Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003877

Physical Location & Seq

Genomic Coordinates Forward (+)

4142826 .. 4146455

Gene Structure 3630 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g07010.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCTCTCCTACGGCAACAGCTCCCTCCTCCTCTCCCGCTTCCCTTAATTCACGGTCACTCTTCAACCCATGGTTTCCTTAAACCCTGTCTTTTTGGGCTCTCTAAAACCCTGAGACTCTTCTCTCTCTACTCAGCTCCTCCTATTCCAACTTCTAATTCCTCATCCTCCATTTTCCTTCCATTTCTCGAAGAAGAAGAAGAGGACCATGAAGAAGAAGAGGGTTTAGAGTCAGTTGCAGATGAAAAAGAAGAGGACCCAGATGACCCGATAGCCAGATTCTTCAAGTCTCGGACTTCAACCCAAGACCCACAGCGAGAAGGCAAGCTCTCTCTGCAGAAGAATCGTCGCTCTTCTTGGCACTTAGCTGACGACTTAGACGATTCCGAACCCGATTCCGGCGTCGACCCAGTGCCGGAAGTACAAGAACAACAACTGGGTCCGGTGAGTTCTGATTCAATTCCATTGGCAGATGGAATTGTGGGGCAGATTTTGCAGAAAGCTAGGAACTTGGGGCAGAATTTGACACTGGGAGAGGAGTTGGGAGGTTTTGAAGGGAGGGTTGGGGAGAAGGAGTGTGTGGAAGTTTTGGAGTTGATGGGTGAGGAGGGCTTGTTGATGGGTTGTTTGTATTTCTTTGAGTGGATGGGTTTGCAGGAGCCTTGTTTGGTTACTCCTAGAGCTTGTTCAGTTTTGTTTCCTATTTTGGGGAGAGCTGGAATGGGAGACAAGTTGGTGGTTTTGTTTAAGAACTTACCGGGTAAGGAGTTCAGGGATGTTCATGTTTATAATGCCGCAATTTCTGGCCTCATGTGCTCGAAAAGGTATGATGATGCTTGGAAGGTGTATGAGACGATGGAAGCTAATAATATCCTTCCGGATCATGTGACGTGTTCGATAATGATTACTATTATGCGGAAAATTGGTCGCAGTGCAAAAGATTCATGGGACTTCTTTGAGAGAATGAACAGGAAAGGTGTCAAATGGAGTCAGGAAGTTTTGGGTGCACTTATAAAATCGTTTTGTGATGAGGGGCTGAAGAGTGAAGCCCTTATCATTCAGATTGAAATGGAGAAGAAAGGGATCTCGTCAAATGCTATTGTATATAATACTTTAATGACCGCATTTTGTGATTCCAACCGGGTAGAAGAAGCTGAAGGCCTGTTTACTGAGATGAAATCAAGGGGAATTAAACCCACATCTCCCACCTTTAATATTCTGATGGATGCATACAGTAGAAGAATGCAGCCTGAGATTGTTGAAAAGCTTTTGGTAGAAATGCAGGAGATGGGGTTGGATCCAAATGTCAAATCCTATACATGTCTTGTTAGTGCGTATGGGAGGCAGAAGAATATGAGTGACATGGCTGCAGATGCATTTCTGAGGATGAAGAAAGTTGGTATTTGTCCCACTTCACATACGTATACAGCTCTTATCCATGCATATTCTGTCAGTGGCTGGCATGAGAAAGCTTACATCGCATTTGAGAACATGAAAAGGGAAGGACTAAAACCCTCCATAGAAACATATACTGCTTTACTGGATGCATTTAGGCGTGCGGGTGACACTGAGATGTTGATGAGAATTTGGAAATTGATGATCAAAGAGAAGGTTCAAGGGACTAAGGTGACATTCAACACTCTTCTTGATGGATTTTCTAAGCAAGGTCACTATCTTGAAGCAAGGGATGTGGTTTCTGAATTTGGGAATATGGGTTTGCAGCCAACAGTGATGACATATAATATGCTGATGAATGCATATGCACGTGGAGGGCAACACTCAAAGTTGCCACAGCTGTTGAAAGAGATGGAAGTTCTCAATTTGAAACCTGATTCTGTGACTTACTCAACCATGATCTATGCCTACATCCGCGTGCGTGATTTCTCAAGAGCATTTTTCTATCACAAGAAGATGGTGAAAAGTGGTCAAGTGCCAGATGCCAGGTCTTATGAGAAGCTTAGGGCAATTTTGGATGTTAAACTTGCAAAAAAGAACAAGAAGGACAAGAGTGCTATACTGGGTATAATTAATAGCAAGATGGGTATGTTGAAAATTAAGAAGAAAGGAAAGAAAGATGAGTTCTGGAAGAACAAGAAGAAGCGTTATGTGAGAGCTGATAATGCAGTTAACAATACCAACAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

