGGG	1 cut(s)	1764
BmsI	GCATC	8 cut(s)	399, 595, 751, 1026, 1177, 1239, 1463, 1963
BmtI	GCTAGC	1 cut(s)	1980
BmuI	ACTGGG	1 cut(s)	1764
BpmI	CTGGAG	1 cut(s)	1397
Bpu1102I	GCTNAGC	1 cut(s)	1164
Bpu14I	TTCGAA	1 cut(s)	881
BpuEI	CTTGAG	1 cut(s)	196
BpuMI	CCSGG	4 cut(s)	397, 426, 1218, 1437
Bsa29I	ATCGAT	2 cut(s)	242, 1195
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaHI	GRCGYC	2 cut(s)	248, 329
BsaJI	CCNNGG	7 cut(s)	135, 383, 396, 615, 1076, 1340, 1611
BsaWI	WCCGGW	2 cut(s)	289, 1354
BsaXI	ACNNNNNCTCC	6 cut(s)	1431, 1461, 1626, 1656, 1836, 1866
Bsc4I	CCNNNNNNNGG	9 cut(s)	345, 402, 1025, 1056, 1057, 1082, 1420, 1797, 1838
Bse118I	RCCGGY	2 cut(s)	1009, 1354
Bse1I	ACTGG	2 cut(s)	1482, 1759
Bse3DI	GCAATG	5 cut(s)	555, 713, 740, 771, 787
Bse8I	GATNNNNATC	1 cut(s)	1191
BseAI	TCCGGA	1 cut(s)	289
BseBI	CCWGG	3 cut(s)	110, 1026, 1613
BseCI	ATCGAT	2 cut(s)	242, 1195
BseDI	CCNNGG	7 cut(s)	135, 383, 396, 615, 1076, 1340, 1611
BseGI	GGATG	4 cut(s)	168, 421, 685, 1390
BseJI	GATNNNNATC	1 cut(s)	1191
BseLI	CCNNNNNNNGG	9 cut(s)	345, 402, 1025, 1056, 1057, 1082, 1420, 1797, 1838
BseMI	GCAATG	5 cut(s)	555, 713, 740, 771, 787
BseMII	CTCAG	5 cut(s)	174, 779, 1046, 1236, 1848
BseNI	ACTGG	2 cut(s)	1482, 1759
BseRI	GAGGAG	5 cut(s)	176, 662, 1008, 1011, 1321
BseYI	CCCAGC	4 cut(s)	323, 493, 1150, 1325
BsgI	GTGCAG	2 cut(s)	704, 957
Bsh1236I	CGCG	1 cut(s)	385
BshFI	GGCC	5 cut(s)	122, 140, 1074, 1410, 1790
BshNI	GGYRCC	2 cut(s)	247, 328
BshTI	ACCGGT	1 cut(s)	1354
BshVI	ATCGAT	2 cut(s)	242, 1195
BsiHKAI	GWGCWC	6 cut(s)	189, 210, 1033, 1449, 1641, 2004
BsiHKCI	CYCGRG	2 cut(s)	203, 545
BsiSI	CCGG	7 cut(s)	290, 396, 426, 1010, 1218, 1355, 1436
BslFI	GGGAC	1 cut(s)	1452
BslI	CCNNNNNNNGG	9 cut(s)	345, 402, 1025, 1056, 1057, 1082, 1420, 1797, 1838
BsmAI	GTCTC	3 cut(s)	145, 267, 1197
BsmBI	CGTCTC	2 cut(s)	267, 1197
BsmFI	GGGAC	1 cut(s)	1452
BsnI	GGCC	5 cut(s)	122, 140, 1074, 1410, 1790
BsoBI	CYCGRG	2 cut(s)	203, 545
Bsp119I	TTCGAA	1 cut(s)	881
Bsp1286I	GDGCHC	7 cut(s)	189, 210, 1033, 1449, 1641, 1686, 2004
Bsp13I	TCCGGA	1 cut(s)	289
Bsp1407I	TGTACA	1 cut(s)	627
Bsp1720I	GCTNAGC	1 cut(s)	1164
BspANI	GGCC	5 cut(s)	122, 140, 1074, 1410, 1790
