Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003877

Physical Location & Seq

Genomic Coordinates Forward (+)

20458939 .. 20461710

Gene Structure 2772 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G50280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGTCCATGGCGTCTTCTTCTCTTGCGACCCAATCCTTTTTTTCTTCCTTTCCTCTATCTCACCGACTTCACTTCCCTGTACCTTATCTTCTTCTTCGTTCTTCTTTCTTTCGAAAACCACTTAGTCTCTCTGCTACTTCCCCTTCGTCATCTTCTTCTTCTCCTTCCATTTTCCTCTCCTGCTTCGATGACGCTTTGCCAGATAAGATCCAACAACCAGAAAATTCGACAATCAATAGCGAAGAAAGTGAATGTGAAGAAGAAGATGATGAAGAAGGAGATGATTTCACAGACCCAATTCTTAAATTCTTCAAGTCACGAACTTTAACATCAGAATCAACTGCAGACCCAGCTCGAGAATCCAAATTCTCCCTCCAGAAGAATCGTCGAACTTCCTGGCATTTAGCTCCAGACTTCGCTGACCCCGAAACTGAAATCGAGTCTAAGCCTGAGGAATCCGTCTTTGTGACAAACCAACAAACACTTGGTGTGCATATTCCATTCGAAAGTGGCGTCGCTAGGGAAATCTTGGAACTTGCTAAGAATTTGAAAGAGAATCAAACTTTGGGAGAGATGTTATCAGGTTTCGAAAGAAGGGTTAGTGATACAGAGTGTGTAGAGGCATTAGTGATGATGGGTGAATCTGGTTTTGTGAAGAGTTGTCTATATTTCTATGAGTGGATGAGTTTACAAGAACCTTCCCTTGCTTCGCCTCGTGCTTGCTCTGTGTTGTTTACATTGCTCGGTAGAGAAAGAATGGCTGATTACATTCTGCTTCTGCTAAGTAATTTACCAGATAAGGAAGAGTTTAGAGATGTTCGTCTCTACAATGCCGCCATTTCTGGTCTCTCAGCTTCTCAAAGGTATGATGATGCTTGGGAAGTGTATGAAGCTATGGATAAGATCAATGTGTATCCGGACAATGTTACATGTGCTATATTGATCACAACCTTGAGGAAAGCAGGACGAAGTGCGAAAGAAGTTTGGGAGATATTCGAGAAGATGAGTGAGAAAGGTGTGAAGTGGAGTCAGGATGTTTTCGGTGGCCTTGTGAAGTCGTTTTGTGATGAAGGGCTTAAAGAAGAAGCTCTTGTGATTCAAACAGAGATGGAGAAGAAAGGTATCCGTTCAAACACGATTGTGTATAATACGTTGATGGATGCTTACAACAAATCCAACCACATAGAAGAAGTGGAAGGTCTTTTTACTGAAATGAGAGATAAAGGCTTGAAGCCTTCGGCTGCAACTTATAACATTCTTATGGATGCTTATGCTAGAAGGATGCAGCCTGATATCGTTGAGACACTTCTGCGGGAGATGGAGGATTTAGGTTTAGAGCCAAATGTGAAATCGTACACGTGTTTGATTAGTGCGTATGGGAGGACGAAGAAGATGAGTGATATGGCTGCTGATGCTTTCCTGCGGATGAAGAAAGTAGGTTTGAAACCTTCTTCACATTCTTACACAGCTCTTATTCATGCTTACTCGGTTAGCGGGTGGCACGAAAAAGCTTATGCTTCCTTTGAAGAGATGTGTAAGGAGGGGATTAAACCGTCGGTTGAAACATACACATCAGTTCTTGATGCATTCAGACGATCAGGCGACACTGGAAAGCTGATGGAAATTTGGAAACTAATGCTGAGAGAAAAAATCAAAGGGACACGGATAACATATAACACTCTTCTCGATGGGTTTGCCAAGCAAGGACTCTACATTGAAGCAAGGGATGTTGTATCTGAGTTTAGTAAAATGGGTTTGCAGCCGAGTGTCATGACTTACAATATGCTGATGAATGCATACGCACGGGGAGGACAAGATGCAAAACTGCCGCAACTGTTGAAGGAAATGGCTGCTCTTAACTTAAAACCTGATTCCATCACATATTCAACAATGATCTACGCGTTTGTTCGTGTTCGAGACTTCAAAAGGGCATTCTTTTACCACAAGATGATGGTTAAAAGCGGGCAAGTACCAGACCCAAGGTCCTATGAGAAACTTAGGGCGATTCTGGAAGACAAGGCAAAGACAAAGAACAGAAAGGATAAGACTGCCATACTTGGTATAATTAATAGCAAATTCGGTCGGGTTAAAGCTAAGACGAAGGGGAAGAAAGATGAGTTTTGGAAGTACAAGACGAATCGAACTACTTCTCCTGGTCGTCACCGATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