715

Amino Acids

80.79

Weight (kDa)

7.53

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	258 - 303	5e-11	PPR repeat family
PPR_long	PF17177	271 - 409	1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	356 - 412	6.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	360 - 393	1.8e-08	PPR repeat
PPR_2	PF13041	365 - 412	6.1e-16	PPR repeat family
PPR	PF01535	368 - 397	7.9e-08	PPR repeat
PPR_long	PF17177	388 - 492	5.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	403 - 446	9.3e-09	PPR repeat family
PPR_3	PF13812	422 - 482	3.3e-10	Pentatricopeptide repeat domain
PPR_long	PF17177	424 - 550	4.2e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	437 - 482	3.4e-08	PPR repeat family
PPR_2	PF13041	474 - 517	8.2e-10	PPR repeat family
PPR_3	PF13812	495 - 550	3e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	507 - 554	2e-07	PPR repeat family
PPR_2	PF13041	543 - 589	3.4e-10	PPR repeat family
PPR_3	PF13812	543 - 587	3.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	575 - 622	5.9e-12	PPR repeat family
PPR_2	PF13041	610 - 650	3.3e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50280
fragaria_vesca	FvH4_5g07010 FvH4_5g07010
malus_domestica	MD06G1160200.v1.1
prunus_persica	Prupe.5G160200_v2.0.a1
pyrus_communis	pycom06g14320
rosa_chinensis	RchiOBHm_Chr2g0103631 RchiOBHm_Chr7g0191671
rosa_laevigata	RLG00000004435 RLG00000016595 RLG00000030786
rosa_multiflora	Rmu_co8329853.1_g000001 Rmu_co8381307.1_g000001 Rmu_sc0001123.1_g000010 Rmu_sc0001530.1_g000019 Rmu_sc0001852.1_g000012 Rmu_sc0018746.1_g000006
rosa_roxburghii	Rroxscaffold_157G00438490 Rroxscaffold_3G00263660
rosa_rugosa	Rorug02G0116400 Rorug06G0510800
rosa_samantha	Rh2AG102000 Rh2BG023000 Rh2DG103300 Rh2DG170000 Rh3CG338800 Rh6BG097500 Rh7AG119800 Rh7AG120000 Rh7BG122100 Rh7BG214500 Rh7CG124700 Rh7DG122900
rosa_wichuraiana	Rw7G010220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	789, 1013
