Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G50280 |
| fragaria_vesca | FvH4_5g07010 FvH4_5g07010 |
| malus_domestica | MD06G1160200.v1.1 |
| prunus_persica | Prupe.5G160200_v2.0.a1 |
| pyrus_communis | pycom06g14320 |
| rosa_chinensis | RchiOBHm_Chr2g0103631 RchiOBHm_Chr7g0191671 |
| rosa_laevigata | RLG00000004435 RLG00000016595 RLG00000030786 |
| rosa_multiflora | Rmu_co8329853.1_g000001 Rmu_co8381307.1_g000001 Rmu_sc0001123.1_g000010 Rmu_sc0001530.1_g000019 Rmu_sc0001852.1_g000012 Rmu_sc0018746.1_g000006 |
| rosa_roxburghii | Rroxscaffold_157G00438490 Rroxscaffold_3G00263660 |
| rosa_rugosa | Rorug02G0116400 Rorug06G0510800 |
| rosa_samantha | Rh2AG102000 Rh2BG023000 Rh2DG103300 Rh2DG170000 Rh3CG338800 Rh6BG097500 Rh7AG119800 Rh7AG120000 Rh7BG122100 Rh7BG214500 Rh7CG124700 Rh7DG122900 |
| rosa_wichuraiana | Rw7G010220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 227 |
| AclWI | GGATC | 1 cut(s) | 305 |
| AcsI | RAATTY | 1 cut(s) | 134 |
| AcuI | CTGAAG | 1 cut(s) | 272 |
| AcyI | GRCGYC | 1 cut(s) | 17 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 36 |
| AgsI | TTSAA | 3 cut(s) | 173, 275, 281 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 21 |
| AluBI | AGCT | 1 cut(s) | 250 |
| AluI | AGCT | 1 cut(s) | 250 |
| Alw21I | GWGCWC | 1 cut(s) | 223 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| AlwI | GGATC | 1 cut(s) | 305 |
| ApoI | RAATTY | 1 cut(s) | 134 |
| Bbv12I | GWGCWC | 1 cut(s) | 223 |
| BccI | CCATC | 1 cut(s) | 64 |
| BclI | TGATCA | 1 cut(s) | 94 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 21 |
| BmsI | GCATC | 2 cut(s) | 37, 145 |
| BsaBI | GATNNNNATC | 1 cut(s) | 122 |
| BsaHI | GRCGYC | 1 cut(s) | 17 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 36 |
| Bse8I | GATNNNNATC | 1 cut(s) | 122 |
| BseJI | GATNNNNATC | 1 cut(s) | 122 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseRI | GAGGAG | 1 cut(s) | 260 |
| BsiHKAI | GWGCWC | 1 cut(s) | 223 |
| BslFI | GGGAC | 1 cut(s) | 176 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmBI | CGTCTC | 1 cut(s) | 59 |
| BsmFI | GGGAC | 1 cut(s) | 176 |
| Bsp1286I | GDGCHC | 1 cut(s) | 223 |
| Bsp143I | GATC | 2 cut(s) | 94, 297 |
| BspHI | TCATGA | 1 cut(s) | 126 |
| BspPI | GGATC | 1 cut(s) | 305 |
| BssMI | GATC | 2 cut(s) | 94, 297 |
| BssNI | GRCGYC | 1 cut(s) | 17 |
| Bst6I | CTCTTC | 1 cut(s) | 248 |
| BstACI | GRCGYC | 1 cut(s) | 17 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 155 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 34 |
| BstKTI | GATC | 2 cut(s) | 97, 300 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstMBI | GATC | 2 cut(s) | 94, 297 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstX2I | RGATCY | 1 cut(s) | 297 |
| BstYI | RGATCY | 1 cut(s) | 297 |
| BtsI | GCAGTG | 1 cut(s) | 151 |