BspCNI	CTCAG	5 cut(s)	175, 778, 1045, 1237, 1849
BspDI	ATCGAT	2 cut(s)	242, 1195
BspEI	TCCGGA	1 cut(s)	289
BspFNI	CGCG	1 cut(s)	385
BspHI	TCATGA	5 cut(s)	114, 454, 757, 1276, 1360
BspLI	GGNNCC	5 cut(s)	249, 330, 1306, 1776, 1804
BspMI	ACCTGC	3 cut(s)	742, 1168, 1786
BspOI	GCTAGC	1 cut(s)	1980
BspT104I	TTCGAA	1 cut(s)	881
BspT107I	GGYRCC	2 cut(s)	247, 328
BsrBI	CCGCTC	1 cut(s)	1083
BsrDI	GCAATG	5 cut(s)	555, 713, 740, 771, 787
BsrFI	RCCGGY	2 cut(s)	1009, 1354
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	2 cut(s)	1482, 1759
BssAI	RCCGGY	2 cut(s)	1009, 1354
BssECI	CCNNGG	7 cut(s)	135, 383, 396, 615, 1076, 1340, 1611
BssNI	GRCGYC	2 cut(s)	248, 329
BssSI	CACGAG	1 cut(s)	1640
BssT1I	CCWWGG	1 cut(s)	615
Bst2BI	CACGAG	1 cut(s)	1640
Bst2UI	CCWGG	3 cut(s)	110, 1026, 1613
Bst4CI	ACNGT	4 cut(s)	873, 912, 1121, 1136
BstACI	GRCGYC	2 cut(s)	248, 329
BstAPI	GCANNNNNTGC	1 cut(s)	682
BstAUI	TGTACA	1 cut(s)	627
BstBI	TTCGAA	1 cut(s)	881
BstC8I	GCNNGC	3 cut(s)	663, 778, 1978
BstDEI	CTNAG	6 cut(s)	183, 765, 1032, 1164, 1245, 1857
BstDSI	CCRYGG	1 cut(s)	383
BstF5I	GGATG	4 cut(s)	168, 421, 685, 1390
BstFNI	CGCG	1 cut(s)	385
BstH2I	RGCGCY	2 cut(s)	251, 332
BstHHI	GCGC	3 cut(s)	250, 331, 1821
BstMAI	GTCTC	3 cut(s)	145, 267, 1197
BstNI	CCWGG	3 cut(s)	110, 1026, 1613
BstNSI	RCATGY	1 cut(s)	542
BstSCI	CCNGG	7 cut(s)	108, 395, 424, 1024, 1216, 1435, 1611
BstSFI	CTRYAG	1 cut(s)	1807
BstUI	CGCG	1 cut(s)	385
BstX2I	RGATCY	2 cut(s)	595, 1366
BstXI	CCANNNNNNTGG	2 cut(s)	622, 1457
BstYI	RGATCY	2 cut(s)	595, 1366
Bsu15I	ATCGAT	2 cut(s)	242, 1195
BsuI	GTATCC	3 cut(s)	344, 1280, 1454
BsuRI	GGCC	5 cut(s)	122, 140, 1074, 1410, 1790
BsuTUI	ATCGAT	2 cut(s)	242, 1195
BtgI	CCRYGG	1 cut(s)	383
BtsCI	GGATG	4 cut(s)	168, 421, 685, 1390
BtsI	GCAGTG	1 cut(s)	1566
BtsIMutI	CAGTG	3 cut(s)	1126, 1566, 1752
BveI	ACCTGC	3 cut(s)	742, 1168, 1786
Cac8I	GCNNGC	3 cut(s)	663, 778, 1978
CciI	TCATGA	5 cut(s)	114, 454, 757, 1276, 1360
CfoI	GCGC	3 cut(s)	250, 331, 1821
Cfr10I	RCCGGY	2 cut(s)	1009, 1354
Cfr13I	GGNCC	3 cut(s)	78, 1073, 1408
Cfr42I	CCGCGG	1 cut(s)	386
ClaI	ATCGAT	2 cut(s)	242, 1195
Csp6I	GTAC	4 cut(s)	628, 1007, 1157, 1502