AccI	GTMKAC	2 cut(s)	405, 1424
AccII	CGCG	1 cut(s)	1872
AccIII	TCCGGA	1 cut(s)	877
AciI	CCGC	6 cut(s)	38, 795, 916, 1122, 1559, 1870
AclWI	GGATC	4 cut(s)	888, 1091, 1292, 1305
AcsI	RAATTY	3 cut(s)	520, 1584, 1700
AcuI	CTGAAG	2 cut(s)	1058, 1176
AcvI	CACGTG	1 cut(s)	1766
AcyI	GRCGYC	1 cut(s)	402
AfaI	GTAC	1 cut(s)	423
AfiI	CCNNNNNNNGG	3 cut(s)	398, 415, 707
AflIII	ACRYGT	2 cut(s)	890, 1319
AjiI	CACGTC	1 cut(s)	891
AjnI	CCWGG	1 cut(s)	1940
AjuI	GAANNNNNNNTTGG	4 cut(s)	142, 174, 546, 578
Alw21I	GWGCWC	2 cut(s)	818, 1009
Alw26I	GTCTC	4 cut(s)	109, 294, 720, 845
Alw44I	GTGCAC	1 cut(s)	1005
AlwI	GGATC	4 cut(s)	888, 1091, 1292, 1305
AlwNI	CAGNNNCTG	1 cut(s)	1458
Aor13HI	TCCGGA	1 cut(s)	877
AoxI	GGCC	2 cut(s)	805, 1159
ApaLI	GTGCAC	1 cut(s)	1005
ApeKI	GCWGC	3 cut(s)	1246, 1367, 1720
ApoI	RAATTY	3 cut(s)	520, 1584, 1700
AseI	ATTAAT	1 cut(s)	2028
AspS9I	GGNCC	3 cut(s)	205, 256, 440
AsuC2I	CCSGG	2 cut(s)	759, 1142
AsuHPI	GGTGA	5 cut(s)	457, 614, 1574, 1639, 1927
AvaII	GGWCC	3 cut(s)	205, 256, 440
BaeGI	GKGCMC	1 cut(s)	1009
BamHI	GGATCC	1 cut(s)	1297
BanII	GRGCYC	1 cut(s)	102
BbrPI	CACGTG	1 cut(s)	1766
Bbv12I	GWGCWC	2 cut(s)	818, 1009
BbvI	GCAGC	3 cut(s)	1258, 1354, 1732
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	326, 360
BciT130I	CCWGG	1 cut(s)	1942
BclI	TGATCA	1 cut(s)	1599
BcnI	CCSGG	2 cut(s)	759, 1142
BcoDI	GTCTC	4 cut(s)	109, 294, 720, 845
BfaI	CTAG	2 cut(s)	504, 678
BfmI	CTRYAG	2 cut(s)	335, 1368
BisI	GCNGC	4 cut(s)	795, 1247, 1368, 1721
BlsI	GCNGC	4 cut(s)	796, 1248, 1369, 1722
Bme1390I	CCNGG	3 cut(s)	759, 1142, 1942
Bme18I	GGWCC	3 cut(s)	205, 256, 440
BmgBI	CACGTC	1 cut(s)	891
BmgT120I	GGNCC	3 cut(s)	205, 256, 440
BmiI	GGNNCC	4 cut(s)	258, 441, 660, 1299
BmrFI	CCNGG	3 cut(s)	759, 1142, 1942
BmrI	ACTGGG	4 cut(s)	404, 446, 539, 2027
BmsI	GCATC	5 cut(s)	823, 1216, 1363, 1534, 1927
BmuI	ACTGGG	4 cut(s)	404, 446, 539, 2027
Bpu10I	CCTNAGC	1 cut(s)	1958
BpuEI	CTTGAG	1 cut(s)	1870
BpuMI	CCSGG	2 cut(s)	759, 1142
BsaAI	YACGTR	2 cut(s)	1422, 1766
BsaHI	GRCGYC	1 cut(s)	402
BsaJI	CCNNGG	1 cut(s)	70
BsaWI	WCCGGW	2 cut(s)	442, 877
BsaXI	ACNNNNNCTCC	6 cut(s)	560, 590, 599, 629, 1277, 1307
Bsc4I	CCNNNNNNNGG	3 cut(s)	398, 415, 707
Bse1I	ACTGG	5 cut(s)	410, 441, 534, 1545, 2022
