Rh7CG124700

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0003877
Physical Location & Seq
Reverse (-)
9659648 .. 9663185
3538 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG124700.1

Sequence Viewer

Length: 2130 bp
ATGGCTCTTCTACGCCAACAGCTCCGTCCTCCTCTCCCGCTTCCCTTAATTCACAGTCACTCTTCAACCCACCATTTCCCAAAGCCCTGCCTCTTTGTGCTCTCCAAAACCCTAAGACGTTTCTCTCTCTACTCAGCTCCTCCTACTCCCACTTCCAGCTCCTCAGCCTCCATTTTCCTTCCATTTCTCCAAGACGAAGAAGAAGCAGAAGAAGAAGAAGATGAAGCAGAAGAAGAGGACCCAGATGACCCAATTGTCAGATTCTTCAAGTCTCGGACTTCAACCCAAGACCCACAACGAGAAGGCAAGCTCTCTCTGCAGAAGAACCGCCGCTCTTCTTGGCACTTGGCTGACGATTTAGACGATTCCGCAAGCGATTCCGGCGTCGACCCAGTGCTGGAAGCACAAAAACAACAACTGGGTCCGGTGGATTCCGATTCTAATCCATTATCAGATGGAATTGTTGGACAGATTTTGCAGAAAGCTAGGAACTTGCCGCAGAATATGACACTGGGAGAGGAATTGGGAGGTTTTGAAGGGAAGGTTGGGGAGAAGGAGTGTGTGGAGGTTTTGGAGTTGATGGGTGAGGAAGGATTGCTATTGGGTTGCTTGTATTTCTTTGAGTGGATGGGTTTGCAGGAGCCTTCTCTGGTTACTCCCAGGGCTTGTTCAGTTTTGTTTCCTATTTTGGGGAGAGCTGGAATGGGAGAAAAGCTGGTGGTTCTGTTTAACAACTTACCAGCCAAGAAGGAGTTCAGGGATGTTCATGTTTATAATGCTGCAATTTCTGGCCTCATGTGCTCTAAAAGGTATGAAGATGCTTGGAAGGTATATGAGACGATGGAAGCAAATAATACCCTTCCGGATCATGTGACGTGTTCGATAATGATTACTATCATGAGGAAAATTGGTCGCAGTGCAAAAGATGCATGGGACTTCTTTGAAAAAATGAACAGGAAAGGTGTCAATTGGAGTCAGGAAGTTTTGGGTGCTCTTATAAAATCGTTCTGTGATGAGGGGCTGAAGAGCGAAGCCCTTATCATTCAAATTGAAATGGAGAAGAAAGGGATCTCATCAAACGCCATTGTGTACAATACTTTAATGAACGCGTTTTGTAATTCTAACCAAGTTGAAGAAGCTGAAGGTCTTTTTGCTGAGATGAAATCAAAGGGGATTAAACCCACATCTCCCACCTTTAATATTCTGATGGATGCATACAGTAGAAGAATGCAGCCTGAGATTGTTGAGAAGCTTTTGGTAGAAATGCAGGATATGGGATTGGAGCCAAATGTCAAATCCTATACATGTCTTGTTAGTGCGTATGGGAGGCAGAAGAATATGAGTGACATGGCTGCAGATGCATTTCTGAGGATGAAGAAAGTTGGTATTAGTCCCACTTCACATTCGTATACAGCTCTTATCCATGCATATTCAGTCGGTGGCTGGCATGAGAAAGCTTACATTGCATTTGAGAACATGCAAAGGGAAGGATTAAAACCCTCCATAGAAACATATACTGCTTTGCTGGATGCATTTAGGCGTGCTGGCGACACTGAGATGTTGATGAGAATTTGGAAATTGATGATCAAAGAGAAGGTTCAAGGGACTAAGGTGACATTCAACACTCTTCTTGATGGATTTGCCAAGCAAGGTCATTATCTTGAAGCAAGAGATGTGGTTTCTGAATTTGGCAATATCGGTTTGCAGCCAACAGTGATGACATATAATATGCTGATGAATGCATATGCACGTGGAGGGCAACACTCAAAGTTGCCACAGCTATTGAAAGAGATGGAAGTTCTCAATTTGAAACCTGACTCTGTAACTTACTCAACTATGATCTATGCCTACATCCGCGTGCGTGATTTCTCAAGAGCATTTTTCTATCACAAGAAGATGGTAAAAAGTGGTCAAGTGCCAGATGCGAGGTCTTATGAGAAGCTTAGGGCAATTTTGGATGTAAAACTCGCGAGAAAGAACAAGAAGGATAAGAGTGCTATTCTGGGTATAATTAATAGCAAGATGGGTATGTTGAAAATTAAGAAGAAGGGAAAGAAAGATGAGTTCTGGAAGAACAAGAAGAAGCGTTATGTGAGAGCAGATAATGCAGTTAACAATACCAACAACTAA