CspAI	ACCGGT	1 cut(s)	1354
CspCI	CAANNNNNGTGG	2 cut(s)	1279, 1314
CviQI	GTAC	4 cut(s)	628, 1007, 1157, 1502
DdeI	CTNAG	6 cut(s)	183, 765, 1032, 1164, 1245, 1857
DinI	GGCGCC	2 cut(s)	249, 330
EaeI	YGGCCR	1 cut(s)	1788
EciI	GGCGGA	1 cut(s)	369
Ecl136II	GAGCTC	4 cut(s)	187, 208, 1447, 1639
Eco130I	CCWWGG	1 cut(s)	615
Eco24I	GRGCYC	5 cut(s)	189, 210, 1449, 1641, 1686
Eco47I	GGWCC	1 cut(s)	78
Eco53kI	GAGCTC	4 cut(s)	187, 208, 1447, 1639
Eco57I	CTGAAG	1 cut(s)	1700
Eco88I	CYCGRG	2 cut(s)	203, 545
EcoICRI	GAGCTC	4 cut(s)	187, 208, 1447, 1639
EcoO109I	RGGNCCY	1 cut(s)	1408
EcoRI	GAATTC	3 cut(s)	391, 877, 1910
EcoRII	CCWGG	3 cut(s)	108, 1024, 1611
EcoT14I	CCWWGG	1 cut(s)	615
EcoT38I	GRGCYC	5 cut(s)	189, 210, 1449, 1641, 1686
EgeI	GGCGCC	2 cut(s)	249, 330
EheI	GGCGCC	2 cut(s)	249, 330
ErhI	CCWWGG	1 cut(s)	615
Esp3I	CGTCTC	2 cut(s)	267, 1197
FalI	AAGNNNNNCTT	2 cut(s)	951, 983
FaqI	GGGAC	1 cut(s)	1452
FauI	CCCGC	2 cut(s)	378, 993
FauNDI	CATATG	1 cut(s)	1769
FbaI	TGATCA	4 cut(s)	444, 580, 1273, 1951
FokI	GGATG	4 cut(s)	155, 408, 692, 1397
FriOI	GRGCYC	5 cut(s)	189, 210, 1449, 1641, 1686
FspBI	CTAG	6 cut(s)	72, 891, 1179, 1833, 1977, 1986
GlaI	GCGC	3 cut(s)	249, 330, 1820
GsaI	CCCAGC	4 cut(s)	327, 497, 1154, 1329
GsuI	CTGGAG	1 cut(s)	1397
HaeII	RGCGCY	2 cut(s)	251, 332
HaeIII	GGCC	5 cut(s)	122, 140, 1074, 1410, 1790
HapII	CCGG	7 cut(s)	290, 396, 426, 1010, 1218, 1355, 1436
HhaI	GCGC	3 cut(s)	250, 331, 1821
Hin1I	GRCGYC	2 cut(s)	248, 329
Hin6I	GCGC	3 cut(s)	248, 329, 1819
HinP1I	GCGC	3 cut(s)	248, 329, 1819
HincII	GTYRAC	3 cut(s)	48, 1099, 1528
HindII	GTYRAC	3 cut(s)	48, 1099, 1528
HindIII	AAGCTT	1 cut(s)	815
HpaI	GTTAAC	1 cut(s)	1528
HpaII	CCGG	7 cut(s)	290, 396, 426, 1010, 1218, 1355, 1436
HphI	GGTGA	6 cut(s)	400, 906, 974, 1344, 1436, 1912
Hpy166II	GTNNAC	7 cut(s)	48, 221, 298, 628, 1099, 1124, 1528
Hpy8I	GTNNAC	7 cut(s)	48, 221, 298, 628, 1099, 1124, 1528
Hpy99I	CGWCG	3 cut(s)	95, 262, 703
HpyAV	CCTTC	8 cut(s)	112, 356, 395, 1520, 1532, 1639, 1714, 1914
HpyCH4III	ACNGT	4 cut(s)	873, 912, 1121, 1136
HpyCH4IV	ACGT	2 cut(s)	217, 701
HpyF3I	CTNAG	6 cut(s)	183, 765, 1032, 1164, 1245, 1857
