AT5G36657

Prolamin-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
14383877 .. 14384176
300 bp
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UTR
Exon/CDS
Intron
AT5G36657.1

Sequence Viewer

Length: 300 bp
ATGCTCAATTGCCTCAGTTTCCGGCTCAACTTCCTTTTTCTGTTTCCGTTCCAACTGATTCCTGGATTACCTGATATAACAAAATGTTTCTCATCCGTGATGGATATTCCTGGATGCATTGCAGAGATTTCTCAATCTATTTTCACTGGAAAGTTCGGTAATTTAGGTCCGGCTTGTTGCAAAGCATTTTTGGACACCGATAATTGCAAACCGAAAATTCCATTCATTCCATTTTTTCCTCCGATGCTAAAGGAACAATGTTCAAGAGTTGCCGGTGCAACTCCTCCCATACCAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

99

Amino Acids

10.9

Weight (kDa)

8.54

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prolamin_like PF05617 28 - 88 5.4e-09 Prolamin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 216
AgsI TTSAA 1 cut(s) 264
AjnI CCWGG 2 cut(s) 61, 109
ApoI RAATTY 1 cut(s) 216
AspS9I GGNCC 1 cut(s) 167
AvaII GGWCC 1 cut(s) 167
BccI CCATC 1 cut(s) 94
BciT130I CCWGG 2 cut(s) 63, 111
Bme1390I CCNGG 2 cut(s) 63, 111
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 1 cut(s) 167
BmrFI CCNGG 2 cut(s) 63, 111
BmsI GCATC 2 cut(s) 104, 234
Bse118I RCCGGY 1 cut(s) 272
Bse1I ACTGG 1 cut(s) 151
Bse3DI GCAATG 1 cut(s) 117
BseBI CCWGG 2 cut(s) 63, 111
BseGI GGATG 2 cut(s) 92, 119
BseMI GCAATG 1 cut(s) 117
BseMII CTCAG 1 cut(s) 28
BseNI ACTGG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 273
BsiSI CCGG 3 cut(s) 22, 170, 273
BspCNI CTCAG 1 cut(s) 27
BsrDI GCAATG 1 cut(s) 117
BsrFI RCCGGY 1 cut(s) 272
BsrI ACTGG 1 cut(s) 151
BssAI RCCGGY 1 cut(s) 272
Bst2UI CCWGG 2 cut(s) 63, 111
BstDEI CTNAG 1 cut(s) 14
BstF5I GGATG 2 cut(s) 92, 119
BstNI CCWGG 2 cut(s) 63, 111
BstSCI CCNGG 2 cut(s) 61, 109
BtsCI GGATG 2 cut(s) 92, 119
BtsIMutI CAGTG 1 cut(s) 144
Cfr10I RCCGGY 1 cut(s) 272
Cfr13I GGNCC 1 cut(s) 167
CviJI RGCY 2 cut(s) 25, 173
CviKI_1 RGCY 2 cut(s) 25, 173
DdeI CTNAG 1 cut(s) 14
Eco47I GGWCC 1 cut(s) 167
EcoRII CCWGG 2 cut(s) 61, 109
EcoT22I ATGCAT 1 cut(s) 119
FaiI YATR 2 cut(s) 77, 290
FokI GGATG 2 cut(s) 79, 126
HapII CCGG 3 cut(s) 22, 170, 273
HinfI GANTC 1 cut(s) 58
HpaII CCGG 3 cut(s) 22, 170, 273
Hpy188I TCNGA 1 cut(s) 243
Hpy188III TCNNGA 1 cut(s) 264
HpyCH4V TGCA 5 cut(s) 117, 122, 180, 207, 278
HpyF3I CTNAG 1 cut(s) 14
LpnPI CCDG 9 cut(s) 35, 48, 75, 84, 96, 123, 132, 183, 286
LweI GCATC 2 cut(s) 104, 234
MfeI CAATTG 1 cut(s) 7
MluCI AATT 4 cut(s) 7, 160, 202, 216
MmeI TCCRAC 1 cut(s) 76
MnlI CCTC 3 cut(s) 23, 249, 294
Mph1103I ATGCAT 1 cut(s) 119
MspI CCGG 3 cut(s) 22, 170, 273
MspR9I CCNGG 2 cut(s) 63, 111
MunI CAATTG 1 cut(s) 7
MvaI CCWGG 2 cut(s) 63, 111
NsiI ATGCAT 1 cut(s) 119
PfeI GAWTC 1 cut(s) 58
PfoI TCCNGGA 2 cut(s) 61, 109
Psp6I CCWGG 2 cut(s) 61, 109
PspGI CCWGG 2 cut(s) 61, 109
PspPI GGNCC 1 cut(s) 167
Sau96I GGNCC 1 cut(s) 167
ScrFI CCNGG 2 cut(s) 63, 111
SetI ASST 2 cut(s) 73, 169
SfaNI GCATC 2 cut(s) 104, 234
SinI GGWCC 1 cut(s) 167
Sse9I AATT 4 cut(s) 7, 160, 202, 216
StyD4I CCNGG 2 cut(s) 61, 109
TasI AATT 4 cut(s) 7, 160, 202, 216
TfiI GAWTC 1 cut(s) 58
TscAI CASTG 1 cut(s) 151
TspDTI ATGAA 1 cut(s) 214
TspGWI ACGGA 2 cut(s) 36, 85
TspRI CASTG 1 cut(s) 151
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 1 cut(s) 216
XcmI CCANNNNNNNNNTGG 1 cut(s) 59
Zsp2I ATGCAT 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.