Protein Analysis

709

Amino Acids

80.23

Weight (kDa)

8.3

Isoelectric Point (pI)

43.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 253 - 298 1.6e-10 PPR repeat family
PPR_long PF17177 267 - 404 3.8e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 314 - 373 9.8e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 331 - 373 4.7e-07 PPR repeat family
PPR_3 PF13812 351 - 407 1.8e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 355 - 388 1.3e-08 PPR repeat
PPR_2 PF13041 360 - 407 9.8e-17 PPR repeat family
PPR PF01535 363 - 392 8.9e-09 PPR repeat
PPR_long PF17177 384 - 510 8.6e-10 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 398 - 441 4.1e-09 PPR repeat family
PPR_3 PF13812 417 - 477 3.7e-11 Pentatricopeptide repeat domain
PPR_long PF17177 419 - 538 2.1e-08 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 429 - 477 2.9e-09 PPR repeat family
PPR_2 PF13041 469 - 512 2.5e-08 PPR repeat family
PPR_3 PF13812 490 - 545 2.4e-12 Pentatricopeptide repeat domain
PPR_2 PF13041 500 - 549 2e-08 PPR repeat family
PPR_2 PF13041 538 - 584 3.3e-09 PPR repeat family
PPR_3 PF13812 538 - 582 1.8e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 570 - 617 5.8e-12 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 774, 998
AasI GACNNNNNNGTC 1 cut(s) 254
AccBSI CCGCTC 1 cut(s) 333
AccI GTMKAC 2 cut(s) 387, 1409
AccII CGCG 3 cut(s) 1109, 1857, 1970
AccIII TCCGGA 1 cut(s) 862
AciI CCGC 6 cut(s) 38, 328, 331, 369, 497, 1855
AclWI GGATC 2 cut(s) 873, 1076
AcsI RAATTY 2 cut(s) 1569, 1685
AcuI CTGAAG 2 cut(s) 1043, 1161
AcvI CACGTG 1 cut(s) 1751
AcyI GRCGYC 1 cut(s) 384
AfaI GTAC 1 cut(s) 1091
AfiI CCNNNNNNNGG 2 cut(s) 397, 689
AflIII ACRYGT 3 cut(s) 875, 1107, 1304
AjiI CACGTC 1 cut(s) 876
AjnI CCWGG 1 cut(s) 659
AjuI GAANNNNNNNTTGG 4 cut(s) 528, 560, 737, 769
Alw21I GWGCWC 3 cut(s) 102, 803, 994
Alw26I GTCTC 2 cut(s) 276, 830
AlwI GGATC 2 cut(s) 873, 1076
Aor13HI TCCGGA 1 cut(s) 862
AoxI GGCC 1 cut(s) 790
ApeKI GCWGC 4 cut(s) 779, 1231, 1352, 1705
ApoI RAATTY 2 cut(s) 1569, 1685
AseI ATTAAT 1 cut(s) 2013
Asp700I GAANNNNTTC 1 cut(s) 752
AspS9I GGNCC 2 cut(s) 238, 422
AsuHPI GGTGA 2 cut(s) 596, 1624
AvaII GGWCC 2 cut(s) 238, 422
BbrPI CACGTG 1 cut(s) 1751
Bbv12I GWGCWC 3 cut(s) 102, 803, 994
BbvCI CCTCAGC 1 cut(s) 163
BbvI GCAGC 4 cut(s) 766, 1243, 1339, 1717
BccI CCATC 9 cut(s) 449, 574, 622, 835, 1201, 1628, 1786, 1891, 2017
BciT130I CCWGG 1 cut(s) 661
BclI TGATCA 1 cut(s) 1584