BseAI	TCCGGA	1 cut(s)	877
BseBI	CCWGG	1 cut(s)	1942
BseDI	CCNNGG	1 cut(s)	70
BseGI	GGATG	9 cut(s)	164, 651, 781, 1231, 1392, 1549, 1693, 1866, 1978
BseLI	CCNNNNNNNGG	3 cut(s)	398, 415, 707
BseMII	CTCAG	6 cut(s)	104, 147, 1161, 1242, 1373, 1560
BseNI	ACTGG	5 cut(s)	410, 441, 534, 1545, 2022
BseRI	GAGGAG	5 cut(s)	18, 21, 129, 551, 620
BseSI	GKGCMC	1 cut(s)	1009
BseXI	GCAGC	3 cut(s)	1258, 1354, 1732
Bsh1236I	CGCG	1 cut(s)	1872
BshFI	GGCC	2 cut(s)	807, 1161
BsiHKAI	GWGCWC	2 cut(s)	818, 1009
BsiSI	CCGG	6 cut(s)	399, 416, 443, 758, 878, 1141
BslFI	GGGAC	3 cut(s)	962, 1392, 1633
BslI	CCNNNNNNNGG	3 cut(s)	398, 415, 707
BsmAI	GTCTC	4 cut(s)	109, 294, 720, 845
BsmBI	CGTCTC	1 cut(s)	845
BsmFI	GGGAC	3 cut(s)	962, 1392, 1633
BsmI	GAATGC	2 cut(s)	1248, 1759
BsnI	GGCC	2 cut(s)	807, 1161
Bsp1286I	GDGCHC	3 cut(s)	102, 818, 1009
Bsp13I	TCCGGA	1 cut(s)	877
Bsp143I	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
Bsp19I	CCATGG	1 cut(s)	70
BspACI	CCGC	6 cut(s)	38, 795, 916, 1122, 1559, 1870
BspANI	GGCC	2 cut(s)	807, 1161
BspCNI	CTCAG	6 cut(s)	105, 146, 1162, 1243, 1374, 1561
BspEI	TCCGGA	1 cut(s)	877
BspFNI	CGCG	1 cut(s)	1872
BspLI	GGNNCC	4 cut(s)	258, 441, 660, 1299
BspMAI	CTGCAG	2 cut(s)	339, 1372
BspPI	GGATC	4 cut(s)	888, 1091, 1292, 1305
BspQI	GCTCTTC	1 cut(s)	358
BsrI	ACTGG	5 cut(s)	410, 441, 534, 1545, 2022
BssECI	CCNNGG	1 cut(s)	70
BssMI	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
BssNAI	GTATAC	1 cut(s)	1425
BssNI	GRCGYC	1 cut(s)	402
BssT1I	CCWWGG	1 cut(s)	70
Bst1107I	GTATAC	1 cut(s)	1425
Bst2UI	CCWGG	1 cut(s)	1942
Bst4CI	ACNGT	3 cut(s)	56, 1235, 1729
Bst6I	CTCTTC	8 cut(s)	67, 125, 195, 213, 246, 358, 1034, 1647
BstACI	GRCGYC	1 cut(s)	402
BstAPI	GCANNNNNTGC	1 cut(s)	493
BstBAI	YACGTR	2 cut(s)	1422, 1766
BstC8I	GCNNGC	4 cut(s)	326, 1460, 1557, 1874
BstDSI	CCRYGG	1 cut(s)	70
BstF5I	GGATG	9 cut(s)	164, 651, 781, 1231, 1392, 1549, 1693, 1866, 1978
BstFNI	CGCG	1 cut(s)	1872
BstKTI	GATC	5 cut(s)	883, 1086, 1300, 1602, 1857
BstMAI	GTCTC	4 cut(s)	109, 294, 720, 845
BstMBI	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
BstMWI	GCNNNNNNNGC	6 cut(s)	334, 493, 813, 1373, 1478, 2120
BstNI	CCWGG	1 cut(s)	1942
BstNSI	RCATGY	1 cut(s)	1323
BstSCI	CCNGG	3 cut(s)	757, 1140, 1940