723

Amino Acids

82.17

Weight (kDa)

6.84

Isoelectric Point (pI)

53.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	272 - 318	5.4e-09	PPR repeat family
PPR_long	PF17177	363 - 507	6.8e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	366 - 425	9.5e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	378 - 426	1.2e-14	PPR repeat family
PPR	PF01535	381 - 410	2.4e-06	PPR repeat
PPR_2	PF13041	415 - 459	9e-10	PPR repeat family
PPR_3	PF13812	436 - 495	1.9e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	447 - 495	6.5e-10	PPR repeat family
TPR_24	PF23276	465 - 534	3.6e-06	Fungal tetratrico peptide repeats
PPR_long	PF17177	467 - 569	6.7e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	483 - 530	3.1e-11	PPR repeat family
PPR	PF01535	487 - 516	9.9e-06	PPR repeat
PPR_3	PF13812	508 - 565	8.5e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	521 - 567	6.8e-07	PPR repeat family
PPR_2	PF13041	556 - 602	3e-10	PPR repeat family
PPR_3	PF13812	556 - 600	2.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	588 - 636	3.6e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50280
fragaria_vesca	FvH4_5g07010 FvH4_5g07010
malus_domestica	MD06G1160200.v1.1
prunus_persica	Prupe.5G160200_v2.0.a1
pyrus_communis	pycom06g14320
rosa_chinensis	RchiOBHm_Chr2g0103631 RchiOBHm_Chr7g0191671
rosa_laevigata	RLG00000004435 RLG00000016595 RLG00000030786
rosa_multiflora	Rmu_co8329853.1_g000001 Rmu_co8381307.1_g000001 Rmu_sc0001123.1_g000010 Rmu_sc0001530.1_g000019 Rmu_sc0001852.1_g000012 Rmu_sc0018746.1_g000006
rosa_roxburghii	Rroxscaffold_157G00438490 Rroxscaffold_3G00263660
rosa_rugosa	Rorug02G0116400 Rorug06G0510800
rosa_samantha	Rh2AG102000 Rh2BG023000 Rh2DG103300 Rh2DG170000 Rh3CG338800 Rh6BG097500 Rh7AG119800 Rh7AG120000 Rh7BG122100 Rh7BG214500 Rh7CG124700 Rh7DG122900
rosa_wichuraiana	Rw7G010220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1251
AccII	CGCG	1 cut(s)	1901