BcoDI GTCTC 2 cut(s) 276, 830
BfaI CTAG 1 cut(s) 486
BfmI CTRYAG 2 cut(s) 317, 1353
BisI GCNGC 6 cut(s) 331, 497, 780, 1232, 1353, 1706
BlsI GCNGC 6 cut(s) 332, 498, 781, 1233, 1354, 1707
Bme1390I CCNGG 1 cut(s) 661
Bme18I GGWCC 2 cut(s) 238, 422
BmgBI CACGTC 1 cut(s) 876
BmgT120I GGNCC 2 cut(s) 238, 422
BmiI GGNNCC 4 cut(s) 240, 423, 642, 1284
BmrFI CCNGG 1 cut(s) 661
BmrI ACTGGG 3 cut(s) 386, 428, 521
BmsI GCATC 6 cut(s) 808, 916, 1201, 1348, 1519, 1912
BmuI ACTGGG 3 cut(s) 386, 428, 521
Bpu10I CCTNAGC 2 cut(s) 163, 1943
BpuEI CTTGAG 1 cut(s) 1855
BsaAI YACGTR 1 cut(s) 1751
BsaBI GATNNNNATC 2 cut(s) 441, 893
BsaHI GRCGYC 1 cut(s) 384
BsaJI CCNNGG 2 cut(s) 659, 660
BsaWI WCCGGW 2 cut(s) 424, 862
BsaXI ACNNNNNCTCC 2 cut(s) 542, 572
Bsc4I CCNNNNNNNGG 2 cut(s) 397, 689
Bse1I ACTGG 3 cut(s) 392, 423, 516
Bse3DI GCAATG 1 cut(s) 1461
Bse8I GATNNNNATC 2 cut(s) 441, 893
BseAI TCCGGA 1 cut(s) 862
BseBI CCWGG 1 cut(s) 661
BseDI CCNNGG 2 cut(s) 659, 660
BseGI GGATG 7 cut(s) 633, 766, 1216, 1377, 1534, 1851, 1963
BseJI GATNNNNATC 2 cut(s) 441, 893
BseLI CCNNNNNNNGG 2 cut(s) 397, 689
BseMI GCAATG 1 cut(s) 1461
BseMII CTCAG 6 cut(s) 147, 177, 1146, 1227, 1358, 1545
BseNI ACTGG 3 cut(s) 392, 423, 516
BseRI GAGGAG 3 cut(s) 21, 129, 151
BseXI GCAGC 4 cut(s) 766, 1243, 1339, 1717
Bsh1236I CGCG 3 cut(s) 1109, 1857, 1970
BshFI GGCC 1 cut(s) 792
BsiHKAI GWGCWC 3 cut(s) 102, 803, 994
BsiSI CCGG 3 cut(s) 381, 425, 863
BslFI GGGAC 3 cut(s) 947, 1377, 1618
BslI CCNNNNNNNGG 2 cut(s) 397, 689
BsmAI GTCTC 2 cut(s) 276, 830
BsmBI CGTCTC 1 cut(s) 830
BsmFI GGGAC 3 cut(s) 947, 1377, 1618
BsmI GAATGC 2 cut(s) 1233, 1744
BsnI GGCC 1 cut(s) 792
Bsp1286I GDGCHC 3 cut(s) 102, 803, 994
Bsp13I TCCGGA 1 cut(s) 862
Bsp1407I TGTACA 1 cut(s) 1089
Bsp143I GATC 4 cut(s) 865, 1068, 1584, 1839
Bsp68I TCGCGA 1 cut(s) 1970
BspACI CCGC 6 cut(s) 38, 328, 331, 369, 497, 1855
BspANI GGCC 1 cut(s) 792
BspCNI CTCAG 6 cut(s) 146, 176, 1147, 1228, 1359, 1546
BspEI TCCGGA 1 cut(s) 862
BspFNI CGCG 3 cut(s) 1109, 1857, 1970
BspHI TCATGA 1 cut(s) 897
BspLI GGNNCC 4 cut(s) 240, 423, 642, 1284
BspMAI CTGCAG 2 cut(s) 321, 1357
BspPI GGATC 2 cut(s) 873, 1076
BspQI GCTCTTC 3 cut(s) 12, 340, 1019
BsrBI CCGCTC 1 cut(s) 333
BsrDI GCAATG 1 cut(s) 1461
BsrGI TGTACA 1 cut(s) 1089
BsrI ACTGG 3 cut(s) 392, 423, 516
BssECI CCNNGG 2 cut(s) 659, 660
BssMI GATC 4 cut(s) 865, 1068, 1584, 1839
BssNAI GTATAC 1 cut(s) 1410
BssNI GRCGYC 1 cut(s) 384