HpySE526I	ACGT	2 cut(s)	217, 701
Hsp92I	GRCGYC	2 cut(s)	248, 329
HspAI	GCGC	3 cut(s)	248, 329, 1819
KasI	GGCGCC	2 cut(s)	247, 328
Kpn2I	TCCGGA	1 cut(s)	289
Ksp22I	TGATCA	4 cut(s)	444, 580, 1273, 1951
KspAI	GTTAAC	1 cut(s)	1528
KspI	CCGCGG	1 cut(s)	386
LmnI	GCTCC	6 cut(s)	213, 1080, 1334, 1452, 1541, 1802
LweI	GCATC	8 cut(s)	399, 595, 751, 1026, 1177, 1239, 1463, 1963
MaeI	CTAG	6 cut(s)	72, 891, 1179, 1833, 1977, 1986
MaeII	ACGT	2 cut(s)	217, 701
MaeIII	GTNAC	4 cut(s)	912, 976, 1136, 1144
MbiI	CCGCTC	1 cut(s)	1083
MboII	GAAGA	8 cut(s)	445, 984, 1376, 1553, 1681, 1706, 1720, 2052
MfeI	CAATTG	1 cut(s)	479
MflI	RGATCY	2 cut(s)	595, 1366
MhlI	GDGCHC	7 cut(s)	189, 210, 1033, 1449, 1641, 1686, 2004
MlsI	TGGCCA	1 cut(s)	1790
MluNI	TGGCCA	1 cut(s)	1790
Mly113I	GGCGCC	2 cut(s)	248, 329
MlyI	GAGTC	3 cut(s)	6, 193, 839
MmeI	TCCRAC	1 cut(s)	978
Mox20I	TGGCCA	1 cut(s)	1790
MroI	TCCGGA	1 cut(s)	289
MroXI	GAANNNNTTC	1 cut(s)	1903
MscI	TGGCCA	1 cut(s)	1790
MseI	TTAA	6 cut(s)	786, 1470, 1527, 1737, 1794, 1815
MslI	CAYNNNNRTG	1 cut(s)	459
Msp20I	TGGCCA	1 cut(s)	1790
MspA1I	CMGCKG	4 cut(s)	253, 385, 493, 1154
MspI	CCGG	7 cut(s)	290, 396, 426, 1010, 1218, 1355, 1436
MspR9I	CCNGG	7 cut(s)	110, 397, 426, 1026, 1218, 1437, 1613
MunI	CAATTG	1 cut(s)	479
MvaI	CCWGG	3 cut(s)	110, 1026, 1613
MvnI	CGCG	1 cut(s)	385
NarI	GGCGCC	2 cut(s)	248, 329
NciI	CCSGG	4 cut(s)	397, 426, 1218, 1437
NdeI	CATATG	1 cut(s)	1769
NheI	GCTAGC	1 cut(s)	1976
NlaIV	GGNNCC	5 cut(s)	249, 330, 1306, 1776, 1804
NmeAIII	GCCGAG	1 cut(s)	160
NmuCI	GTSAC	1 cut(s)	912
NspI	RCATGY	1 cut(s)	542
NspV	TTCGAA	1 cut(s)	881
PaeR7I	CTCGAG	2 cut(s)	203, 545
PagI	TCATGA	5 cut(s)	114, 454, 757, 1276, 1360
PdmI	GAANNNNTTC	1 cut(s)	1903
PfeI	GAWTC	8 cut(s)	436, 451, 523, 724, 883, 1711, 1888, 1925
PflFI	GACNNNGTC	1 cut(s)	829
PinAI	ACCGGT	1 cut(s)	1354
PleI	GAGTC	3 cut(s)	6, 193, 838
PluTI	GGCGCC	2 cut(s)	251, 332
PpsI	GAGTC	3 cut(s)	6, 193, 838
PshBI	ATTAAT	1 cut(s)	1470
Psp124BI	GAGCTC	4 cut(s)	189, 210, 1449, 1641
Psp6I	CCWGG	3 cut(s)	108, 1024, 1611
PspFI	CCCAGC	4 cut(s)	323, 493, 1150, 1325
PspGI	CCWGG	3 cut(s)	108, 1024, 1611
PspN4I	GGNNCC	5 cut(s)	249, 330, 1306, 1776, 1804