AccIII	TCCGGA	1 cut(s)	916
AciI	CCGC	6 cut(s)	834, 1312, 1423, 1494, 1829, 1962
AclWI	GGATC	1 cut(s)	202
AcsI	RAATTY	6 cut(s)	223, 305, 365, 544, 1623, 2075
AcvI	CACGTG	1 cut(s)	1359
AcyI	GRCGYC	2 cut(s)	11, 513
AdeI	CACNNNGTG	1 cut(s)	488
AfaI	GTAC	4 cut(s)	81, 1355, 1971, 2129
AflIII	ACRYGT	4 cut(s)	929, 1356, 1358, 1899
AhdI	GACNNNNNGTC	1 cut(s)	1981
AjnI	CCWGG	2 cut(s)	395, 2152
AjuI	GAANNNNNNNTTGG	2 cut(s)	548, 580
AleI	CACNNNNGTG	1 cut(s)	1139
AloI	GAACNNNNNNTCC	2 cut(s)	2134, 2166
AluBI	AGCT	9 cut(s)	353, 407, 854, 893, 1088, 1469, 1511, 1615, 2093
AluI	AGCT	9 cut(s)	353, 407, 854, 893, 1088, 1469, 1511, 1615, 2093
Alw26I	GTCTC	5 cut(s)	131, 827, 851, 1295, 1911
AlwI	GGATC	1 cut(s)	202
Ama87I	CYCGRG	1 cut(s)	354
Aor13HI	TCCGGA	1 cut(s)	916
AoxI	GGCC	1 cut(s)	1045
ApeKI	GCWGC	5 cut(s)	1241, 1285, 1406, 1759, 1850
ApoI	RAATTY	6 cut(s)	223, 305, 365, 544, 1623, 2075
ArsI	GACNNNNNNTTYG	2 cut(s)	498, 530
AseI	ATTAAT	1 cut(s)	2067
Asp700I	GAANNNNTTC	1 cut(s)	2146
AspS9I	GGNCC	1 cut(s)	1983
AsuHPI	GGTGA	3 cut(s)	53, 650, 2153
AsuII	TTCGAA	3 cut(s)	112, 504, 588
AvaI	CYCGRG	1 cut(s)	354
AvaII	GGWCC	1 cut(s)	1983
AxyI	CCTNAGG	1 cut(s)	450
BarI	GAAGNNNNNNTAC	2 cut(s)	72, 104
BauI	CACGAG	1 cut(s)	714
BbrPI	CACGTG	1 cut(s)	1359
BbsI	GAAGAC	2 cut(s)	6, 2019
BbvI	GCAGC	5 cut(s)	1228, 1297, 1393, 1771, 1837
BccI	CCATC	8 cut(s)	628, 1102, 1150, 1312, 1612, 1682, 1883, 1945
BcgI	CGANNNNNNTGC	2 cut(s)	1676, 1710
BciT130I	CCWGG	2 cut(s)	397, 2154
BciVI	GTATCC	2 cut(s)	924, 1133
BclI	TGATCA	1 cut(s)	942
BcoDI	GTCTC	5 cut(s)	131, 827, 851, 1295, 1911
BfaI	CTAG	2 cut(s)	519, 1275
BfmI	CTRYAG	1 cut(s)	342
BfuI	GTATCC	2 cut(s)	924, 1133
BisI	GCNGC	7 cut(s)	834, 1242, 1286, 1407, 1760, 1829, 1851
BlsI	GCNGC	7 cut(s)	835, 1243, 1287, 1408, 1761, 1830, 1852
Bme1390I	CCNGG	2 cut(s)	397, 2154
Bme18I	GGWCC	1 cut(s)	1983
BmeRI	GACNNNNNGTC	1 cut(s)	1981
BmeT110I	CYCGRG	1 cut(s)	354
BmgT120I	GGNCC	1 cut(s)	1983
BmrFI	CCNGG	2 cut(s)	397, 2154
BmsI	GCATC	7 cut(s)	862, 1150, 1255, 1272, 1402, 1573, 1807
BpiI	GAAGAC	2 cut(s)	6, 2019
BpmI	CTGGAG	2 cut(s)	359, 393
Bpu14I	TTCGAA	3 cut(s)	112, 504, 588
BpuEI	CTTGAG	1 cut(s)	973
BsaAI	YACGTR	1 cut(s)	1359
BsaHI	GRCGYC	2 cut(s)	11, 513