Bst1107I GTATAC 1 cut(s) 1410
Bst2UI CCWGG 1 cut(s) 661
Bst4CI ACNGT 3 cut(s) 56, 1220, 1714
Bst6I CTCTTC 6 cut(s) 12, 67, 228, 340, 1019, 1632
BstACI GRCGYC 1 cut(s) 384
BstAPI GCANNNNNTGC 2 cut(s) 926, 2105
BstAUI TGTACA 1 cut(s) 1089
BstBAI YACGTR 1 cut(s) 1751
BstC8I GCNNGC 6 cut(s) 308, 373, 1445, 1542, 1546, 1859
BstDEI CTNAG 9 cut(s) 113, 133, 163, 1155, 1236, 1367, 1554, 1608, 1943
BstF5I GGATG 7 cut(s) 633, 766, 1216, 1377, 1534, 1851, 1963
BstFNI CGCG 3 cut(s) 1109, 1857, 1970
BstKTI GATC 4 cut(s) 868, 1071, 1587, 1842
BstMAI GTCTC 2 cut(s) 276, 830
BstMBI GATC 4 cut(s) 865, 1068, 1584, 1839
BstMWI GCNNNNNNNGC 7 cut(s) 316, 381, 798, 926, 1358, 1463, 2105
BstNI CCWGG 1 cut(s) 661
BstNSI RCATGY 2 cut(s) 1308, 1480
BstSCI CCNGG 1 cut(s) 659
BstSFI CTRYAG 2 cut(s) 317, 1353
BstUI CGCG 3 cut(s) 1109, 1857, 1970
BstV1I GCAGC 4 cut(s) 766, 1243, 1339, 1717
BstX2I RGATCY 1 cut(s) 1068
BstYI RGATCY 1 cut(s) 1068
BstZ17I GTATAC 1 cut(s) 1410
BsuRI GGCC 1 cut(s) 792
BtrI CACGTC 1 cut(s) 876
BtsCI GGATG 7 cut(s) 633, 766, 1216, 1377, 1534, 1851, 1963
BtsI GCAGTG 1 cut(s) 922
BtsIMutI CAGTG 5 cut(s) 399, 509, 922, 1551, 1719
BtuMI TCGCGA 1 cut(s) 1970
Cac8I GCNNGC 6 cut(s) 308, 373, 1445, 1542, 1546, 1859
CciI TCATGA 1 cut(s) 897
Cfr13I GGNCC 2 cut(s) 238, 422
CseI GACGC 1 cut(s) 373
Csp6I GTAC 1 cut(s) 1090
CspCI CAANNNNNGTGG 4 cut(s) 1656, 1691, 1764, 1799
CviQI GTAC 1 cut(s) 1090
DdeI CTNAG 9 cut(s) 113, 133, 163, 1155, 1236, 1367, 1554, 1608, 1943
DpnI GATC 4 cut(s) 867, 1070, 1586, 1841
DpnII GATC 4 cut(s) 865, 1068, 1584, 1839
DrdI GACNNNNNNGTC 1 cut(s) 254
DseDI GACNNNNNNGTC 1 cut(s) 254
Eam1104I CTCTTC 6 cut(s) 12, 67, 228, 340, 1019, 1632
EarI CTCTTC 6 cut(s) 12, 67, 228, 340, 1019, 1632
Eco47I GGWCC 2 cut(s) 238, 422
Eco57I CTGAAG 2 cut(s) 1043, 1161
Eco72I CACGTG 1 cut(s) 1751
EcoO109I RGGNCCY 1 cut(s) 238
EcoRII CCWGG 1 cut(s) 659
EcoT22I ATGCAT 6 cut(s) 931, 1216, 1363, 1429, 1534, 1744
Esp3I CGTCTC 1 cut(s) 830
FaqI GGGAC 3 cut(s) 947, 1377, 1618
FauI CCCGC 1 cut(s) 45
FauNDI CATATG 1 cut(s) 1744
FbaI TGATCA 1 cut(s) 1584
FblI GTMKAC 2 cut(s) 387, 1409
Fnu4HI GCNGC 6 cut(s) 331, 497, 780, 1232, 1353, 1706
FokI GGATG 7 cut(s) 640, 773, 1223, 1384, 1541, 1838, 1970
Fsp4HI GCNGC 6 cut(s) 331, 497, 780, 1232, 1353, 1706
FspBI CTAG 1 cut(s) 486
GluI GCNGC 6 cut(s) 331, 497, 780, 1232, 1353, 1706
HaeIII GGCC 1 cut(s) 792
HapII CCGG 3 cut(s) 381, 425, 863