BstSFI	CTRYAG	2 cut(s)	335, 1368
BstSLI	GKGCMC	1 cut(s)	1009
BstSNI	TACGTA	1 cut(s)	1422
BstUI	CGCG	1 cut(s)	1872
BstV1I	GCAGC	3 cut(s)	1258, 1354, 1732
BstX2I	RGATCY	2 cut(s)	1083, 1297
BstYI	RGATCY	2 cut(s)	1083, 1297
BstZ17I	GTATAC	1 cut(s)	1425
BsuRI	GGCC	2 cut(s)	807, 1161
BtgI	CCRYGG	1 cut(s)	70
BtgZI	GCGATG	1 cut(s)	1462
BtrI	CACGTC	1 cut(s)	891
BtsCI	GGATG	9 cut(s)	164, 651, 781, 1231, 1392, 1549, 1693, 1866, 1978
BtsI	GCAGTG	1 cut(s)	937
BtsIMutI	CAGTG	6 cut(s)	417, 527, 937, 1459, 1566, 1734
Cac8I	GCNNGC	4 cut(s)	326, 1460, 1557, 1874
CaiI	CAGNNNCTG	1 cut(s)	1458
Cfr13I	GGNCC	3 cut(s)	205, 256, 440
CseI	GACGC	1 cut(s)	391
Csp6I	GTAC	1 cut(s)	422
CspCI	CAANNNNNGTGG	4 cut(s)	1671, 1706, 1779, 1814
CviQI	GTAC	1 cut(s)	422
DpnI	GATC	5 cut(s)	882, 1085, 1299, 1601, 1856
DpnII	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
Eam1104I	CTCTTC	8 cut(s)	67, 125, 195, 213, 246, 358, 1034, 1647
EarI	CTCTTC	8 cut(s)	67, 125, 195, 213, 246, 358, 1034, 1647
Eco105I	TACGTA	1 cut(s)	1422
Eco130I	CCWWGG	1 cut(s)	70
Eco147I	AGGCCT	1 cut(s)	1161
Eco24I	GRGCYC	1 cut(s)	102
Eco47I	GGWCC	3 cut(s)	205, 256, 440
Eco57I	CTGAAG	2 cut(s)	1058, 1176
Eco72I	CACGTG	1 cut(s)	1766
EcoO109I	RGGNCCY	1 cut(s)	256
EcoRII	CCWGG	1 cut(s)	1940
EcoT14I	CCWWGG	1 cut(s)	70
EcoT22I	ATGCAT	5 cut(s)	1231, 1378, 1444, 1549, 1759
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	1 cut(s)	70
Esp3I	CGTCTC	1 cut(s)	845
FaqI	GGGAC	3 cut(s)	962, 1392, 1633
FauI	CCCGC	2 cut(s)	45, 1552
FauNDI	CATATG	1 cut(s)	1759
FbaI	TGATCA	1 cut(s)	1599
FblI	GTMKAC	2 cut(s)	405, 1424
Fnu4HI	GCNGC	4 cut(s)	795, 1247, 1368, 1721
FokI	GGATG	9 cut(s)	151, 658, 788, 1238, 1399, 1556, 1700, 1853, 1985
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	4 cut(s)	795, 1247, 1368, 1721
FspBI	CTAG	2 cut(s)	504, 678
GluI	GCNGC	4 cut(s)	795, 1247, 1368, 1721
HaeIII	GGCC	2 cut(s)	807, 1161
HapII	CCGG	6 cut(s)	399, 416, 443, 758, 878, 1141
HgaI	GACGC	1 cut(s)	391
Hin1I	GRCGYC	1 cut(s)	402
HincII	GTYRAC	2 cut(s)	406, 2128
HindII	GTYRAC	2 cut(s)	406, 2128
HindIII	AAGCTT	3 cut(s)	1265, 1470, 1955
HpaI	GTTAAC	1 cut(s)	2128
HpaII	CCGG	6 cut(s)	399, 416, 443, 758, 878, 1141
HphI	GGTGA	5 cut(s)	457, 614, 1574, 1639, 1927