BsaI	GGTCTC	1 cut(s)	851
BsaJI	CCNNGG	2 cut(s)	6, 1979
BsaWI	WCCGGW	1 cut(s)	916
BsaXI	ACNNNNNCTCC	2 cut(s)	2134, 2164
Bse1I	ACTGG	1 cut(s)	1612
Bse21I	CCTNAGG	1 cut(s)	450
Bse3DI	GCAATG	1 cut(s)	737
BseAI	TCCGGA	1 cut(s)	916
BseBI	CCWGG	2 cut(s)	397, 2154
BseDI	CCNNGG	2 cut(s)	6, 1979
BseGI	GGATG	7 cut(s)	687, 1039, 1165, 1270, 1287, 1431, 1732
BseMI	GCAATG	1 cut(s)	737
BseMII	CTCAG	4 cut(s)	441, 864, 1631, 1728
BseNI	ACTGG	1 cut(s)	1612
BseXI	GCAGC	5 cut(s)	1228, 1297, 1393, 1771, 1837
BseYI	CCCAGC	1 cut(s)	349
Bsh1236I	CGCG	1 cut(s)	1901
Bsh1285I	CGRYCG	1 cut(s)	2083
BshFI	GGCC	1 cut(s)	1047
BsiEI	CGRYCG	1 cut(s)	2083
BsiHKCI	CYCGRG	1 cut(s)	354
BsiSI	CCGG	1 cut(s)	917
BslFI	GGGAC	1 cut(s)	1672
BsmAI	GTCTC	5 cut(s)	131, 827, 851, 1295, 1911
BsmBI	CGTCTC	1 cut(s)	827
BsmFI	GGGAC	1 cut(s)	1672
BsmI	GAATGC	3 cut(s)	1586, 1798, 1931
BsnI	GGCC	1 cut(s)	1047
Bso31I	GGTCTC	1 cut(s)	851
BsoBI	CYCGRG	1 cut(s)	354
Bsp119I	TTCGAA	3 cut(s)	112, 504, 588
Bsp13I	TCCGGA	1 cut(s)	916
Bsp143I	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	6 cut(s)	834, 1312, 1423, 1494, 1829, 1962
BspANI	GGCC	1 cut(s)	1047
BspCNI	CTCAG	4 cut(s)	442, 863, 1632, 1729
BspEI	TCCGGA	1 cut(s)	916
BspFNI	CGCG	1 cut(s)	1901
BspHI	TCATGA	1 cut(s)	1770
BspMAI	CTGCAG	1 cut(s)	346
BspPI	GGATC	1 cut(s)	202
BspT104I	TTCGAA	3 cut(s)	112, 504, 588
BspTNI	GGTCTC	1 cut(s)	851
BsrDI	GCAATG	1 cut(s)	737
BsrI	ACTGG	1 cut(s)	1612
BssECI	CCNNGG	2 cut(s)	6, 1979
BssMI	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
BssNI	GRCGYC	2 cut(s)	11, 513
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	2 cut(s)	6, 1979
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	2 cut(s)	397, 2154
Bst4CI	ACNGT	2 cut(s)	1554, 1836
Bst6I	CTCTTC	4 cut(s)	650, 798, 1521, 1686
BstACI	GRCGYC	2 cut(s)	11, 513
BstBAI	YACGTR	1 cut(s)	1359
BstBI	TTCGAA	3 cut(s)	112, 504, 588
BstC8I	GCNNGC	2 cut(s)	721, 1964
BstDSI	CCRYGG	1 cut(s)	6
BstF5I	GGATG	7 cut(s)	687, 1039, 1165, 1270, 1287, 1431, 1732
BstFNI	CGCG	1 cut(s)	1901
BstKTI	GATC	6 cut(s)	210, 906, 945, 1598, 1896, 2168
BstMAI	GTCTC	5 cut(s)	131, 827, 851, 1295, 1911
BstMBI	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
BstMCI	CGRYCG	1 cut(s)	2083