HgaI GACGC 1 cut(s) 373
Hin1I GRCGYC 1 cut(s) 384
HincII GTYRAC 2 cut(s) 388, 2113
HindII GTYRAC 2 cut(s) 388, 2113
HindIII AAGCTT 3 cut(s) 1250, 1455, 1940
HinfI GANTC 7 cut(s) 261, 365, 377, 431, 437, 973, 1817
HpaI GTTAAC 1 cut(s) 2113
HpaII CCGG 3 cut(s) 381, 425, 863
HphI GGTGA 2 cut(s) 596, 1624
Hpy166II GTNNAC 4 cut(s) 388, 1090, 1410, 2113
Hpy188I TCNGA 7 cut(s) 260, 276, 436, 454, 1206, 1368, 1684
Hpy188III TCNNGA 8 cut(s) 863, 898, 977, 1631, 1661, 1872, 1969, 2068
Hpy8I GTNNAC 4 cut(s) 388, 1090, 1410, 2113
Hpy99I CGWCG 1 cut(s) 389
HpyCH4III ACNGT 3 cut(s) 56, 1220, 1714
HpyCH4IV ACGT 3 cut(s) 118, 875, 1750
HpyF10VI GCNNNNNNNGC 7 cut(s) 316, 381, 798, 926, 1358, 1463, 2105
HpyF3I CTNAG 9 cut(s) 113, 133, 163, 1155, 1236, 1367, 1554, 1608, 1943
HpySE526I ACGT 3 cut(s) 118, 875, 1750
Hsp92I GRCGYC 1 cut(s) 384
Kpn2I TCCGGA 1 cut(s) 862
Ksp22I TGATCA 1 cut(s) 1584
KspAI GTTAAC 1 cut(s) 2113
Kzo9I GATC 4 cut(s) 865, 1068, 1584, 1839
LguI GCTCTTC 3 cut(s) 12, 340, 1019
LmnI GCTCC 5 cut(s) 27, 142, 164, 640, 1282
Lsp1109I GCAGC 4 cut(s) 766, 1243, 1339, 1717
LweI GCATC 6 cut(s) 808, 916, 1201, 1348, 1519, 1912
MaeI CTAG 1 cut(s) 486
MaeII ACGT 3 cut(s) 118, 875, 1750
MaeIII GTNAC 6 cut(s) 56, 652, 871, 1343, 1612, 1822
MalI GATC 4 cut(s) 867, 1070, 1586, 1841
MbiI CCGCTC 1 cut(s) 333
MboI GATC 4 cut(s) 865, 1068, 1584, 1839
MfeI CAATTG 2 cut(s) 252, 967
MflI RGATCY 1 cut(s) 1068
MhlI GDGCHC 3 cut(s) 102, 803, 994
MluI ACGCGT 1 cut(s) 1107
MlyI GAGTC 2 cut(s) 982, 1811
MmeI TCCRAC 1 cut(s) 445
Mph1103I ATGCAT 6 cut(s) 931, 1216, 1363, 1429, 1534, 1744
MroI TCCGGA 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 752
MseI TTAA 9 cut(s) 47, 729, 1100, 1176, 1197, 1493, 2013, 2040, 2112
MslI CAYNNNNRTG 2 cut(s) 1556, 1856
MspI CCGG 3 cut(s) 381, 425, 863
MspR9I CCNGG 1 cut(s) 661
MunI CAATTG 2 cut(s) 252, 967
Mva1269I GAATGC 2 cut(s) 1233, 1744
MvaI CCWGG 1 cut(s) 661
MvnI CGCG 3 cut(s) 1109, 1857, 1970
MwoI GCNNNNNNNGC 7 cut(s) 316, 381, 798, 926, 1358, 1463, 2105
NdeI CATATG 1 cut(s) 1744
NdeII GATC 4 cut(s) 865, 1068, 1584, 1839
NlaIV GGNNCC 4 cut(s) 240, 423, 642, 1284
NmuCI GTSAC 4 cut(s) 56, 871, 1343, 1612
NruI TCGCGA 1 cut(s) 1970
NsiI ATGCAT 6 cut(s) 931, 1216, 1363, 1429, 1534, 1744
NspI RCATGY 2 cut(s) 1308, 1480
PagI TCATGA 1 cut(s) 897
PasI CCCWGGG 1 cut(s) 660
PciI ACATGT 1 cut(s) 1304
PciSI GCTCTTC 3 cut(s) 12, 340, 1019
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PctI GAATGC 2 cut(s) 1233, 1744