| BtsIMutI | CAGTG | 1 cut(s) | 151 |
| CciI | TCATGA | 1 cut(s) | 126 |
| CseI | GACGC | 1 cut(s) | 25 |
| CviAII | CATG | 3 cut(s) | 98, 127, 159 |
| CviJI | RGCY | 2 cut(s) | 250, 263 |
| CviKI_1 | RGCY | 2 cut(s) | 250, 263 |
| DpnI | GATC | 2 cut(s) | 96, 299 |
| DpnII | GATC | 2 cut(s) | 94, 297 |
| DriI | GACNNNNNGTC | 1 cut(s) | 21 |
| Eam1104I | CTCTTC | 1 cut(s) | 248 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 248 |
| Eco57I | CTGAAG | 1 cut(s) | 272 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 34 |
| EcoT22I | ATGCAT | 1 cut(s) | 160 |
| Esp3I | CGTCTC | 1 cut(s) | 59 |
| FaeI | CATG | 3 cut(s) | 101, 130, 162 |
| FaiI | YATR | 7 cut(s) | 42, 61, 63, 99, 128, 160, 227 |
| FaqI | GGGAC | 1 cut(s) | 176 |
| FatI | CATG | 3 cut(s) | 97, 126, 158 |
| FbaI | TGATCA | 1 cut(s) | 94 |
| HgaI | GACGC | 1 cut(s) | 25 |
| Hin1I | GRCGYC | 1 cut(s) | 17 |
| Hin1II | CATG | 3 cut(s) | 101, 130, 162 |
| HinfI | GANTC | 1 cut(s) | 202 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 127, 206, 306 |
| Hpy99I | CGWCG | 1 cut(s) | 19 |
| HpyAV | CCTTC | 2 cut(s) | 49, 98 |
| HpyCH4V | TGCA | 2 cut(s) | 149, 158 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| Hsp92I | GRCGYC | 1 cut(s) | 17 |
| Hsp92II | CATG | 3 cut(s) | 101, 130, 162 |
| Ksp22I | TGATCA | 1 cut(s) | 94 |
| Kzo9I | GATC | 2 cut(s) | 94, 297 |
| LmnI | GCTCC | 1 cut(s) | 247 |
| LpnPI | CCDG | 4 cut(s) | 22, 105, 169, 191 |
| LweI | GCATC | 2 cut(s) | 37, 145 |
| MaeIII | GTNAC | 1 cut(s) | 23 |
| MalI | GATC | 2 cut(s) | 96, 299 |
| MboI | GATC | 2 cut(s) | 94, 297 |
| MboII | GAAGA | 2 cut(s) | 265, 301 |
| MflI | RGATCY | 1 cut(s) | 297 |
| MhlI | GDGCHC | 1 cut(s) | 223 |
| MluCI | AATT | 2 cut(s) | 134, 276 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 4 cut(s) | 22, 30, 123, 238 |
| Mph1103I | ATGCAT | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NdeII | GATC | 2 cut(s) | 94, 297 |
| NlaIII | CATG | 3 cut(s) | 101, 130, 162 |
| NmuCI | GTSAC | 1 cut(s) | 23 |
| NsiI | ATGCAT | 1 cut(s) | 160 |
| PagI | TCATGA | 1 cut(s) | 126 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| PsiI | TTATAA | 1 cut(s) | 227 |
| PsuI | RGATCY | 1 cut(s) | 297 |
| Sau3AI | GATC | 2 cut(s) | 94, 297 |
| SchI | GAGTC | 1 cut(s) | 211 |
| SduI | GDGCHC | 1 cut(s) | 223 |
| SetI | ASST | 4 cut(s) | 41, 60, 193, 252 |
| SfaNI | GCATC | 2 cut(s) | 37, 145 |
| Sse9I | AATT | 2 cut(s) | 134, 276 |
| TaqI | TCGA | 3 cut(s) | 14, 110, 305 |
| TasI | AATT | 2 cut(s) | 134, 276 |
| TscAI | CASTG | 1 cut(s) | 151 |
| TseFI | GTSAC | 1 cut(s) | 23 |
| Tsp45I | GTSAC | 1 cut(s) | 23 |
| TspRI | CASTG | 1 cut(s) | 151 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 34 |
| XapI | RAATTY | 1 cut(s) | 134 |
| Zsp2I | ATGCAT | 1 cut(s) | 160 |