BstMWI	GCNNNNNNNGC	2 cut(s)	350, 1412
BstNI	CCWGG	2 cut(s)	397, 2154
BstNSI	RCATGY	1 cut(s)	933
BstSCI	CCNGG	2 cut(s)	395, 2152
BstSFI	CTRYAG	1 cut(s)	342
BstUI	CGCG	1 cut(s)	1901
BstV1I	GCAGC	5 cut(s)	1228, 1297, 1393, 1771, 1837
BstV2I	GAAGAC	2 cut(s)	6, 2019
BstX2I	RGATCY	1 cut(s)	207
BstYI	RGATCY	1 cut(s)	207
Bsu36I	CCTNAGG	1 cut(s)	450
BsuI	GTATCC	2 cut(s)	924, 1133
BsuRI	GGCC	1 cut(s)	1047
BtgI	CCRYGG	1 cut(s)	6
BtsCI	GGATG	7 cut(s)	687, 1039, 1165, 1270, 1287, 1431, 1732
BtsIMutI	CAGTG	1 cut(s)	1605
Cac8I	GCNNGC	2 cut(s)	721, 1964
CciI	TCATGA	1 cut(s)	1770
Cfr13I	GGNCC	1 cut(s)	1983
CseI	GACGC	2 cut(s)	200, 502
Csp6I	GTAC	4 cut(s)	80, 1354, 1970, 2128
CviAII	CATG	4 cut(s)	7, 930, 1478, 1771
CviQI	GTAC	4 cut(s)	80, 1354, 1970, 2128
DpnI	GATC	6 cut(s)	209, 905, 944, 1597, 1895, 2167
DpnII	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
DraIII	CACNNNGTG	1 cut(s)	488
DriI	GACNNNNNGTC	1 cut(s)	1981
Eam1104I	CTCTTC	4 cut(s)	650, 798, 1521, 1686
Eam1105I	GACNNNNNGTC	1 cut(s)	1981
EarI	CTCTTC	4 cut(s)	650, 798, 1521, 1686
Eco130I	CCWWGG	2 cut(s)	6, 1979
Eco31I	GGTCTC	1 cut(s)	851
Eco32I	GATATC	1 cut(s)	1294
Eco47I	GGWCC	1 cut(s)	1983
Eco72I	CACGTG	1 cut(s)	1359
Eco81I	CCTNAGG	1 cut(s)	450
Eco88I	CYCGRG	1 cut(s)	354
EcoO109I	RGGNCCY	1 cut(s)	1983
EcoRII	CCWGG	2 cut(s)	395, 2152
EcoRV	GATATC	1 cut(s)	1294
EcoT14I	CCWWGG	2 cut(s)	6, 1979
EcoT22I	ATGCAT	2 cut(s)	1588, 1798
ErhI	CCWWGG	2 cut(s)	6, 1979
Esp3I	CGTCTC	1 cut(s)	827
FaeI	CATG	4 cut(s)	10, 933, 1481, 1774
FalI	AAGNNNNNCTT	2 cut(s)	1074, 1106
FaqI	GGGAC	1 cut(s)	1672
FatI	CATG	4 cut(s)	6, 929, 1477, 1770
FauI	CCCGC	3 cut(s)	1305, 1487, 1955
FbaI	TGATCA	1 cut(s)	942
Fnu4HI	GCNGC	7 cut(s)	834, 1242, 1286, 1407, 1760, 1829, 1851
FokI	GGATG	7 cut(s)	694, 1046, 1172, 1277, 1294, 1438, 1739
Fsp4HI	GCNGC	7 cut(s)	834, 1242, 1286, 1407, 1760, 1829, 1851
FspBI	CTAG	2 cut(s)	519, 1275
GluI	GCNGC	7 cut(s)	834, 1242, 1286, 1407, 1760, 1829, 1851
GsaI	CCCAGC	1 cut(s)	353
GsuI	CTGGAG	2 cut(s)	359, 393
HaeIII	GGCC	1 cut(s)	1047
HapII	CCGG	1 cut(s)	917
HgaI	GACGC	2 cut(s)	200, 502
Hin1I	GRCGYC	2 cut(s)	11, 513
Hin1II	CATG	4 cut(s)	10, 933, 1481, 1774
HindIII	AAGCTT	1 cut(s)	1509
HpaII	CCGG	1 cut(s)	917
HphI	GGTGA	3 cut(s)	53, 650, 2153