Hpy166II	GTNNAC	5 cut(s)	406, 1007, 1167, 1425, 2128
Hpy188I	TCNGA	7 cut(s)	294, 388, 454, 1062, 1221, 1383, 1699
Hpy188III	TCNNGA	7 cut(s)	188, 878, 992, 1646, 1676, 1887, 2083
Hpy8I	GTNNAC	5 cut(s)	406, 1007, 1167, 1425, 2128
Hpy99I	CGWCG	2 cut(s)	351, 407
HpyCH4III	ACNGT	3 cut(s)	56, 1235, 1729
HpyCH4IV	ACGT	3 cut(s)	890, 1421, 1765
HpyF10VI	GCNNNNNNNGC	6 cut(s)	334, 493, 813, 1373, 1478, 2120
HpySE526I	ACGT	3 cut(s)	890, 1421, 1765
Hsp92I	GRCGYC	1 cut(s)	402
Kpn2I	TCCGGA	1 cut(s)	877
Ksp22I	TGATCA	1 cut(s)	1599
KspAI	GTTAAC	1 cut(s)	2128
Kzo9I	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
LguI	GCTCTTC	1 cut(s)	358
LmnI	GCTCC	3 cut(s)	27, 142, 658
Lsp1109I	GCAGC	3 cut(s)	1258, 1354, 1732
LweI	GCATC	5 cut(s)	823, 1216, 1363, 1534, 1927
MaeI	CTAG	2 cut(s)	504, 678
MaeII	ACGT	3 cut(s)	890, 1421, 1765
MaeIII	GTNAC	8 cut(s)	56, 670, 886, 1358, 1562, 1627, 1667, 1837
MalI	GATC	5 cut(s)	882, 1085, 1299, 1601, 1856
MboI	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
MflI	RGATCY	2 cut(s)	1083, 1297
MhlI	GDGCHC	3 cut(s)	102, 818, 1009
MlyI	GAGTC	3 cut(s)	111, 239, 997
MmeI	TCCRAC	3 cut(s)	173, 1161, 1275
Mph1103I	ATGCAT	5 cut(s)	1231, 1378, 1444, 1549, 1759
MroI	TCCGGA	1 cut(s)	877
MslI	CAYNNNNRTG	2 cut(s)	1571, 1871
MspA1I	CMGCKG	1 cut(s)	1795
MspI	CCGG	6 cut(s)	399, 416, 443, 758, 878, 1141
MspR9I	CCNGG	3 cut(s)	759, 1142, 1942
Mva1269I	GAATGC	2 cut(s)	1248, 1759
MvaI	CCWGG	1 cut(s)	1942
MvnI	CGCG	1 cut(s)	1872
MwoI	GCNNNNNNNGC	6 cut(s)	334, 493, 813, 1373, 1478, 2120
NciI	CCSGG	2 cut(s)	759, 1142
NcoI	CCATGG	1 cut(s)	70
NdeI	CATATG	1 cut(s)	1759
NdeII	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
NlaIV	GGNNCC	4 cut(s)	258, 441, 660, 1299
NmuCI	GTSAC	7 cut(s)	56, 886, 1358, 1562, 1627, 1667, 1837
NsiI	ATGCAT	5 cut(s)	1231, 1378, 1444, 1549, 1759
NspI	RCATGY	1 cut(s)	1323
PceI	AGGCCT	1 cut(s)	1161
PciI	ACATGT	1 cut(s)	1319
PciSI	GCTCTTC	1 cut(s)	358
PcsI	WCGNNNNNNNCGW	1 cut(s)	378
PctI	GAATGC	2 cut(s)	1248, 1759
PfeI	GAWTC	8 cut(s)	279, 343, 383, 395, 455, 941, 1133, 1832
PkrI	GCNGC	4 cut(s)	796, 1248, 1369, 1722
PleI	GAGTC	3 cut(s)	111, 238, 996
PmaCI	CACGTG	1 cut(s)	1766
PmlI	CACGTG	1 cut(s)	1766
PpsI	GAGTC	3 cut(s)	111, 238, 996