PspPI	GGNCC	3 cut(s)	78, 1073, 1408
PsuI	RGATCY	2 cut(s)	595, 1366
PsyI	GACNNNGTC	1 cut(s)	829
PvuII	CAGCTG	2 cut(s)	493, 1154
RsaI	GTAC	4 cut(s)	629, 1008, 1158, 1503
RsaNI	GTAC	4 cut(s)	628, 1007, 1157, 1502
RseI	CAYNNNNRTG	1 cut(s)	459
SacI	GAGCTC	4 cut(s)	189, 210, 1449, 1641
SacII	CCGCGG	1 cut(s)	386
SaqAI	TTAA	6 cut(s)	786, 1470, 1527, 1737, 1794, 1815
Sau96I	GGNCC	3 cut(s)	78, 1073, 1408
SchI	GAGTC	3 cut(s)	6, 193, 839
ScrFI	CCNGG	7 cut(s)	110, 397, 426, 1026, 1218, 1437, 1613
SduI	GDGCHC	7 cut(s)	189, 210, 1033, 1449, 1641, 1686, 2004
SfaNI	GCATC	8 cut(s)	399, 595, 751, 1026, 1177, 1239, 1463, 1963
SfcI	CTRYAG	1 cut(s)	1807
SfoI	GGCGCC	2 cut(s)	249, 330
Sfr274I	CTCGAG	2 cut(s)	203, 545
Sfr303I	CCGCGG	1 cut(s)	386
SfuI	TTCGAA	1 cut(s)	881
SgrBI	CCGCGG	1 cut(s)	386
SinI	GGWCC	1 cut(s)	78
SlaI	CTCGAG	2 cut(s)	203, 545
SmiMI	CAYNNNNRTG	1 cut(s)	459
SmlI	CTYRAG	3 cut(s)	175, 203, 545
SmoI	CTYRAG	3 cut(s)	175, 203, 545
SspDI	GGCGCC	2 cut(s)	247, 328
SspI	AATATT	2 cut(s)	371, 1111
SspMI	CTAG	6 cut(s)	72, 891, 1179, 1833, 1977, 1986
SstI	GAGCTC	4 cut(s)	189, 210, 1449, 1641
StyD4I	CCNGG	7 cut(s)	108, 395, 424, 1024, 1216, 1435, 1611
StyI	CCWWGG	1 cut(s)	615
TaaI	ACNGT	4 cut(s)	873, 912, 1121, 1136
TaiI	ACGT	2 cut(s)	220, 704
TaqII	GACCGA	1 cut(s)	66
TatI	WGTACW	1 cut(s)	627
TauI	GCSGC	3 cut(s)	253, 385, 751
TfiI	GAWTC	8 cut(s)	436, 451, 523, 724, 883, 1711, 1888, 1925
Tru1I	TTAA	6 cut(s)	786, 1470, 1527, 1737, 1794, 1815
Tru9I	TTAA	6 cut(s)	786, 1470, 1527, 1737, 1794, 1815
TscAI	CASTG	3 cut(s)	1126, 1573, 1759
TseFI	GTSAC	1 cut(s)	912
Tsp45I	GTSAC	1 cut(s)	912
TspDTI	ATGAA	8 cut(s)	131, 443, 471, 524, 746, 1349, 1377, 1903
TspGWI	ACGGA	3 cut(s)	24, 374, 1911
TspRI	CASTG	3 cut(s)	1126, 1573, 1759
Tth111I	GACNNNGTC	1 cut(s)	829
VpaK11BI	GGWCC	1 cut(s)	78
VspI	ATTAAT	1 cut(s)	1470
XapI	RAATTY	5 cut(s)	35, 391, 877, 948, 1910
XbaI	TCTAGA	1 cut(s)	1985
XceI	RCATGY	1 cut(s)	542
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1514
XhoI	CTCGAG	2 cut(s)	203, 545
XmnI	GAANNNNTTC	1 cut(s)	1903
XspI	CTAG	6 cut(s)	72, 891, 1179, 1833, 1977, 1986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.