Hpy166II	GTNNAC	3 cut(s)	689, 735, 1356
Hpy188I	TCNGA	3 cut(s)	334, 1592, 1738
Hpy8I	GTNNAC	3 cut(s)	689, 735, 1356
Hpy99I	CGWCG	3 cut(s)	390, 518, 1558
HpyCH4III	ACNGT	2 cut(s)	1554, 1836
HpyCH4IV	ACGT	2 cut(s)	1151, 1358
HpyCH4V	TGCA	8 cut(s)	344, 493, 1244, 1285, 1586, 1759, 1796, 1820
HpyF10VI	GCNNNNNNNGC	2 cut(s)	350, 1412
HpySE526I	ACGT	2 cut(s)	1151, 1358
Hsp92I	GRCGYC	2 cut(s)	11, 513
Hsp92II	CATG	4 cut(s)	10, 933, 1481, 1774
Kpn2I	TCCGGA	1 cut(s)	916
Ksp22I	TGATCA	1 cut(s)	942
Kzo9I	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
LmnI	GCTCC	1 cut(s)	412
Lsp1109I	GCAGC	5 cut(s)	1228, 1297, 1393, 1771, 1837
LweI	GCATC	7 cut(s)	862, 1150, 1255, 1272, 1402, 1573, 1807
MaeI	CTAG	2 cut(s)	519, 1275
MaeII	ACGT	2 cut(s)	1151, 1358
MaeIII	GTNAC	4 cut(s)	315, 466, 925, 2159
MalI	GATC	6 cut(s)	209, 905, 944, 1597, 1895, 2167
MboI	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
MflI	RGATCY	1 cut(s)	207
MluCI	AATT	9 cut(s)	223, 297, 305, 365, 544, 787, 1623, 2064, 2075
MluI	ACGCGT	1 cut(s)	1899
MlyI	GAGTC	3 cut(s)	449, 1036, 1701
MmeI	TCCRAC	2 cut(s)	235, 1200
Mph1103I	ATGCAT	2 cut(s)	1588, 1798
MroI	TCCGGA	1 cut(s)	916
MroXI	GAANNNNTTC	1 cut(s)	2146
MseI	TTAA	9 cut(s)	303, 326, 1077, 1548, 1857, 1862, 1956, 2067, 2088
MslI	CAYNNNNRTG	2 cut(s)	1139, 1259
MspI	CCGG	1 cut(s)	917
MspR9I	CCNGG	2 cut(s)	397, 2154
Mva1269I	GAATGC	3 cut(s)	1586, 1798, 1931
MvaI	CCWGG	2 cut(s)	397, 2154
MvnI	CGCG	1 cut(s)	1901
MwoI	GCNNNNNNNGC	2 cut(s)	350, 1412
NcoI	CCATGG	1 cut(s)	6
NdeII	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
NlaIII	CATG	4 cut(s)	10, 933, 1481, 1774
NmeAIII	GCCGAG	1 cut(s)	1788
NmuCI	GTSAC	3 cut(s)	315, 466, 2159
NsiI	ATGCAT	2 cut(s)	1588, 1798
NspI	RCATGY	1 cut(s)	933
NspV	TTCGAA	3 cut(s)	112, 504, 588
OliI	CACNNNNGTG	1 cut(s)	1139
PaeR7I	CTCGAG	1 cut(s)	354
PagI	TCATGA	1 cut(s)	1770
PciI	ACATGT	1 cut(s)	929
PcsI	WCGNNNNNNNCGW	2 cut(s)	423, 510
PctI	GAATGC	3 cut(s)	1586, 1798, 1931
PdmI	GAANNNNTTC	1 cut(s)	2146
PkrI	GCNGC	7 cut(s)	835, 1243, 1287, 1408, 1761, 1830, 1852
PleI	GAGTC	3 cut(s)	448, 1035, 1701
PmaCI	CACGTG	1 cut(s)	1359
PmlI	CACGTG	1 cut(s)	1359
PpsI	GAGTC	3 cut(s)	448, 1035, 1701
Ppu21I	YACGTR	1 cut(s)	1359