Ppu21I	YACGTR	2 cut(s)	1422, 1766
PpuMI	RGGWCCY	1 cut(s)	256
PscI	ACATGT	1 cut(s)	1319
PshBI	ATTAAT	1 cut(s)	2028
PsiI	TTATAA	2 cut(s)	789, 1013
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	1 cut(s)	1940
PspCI	CACGTG	1 cut(s)	1766
PspGI	CCWGG	1 cut(s)	1940
PspN4I	GGNNCC	4 cut(s)	258, 441, 660, 1299
PspPI	GGNCC	3 cut(s)	205, 256, 440
PspPPI	RGGWCCY	1 cut(s)	256
PstI	CTGCAG	2 cut(s)	339, 1372
PstNI	CAGNNNCTG	1 cut(s)	1458
PsuI	RGATCY	2 cut(s)	1083, 1297
PvuII	CAGCTG	1 cut(s)	1795
RsaI	GTAC	1 cut(s)	423
RsaNI	GTAC	1 cut(s)	422
RseI	CAYNNNNRTG	2 cut(s)	1571, 1871
SalI	GTCGAC	1 cut(s)	404
SapI	GCTCTTC	1 cut(s)	358
SatI	GCNGC	4 cut(s)	795, 1247, 1368, 1721
Sau3AI	GATC	5 cut(s)	880, 1083, 1297, 1599, 1854
Sau96I	GGNCC	3 cut(s)	205, 256, 440
SchI	GAGTC	3 cut(s)	111, 239, 997
ScrFI	CCNGG	3 cut(s)	759, 1142, 1942
SduI	GDGCHC	3 cut(s)	102, 818, 1009
SfaNI	GCATC	5 cut(s)	823, 1216, 1363, 1534, 1927
SfcI	CTRYAG	2 cut(s)	335, 1368
SinI	GGWCC	3 cut(s)	205, 256, 440
SmiMI	CAYNNNNRTG	2 cut(s)	1571, 1871
SmlI	CTYRAG	1 cut(s)	1885
SmoI	CTYRAG	1 cut(s)	1885
SnaBI	TACGTA	1 cut(s)	1422
SseBI	AGGCCT	1 cut(s)	1161
SsiI	CCGC	6 cut(s)	38, 795, 916, 1122, 1559, 1870
SspI	AATATT	1 cut(s)	1216
SspMI	CTAG	2 cut(s)	504, 678
StuI	AGGCCT	1 cut(s)	1161
StyD4I	CCNGG	3 cut(s)	757, 1140, 1940
StyI	CCWWGG	1 cut(s)	70
TaaI	ACNGT	3 cut(s)	56, 1235, 1729
TaiI	ACGT	3 cut(s)	893, 1424, 1768
TaqI	TCGA	4 cut(s)	189, 405, 818, 896
TatI	WGTACW	1 cut(s)	421
TauI	GCSGC	1 cut(s)	797
TfiI	GAWTC	8 cut(s)	279, 343, 383, 395, 455, 941, 1133, 1832
TscAI	CASTG	6 cut(s)	417, 534, 937, 1459, 1573, 1734
TseFI	GTSAC	7 cut(s)	56, 886, 1358, 1562, 1627, 1667, 1837
TseI	GCWGC	3 cut(s)	1246, 1367, 1720
Tsp45I	GTSAC	7 cut(s)	56, 886, 1358, 1562, 1627, 1667, 1837
TspDTI	ATGAA	9 cut(s)	225, 258, 770, 933, 980, 1190, 1403, 1508, 1766
TspRI	CASTG	6 cut(s)	417, 534, 937, 1459, 1573, 1734
VneI	GTGCAC	1 cut(s)	1005
VpaK11BI	GGWCC	3 cut(s)	205, 256, 440
VspI	ATTAAT	1 cut(s)	2028
XapI	RAATTY	3 cut(s)	520, 1584, 1700
XceI	RCATGY	1 cut(s)	1323
XmiI	GTMKAC	2 cut(s)	405, 1424
XspI	CTAG	2 cut(s)	504, 678
Zsp2I	ATGCAT	5 cut(s)	1231, 1378, 1444, 1549, 1759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.