PdmI GAANNNNTTC 1 cut(s) 752
PfeI GAWTC 5 cut(s) 261, 365, 377, 431, 437
PkrI GCNGC 6 cut(s) 332, 498, 781, 1233, 1354, 1707
PleI GAGTC 2 cut(s) 981, 1811
PmaCI CACGTG 1 cut(s) 1751
PmlI CACGTG 1 cut(s) 1751
PpsI GAGTC 2 cut(s) 981, 1811
Ppu21I YACGTR 1 cut(s) 1751
PpuMI RGGWCCY 1 cut(s) 238
PscI ACATGT 1 cut(s) 1304
PshBI ATTAAT 1 cut(s) 2013
PsiI TTATAA 2 cut(s) 774, 998
Psp5II RGGWCCY 1 cut(s) 238
Psp6I CCWGG 1 cut(s) 659
PspCI CACGTG 1 cut(s) 1751
PspGI CCWGG 1 cut(s) 659
PspN4I GGNNCC 4 cut(s) 240, 423, 642, 1284
PspPI GGNCC 2 cut(s) 238, 422
PspPPI RGGWCCY 1 cut(s) 238
PstI CTGCAG 2 cut(s) 321, 1357
PsuI RGATCY 1 cut(s) 1068
RruI TCGCGA 1 cut(s) 1970
RsaI GTAC 1 cut(s) 1091
RsaNI GTAC 1 cut(s) 1090
RseI CAYNNNNRTG 2 cut(s) 1556, 1856
SalI GTCGAC 1 cut(s) 386
SapI GCTCTTC 3 cut(s) 12, 340, 1019
SaqAI TTAA 9 cut(s) 47, 729, 1100, 1176, 1197, 1493, 2013, 2040, 2112
SatI GCNGC 6 cut(s) 331, 497, 780, 1232, 1353, 1706
Sau3AI GATC 4 cut(s) 865, 1068, 1584, 1839
Sau96I GGNCC 2 cut(s) 238, 422
SchI GAGTC 2 cut(s) 982, 1811
ScrFI CCNGG 1 cut(s) 661
SduI GDGCHC 3 cut(s) 102, 803, 994
SfaNI GCATC 6 cut(s) 808, 916, 1201, 1348, 1519, 1912
SfcI CTRYAG 2 cut(s) 317, 1353
SinI GGWCC 2 cut(s) 238, 422
SmiMI CAYNNNNRTG 2 cut(s) 1556, 1856
SmlI CTYRAG 1 cut(s) 1870
SmoI CTYRAG 1 cut(s) 1870
SsiI CCGC 6 cut(s) 38, 328, 331, 369, 497, 1855
SspI AATATT 1 cut(s) 1201
SspMI CTAG 1 cut(s) 486
StyD4I CCNGG 1 cut(s) 659
TaaI ACNGT 3 cut(s) 56, 1220, 1714
TaiI ACGT 3 cut(s) 121, 878, 1753
TaqI TCGA 2 cut(s) 387, 881
TatI WGTACW 1 cut(s) 1089
TauI GCSGC 2 cut(s) 333, 499
TfiI GAWTC 5 cut(s) 261, 365, 377, 431, 437
Tru1I TTAA 9 cut(s) 47, 729, 1100, 1176, 1197, 1493, 2013, 2040, 2112
Tru9I TTAA 9 cut(s) 47, 729, 1100, 1176, 1197, 1493, 2013, 2040, 2112
TscAI CASTG 5 cut(s) 399, 516, 922, 1558, 1719
TseFI GTSAC 4 cut(s) 56, 871, 1343, 1612
TseI GCWGC 4 cut(s) 779, 1231, 1352, 1705
Tsp45I GTSAC 4 cut(s) 56, 871, 1343, 1612
TspDTI ATGAA 8 cut(s) 237, 755, 828, 965, 1118, 1175, 1388, 1751
TspGWI ACGGA 1 cut(s) 14
TspRI CASTG 5 cut(s) 399, 516, 922, 1558, 1719
VpaK11BI GGWCC 2 cut(s) 238, 422
VspI ATTAAT 1 cut(s) 2013
XapI RAATTY 2 cut(s) 1569, 1685
XceI RCATGY 2 cut(s) 1308, 1480
XmiI GTMKAC 2 cut(s) 387, 1409
XmnI GAANNNNTTC 1 cut(s) 752
XspI CTAG 1 cut(s) 486
Zsp2I ATGCAT 6 cut(s) 931, 1216, 1363, 1429, 1534, 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.