PpuMI	RGGWCCY	1 cut(s)	1983
PscI	ACATGT	1 cut(s)	929
PshBI	ATTAAT	1 cut(s)	2067
PsiI	TTATAA	1 cut(s)	1251
Psp5II	RGGWCCY	1 cut(s)	1983
Psp6I	CCWGG	2 cut(s)	395, 2152
PspCI	CACGTG	1 cut(s)	1359
PspFI	CCCAGC	1 cut(s)	349
PspGI	CCWGG	2 cut(s)	395, 2152
PspPI	GGNCC	1 cut(s)	1983
PspPPI	RGGWCCY	1 cut(s)	1983
PstI	CTGCAG	1 cut(s)	346
PsuI	RGATCY	1 cut(s)	207
RsaI	GTAC	4 cut(s)	81, 1355, 1971, 2129
RsaNI	GTAC	4 cut(s)	80, 1354, 1970, 2128
RseI	CAYNNNNRTG	2 cut(s)	1139, 1259
SaqAI	TTAA	9 cut(s)	303, 326, 1077, 1548, 1857, 1862, 1956, 2067, 2088
SatI	GCNGC	7 cut(s)	834, 1242, 1286, 1407, 1760, 1829, 1851
Sau3AI	GATC	6 cut(s)	207, 903, 942, 1595, 1893, 2165
Sau96I	GGNCC	1 cut(s)	1983
SchI	GAGTC	3 cut(s)	449, 1036, 1701
ScrFI	CCNGG	2 cut(s)	397, 2154
SfaNI	GCATC	7 cut(s)	862, 1150, 1255, 1272, 1402, 1573, 1807
SfcI	CTRYAG	1 cut(s)	342
Sfr274I	CTCGAG	1 cut(s)	354
SfuI	TTCGAA	3 cut(s)	112, 504, 588
SinI	GGWCC	1 cut(s)	1983
SlaI	CTCGAG	1 cut(s)	354
SmiMI	CAYNNNNRTG	2 cut(s)	1139, 1259
SmlI	CTYRAG	2 cut(s)	354, 952
SmoI	CTYRAG	2 cut(s)	354, 952
Sse9I	AATT	9 cut(s)	223, 297, 305, 365, 544, 787, 1623, 2064, 2075
SsiI	CCGC	6 cut(s)	834, 1312, 1423, 1494, 1829, 1962
SspMI	CTAG	2 cut(s)	519, 1275
StyD4I	CCNGG	2 cut(s)	395, 2152
StyI	CCWWGG	2 cut(s)	6, 1979
TaaI	ACNGT	2 cut(s)	1554, 1836
TaiI	ACGT	2 cut(s)	1154, 1361
TaqII	GACCGA	1 cut(s)	2069
TasI	AATT	9 cut(s)	223, 297, 305, 365, 544, 787, 1623, 2064, 2075
TatI	WGTACW	1 cut(s)	2127
TauI	GCSGC	2 cut(s)	836, 1831
Tru1I	TTAA	9 cut(s)	303, 326, 1077, 1548, 1857, 1862, 1956, 2067, 2088
Tru9I	TTAA	9 cut(s)	303, 326, 1077, 1548, 1857, 1862, 1956, 2067, 2088
TscAI	CASTG	1 cut(s)	1612
TseFI	GTSAC	3 cut(s)	315, 466, 2159
TseI	GCWGC	5 cut(s)	1241, 1285, 1406, 1759, 1850
Tsp45I	GTSAC	3 cut(s)	315, 466, 2159
TspDTI	ATGAA	6 cut(s)	285, 903, 1083, 1442, 1466, 1805
TspGWI	ACGGA	3 cut(s)	448, 1115, 1678
TspRI	CASTG	1 cut(s)	1612
VpaK11BI	GGWCC	1 cut(s)	1983
VspI	ATTAAT	1 cut(s)	2067
XapI	RAATTY	6 cut(s)	223, 305, 365, 544, 1623, 2075
XceI	RCATGY	1 cut(s)	933
XcmI	CCANNNNNNNNNTGG	1 cut(s)	482
XhoI	CTCGAG	1 cut(s)	354
XmnI	GAANNNNTTC	1 cut(s)	2146
XspI	CTAG	2 cut(s)	519, 1275
Zsp2I	ATGCAT	2 cut(s)	1588, 1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.